FF:12156-128G5: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005879 | ||
| | |accession_numbers=CAGE;DRX008079;DRR008951;DRZ000376;DRZ001761;DRZ011726;DRZ013111 | ||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000076,CL:0000213,CL:0000215,CL:0000255,CL:0000077 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000099 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr2:19558373..19558392,-!p1@OSR1!1.94!225.73!OSR1;;chr11:61520075..61520136,+!p1@C11orf9!1.72!105.46!C11orf9;;chr19:58400344..58400364,-!p2@ZNF814!1.66!64.49!ZNF814;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.51!31.38!ZBED1;;chr1:151032860..151032918,+!p1@MLLT11!1.45!312.88!MLLT11;;chr4:174451370..174451387,-!p1@HAND2!1.40!24.40!HAND2;;chr7:27183263..27183284,-!p2@HOXA5!1.36!21.79!HOXA5;;chr6:126240380..126240430,+!p2@NCOA7!1.32!50.55!NCOA7;;chr18:19749541..19749557,+!p1@GATA6!1.31!59.26!GATA6;;chr18:19749386..19749404,+!p2@GATA6!1.30!27.02!GATA6;;chr8:37963466..37963506,+!p3@ASH2L!1.30!23.53!ASH2L;;chr20:6748325..6748352,+!p1@BMP2!1.28!26.15!BMP2;;chr11:32457075..32457095,-!p1@WT1!1.27!17.43!WT1;;chr1:151032922..151032951,+!p2@MLLT11!1.23!26.15!MLLT11;;chr6:28321971..28321995,-!p1@ZNF323!1.22!15.69!ZNF323;;chr7:27183291..27183324,-!p1@HOXA5!1.22!15.69!HOXA5;;chr15:83953397..83953425,-!p1@BNC1!1.21!17.43!BNC1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.20!14.82!SEBOX;;chr16:86544113..86544145,+!p1@FOXF1!1.18!17.43!FOXF1;;chr7:27153454..27153469,-!p2@HOXA3!1.17!13.94!HOXA3;;chr3:25470156..25470227,+!p2@RARB!1.12!12.20!RARB;;chr1:151032739..151032748,+!p6@MLLT11!1.11!14.82!MLLT11;;chr12:26277817..26277863,-!p2@BHLHE41!1.10!15.69!BHLHE41;;chr4:174450089..174450153,-!p2@HAND2!1.09!11.33!HAND2;;chr11:65686802..65686818,+!p6@DRAP1!1.06!18.30!DRAP1;;chr19:22193731..22193751,-!p1@ZNF208!1.06!10.46!ZNF208;;chr8:72756637..72756664,-!p3@MSC!1.04!11.33!MSC;;chr1:151032782..151032801,+!p4@MLLT11!1.02!19.17!MLLT11;;chr14:21566731..21566836,-!p1@ZNF219!1.01!100.23!ZNF219;;chr8:72756063..72756125,-!p1@MSC!1.00!18.30!MSC;;chr6:28321909..28321965,-!p3@ZNF323!0.99!8.72!ZNF323;;chr3:25469815..25469866,+!p3@RARB!0.99!8.72!RARB;;chr6:19837592..19837621,+!p1@ID4!0.95!49.68!ID4;;chr5:139492456..139492489,+!p7@PURA!0.95!7.84!PURA;;chr20:61051039..61051057,-!p1@GATA5!0.95!7.84!GATA5;;chr17:46682321..46682362,-!p1@HOXB6!0.95!7.84!HOXB6;;chr6:126240442..126240459,+!p4@NCOA7!0.93!9.59!NCOA7;;chr8:106330656..106330684,+!p1@ZFPM2!0.92!20.05!ZFPM2;;chr19:47922750..47922795,-!p1@MEIS3!0.92!12.20!MEIS3;;chr10:51572339..51572376,+!p4@NCOA4!0.91!16.56!NCOA4;;chr11:46299539..46299620,+!p2@CREB3L1!0.91!12.20!CREB3L1;;chr8:72756667..72756736,-!p2@MSC!0.91!11.33!MSC;;chr6:126240356..126240379,+!p7@NCOA7!0.91!8.72!NCOA7;;chr5:172662197..172662216,-!p1@NKX2-5!0.90!6.97!NKX2-5;;chr7:27205106..27205134,-!p2@HOXA9!0.90!6.97!HOXA9;;chr9:96717629..96717644,-!p1@BARX1!0.90!6.97!BARX1;;chr8:106330696..106330719,+!p2@ZFPM2!0.89!8.72!ZFPM2;;chr11:46299199..46299233,+!p1@CREB3L1!0.88!35.73!CREB3L1;;chr8:37963407..37963454,+!p2@ASH2L!0.87!20.05!ASH2L;;chr12:104531823..104531849,-!p5@NFYB!0.87!13.94!NFYB;;chr17:46687959..46688007,-!p2@HOXB7!0.86!8.72!HOXB7;;chr18:45663490..45663528,-!p2@ZBTB7C!0.85!6.10!ZBTB7C;;chr2:19558327..19558334,-!p2@OSR1!0.85!6.10!OSR1;;chr7:27183191..27183214,-!p4@HOXA5!0.85!6.10!HOXA5;;chr12:26277956..26277980,-!p1@BHLHE41!0.84!22.66!BHLHE41;;chr10:51572408..51572454,+!p3@NCOA4!0.83!35.73!NCOA4;;chr11:65686732..65686756,+!p2@DRAP1!0.83!26.15!DRAP1;;chr19:58400372..58400411,-!p1@ZNF814!0.81!30.50!ZNF814;;chr9:35732514..35732530,+!p5@CREB3!0.80!7.84!CREB3;;chr6:134210243..134210257,+!p1@TCF21!0.79!5.23!TCF21;;chr7:27183114..27183138,-!p3@HOXA5!0.79!5.23!HOXA5;;chr7:27183325..27183338,-!p5@HOXA5!0.79!5.23!HOXA5;;chr7:63505799..63505904,+!p1@ZNF727!0.79!5.23!ZNF727;;chr12:54402745..54402788,+!p1@HOXC8!0.79!5.23!HOXC8;;chr17:3571863..3571881,-!p1@TAX1BP3!0.78!394.80!TAX1BP3;;chr5:92918919..92918942,+!p1@NR2F1!0.78!24.40!NR2F1;;chr6:10415276..10415341,-!p2@TFAP2A!0.77!6.10!TFAP2A;;chr17:20492136..20492165,+!p1@MEIS3P2!0.76!7.84!MEIS3P2;;chr6:1312325..1312340,+!p1@FOXQ1!0.75!7.84!FOXQ1;;chr3:25469724..25469773,+!p1@RARB!0.75!6.97!RARB;;chr6:10412600..10412637,-!p1@TFAP2A!0.74!7.84!TFAP2A;;chr7:149470540..149470596,-!p2@ZNF467!0.74!6.10!ZNF467;;chr17:46622070..46622109,-!p1@HOXB2!0.73!10.46!HOXB2;;chr6:151712922..151712942,-!p6@ZBTB2!0.73!6.10!ZBTB2;;chr7:1577899..1577943,+!p3@MAFK!0.73!4.36!MAFK;;chr7:27153428..27153440,-!p3@HOXA3!0.73!4.36!HOXA3;;chr7:27170274..27170308,-!p3@HOXA4!0.73!4.36!HOXA4;;chr7:27170359..27170381,-!p1@HOXA4!0.73!4.36!HOXA4;;chr7:27224795..27224840,-!p2@HOXA11!0.73!4.36!HOXA11;;chr8:55370487..55370503,+!p1@SOX17!0.73!4.36!SOX17;;chr12:66218904..66218913,+!p11@HMGA2!0.73!4.36!HMGA2;;chr13:45150455..45150472,-!p8@TSC22D1!0.73!4.36!TSC22D1;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.73!4.36!SEBOX;;chr19:52076425..52076440,+!p2@ZNF175!0.73!4.36!ZNF175;;chr16:86600426..86600441,+!p1@FOXC2!0.72!11.33!FOXC2;;chr15:42749722..42749739,-!p2@ZFP106!0.71!7.84!ZFP106;;chr12:80085061..80085119,-!p6@PAWR!0.71!6.97!PAWR;;chr12:54447599..54447630,+!p3@HOXC4!0.71!5.23!HOXC4;;chr12:80085255..80085284,-!p9@PAWR!0.70!6.10!PAWR;;chr1:151032833..151032850,+!p3@MLLT11!0.69!9.59!MLLT11;;chr8:72756267..72756296,-!p4@MSC!0.69!6.10!MSC;;chr17:46621937..46621966,-!p2@HOXB2!0.68!11.33!HOXB2;;chr9:16870710..16870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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000077;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213 | |||
|ffid_belonging_in_development=CL:0000222 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 41: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|top_motifs= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Mesothelial%2520Cells%252c%2520donor2.CNhs12197.12156-128G5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Mesothelial%2520Cells%252c%2520donor2.CNhs12197.12156-128G5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Mesothelial%2520Cells%252c%2520donor2.CNhs12197.12156-128G5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Mesothelial%2520Cells%252c%2520donor2.CNhs12197.12156-128G5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Mesothelial%2520Cells%252c%2520donor2.CNhs12197.12156-128G5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12156-128G5 | |||
|is_a=EFO:0002091;;FF:0000099 | |||
|is_obsolete= | |||
|library_id=CNhs12197 | |||
|library_id_phase_based=2:CNhs12197 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12156 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12156 | |||
|name=Mesothelial Cells, donor2 | |||
|namespace=FANTOM5 | |||
