FF:11798-124C7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004816 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008063;DRR008935;DRZ000360;DRZ001745;DRZ011710;DRZ013095 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001 | |||
|comment=Changed from previous label. TODO: full classification | |comment=Changed from previous label. TODO: full classification | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000409,FF:0011121,FF:11798-124C7 | |fonse_treatment_closure=EFO:0000369,FF:0000409,FF:0011121,FF:11798-124C7 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD4%252bCD25-CD45RA-%2520memory%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13237.11798-124C7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11798-124C7 | |id=FF:11798-124C7 | ||
|is_a=EFO:0002091;;FF:0000002;;FF:0000210 | |is_a=EFO:0002091;;FF:0000002;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs13237 | |||
|library_id_phase_based=2:CNhs13237 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11798 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11798 | |||
|name=CD4+CD25-CD45RA- memory conventional T cells, donor2 | |name=CD4+CD25-CD45RA- memory conventional T cells, donor2 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13237,LSID1006,release012,COMPLETED | |profile_hcage=CNhs13237,LSID1006,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=0.787 | |rna_weight_ug=0.787 | ||
|sample_age=23 | |sample_age=23 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.59598695911865e-226!GO:0043227;membrane-bound organelle;2.49730775742486e-200!GO:0043231;intracellular membrane-bound organelle;5.63889854470375e-200!GO:0043226;organelle;9.13095531114402e-186!GO:0043229;intracellular organelle;4.67899182008359e-185!GO:0005737;cytoplasm;1.5186029870745e-133!GO:0044422;organelle part;2.24639392416858e-114!GO:0044446;intracellular organelle part;1.1029335887778e-112!GO:0005634;nucleus;1.01186850458862e-105!GO:0043170;macromolecule metabolic process;7.8672178332493e-99!GO:0044237;cellular metabolic process;1.20705934964437e-98!GO:0044238;primary metabolic process;2.54790431100138e-93!GO:0032991;macromolecular complex;6.14638144923715e-93!GO:0044444;cytoplasmic part;1.44689126488033e-91!GO:0030529;ribonucleoprotein complex;1.15685668268676e-86!GO:0003723;RNA binding;1.96767772393092e-79!GO:0044428;nuclear part;2.53342894831522e-75!GO:0043283;biopolymer metabolic process;3.02605051345562e-69!GO:0043233;organelle lumen;6.61488425830434e-65!GO:0031974;membrane-enclosed lumen;6.61488425830434e-65!GO:0010467;gene expression;6.69038820053001e-62!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.78435326423064e-57!GO:0005739;mitochondrion;1.19027535210416e-55!GO:0006396;RNA processing;3.53094852464621e-54!GO:0006412;translation;4.82514525669343e-52!GO:0005515;protein binding;3.39044949484727e-49!GO:0005840;ribosome;4.57519274903907e-49!GO:0019538;protein metabolic process;6.47759952871446e-48!GO:0044267;cellular protein metabolic process;7.70519020587198e-47!GO:0031981;nuclear lumen;1.90019596077242e-46!GO:0044260;cellular macromolecule metabolic process;4.60819704045098e-46!GO:0033036;macromolecule localization;7.07675641599556e-46!GO:0016071;mRNA metabolic process;2.08270164490442e-45!GO:0043234;protein complex;5.06439573416769e-45!GO:0015031;protein transport;1.44016418174796e-43!GO:0003735;structural constituent of ribosome;2.96155406095081e-43!GO:0003676;nucleic acid binding;3.29716735438514e-43!GO:0045184;establishment of protein localization;2.11461744505032e-42!GO:0008104;protein localization;2.96799069220058e-42!GO:0044429;mitochondrial part;6.65142751455097e-40!GO:0009059;macromolecule biosynthetic process;1.18411443278639e-39!GO:0008380;RNA splicing;3.69208686898572e-39!GO:0006397;mRNA processing;4.51206167324851e-39!GO:0033279;ribosomal subunit;7.056200161042e-39!GO:0031090;organelle membrane;1.24183860750287e-38!GO:0031967;organelle envelope;4.9417169639175e-38!GO:0031975;envelope;1.08152548659422e-37!GO:0005829;cytosol;1.21499873472006e-33!GO:0016070;RNA metabolic process;1.59558661462129e-33!GO:0046907;intracellular transport;8.78674568390282e-32!GO:0006259;DNA