|part_of= | |||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs12197,LSID976,release010,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.277362132193514,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.317954060866147,0,0,0,0,0,0,0,0,0.111883776727158,0,0,0,0,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.203236562094724,0,0,0,0,0,0,0.00548864014199846,0,0,0,-0.0601396529179561,0.114738710157088,0,0.651872225705914,0,0,0.174162244442278,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.21690115973835,-0.620818272853816,0,0,-0.0367311208382308,0,0,0 | |||
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| |||
|rna_box=128 | |||
|rna_catalog_number=N/A | |||
|rna_concentration=0.185 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |||
|rna_lot_number= | |||
|rna_od260/230=1.6 | |||
|rna_od260/280=2.1 | |||
|rna_position=G5 | |||
|rna_rin= | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=128G5 | |||
|rna_weight_ug=4.6 | |||
|sample_age=42 year old adult | |||
|sample_category=primary cells | |||
|sample_cell_catalog=F-MES-F | |||
|sample_cell_line= | |||
|sample_cell_lot=lot:MES042908B | |||
|sample_cell_type=mesothelial cell | |||
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest) | |||
|sample_company=Zenbio | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity=C | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.79814380276389e-232!GO:0005737;cytoplasm;3.10720464756743e-203!GO:0044444;cytoplasmic part;5.75446629390075e-156!GO:0043226;organelle;1.72246342847717e-131!GO:0043229;intracellular organelle;5.02569578134206e-131!GO:0043231;intracellular membrane-bound organelle;4.86273856351629e-128!GO:0043227;membrane-bound organelle;5.92864563253632e-128!GO:0044422;organelle part;9.86449171974579e-109!GO:0044446;intracellular organelle part;2.59690729919981e-107!GO:0032991;macromolecular complex;1.51260600004361e-75!GO:0005515;protein binding;1.96761677793593e-69!GO:0030529;ribonucleoprotein complex;3.21145054658845e-69!GO:0005739;mitochondrion;3.84991560330608e-65!GO:0031090;organelle membrane;4.11932048052854e-61!GO:0044238;primary metabolic process;2.6409746760791e-58!GO:0044237;cellular metabolic process;1.27038788240977e-57!GO:0043233;organelle lumen;1.66172839051129e-55!GO:0031974;membrane-enclosed lumen;1.66172839051129e-55!GO:0019538;protein metabolic process;6.97496471599454e-52!GO:0003723;RNA binding;1.71382411074664e-48!GO:0043170;macromolecule metabolic process;2.03255905949235e-48!GO:0009058;biosynthetic process;9.10816287200219e-46!GO:0044260;cellular macromolecule metabolic process;9.10816287200219e-46!GO:0033036;macromolecule localization;2.54817126843849e-45!GO:0005840;ribosome;7.61615573112199e-45!GO:0044267;cellular protein metabolic process;9.3851934682107e-45!GO:0044428;nuclear part;1.0209700199389e-44!GO:0044429;mitochondrial part;2.1459160162011e-44!GO:0015031;protein transport;2.30308617019246e-44!GO:0045184;establishment of protein localization;3.80524440602635e-43!GO:0006412;translation;3.89949983077615e-43!GO:0008104;protein localization;3.96509698641551e-43!GO:0005829;cytosol;1.33030982150141e-40!GO:0009059;macromolecule biosynthetic process;1.97616850119518e-39!GO:0003735;structural constituent of ribosome;5.07206727009398e-39!GO:0043234;protein complex;1.23206668126938e-37!GO:0016043;cellular component organization and biogenesis;5.61646921740373e-37!GO:0044249;cellular biosynthetic process;1.00283647379289e-36!GO:0031967;organelle envelope;1.84929179454334e-36!GO:0031975;envelope;1.9524152639614e-36!GO:0033279;ribosomal subunit;3.23293915420196e-34!GO:0046907;intracellular transport;4.99305079921476e-33!GO:0006396;RNA processing;1.65349618884412e-32!GO:0005740;mitochondrial envelope;8.14304386824571e-30!GO:0031966;mitochondrial membrane;9.55537900754049e-29!GO:0031981;nuclear lumen;1.29456950368833e-28!GO:0005783;endoplasmic reticulum;1.57414692190652e-28!GO:0006886;intracellular protein transport;2.33746552269369e-28!GO:0012505;endomembrane system;4.37009805425814e-28!GO:0016071;mRNA metabolic process;8.84245620680767e-27!GO:0019866;organelle inner membrane;2.41862864616547e-26!GO:0005743;mitochondrial inner membrane;5.26386591848554e-26!GO:0008380;RNA splicing;6.2469450410411e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.79140621970929e-24!GO:0006119;oxidative phosphorylation;2.5023633529943e-24!GO:0005634;nucleus;1.33712361191583e-23!GO:0006397;mRNA processing;1.02181983844891e-22!GO:0051649;establishment of cellular localization;1.73578544036177e-22!GO:0005794;Golgi apparatus;2.29615391191742e-22!GO:0051641;cellular localization;3.07929038396052e-22!GO:0065003;macromolecular complex assembly;5.31430331894446e-22!GO:0044445;cytosolic part;9.12908027082868e-22!GO:0006457;protein folding;1.119520484596e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.9423990192695e-21!GO:0044432;endoplasmic reticulum part;2.57526441331965e-21!GO:0044455;mitochondrial membrane part;9.25354708835663e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.204150848775e-20!GO:0016462;pyrophosphatase activity;4.80887412012665e-20!GO:0022607;cellular component assembly;6.65687987984804e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;7.40650806785744e-20!GO:0017111;nucleoside-triphosphatase activity;9.76465089624734e-19!GO:0005681;spliceosome;7.86526078415805e-18!GO:0015934;large ribosomal subunit;1.02499604110974e-17!GO:0031980;mitochondrial lumen;1.35037707923295e-17!GO:0005759;mitochondrial matrix;1.35037707923295e-17!GO:0048770;pigment granule;2.12413636824638e-17!GO:0042470;melanosome;2.12413636824638e-17!GO:0015935;small ribosomal subunit;2.12413636824638e-17!GO:0016192;vesicle-mediated transport;3.1836713197111e-17!GO:0005654;nucleoplasm;5.43258042509635e-17!GO:0043283;biopolymer metabolic process;8.42643309216887e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.55277492332619e-17!GO:0010467;gene expression;8.97396408368065e-17!GO:0005746;mitochondrial respiratory chain;9.27956545583278e-17!GO:0000502;proteasome complex (sensu Eukaryota);1.91132518502796e-16!GO:0051186;cofactor metabolic process;2.23777737702108e-16!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.47876664581027e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.22572251547143e-15!GO:0003954;NADH dehydrogenase activity;1.22572251547143e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.22572251547143e-15!GO:0005789;endoplasmic reticulum membrane;1.5826726074822e-15!GO:0006996;organelle organization and biogenesis;2.56342894320378e-15!GO:0051082;unfolded protein binding;3.53618773006077e-15!GO:0022618;protein-RNA complex assembly;3.54042474113385e-15!GO:0043228;non-membrane-bound organelle;3.54042474113385e-15!GO:0043232;intracellular non-membrane-bound organelle;3.54042474113385e-15!GO:0048193;Golgi vesicle transport;4.4551799866758e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.70504906312262e-15!GO:0044451;nucleoplasm part;1.12097623908965e-14!GO:0043285;biopolymer catabolic process;3.45283676772651e-14!GO:0044265;cellular macromolecule catabolic process;3.72078292536308e-14!GO:0008134;transcription factor binding;4.49473211748239e-14!GO:0005761;mitochondrial ribosome;5.78587697453137e-14!GO:0000313;organellar ribosome;5.78587697453137e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;7.73648041704503e-14!GO:0030964;NADH dehydrogenase complex (quinone);9.3734254278675e-14!GO:0045271;respiratory chain complex I;9.3734254278675e-14!GO:0005747;mitochondrial respiratory chain complex I;9.3734254278675e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.05225542015744e-13!GO:0042773;ATP synthesis coupled electron transport;1.05225542015744e-13!GO:0009057;macromolecule catabolic process;1.49122394957822e-13!GO:0044257;cellular protein catabolic process;1.49122394957822e-13!GO:0019941;modification-dependent protein catabolic process;1.5338491523161e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.5338491523161e-13!GO:0016874;ligase activity;1.62568307905259e-13!GO:0009055;electron carrier activity;1.67233349880594e-13!GO:0006512;ubiquitin cycle;1.75437308278306e-13!GO:0005730;nucleolus;2.13438335434273e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.36052454136543e-13!GO:0000166;nucleotide binding;2.51539367821727e-13!GO:0044248;cellular catabolic process;2.64667175473781e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.95693412846103e-13!GO:0012501;programmed cell death;3.35276965591624e-13!GO:0006605;protein targeting;3.48691706565743e-13!GO:0030163;protein catabolic process;5.0543945735179e-13!GO:0006915;apoptosis;9.8970135441173e-13!GO:0008135;translation factor activity, nucleic acid binding;1.64524270584394e-12!GO:0006732;coenzyme metabolic process;2.08425634386851e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.41709558827946e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.12917693387374e-12!GO:0043412;biopolymer modification;6.34845004933484e-12!GO:0008219;cell death;8.9703444551089e-12!GO:0016265;death;8.9703444551089e-12!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.39575133440433e-11!GO:0016491;oxidoreductase activity;1.52870646138573e-11!GO:0009259;ribonucleotide metabolic process;1.77632111746488e-11!GO:0006163;purine nucleotide metabolic process;1.87515225785097e-11!GO:0009150;purine ribonucleotide metabolic process;2.1804103353471e-11!GO:0006464;protein modification process;3.04601571302563e-11!GO:0044431;Golgi apparatus part;3.24546473270542e-11!GO:0006164;purine nucleotide biosynthetic process;1.47286129146295e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.65010270126778e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.67397453059729e-10!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.61766004279589e-10!GO:0048523;negative regulation of cellular process;2.69095854077832e-10!GO:0009199;ribonucleoside triphosphate metabolic process;3.3281851867097e-10!GO:0003924;GTPase activity;3.35713083073772e-10!GO:0005768;endosome;3.40435854534142e-10!GO:0009260;ribonucleotide biosynthetic process;3.93128831226794e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.24844321314968e-10!GO:0009144;purine nucleoside triphosphate metabolic process;4.24844321314968e-10!GO:0006413;translational initiation;4.24844321314968e-10!GO:0015986;ATP synthesis coupled proton transport;7.24220311311746e-10!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.24220311311746e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;7.61952987256009e-10!GO:0000375;RNA splicing, via transesterification reactions;7.61952987256009e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.61952987256009e-10!GO:0003743;translation initiation factor activity;8.28857495631675e-10!GO:0009141;nucleoside triphosphate metabolic process;9.10503373741212e-10!GO:0008565;protein transporter activity;9.46480785001564e-10!GO:0019829;cation-transporting ATPase activity;1.29687050714323e-09!GO:0017076;purine nucleotide binding;1.38887139099779e-09!GO:0032553;ribonucleotide binding;1.57429518698443e-09!GO:0032555;purine ribonucleotide binding;1.57429518698443e-09!GO:0003712;transcription cofactor activity;1.63225383055623e-09!GO:0009142;nucleoside triphosphate biosynthetic process;1.92432326260509e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.92432326260509e-09!GO:0008639;small protein conjugating enzyme activity;2.33403107509421e-09!GO:0046034;ATP metabolic process;2.3445235044116e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.46356499509789e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.46356499509789e-09!GO:0000139;Golgi membrane;3.4249848855577e-09!GO:0031988;membrane-bound vesicle;3.60402437287818e-09!GO:0006446;regulation of translational initiation;3.86525238358455e-09!GO:0016023;cytoplasmic membrane-bound vesicle;4.1874227275325e-09!GO:0005793;ER-Golgi intermediate compartment;4.58764748350878e-09!GO:0004842;ubiquitin-protein ligase activity;4.83933900164044e-09!GO:0048519;negative regulation of biological process;6.95894290762826e-09!GO:0016887;ATPase activity;8.58582738597171e-09!GO:0009056;catabolic process;8.71221833301045e-09!GO:0019787;small conjugating protein ligase activity;9.46938221993603e-09!GO:0006461;protein complex assembly;1.07053146158738e-08!GO:0043067;regulation of programmed cell death;1.07102221209946e-08!GO:0006754;ATP biosynthetic process;1.09626505197936e-08!GO:0006753;nucleoside phosphate metabolic process;1.09626505197936e-08!GO:0005773;vacuole;1.18652808882533e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.30742143281203e-08!GO:0030120;vesicle coat;1.64417940206777e-08!GO:0030662;coated vesicle membrane;1.64417940206777e-08!GO:0042981;regulation of apoptosis;1.65389123752114e-08!GO:0042623;ATPase activity, coupled;1.70191599982194e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.14867053382703e-08!GO:0006091;generation of precursor metabolites and energy;2.59082278790381e-08!GO:0043069;negative regulation of programmed cell death;2.91174738313945e-08!GO:0048475;coated membrane;3.50005050876546e-08!GO:0030117;membrane coat;3.50005050876546e-08!GO:0051188;cofactor biosynthetic process;3.51285682320187e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.84146771499888e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.20189082892788e-08!GO:0031982;vesicle;6.13959730599519e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.19210517012973e-08!GO:0005635;nuclear envelope;6.71730189888133e-08!GO:0005770;late endosome;6.92605099748101e-08!GO:0016881;acid-amino acid ligase activity;7.46591294813178e-08!GO:0043066;negative regulation of apoptosis;8.03858364102531e-08!GO:0031410;cytoplasmic vesicle;9.5727818673535e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.21435125866365e-07!GO:0009060;aerobic respiration;1.50412030024567e-07!GO:0043687;post-translational protein modification;1.52453769717359e-07!GO:0005788;endoplasmic reticulum