metabolic process;7.7261173325674e-31!GO:0006886;intracellular protein transport;1.14197194920658e-30!GO:0044249;cellular biosynthetic process;1.14197194920658e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.32820128925258e-30!GO:0009058;biosynthetic process;3.3724347367321e-30!GO:0005681;spliceosome;1.97170867779049e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.72855796982065e-29!GO:0005654;nucleoplasm;5.79480651670382e-29!GO:0065003;macromolecular complex assembly;2.58338374208135e-28!GO:0044445;cytosolic part;6.1334065904753e-27!GO:0016043;cellular component organization and biogenesis;9.43290821381146e-27!GO:0005740;mitochondrial envelope;4.96109959909437e-26!GO:0006512;ubiquitin cycle;1.23383856251639e-25!GO:0031966;mitochondrial membrane;1.38115482082669e-25!GO:0000166;nucleotide binding;5.80098613390977e-25!GO:0022607;cellular component assembly;1.06951996338979e-24!GO:0019866;organelle inner membrane;1.49107244626116e-24!GO:0044451;nucleoplasm part;5.36987198266378e-23!GO:0005743;mitochondrial inner membrane;1.29592297269821e-22!GO:0051641;cellular localization;3.03234763505803e-22!GO:0051649;establishment of cellular localization;5.72254136084489e-22!GO:0006996;organelle organization and biogenesis;5.85081841034872e-22!GO:0006119;oxidative phosphorylation;8.81175755592477e-21!GO:0015935;small ribosomal subunit;1.69757785912525e-20!GO:0012501;programmed cell death;1.0415664451515e-19!GO:0006915;apoptosis;1.32054163549901e-19!GO:0044455;mitochondrial membrane part;1.83054409888818e-19!GO:0015934;large ribosomal subunit;1.99623441335031e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.51365273886544e-19!GO:0022618;protein-RNA complex assembly;2.56371489616346e-19!GO:0043412;biopolymer modification;2.59159646756436e-19!GO:0017111;nucleoside-triphosphatase activity;3.21362607215413e-19!GO:0016462;pyrophosphatase activity;3.2158964202789e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;3.24156486645804e-19!GO:0044265;cellular macromolecule catabolic process;3.57949193433044e-19!GO:0008219;cell death;4.00528763292666e-19!GO:0016265;death;4.00528763292666e-19!GO:0016874;ligase activity;7.08033494681608e-19!GO:0019941;modification-dependent protein catabolic process;1.13718324425877e-18!GO:0043632;modification-dependent macromolecule catabolic process;1.13718324425877e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;1.19882781043834e-18!GO:0005730;nucleolus;1.58298554819052e-18!GO:0006511;ubiquitin-dependent protein catabolic process;2.11584954255296e-18!GO:0044257;cellular protein catabolic process;3.31131050041024e-18!GO:0043228;non-membrane-bound organelle;3.31335146153778e-18!GO:0043232;intracellular non-membrane-bound organelle;3.31335146153778e-18!GO:0006605;protein targeting;5.41314061059997e-18!GO:0032553;ribonucleotide binding;1.78890300826891e-17!GO:0032555;purine ribonucleotide binding;1.78890300826891e-17!GO:0006464;protein modification process;5.45575693904566e-17!GO:0043285;biopolymer catabolic process;6.14497348618519e-17!GO:0017076;purine nucleotide binding;6.69277382781164e-17!GO:0031980;mitochondrial lumen;1.07083457300574e-16!GO:0005759;mitochondrial matrix;1.07083457300574e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.54826566472009e-16!GO:0008135;translation factor activity, nucleic acid binding;1.70305621750697e-16!GO:0006974;response to DNA damage stimulus;2.50806471493197e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;3.85606891089563e-16!GO:0016604;nuclear body;5.56468504254246e-16!GO:0005746;mitochondrial respiratory chain;8.5862844143672e-16!GO:0008134;transcription factor binding;1.07405579865216e-15!GO:0006913;nucleocytoplasmic transport;1.23211331647654e-15!GO:0043687;post-translational protein modification;1.471756839989e-15!GO:0006323;DNA packaging;1.6748527180967e-15!GO:0051276;chromosome organization and biogenesis;1.995765641144e-15!GO:0051169;nuclear transport;2.16470747323516e-15!GO:0000502;proteasome complex (sensu Eukaryota);3.83513344459548e-15!GO:0006457;protein folding;3.89554481724653e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.51180000177207e-15!GO:0009057;macromolecule catabolic