lumen;1.61355152199372e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.65700455216931e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.04529259717688e-07!GO:0016604;nuclear body;2.6792256962761e-07!GO:0031965;nuclear membrane;3.50153584386852e-07!GO:0009117;nucleotide metabolic process;3.82397191409975e-07!GO:0042254;ribosome biogenesis and assembly;3.96219081007137e-07!GO:0000323;lytic vacuole;4.34734146404796e-07!GO:0005764;lysosome;4.34734146404796e-07!GO:0006916;anti-apoptosis;4.73934803203564e-07!GO:0016787;hydrolase activity;4.7844485323934e-07!GO:0051246;regulation of protein metabolic process;5.00742129433729e-07!GO:0045333;cellular respiration;5.04250428893268e-07!GO:0031252;leading edge;5.08420813206936e-07!GO:0006913;nucleocytoplasmic transport;5.14471662287712e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.22974477520663e-07!GO:0005525;GTP binding;6.06919672841559e-07!GO:0044440;endosomal part;7.34064563411897e-07!GO:0010008;endosome membrane;7.34064563411897e-07!GO:0006399;tRNA metabolic process;7.52687277526119e-07!GO:0051789;response to protein stimulus;8.41652361551599e-07!GO:0006986;response to unfolded protein;8.41652361551599e-07!GO:0006099;tricarboxylic acid cycle;8.96455470351672e-07!GO:0046356;acetyl-CoA catabolic process;8.96455470351672e-07!GO:0051169;nuclear transport;9.53638416548957e-07!GO:0017038;protein import;1.11942429182201e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.57950926456937e-06!GO:0051187;cofactor catabolic process;1.60224327182499e-06!GO:0009108;coenzyme biosynthetic process;2.35753033074439e-06!GO:0006084;acetyl-CoA metabolic process;2.61258686785657e-06!GO:0005905;coated pit;2.8821799983882e-06!GO:0005798;Golgi-associated vesicle;3.00060797207801e-06!GO:0045259;proton-transporting ATP synthase complex;3.08435194811693e-06!GO:0006752;group transfer coenzyme metabolic process;3.13075408641812e-06!GO:0003714;transcription corepressor activity;3.69165084573065e-06!GO:0044453;nuclear membrane part;3.73179268760948e-06!GO:0007005;mitochondrion organization and biogenesis;4.22613988458871e-06!GO:0004298;threonine endopeptidase activity;4.94810834690443e-06!GO:0006259;DNA metabolic process;5.0105030899583e-06!GO:0032561;guanyl ribonucleotide binding;5.82619157269111e-06!GO:0019001;guanyl nucleotide binding;5.82619157269111e-06!GO:0030532;small nuclear ribonucleoprotein complex;5.96884829610075e-06!GO:0005524;ATP binding;6.7670023366687e-06!GO:0008654;phospholipid biosynthetic process;6.9905922554634e-06!GO:0016740;transferase activity;7.94590027750376e-06!GO:0009109;coenzyme catabolic process;8.26892114908643e-06!GO:0016607;nuclear speck;8.78150925822941e-06!GO:0065002;intracellular protein transport across a membrane;8.80472136850761e-06!GO:0032559;adenyl ribonucleotide binding;9.21963082998566e-06!GO:0045786;negative regulation of progression through cell cycle;9.21963082998566e-06!GO:0030554;adenyl nucleotide binding;9.37925408374695e-06!GO:0008026;ATP-dependent helicase activity;1.06192453079398e-05!GO:0031968;organelle outer membrane;1.1684882401976e-05!GO:0006613;cotranslational protein targeting to membrane;1.23892494202645e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.28884827802982e-05!GO:0015399;primary active transmembrane transporter activity;1.28884827802982e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.33083695967148e-05!GO:0016853;isomerase activity;1.44963591896343e-05!GO:0007049;cell cycle;1.46673191725125e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.6816054804691e-05!GO:0004812;aminoacyl-tRNA ligase activity;1.6816054804691e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.6816054804691e-05!GO:0045454;cell redox homeostasis;2.12305204869868e-05!GO:0019867;outer membrane;2.2113640037278e-05!GO:0044262;cellular carbohydrate metabolic process;2.35501029840742e-05!GO:0007243;protein kinase cascade;2.4168643222412e-05!GO:0043038;amino acid activation;2.61052223559917e-05!GO:0006418;tRNA aminoacylation for protein translation;2.61052223559917e-05!GO:0043039;tRNA aminoacylation;2.61052223559917e-05!GO:0000151;ubiquitin ligase complex;2.83199643613616e-05!GO:0030867;rough endoplasmic reticulum membrane;3.18784962780805e-05!GO:0005762;mitochondrial large ribosomal subunit;3.27680324999899e-05!GO:0000315;organellar large ribosomal subunit;3.27680324999899e-05!GO:0051726;regulation of cell cycle;4.14666902122201e-05!GO:0006612;protein targeting to membrane;4.1600794268046e-05!GO:0000074;regulation of progression through cell cycle;4.46365924689566e-05!GO:0016044;membrane organization and biogenesis;4.59456581168788e-05!GO:0005667;transcription factor complex;5.76845012105075e-05!GO:0000245;spliceosome assembly;6.37170709648919e-05!GO:0005643;nuclear pore;6.76746886515545e-05!GO:0015980;energy derivation by oxidation of organic compounds;6.94534471080256e-05!GO:0005741;mitochondrial outer membrane;7.14549766603063e-05!GO:0005791;rough endoplasmic reticulum;7.98495078850221e-05!GO:0030659;cytoplasmic vesicle membrane;8.14393334324794e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.15444956989401e-05!GO:0004386;helicase activity;8.73283189100565e-05!GO:0008610;lipid biosynthetic process;9.27602105491948e-05!GO:0016126;sterol biosynthetic process;9.28918027239537e-05!GO:0016564;transcription repressor activity;0.000105346754039534!GO:0030133;transport vesicle;0.000115590143922586!GO:0005769;early endosome;0.000117883096566755!GO:0006793;phosphorus metabolic process;0.000119778302158905!GO:0006796;phosphate metabolic process;0.000119778302158905!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000123185470239831!GO:0006364;rRNA processing;0.000128307940321343!GO:0016567;protein ubiquitination;0.000136586155861061!GO:0043623;cellular protein complex assembly;0.000136882811323405!GO:0033116;ER-Golgi intermediate compartment membrane;0.000138625402562108!GO:0016072;rRNA metabolic process;0.000140089733690851!GO:0030036;actin cytoskeleton organization and biogenesis;0.00015209782843543!GO:0016859;cis-trans isomerase activity;0.00016124876761225!GO:0003713;transcription coactivator activity;0.000168862205780493!GO:0043492;ATPase activity, coupled to movement of substances;0.000169567887649678!GO:0008092;cytoskeletal protein binding;0.000172781251871759!GO:0046930;pore complex;0.000188783288371217!GO:0016779;nucleotidyltransferase activity;0.000191424728427839!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000199305327791251!GO:0044433;cytoplasmic vesicle part;0.000200625630137708!GO:0048522;positive regulation of cellular process;0.000204579562065357!GO:0008361;regulation of cell size;0.000204625726524588!GO:0009165;nucleotide biosynthetic process;0.000204625726524588!GO:0032446;protein modification by small protein conjugation;0.000212350915589052!GO:0003724;RNA helicase activity;0.000213288394347016!GO:0006818;hydrogen transport;0.000217237095218189!GO:0000314;organellar small ribosomal subunit;0.000224011327915784!GO:0005763;mitochondrial small ribosomal subunit;0.000224011327915784!GO:0022890;inorganic cation transmembrane transporter activity;0.000229792169015885!GO:0015992;proton transport;0.000251834959408157!GO:0046474;glycerophospholipid biosynthetic process;0.000275656040272445!GO:0005885;Arp2/3 protein complex;0.000299411407632455!GO:0005048;signal sequence binding;0.000333389892099795!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000350117755152196!GO:0016049;cell growth;0.000358187380404607!GO:0008250;oligosaccharyl transferase complex;0.000378816928009147!GO:0016310;phosphorylation;0.000380472913904442!GO:0012506;vesicle membrane;0.000389666057189867!GO:0006974;response to DNA damage stimulus;0.000411355124650548!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000411355124650548!GO:0031072;heat shock protein binding;0.000415125650062959!GO:0004576;oligosaccharyl transferase activity;0.000419021433703979!GO:0030027;lamellipodium;0.000443540149525393!GO:0006366;transcription from RNA polymerase II promoter;0.000461933944498882!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000483431337778601!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000492778380897153!GO:0007264;small GTPase mediated signal transduction;0.000494480658457888!GO:0043681;protein import into mitochondrion;0.000494480658457888!GO:0046467;membrane lipid biosynthetic process;0.000517346534719959!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000534419699906737!GO:0051170;nuclear import;0.000675590200097106!GO:0030029;actin filament-based process;0.00067743486061419!GO:0001558;regulation of cell growth;0.000723716289828304!GO:0003899;DNA-directed RNA polymerase activity;0.000723716289828304!GO:0030118;clathrin coat;0.00075625239585287!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000811134118035895!GO:0009967;positive regulation of signal transduction;0.00082812540489657!GO:0051920;peroxiredoxin activity;0.00082812540489657!GO:0031902;late endosome membrane;0.000830291232539542!GO:0018196;peptidyl-asparagine modification;0.000914199230672369!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000914199230672369!GO:0016563;transcription activator activity;0.000933166222241957!GO:0022402;cell cycle process;0.000952282200656799!GO:0006118;electron transport;0.00096211375372113!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000973892837360236!GO:0001726;ruffle;0.000980726260547277!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000984517446899978!GO:0043021;ribonucleoprotein binding;0.000984711455061255!GO:0006606;protein import into nucleus;0.00101224375889393!GO:0030658;transport vesicle membrane;0.0010219756091001!GO:0030663;COPI coated vesicle membrane;0.00109496887956091!GO:0030126;COPI vesicle coat;0.00109496887956091!GO:0006695;cholesterol biosynthetic process;0.00113233415997943!GO:0006403;RNA localization;0.00116278704476132!GO:0030176;integral to endoplasmic reticulum membrane;0.00124930270684011!GO:0050657;nucleic acid transport;0.00124930270684011!GO:0051236;establishment of RNA localization;0.00124930270684011!GO:0050658;RNA transport;0.00124930270684011!GO:0048468;cell development;0.00126783720311667!GO:0045045;secretory pathway;0.0013337251358815!GO:0048471;perinuclear region of cytoplasm;0.00139752165695556!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00143131990401072!GO:0046489;phosphoinositide biosynthetic process;0.00149610506787257!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00163637659293771!GO:0030119;AP-type membrane coat adaptor complex;0.00172370920041498!GO:0006082;organic acid metabolic process;0.00186031219556349!GO:0032940;secretion by cell;0.00194882478048494!GO:0016070;RNA metabolic process;0.00195276054310407!GO:0019752;carboxylic acid metabolic process;0.00196926431541468!GO:0008186;RNA-dependent ATPase activity;0.00204171693036158!GO:0030137;COPI-coated vesicle;0.00211520500185342!GO:0051427;hormone receptor binding;0.00212111566840062!GO:0006626;protein targeting to mitochondrion;0.00227725897969354!GO:0030132;clathrin coat of coated pit;0.00227725897969354!GO:0006839;mitochondrial transport;0.00227725897969354!GO:0005774;vacuolar membrane;0.00227725897969354!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0023042473416694!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0023042473416694!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0023042473416694!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00236470948526635!GO:0016568;chromatin modification;0.00246462692303052!GO:0007040;lysosome organization and biogenesis;0.00271482526992793!GO:0006281;DNA repair;0.00285456297803102!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00286567188572761!GO:0044255;cellular lipid metabolic process;0.0028824945999813!GO:0006979;response to oxidative stress;0.00288473682706204!GO:0016197;endosome transport;0.00291128287183988!GO:0006897;endocytosis;0.00292080620238186!GO:0010324;membrane invagination;0.00292080620238186!GO:0030131;clathrin adaptor complex;0.00293680089717591!GO:0050794;regulation of cellular process;0.00294868806804621!GO:0006509;membrane protein ectodomain proteolysis;0.00296986596389547!GO:0033619;membrane protein proteolysis;0.00296986596389547!GO:0030660;Golgi-associated vesicle membrane;0.00300084020836237!GO:0048487;beta-tubulin binding;0.00301774296952065!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00301930552856441!GO:0006650;glycerophospholipid metabolic process;0.00317505867517978!GO:0042802;identical protein binding;0.0032507232061081!GO:0046519;sphingoid metabolic process;0.00325140716282014!GO:0043284;biopolymer biosynthetic process;0.00326687846243066!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00330064407624659!GO:0006383;transcription from RNA polymerase III promoter;0.00335701228110502!GO:0019899;enzyme binding;0.00335703893310517!GO:0048500;signal recognition particle;0.00357358843733146!GO:0006672;ceramide metabolic process;0.00357578358633146!GO:0035257;nuclear hormone receptor binding;0.00358957629794948!GO:0030125;clathrin vesicle coat;0.00361799575490307!GO:0030665;clathrin coated vesicle membrane;0.00361799575490307!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00362576287065953!GO:0065009;regulation of a molecular function;0.00372083107078936!GO:0006414;translational elongation;0.00384825484871085!GO:0006891;intra-Golgi vesicle-mediated transport;0.00387585197075153!GO:0003711;transcription elongation regulator activity;0.00437244156605511!GO:0003697;single-stranded DNA binding;0.00444934315595539!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00445023420581661!