process;5.28440769464169e-15!GO:0050136;NADH dehydrogenase (quinone) activity;2.95920464918047e-14!GO:0003954;NADH dehydrogenase activity;2.95920464918047e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.95920464918047e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.40754580232291e-14!GO:0005524;ATP binding;4.86844258340446e-14!GO:0042623;ATPase activity, coupled;6.69667077067468e-14!GO:0016887;ATPase activity;6.69667077067468e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;6.75384753001367e-14!GO:0000375;RNA splicing, via transesterification reactions;6.75384753001367e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.75384753001367e-14!GO:0012505;endomembrane system;6.85426995209704e-14!GO:0006281;DNA repair;8.47974776660643e-14!GO:0042981;regulation of apoptosis;1.01888512540408e-13!GO:0032559;adenyl ribonucleotide binding;1.35470034676975e-13!GO:0043067;regulation of programmed cell death;1.60938117065931e-13!GO:0016607;nuclear speck;1.7877462384552e-13!GO:0030163;protein catabolic process;2.30404880651201e-13!GO:0007049;cell cycle;2.38001009685494e-13!GO:0050794;regulation of cellular process;4.2339246042585e-13!GO:0030554;adenyl nucleotide binding;6.02187617828898e-13!GO:0003743;translation initiation factor activity;1.06490160533324e-12!GO:0005635;nuclear envelope;1.06852883472408e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.34901351660691e-12!GO:0042773;ATP synthesis coupled electron transport;1.34901351660691e-12!GO:0005694;chromosome;2.16461820062189e-12!GO:0030964;NADH dehydrogenase complex (quinone);2.72208200258566e-12!GO:0045271;respiratory chain complex I;2.72208200258566e-12!GO:0005747;mitochondrial respiratory chain complex I;2.72208200258566e-12!GO:0044248;cellular catabolic process;3.1189224481707e-12!GO:0006413;translational initiation;3.82836775324929e-12!GO:0005761;mitochondrial ribosome;4.60775599433166e-12!GO:0000313;organellar ribosome;4.60775599433166e-12!GO:0065004;protein-DNA complex assembly;5.53452235335687e-12!GO:0031965;nuclear membrane;7.37720984054442e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.56819634910649e-12!GO:0017038;protein import;9.42832797101095e-12!GO:0006333;chromatin assembly or disassembly;9.52227395393713e-12!GO:0019222;regulation of metabolic process;1.21150556499746e-11!GO:0004386;helicase activity;2.64213278743674e-11!GO:0042254;ribosome biogenesis and assembly;3.16552704624131e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.0489513955759e-11!GO:0048770;pigment granule;4.11489359324623e-11!GO:0042470;melanosome;4.11489359324623e-11!GO:0008639;small protein conjugating enzyme activity;6.98674880510198e-11!GO:0044453;nuclear membrane part;9.97409014994248e-11!GO:0044427;chromosomal part;1.11038234219954e-10!GO:0051186;cofactor metabolic process;1.12794667869526e-10!GO:0004842;ubiquitin-protein ligase activity;1.25083431127661e-10!GO:0016568;chromatin modification;1.47656665409937e-10!GO:0051082;unfolded protein binding;1.54228715965056e-10!GO:0006446;regulation of translational initiation;1.77130774681233e-10!GO:0022402;cell cycle process;2.3854787624528e-10!GO:0048193;Golgi vesicle transport;2.963059308147e-10!GO:0008026;ATP-dependent helicase activity;3.73874184452241e-10!GO:0019787;small conjugating protein ligase activity;4.01856683832374e-10!GO:0000785;chromatin;7.40750414846995e-10!GO:0009719;response to endogenous stimulus;8.17723945850677e-10!GO:0031323;regulation of cellular metabolic process;8.67205005569474e-10!GO:0051726;regulation of cell cycle;9.22675165836944e-10!GO:0019829;cation-transporting ATPase activity;1.05076144521736e-09!GO:0050657;nucleic acid transport;1.23356886165491e-09!GO:0051236;establishment of RNA localization;1.23356886165491e-09!GO:0050658;RNA transport;1.23356886165491e-09!GO:0006403;RNA localization;1.24858719318907e-09!GO:0000074;regulation of progression through cell cycle;1.40277045259079e-09!GO:0003712;transcription cofactor activity;1.55854334089962e-09!GO:0005643;nuclear pore;1.68436595815553e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.8870322974732e-09!GO:0006350;transcription;3.14223918601903e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.62409010314988e-09!GO:0043566;structure-specific