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00445023420581661!GO:0022406;membrane docking;0.00450073453817633!GO:0048278;vesicle docking;0.00450073453817633!GO:0031324;negative regulation of cellular metabolic process;0.00450073453817633!GO:0004004;ATP-dependent RNA helicase activity;0.00477080546123619!GO:0007033;vacuole organization and biogenesis;0.00489203590485801!GO:0006904;vesicle docking during exocytosis;0.00489203590485801!GO:0051287;NAD binding;0.00507313835426933!GO:0008243;plasminogen activator activity;0.00511417060872966!GO:0031418;L-ascorbic acid binding;0.00516941517257985!GO:0050662;coenzyme binding;0.00535580366850816!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00542612789271616!GO:0045047;protein targeting to ER;0.00542612789271616!GO:0019843;rRNA binding;0.00544963664658029!GO:0044437;vacuolar part;0.00550019658077921!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00550548902731955!GO:0008632;apoptotic program;0.00550548902731955!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00558839438622557!GO:0015002;heme-copper terminal oxidase activity;0.00558839438622557!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00558839438622557!GO:0004129;cytochrome-c oxidase activity;0.00558839438622557!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00596255130736024!GO:0007006;mitochondrial membrane organization and biogenesis;0.00603513326890235!GO:0008180;signalosome;0.00606968879217834!GO:0007050;cell cycle arrest;0.00625381796533834!GO:0006778;porphyrin metabolic process;0.00640255756516109!GO:0033013;tetrapyrrole metabolic process;0.00640255756516109!GO:0051168;nuclear export;0.00643956198099924!GO:0006323;DNA packaging;0.00675925084134845!GO:0030880;RNA polymerase complex;0.00683190396407924!GO:0009719;response to endogenous stimulus;0.00686188446768481!GO:0030134;ER to Golgi transport vesicle;0.0069006727223745!GO:0008312;7S RNA binding;0.00718208129605396!GO:0035258;steroid hormone receptor binding;0.00748227244257808!GO:0051087;chaperone binding;0.00770378028892632!GO:0048518;positive regulation of biological process;0.00828991218598776!GO:0005765;lysosomal membrane;0.00858786382536336!GO:0016408;C-acyltransferase activity;0.00894530739844714!GO:0030145;manganese ion binding;0.0089927370668228!GO:0043566;structure-specific DNA binding;0.00902933915413745!GO:0017166;vinculin binding;0.00953334418728236!GO:0006892;post-Golgi vesicle-mediated transport;0.00958118894591281!GO:0030384;phosphoinositide metabolic process;0.00959835210254524!GO:0043433;negative regulation of transcription factor activity;0.00960589646329266!GO:0051028;mRNA transport;0.00961789994162655!GO:0003676;nucleic acid binding;0.00975618737650023!GO:0042168;heme metabolic process;0.00991367814523743!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00991367814523743!GO:0005869;dynactin complex;0.0105255277729802!GO:0003729;mRNA binding;0.0106240728430777!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0110687719704346!GO:0050811;GABA receptor binding;0.0116363214710675!GO:0006595;polyamine metabolic process;0.0123050807860294!GO:0008033;tRNA processing;0.0124182677742168!GO:0009892;negative regulation of metabolic process;0.0124987507418555!GO:0030127;COPII vesicle coat;0.0125154505802272!GO:0012507;ER to Golgi transport vesicle membrane;0.0125154505802272!GO:0005975;carbohydrate metabolic process;0.0130974042677663!GO:0008047;enzyme activator activity;0.0132829070619374!GO:0004197;cysteine-type endopeptidase activity;0.013425449549139!GO:0003746;translation elongation factor activity;0.0135754515044427!GO:0046483;heterocycle metabolic process;0.013993019212081!GO:0016125;sterol metabolic process;0.0143982727420177!GO:0016860;intramolecular oxidoreductase activity;0.0146514201598724!GO:0016272;prefoldin complex;0.0146958539332838!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0147483454332911!GO:0000428;DNA-directed RNA polymerase complex;0.0147483454332911!GO:0030521;androgen receptor signaling pathway;0.015232556811103!GO:0031543;peptidyl-proline dioxygenase activity;0.0152673831931854!GO:0005862;muscle thin filament tropomyosin;0.0155725526970051!GO:0008320;protein transmembrane transporter activity;0.0157243378063521!GO:0006506;GPI anchor biosynthetic process;0.0165478471287482!GO:0051252;regulation of RNA metabolic process;0.0165776141445736!GO:0015631;tubulin binding;0.017084050810333!GO:0000030;mannosyltransferase activity;0.017084050810333!GO:0031301;integral to organelle membrane;0.0171813887914738!GO:0008022;protein C-terminus binding;0.0177646720587797!GO:0008139;nuclear localization sequence binding;0.0178680073719293!GO:0006643;membrane lipid metabolic process;0.0178680073719293!GO:0006740;NADPH regeneration;0.0181616425477617!GO:0006098;pentose-phosphate shunt;0.0181616425477617!GO:0006417;regulation of translation;0.0190415889091723!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0196103720872454!GO:0007030;Golgi organization and biogenesis;0.0196156019129499!GO:0051540;metal cluster binding;0.0196860371386047!GO:0051536;iron-sulfur cluster binding;0.0196860371386047!GO:0040008;regulation of growth;0.019769924519118!GO:0050681;androgen receptor binding;0.019769924519118!GO:0006629;lipid metabolic process;0.019769924519118!GO:0006497;protein amino acid lipidation;0.0199433485967001!GO:0019798;procollagen-proline dioxygenase activity;0.0200497201407627!GO:0006739;NADP metabolic process;0.0204668748911125!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0204805856488668!GO:0006790;sulfur metabolic process;0.0208580033835251!GO:0045792;negative regulation of cell size;0.0210537497931968!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0211001782052765!GO:0030308;negative regulation of cell growth;0.0212266796212446!GO:0051101;regulation of DNA binding;0.0217859178210771!GO:0033673;negative regulation of kinase activity;0.0217859178210771!GO:0006469;negative regulation of protein kinase activity;0.0217859178210771!GO:0044452;nucleolar part;0.0217859178210771!GO:0030031;cell projection biogenesis;0.0222209215067877!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0224860586852721!GO:0005832;chaperonin-containing T-complex;0.0229054042931608!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0229054042931608!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0229054042931608!GO:0051329;interphase of mitotic cell cycle;0.0229054042931608!GO:0009100;glycoprotein metabolic process;0.0235283253186828!GO:0006665;sphingolipid metabolic process;0.0235720316370072!GO:0007034;vacuolar transport;0.0236831473834575!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0237944988770971!GO:0006769;nicotinamide metabolic process;0.024001964891175!GO:0008538;proteasome activator activity;0.0252018768931426!GO:0030518;steroid hormone receptor signaling pathway;0.0257400197089507!GO:0042158;lipoprotein biosynthetic process;0.0259600361306518!GO:0003779;actin binding;0.0265096844299146!GO:0031625;ubiquitin protein ligase binding;0.0265274650484607!GO:0065004;protein-DNA complex assembly;0.0265274650484607!GO:0007242;intracellular signaling cascade;0.0269003955107593!