DNA binding;3.6596660974624e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.72732689027984e-09!GO:0006793;phosphorus metabolic process;7.02185211425423e-09!GO:0006796;phosphate metabolic process;7.02185211425423e-09!GO:0006334;nucleosome assembly;8.13368312983894e-09!GO:0006399;tRNA metabolic process;9.25745287001657e-09!GO:0006732;coenzyme metabolic process;1.08889564177129e-08!GO:0065002;intracellular protein transport across a membrane;1.20419745082466e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.28661164580768e-08!GO:0005794;Golgi apparatus;1.30839979415178e-08!GO:0031497;chromatin assembly;1.41492563404727e-08!GO:0009259;ribonucleotide metabolic process;1.63220273757594e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.86185045431331e-08!GO:0050789;regulation of biological process;2.32361040322414e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.3237418043248e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.4016646566296e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.44596927495346e-08!GO:0051170;nuclear import;2.44596927495346e-08!GO:0009260;ribonucleotide biosynthetic process;2.71813465977309e-08!GO:0006164;purine nucleotide biosynthetic process;2.74542465947837e-08!GO:0005768;endosome;3.5462933482172e-08!GO:0007243;protein kinase cascade;3.82042778957008e-08!GO:0010468;regulation of gene expression;4.06707245653458e-08!GO:0016787;hydrolase activity;4.06707245653458e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.10014238261859e-08!GO:0003697;single-stranded DNA binding;4.17168367479965e-08!GO:0006606;protein import into nucleus;4.21015865444225e-08!GO:0051028;mRNA transport;4.89795291048678e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.99725655116736e-08!GO:0016072;rRNA metabolic process;5.31912710738638e-08!GO:0006163;purine nucleotide metabolic process;5.92877604318206e-08!GO:0016881;acid-amino acid ligase activity;6.16293386953512e-08!GO:0008270;zinc ion binding;6.27742317291106e-08!GO:0006364;rRNA processing;7.66529232697872e-08!GO:0046930;pore complex;8.2360243650508e-08!GO:0044432;endoplasmic reticulum part;8.81491739712567e-08!GO:0008565;protein transporter activity;9.28026664960635e-08!GO:0015986;ATP synthesis coupled proton transport;1.01102607583252e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.01102607583252e-07!GO:0009150;purine ribonucleotide metabolic process;1.1707006376563e-07!GO:0004298;threonine endopeptidase activity;1.1707006376563e-07!GO:0016310;phosphorylation;1.30613366956044e-07!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.37892361950271e-07!GO:0009055;electron carrier activity;1.64337983914272e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.27002791640829e-07!GO:0009060;aerobic respiration;2.78508811504507e-07!GO:0006366;transcription from RNA polymerase II promoter;3.19873248452476e-07!GO:0005783;endoplasmic reticulum;3.20268715110966e-07!GO:0045786;negative regulation of progression through cell cycle;4.16568313483606e-07!GO:0003713;transcription coactivator activity;4.76232294074543e-07!GO:0032446;protein modification by small protein conjugation;5.08838716551391e-07!GO:0006916;anti-apoptosis;5.71315405504322e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.85063203903889e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;7.87725966567335e-07!GO:0032774;RNA biosynthetic process;7.91931915060336e-07!GO:0006754;ATP biosynthetic process;7.91931915060336e-07!GO:0006753;nucleoside phosphate metabolic process;7.91931915060336e-07!GO:0006917;induction of apoptosis;7.94922779615269e-07!GO:0005789;endoplasmic reticulum membrane;8.38584601223406e-07!GO:0048523;negative regulation of cellular process;8.66044171832844e-07!GO:0006351;transcription, DNA-dependent;9.59699008545785e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.0010862925822e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.0010862925822e-06!GO:0000151;ubiquitin ligase complex;1.02857747071717e-06!GO:0043065;positive regulation of apoptosis;1.06970197134726e-06!GO:0016567;protein ubiquitination;1.0903749435645e-06!GO:0051188;cofactor