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0271455779938636!GO:0005684;U2-dependent spliceosome;0.0272135592312446!GO:0043488;regulation of mRNA stability;0.0273868281360302!GO:0043487;regulation of RNA stability;0.0273868281360302!GO:0051539;4 iron, 4 sulfur cluster binding;0.0279306595277374!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0283980222810943!GO:0004287;prolyl oligopeptidase activity;0.0284161680927605!GO:0030503;regulation of cell redox homeostasis;0.0284161680927605!GO:0006007;glucose catabolic process;0.0284904063871539!GO:0007010;cytoskeleton organization and biogenesis;0.0291966126014812!GO:0006354;RNA elongation;0.0296642667917598!GO:0006779;porphyrin biosynthetic process;0.0302570180793708!GO:0033014;tetrapyrrole biosynthetic process;0.0302570180793708!GO:0043022;ribosome binding;0.0306514772491435!GO:0048144;fibroblast proliferation;0.0309646430314915!GO:0048145;regulation of fibroblast proliferation;0.0309646430314915!GO:0006402;mRNA catabolic process;0.0310777304786837!GO:0016363;nuclear matrix;0.0320410777880069!GO:0035035;histone acetyltransferase binding;0.0320410777880069!GO:0000096;sulfur amino acid metabolic process;0.0331181320294028!GO:0006458;'de novo' protein folding;0.0333530588549243!GO:0051084;'de novo' posttranslational protein folding;0.0333530588549243!GO:0051059;NF-kappaB binding;0.033980091255741!GO:0008154;actin polymerization and/or depolymerization;0.0342076909681622!GO:0008484;sulfuric ester hydrolase activity;0.0342689598168289!GO:0004177;aminopeptidase activity;0.0343939335903686!GO:0060166;olfactory pit development;0.0344674932910227!GO:0021768;nucleus accumbens development;0.0344674932910227!GO:0002072;optic cup morphogenesis involved in camera-type eye development;0.0344674932910227!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0345303702276558!GO:0032984;macromolecular complex disassembly;0.0347643520847239!GO:0030140;trans-Golgi network transport vesicle;0.034775130847865!GO:0006352;transcription initiation;0.0347758306362697!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0349996725599573!GO:0033043;regulation of organelle organization and biogenesis;0.0349996725599573!GO:0006611;protein export from nucleus;0.0357161397256937!GO:0001516;prostaglandin biosynthetic process;0.0358138181175351!GO:0046457;prostanoid biosynthetic process;0.0358138181175351!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0358685345294724!GO:0005777;peroxisome;0.0359388912911717!GO:0042579;microbody;0.0359388912911717!GO:0006635;fatty acid beta-oxidation;0.0359388912911717!GO:0005853;eukaryotic translation elongation factor 1 complex;0.036002468820068!GO:0006487;protein amino acid N-linked glycosylation;0.036612400737677!GO:0051325;interphase;0.0366937400307946!GO:0043065;positive regulation of apoptosis;0.0368139989746522!GO:0000339;RNA cap binding;0.0379455348423207!GO:0051348;negative regulation of transferase activity;0.0379686406909414!GO:0000209;protein polyubiquitination;0.0382057510768324!GO:0000049;tRNA binding;0.0385400708670888!GO:0043068;positive regulation of programmed cell death;0.0388706908308307!GO:0008234;cysteine-type peptidase activity;0.038916512177524!GO:0043624;cellular protein complex disassembly;0.0391247499733784!GO:0030508;thiol-disulfide exchange intermediate activity;0.039624307472163!GO:0015630;microtubule cytoskeleton;0.039952034083857!GO:0006733;oxidoreduction coenzyme metabolic process;0.0400595571571768!GO:0050789;regulation of biological process;0.0403584151757146!GO:0006693;prostaglandin metabolic process;0.0409128785389737!GO:0006692;prostanoid metabolic process;0.0409128785389737!GO:0006505;GPI anchor metabolic process;0.0410052803804546!GO:0030032;lamellipodium biogenesis;0.0410787738104951!GO:0051098;regulation of binding;0.0413358016450824!GO:0031994;insulin-like growth factor I binding;0.041501453381372!GO:0031995;insulin-like growth factor II binding;0.041501453381372!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0418336548646893!GO:0031970;organelle envelope lumen;0.0419226322771511!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0441353589855153!GO:0048037;cofactor binding;0.0441701064888392!GO:0005784;translocon complex;0.0443460385486245!GO:0006333;chromatin assembly or disassembly;0.0443460385486245!GO:0006518;peptide metabolic process;0.0457717608101691!GO:0006783;heme biosynthetic process;0.0457717608101691!GO:0051270;regulation of cell motility;0.0457717608101691!GO:0031901;early endosome membrane;0.0457717608101691!GO:0045334;clathrin-coated endocytic vesicle;0.0465043930802989!GO:0007021;tubulin folding;0.0473321931336647!GO:0003923;GPI-anchor transamidase activity;0.0480191800706828!GO:0016255;attachment of GPI anchor to protein;0.0480191800706828!GO:0042765;GPI-anchor transamidase complex;0.0480191800706828!GO:0004722;protein serine/threonine phosphatase activity;0.0480663799837509!GO:0006767;water-soluble vitamin metabolic process;0.0484364656222022!GO:0030911;TPR domain binding;0.0490757442335172!GO:0051128;regulation of cellular component organization and biogenesis;0.0495939041403395 | |||
|sample_id=12156 | |||
|sample_note= | |||
|sample_sex=female | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=mesothelium | |||
|top_motifs=HOX{A5,B5}:1.98951998907;GZF1:1.6903782582;CRX:1.51404663009;NR3C1:1.45008734165;ONECUT1,2:1.27792238921;HSF1,2:1.26721948459;NKX3-1:1.19681282656;TFCP2:1.18819755956;MAFB:1.10071898097;GCM1,2:1.09852566397;ZBTB6:1.07941991073;PPARG:1.06405590578;NFE2L2:1.02476358326;POU1F1:0.998864633034;ESRRA:0.995998289215;ADNP_IRX_SIX_ZHX:0.970265544283;EBF1:0.96494803203;NFE2L1:0.936080183618;TAL1_TCF{3,4,12}:0.934513707648;bHLH_family:0.91636009015;JUN:0.911445850475;TEAD1:0.882116483044;HOX{A6,A7,B6,B7}:0.876599988189;SRF:0.874543849307;NFATC1..3:0.841895012349;GTF2A1,2:0.835087998882;ZNF148:0.805572675519;GLI1..3:0.795537714788;PAX1,9:0.774936065951;MYBL2:0.750514140849;TEF:0.691191608407;EN1,2:0.680417212073;HOX{A4,D4}:0.665585509988;TLX1..3_NFIC{dimer}:0.664206633329;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.652467528317;SMAD1..7,9:0.640521559109;LEF1_TCF7_TCF7L1,2:0.635725546855;NKX3-2:0.624699498357;MYOD1:0.618181515924;TP53:0.604667649756;MAZ:0.59657722648;NR1H4:0.594570205537;FOSL2:0.549435473624;BACH2:0.544305023377;SPZ1:0.543148414374;PRRX1,2:0.542635017829;NHLH1,2:0.495454765408;TBP:0.487325573469;GTF2I:0.486001365922;PAX5:0.461303279373;HLF:0.442643707757;NR6A1:0.436513635836;NFIX:0.436459966504;LMO2:0.400199240228;ATF6:0.396836986892;SREBF1,2:0.389697431945;NFE2:0.38954038364;AIRE:0.387950528608;HES1:0.38158040514;ELK1,4_GABP{A,B1}:0.374032545267;ZNF238:0.369212701891;PAX6:0.368784015467;HMX1:0.367599292025;SOX5:0.362544725441;NANOG:0.35095428651;GATA6:0.347545278144;XCPE1{core}:0.347009014202;TBX4,5:0.346817059839;HAND1,2:0.340984442935;HIC1:0.339323491227;HIF1A:0.313070841871;XBP1:0.312871074262;SOX2:0.29034281674;EGR1..3:0.289538986826;ZIC1..3:0.286729841523;NFIL3:0.286495690307;MTE{core}:0.28087556425;FOX{I1,J2}:0.265288603524;RXR{A,B,G}:0.246411301198;PAX4:0.217950476728;SP1:0.20682697598;PRDM1:0.195035335088;HNF1A:0.185615232933;TFAP4:0.182200165391;MEF2{A,B,C,D}:0.177315849433;GFI1B:0.170865676202;FOS_FOS{B,L1}_JUN{B,D}:0.166829352887;TFAP2{A,C}:0.155744427;HBP1_HMGB_SSRP1_UBTF:0.153498163133;MZF1:0.1503453992;STAT2,4,6:0.148571362111;FOX{D1,D2}:0.140629592818;IKZF1:0.12876985964;PATZ1:0.116525498206;SOX17:0.114375893242;TFAP2B:0.106137894958;STAT5{A,B}:0.102166711565;DBP:0.0972345552744;FOXA2:0.0701135301615;POU6F1:0.0612046684215;EVI1:0.0526414397917;ALX4:0.0343640891717;REST:0.00255243925396;IRF7:-0.00172096180043;TGIF1:-0.00235348532486;ZNF423:-0.00480554631829;ZNF143:-0.00717179568161;MTF1:-0.0243934762927;AR:-0.0254969098191;KLF4:-0.028852706271;PAX2:-0.0316314257292;NKX2-3_NKX2-5:-0.0463686209458;ZNF384:-0.0520171890729;HNF4A_NR2F1,2:-0.0548997830946;POU3F1..4:-0.0649149947429;ZFP161:-0.0835839169651;RFX1:-0.0942169991687;ATF2:-0.0972622646691;SNAI1..3:-0.102218478403;HOXA9_MEIS1:-0.125585752172;IRF1,2:-0.141962612884;FOXP3:-0.159517507427;MYFfamily:-0.164696800022;NFKB1_REL_RELA:-0.165173363512;ESR1:-0.167936357278;MED-1{core}:-0.175884884179;CEBPA,B_DDIT3:-0.200221239279;UFEwm:-0.211754406384;ETS1,2:-0.220800789263;RUNX1..3:-0.234568396732;STAT1,3:-0.266032256621;RREB1:-0.266819336974;NKX2-1,4:-0.275788686558;FOXN1:-0.282015987816;FOXO1,3,4:-0.28444206439;ALX1:-0.285049408303;PBX1:-0.292581050826;NANOG{mouse}:-0.296083440908;EP300:-0.335143909885;ARID5B:-0.357584470514;CDC5L:-0.359899304075;OCT4_SOX2{dimer}:-0.374406375898;DMAP1_NCOR{1,2}_SMARC:-0.390888684326;FOX{F1,F2,J1}:-0.3966902242;ZBTB16:-0.427413906929;RORA:-0.433620319848;NR5A1,2:-0.433994068344;SPIB:-0.466288985732;SPI1:-0.467762194472;NRF1:-0.469689234254;ZEB1:-0.484480393273;CUX2:-0.485305753271;RFX2..5_RFXANK_RFXAP:-0.498118509045;T:-0.526663636732;TLX2:-0.546231556151;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.5492876234;FOXM1:-0.574869669652;PAX8:-0.588349556426;ELF1,2,4:-0.598855366793;ATF5_CREB3:-0.600889851865;TOPORS:-0.605401243191;LHX3,4:-0.661695473074;FOXQ1:-0.686288477486;HMGA1,2:-0.706293675356;NFY{A,B,C}:-0.741048560132;SOX{8,9,10}:-0.74327415848;PAX3,7:-0.776046672213;PDX1:-0.777774203035;RXRA_VDR{dimer}:-0.787087796222;YY1:-0.802941161991;AHR_ARNT_ARNT2:-0.814986069585;NKX2-2,8:-0.955347508826;CREB1:-0.963522276627;CDX1,2,4:-0.971054139691;VSX1,2:-1.00305848481;GATA4:-1.00486030698;RBPJ:-1.06203433221;ATF4:-1.06941955272;POU2F1..3:-1.09252059055;POU5F1:-1.11453814956;PITX1..3:-1.23408575257;FOXD3:-1.26199896667;NKX6-1,2:-1.26832035918;E2F1..5:-1.35427225387;FOXP1:-1.38230538682;GFI1:-1.40131119361;BPTF:-1.40829107954;MYB:-1.42091250473;TFDP1:-1.49703757357;IKZF2:-1.6469125867;BREu{core}:-1.67236620297;FOXL1:-1.78287961537 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12156-128G5;search_select_hide=table117:FF:12156-128G5 | |||
}} | }} |
Latest revision as of 18:32, 4 June 2020
Name: | Mesothelial Cells, donor2 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs12197 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12197
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12197
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.69 |
10 | 10 | 0.00895 |
100 | 100 | 0.371 |
101 | 101 | 0.493 |
102 | 102 | 0.794 |
103 | 103 | 0.407 |
104 | 104 | 0.577 |
105 | 105 | 0.259 |
106 | 106 | 0.0332 |
107 | 107 | 0.0378 |
108 | 108 | 0.749 |
109 | 109 | 0.615 |
11 | 11 | 0.272 |
110 | 110 | 0.656 |
111 | 111 | 0.0218 |
112 | 112 | 0.414 |
113 | 113 | 0.302 |
114 | 114 | 0.422 |
115 | 115 | 0.313 |
116 | 116 | 0.897 |
117 | 117 | 0.136 |
118 | 118 | 0.854 |
119 | 119 | 0.379 |
12 | 12 | 0.995 |
120 | 120 | 0.568 |
121 | 121 | 0.568 |
122 | 122 | 0.37 |
123 | 123 | 1.62797e-5 |
124 | 124 | 0.741 |
125 | 125 | 0.0387 |
126 | 126 | 0.941 |
127 | 127 | 0.514 |
128 | 128 | 0.0925 |
129 | 129 | 0.0945 |
13 | 13 | 0.928 |
130 | 130 | 0.511 |
131 | 131 | 0.166 |
132 | 132 | 0.664 |
133 | 133 | 0.059 |
134 | 134 | 0.254 |
135 | 135 | 0.686 |
136 | 136 | 0.339 |
137 | 137 | 0.592 |
138 | 138 | 0.791 |
139 | 139 | 0.269 |
14 | 14 | 0.707 |
140 | 140 | 0.86 |
141 | 141 | 0.0915 |
142 | 142 | 0.814 |
143 | 143 | 0.3 |
144 | 144 | 0.922 |
145 | 145 | 0.402 |
146 | 146 | 0.295 |
147 | 147 | 0.869 |
148 | 148 | 0.661 |
149 | 149 | 0.0537 |
15 | 15 | 0.149 |
150 | 150 | 0.329 |
151 | 151 | 0.401 |
152 | 152 | 0.0101 |
153 | 153 | 0.929 |
154 | 154 | 0.34 |
155 | 155 | 0.0437 |
156 | 156 | 0.504 |
157 | 157 | 0.353 |
158 | 158 | 0.381 |
159 | 159 | 0.488 |
16 | 16 | 0.288 |
160 | 160 | 0.865 |
161 | 161 | 0.807 |
162 | 162 | 0.85 |
163 | 163 | 0.0262 |
164 | 164 | 0.925 |
165 | 165 | 0.269 |
166 | 166 | 0.611 |
167 | 167 | 0.442 |
168 | 168 | 0.582 |
169 | 169 | 0.0804 |
17 | 17 | 0.335 |
18 | 18 | 0.23 |
19 | 19 | 0.496 |
2 | 2 | 0.205 |
20 | 20 | 0.132 |
21 | 21 | 0.11 |
22 | 22 | 0.137 |
23 | 23 | 0.0383 |
24 | 24 | 0.359 |
25 | 25 | 0.316 |
26 | 26 | 0.354 |
27 | 27 | 0.116 |
28 | 28 | 0.5 |
29 | 29 | 0.911 |
3 | 3 | 0.969 |
30 | 30 | 0.135 |
31 | 31 | 0.26 |
32 | 32 | 0.348 |
33 | 33 | 0.984 |
34 | 34 | 0.388 |
35 | 35 | 0.787 |
36 | 36 | 0.463 |
37 | 37 | 0.162 |
38 | 38 | 0.762 |
39 | 39 | 0.463 |
4 | 4 | 0.649 |
40 | 40 | 0.944 |
41 | 41 | 0.441 |
42 | 42 | 0.825 |
43 | 43 | 0.242 |
44 | 44 | 0.792 |
45 | 45 | 0.028 |
46 | 46 | 0.625 |
47 | 47 | 0.838 |
48 | 48 | 0.654 |
49 | 49 | 0.356 |
5 | 5 | 0.66 |
50 | 50 | 0.995 |
51 | 51 | 0.637 |
52 | 52 | 0.144 |
53 | 53 | 0.632 |
54 | 54 | 0.315 |
55 | 55 | 0.0472 |
56 | 56 | 0.536 |
57 | 57 | 0.69 |
58 | 58 | 0.431 |
59 | 59 | 0.287 |
6 | 6 | 0.212 |
60 | 60 | 0.359 |
61 | 61 | 0.282 |
62 | 62 | 0.613 |
63 | 63 | 0.555 |
64 | 64 | 0.928 |
65 | 65 | 0.312 |
66 | 66 | 0.69 |
67 | 67 | 0.669 |
68 | 68 | 0.8 |
69 | 69 | 0.0941 |
7 | 7 | 0.784 |
70 | 70 | 0.074 |
71 | 71 | 0.513 |
72 | 72 | 0.405 |
73 | 73 | 0.0301 |
74 | 74 | 0.472 |
75 | 75 | 0.444 |
76 | 76 | 0.503 |
77 | 77 | 0.00753 |
78 | 78 | 0.894 |
79 | 79 | 0.458 |
8 | 8 | 0.441 |
80 | 80 | 0.204 |
81 | 81 | 0.63 |
82 | 82 | 0.261 |
83 | 83 | 0.235 |
84 | 84 | 0.991 |
85 | 85 | 0.215 |
86 | 86 | 0.937 |
87 | 87 | 0.119 |
88 | 88 | 0.788 |
89 | 89 | 0.0311 |
9 | 9 | 0.603 |
90 | 90 | 0.928 |
91 | 91 | 0.992 |
92 | 92 | 0.437 |
93 | 93 | 0.399 |
94 | 94 | 0.818 |
95 | 95 | 0.154 |
96 | 96 | 0.555 |
97 | 97 | 0.034 |
98 | 98 | 0.331 |
99 | 99 | 0.258 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12197
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000099 human mesothelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000099 (human mesothelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)