biosynthetic process;1.23229794339449e-06!GO:0012502;induction of programmed cell death;1.23801387979988e-06!GO:0051246;regulation of protein metabolic process;1.31608421547349e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.36296354275877e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.36296354275877e-06!GO:0000245;spliceosome assembly;1.42764104346304e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.47778522974979e-06!GO:0016192;vesicle-mediated transport;1.54101341253631e-06!GO:0043068;positive regulation of programmed cell death;1.62761349342086e-06!GO:0045333;cellular respiration;1.82117700887328e-06!GO:0043069;negative regulation of programmed cell death;1.99328304826976e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.05657176167081e-06!GO:0015399;primary active transmembrane transporter activity;2.05657176167081e-06!GO:0045449;regulation of transcription;2.08951311677793e-06!GO:0051168;nuclear export;2.2739813255329e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.75477746567658e-06!GO:0043066;negative regulation of apoptosis;2.84827793474618e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.96690280146252e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.96690280146252e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.96690280146252e-06!GO:0009141;nucleoside triphosphate metabolic process;3.08580489795795e-06!GO:0016563;transcription activator activity;3.08587216299141e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.18719590836858e-06!GO:0016779;nucleotidyltransferase activity;3.31475110839459e-06!GO:0009056;catabolic process;3.50344884596317e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.54368369983501e-06!GO:0016740;transferase activity;3.67804899771618e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.74209658416948e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.74209658416948e-06!GO:0046034;ATP metabolic process;3.76371534184849e-06!GO:0065009;regulation of a molecular function;3.76371534184849e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.76628535477513e-06!GO:0006260;DNA replication;4.47619298588609e-06!GO:0045259;proton-transporting ATP synthase complex;5.26563097966335e-06!GO:0031324;negative regulation of cellular metabolic process;5.90368277382979e-06!GO:0043038;amino acid activation;5.9693147308312e-06!GO:0006418;tRNA aminoacylation for protein translation;5.9693147308312e-06!GO:0043039;tRNA aminoacylation;5.9693147308312e-06!GO:0016564;transcription repressor activity;6.17903641150442e-06!GO:0007005;mitochondrion organization and biogenesis;6.31377223360102e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.36796682479906e-06!GO:0046914;transition metal ion binding;8.16988826956475e-06!GO:0019899;enzyme binding;8.28861496986386e-06!GO:0003724;RNA helicase activity;8.87109300536141e-06!GO:0009108;coenzyme biosynthetic process;1.21736730748354e-05!GO:0005525;GTP binding;1.2948444250411e-05!GO:0048519;negative regulation of biological process;1.43983760876371e-05!GO:0005793;ER-Golgi intermediate compartment;1.44036153469926e-05!GO:0000278;mitotic cell cycle;1.46712602720024e-05!GO:0006613;cotranslational protein targeting to membrane;1.8294623042377e-05!GO:0006099;tricarboxylic acid cycle;1.90131410460278e-05!GO:0046356;acetyl-CoA catabolic process;1.90131410460278e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.91938815033679e-05!GO:0006401;RNA catabolic process;2.15185606771219e-05!GO:0006752;group transfer coenzyme metabolic process;2.26636110035368e-05!GO:0000786;nucleosome;2.33255519918112e-05!GO:0065007;biological regulation;2.7765407532547e-05!GO:0003924;GTPase activity;2.87648357695425e-05!GO:0009615;response to virus;3.0657680038078e-05!GO:0003677;DNA binding;3.07942696442607e-05!GO:0008632;apoptotic program;3.38318897368116e-05!GO:0006355;regulation of transcription, DNA-dependent;3.49577202397778e-05!GO:0030120;vesicle coat;3.69606758050519e-05!GO:0030662;coated vesicle membrane;3.69606758050519e-05!GO:0007242;intracellular signaling cascade;3.79009614905037e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;4.08928845841962e-05!GO:0043492;ATPase activity, coupled to movement of substances;4.09682601903989e-05!GO:0008234;cysteine-type peptidase activity;4.55082043545152e-05!GO:0006084;acetyl-CoA metabolic process;4.60233082733235e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.67598034956387e-05!GO:0048475;coated membrane;5.2427280977733e-05!GO:0030117;membrane coat;5.2427280977733e-05!GO:0009892;negative regulation of metabolic process;5.26293139778835e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;5.63860349795198e-05!GO:0006310;DNA recombination;7.51380294424404e-05!GO:0003690;double-stranded DNA binding;8.5149748506789e-05!GO:0005762;mitochondrial large ribosomal subunit;8.5658360966318e-05!GO:0000315;organellar large ribosomal subunit;8.5658360966318e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.60595963145073e-05!GO:0005813;centrosome;9.40549315811965e-05!GO:0043623;cellular protein complex assembly;0.000105928664655751!GO:0006461;protein complex assembly;0.000121687163861338!GO:0009109;coenzyme catabolic process;0.00012672765489698!GO:0051187;cofactor catabolic process;0.00012672765489698!GO:0008186;RNA-dependent ATPase activity;0.000128044946716701!GO:0006402;mRNA catabolic process;0.00012969501513483!GO:0004674;protein serine/threonine kinase activity;0.000130204265066292!GO:0016363;nuclear matrix;0.000138762906857653!GO:0005770;late endosome;0.000143505634869319!GO:0044440;endosomal part;0.000154414092857508!GO:0010008;endosome membrane;0.000154414092857508!GO:0005773;vacuole;0.000171631648413131!GO:0006417;regulation of translation;0.000181047011612944!GO:0032561;guanyl ribonucleotide binding;0.000193089899638593!GO:0019001;guanyl nucleotide binding;0.000193089899638593!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000208752607241697!GO:0009117;nucleotide metabolic process;0.000222134641040473!GO:0016481;negative regulation of transcription;0.000243305519388999!GO:0006612;protein targeting to membrane;0.000255504619887919!GO:0043021;ribonucleoprotein binding;0.000258448861931446!GO:0005885;Arp2/3 protein complex;0.000272826147129621!GO:0005815;microtubule organizing center;0.000275261011302581!GO:0060090;molecular adaptor activity;0.000290315771176355!GO:0016251;general RNA polymerase II transcription factor activity;0.000355488066251422!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000359250130671237!GO:0008654;phospholipid biosynthetic process;0.000360826834771907!GO:0004004;ATP-dependent RNA helicase activity;0.000386442347508823!GO:0044431;Golgi apparatus part;0.000392880474591627!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000414747133135881!GO:0030384;phosphoinositide metabolic process;0.000439997970841154!GO:0006352;transcription initiation;0.000442707147042182!GO:0005667;transcription factor complex;0.000456119258656145!GO:0006818;hydrogen transport;0.000486175672902389!GO:0031326;regulation of cellular biosynthetic process;0.000503229731124262!GO:0043681;protein import into mitochondrion;0.000503229731124262!GO:0015992;proton transport;0.000515440917747872!GO:0003729;mRNA binding;0.000537315564971587!GO:0051427;hormone receptor binding;0.000602911180913929!GO:0006891;intra-Golgi vesicle-mediated transport;0.000605472919503708!GO:0008168;methyltransferase activity;0.000613722021078989!GO:0003899;DNA-directed RNA polymerase activity;0.000619438996421783!GO:0046489;phosphoinositide biosynthetic process;0.000620470403390791!GO:0000314;organellar small ribosomal subunit;0.000628822896449234!GO:0005763;mitochondrial small ribosomal subunit;0.000628822896449234!GO:0000323;lytic vacuole;0.000647723428087298!GO:0005764;lysosome;0.000647723428087298!GO:0016741;transferase activity, transferring one-carbon groups;0.000647723428087298!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000663216432070462!GO:0008033;tRNA processing;0.0006758274407574!GO:0022403;cell cycle phase;0.00075387158542331!GO:0006611;protein export from nucleus;0.000764721408013815!GO:0006261;DNA-dependent DNA replication;0.000827172921529084!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0010629397389348!GO:0035257;nuclear hormone receptor binding;0.00113469810867351!GO:0005769;early endosome;0.00122404273195509!GO:0019843;rRNA binding;0.00128215775158898!GO:0031072;heat shock protein binding;0.001287844996989!GO:0051789;response to protein stimulus;0.00147206099564135!GO:0006986;response to unfolded protein;0.00147206099564135!GO:0006650;glycerophospholipid metabolic process;0.00149265213455379!GO:0003714;transcription corepressor activity;0.00151245138728108!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00165699177441677!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00165699177441677!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00165699177441677!GO:0048522;positive regulation of cellular process;0.00172265530067509!GO:0022890;inorganic cation transmembrane transporter activity;0.00178532557907208!GO:0050790;regulation of catalytic activity;0.00180005447949575!GO:0019867;outer membrane;0.00180621801358526!GO:0051252;regulation of RNA metabolic process;0.00182941863307716!GO:0006414;translational elongation;0.00185460949594325!GO:0000087;M phase of mitotic cell cycle;0.00189742418311189!GO:0019783;small conjugating protein-specific protease activity;0.00193447801369227!GO:0006383;transcription from RNA polymerase III promoter;0.00195070969471113!GO:0005741;mitochondrial outer membrane;0.0019787834688776!GO:0046822;regulation of nucleocytoplasmic transport;0.00224120645267646!GO:0051539;4 iron, 4 sulfur cluster binding;0.00229650956256468!GO:0042110;T cell activation;0.00231532224013059!GO:0031968;organelle outer membrane;0.00233820522234759!GO:0004518;nuclease activity;0.0023733375329658!GO:0009889;regulation of biosynthetic process;0.00237536844484689!GO:0046474;glycerophospholipid biosynthetic process;0.00262594566497965!GO:0004843;ubiquitin-specific protease activity;0.00268286565998639!GO:0007067;mitosis;0.00283175330524436!GO:0016197;endosome transport;0.00290250185631879!GO:0007006;mitochondrial membrane organization and biogenesis;0.00302890940622096!GO:0008022;protein C-terminus binding;0.00315029359810147!GO:0009967;positive regulation of signal transduction;0.00316400119789236!GO:0000139;Golgi membrane;0.00328255876090693!GO:0006607;NLS-bearing substrate import into nucleus;0.00328255876090693!GO:0005774;vacuolar membrane;0.00333162606158099!GO:0005684;U2-dependent spliceosome;0.00343411897432874!GO:0004527;exonuclease activity;0.00357016207653306!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00365333516270485!GO:0003746;translation elongation factor activity;0.0038027475132901!GO:0007050;cell cycle arrest;0.00385867421049185!GO:0032259;methylation;0.00387779352568259!GO:0042802;identical protein binding;0.00392681493645963!GO:0005798;Golgi-associated vesicle;0.00403060813946506!GO:0043488;regulation of mRNA stability;0.00403060813946506!GO:0043487;regulation of RNA stability;0.00403060813946506!GO:0051251;positive regulation of lymphocyte activation;0.00403060813946506!GO:0048500;signal recognition particle;0.00404578183177687!GO:0051087;chaperone binding;0.00404645818691963!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00414918143216364!GO:0015002;heme-copper terminal oxidase activity;0.00414918143216364!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00414918143216364!GO:0004129;cytochrome-c oxidase activity;0.00414918143216364!GO:0022415;viral reproductive process;0.00423905260299469!GO:0051301;cell division;0.00431217229308137!GO:0044452;nucleolar part;0.00431217229308137!GO:0004221;ubiquitin thiolesterase activity;0.00441215319242566!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00441355036303951!GO:0006626;protein targeting to mitochondrion;0.00449076410994867!GO:0006302;double-strand break repair;0.00465338430513591!GO:0006405;RNA export from nucleus;0.00467919546970288!GO:0043414;biopolymer methylation;0.00475829410649589!GO:0007264;small GTPase mediated signal transduction;0.00475829410649589!GO:0016584;nucleosome positioning;0.00501906118363767!GO:0015630;microtubule cytoskeleton;0.00532713470634501!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00542449073368761!GO:0016859;cis-trans isomerase activity;0.00572251541548223!GO:0005070;SH3/SH2 adaptor activity;0.0057278087005469!GO:0009165;nucleotide biosynthetic process;0.0057278087005469!GO:0046966;thyroid hormone receptor binding;0.00626207635397253!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00648449003159051!GO:0045047;protein targeting to ER;0.00648449003159051!GO:0005669;transcription factor TFIID complex;0.00648449003159051!GO:0051090;regulation of transcription factor activity;0.00648449003159051!GO:0031625;ubiquitin protein ligase binding;0.0064993487775303!GO:0006839;mitochondrial transport;0.00650923659078754!GO:0048471;perinuclear region of cytoplasm;0.00653010929549866!GO:0008312;7S RNA binding;0.0065937505224358!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0067087101518168!GO:0015631;tubulin binding;0.00683474571682272!GO:0016790;thiolester hydrolase activity;0.00684552433298512!GO:0044437;vacuolar part;0.00703395340952095!GO:0006506;GPI anchor biosynthetic process;0.00734608246534541!GO:0005765;lysosomal membrane;0.00762616268910475!GO:0005637;nuclear inner membrane;0.0076869025739792!GO:0016853;isomerase activity;0.0078143743791512!GO:0042101;T cell receptor complex;0.00783566826713456!GO:0003678;DNA helicase activity;0.00798168570504713!GO:0045454;cell redox homeostasis;0.008053618182355!GO:0051540;metal cluster binding;0.00814766685390626!GO:0051536;iron-sulfur cluster binding;0.00814766685390626!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00814766685390626!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00814766685390626!GO:0031902;late endosome membrane;0.00839425430796392!GO:0000049;tRNA binding;0.00839425430796392!GO:0006505;GPI anchor metabolic process;0.00844163862634317!GO:0001772;immunological synapse;0.00853814351170162!GO:0003684;damaged DNA binding;0.00869279026303865!GO:0051223;regulation of protein transport;0.00884957916573905!GO:0006338;chromatin remodeling;0.00905293210376679!GO:0019901;protein kinase binding;0.0092857302506443!GO:0006497;protein amino acid lipidation;0.00933700977731908!GO:0051092;activation of NF-kappaB transcription factor;0.00946545488348758!GO:0008624;induction of apoptosis by extracellular signals;0.0100810897080568!GO:0003711;transcription elongation regulator activity;0.0101115092152373!GO:0045892;negative regulation of transcription, DNA-dependent;0.0102855203653186!GO:0051098;regulation of binding;0.0104227602745989!GO:0043621;protein self-association;0.010628837404407!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0107240833667404!GO:0030518;steroid hormone receptor signaling pathway;0.0108283628570199!GO:0016788;hydrolase activity, acting on ester bonds;0.0110156907552709!GO:0006919;caspase activation;0.0113317962061705!GO:0048487;beta-tubulin binding;0.0114793881540809!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0115743508905049!GO:0015980;energy derivation by oxidation of organic compounds;0.0117768238490836!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0117768238490836!GO:0030658;transport vesicle membrane;0.0120893184935727!GO:0006376;mRNA splice site selection;0.0121272379091912!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0121272379091912!GO:0043281;regulation of caspase activity;0.0123851240865552!GO:0016272;prefoldin complex;0.0124089215396955!GO:0005869;dynactin complex;0.0126771565248416!GO:0043022;ribosome binding;0.0127953838357526!GO:0007265;Ras protein signal transduction;0.0128482720245993!GO:0006289;nucleotide-excision repair;0.0131042713618474!GO:0004532;exoribonuclease activity;0.0131139291355965!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0131139291355965!GO:0016791;phosphoric monoester hydrolase activity;0.01314167561823!GO:0051329;interphase of mitotic cell cycle;0.0134228699868408!GO:0051920;peroxiredoxin activity;0.0136999517563447!GO:0004197;cysteine-type endopeptidase activity;0.0137496509304834!GO:0050852;T cell receptor signaling pathway;0.0138462026671084!GO:0000209;protein polyubiquitination;0.0138665532582114!GO:0008408;3'-5' exonuclease activity;0.013931525418552!GO:0033116;ER-Golgi intermediate compartment membrane;0.014502874458528!GO:0046467;membrane lipid biosynthetic process;0.0146338646879742!GO:0050865;regulation of cell activation;0.014777529489512!GO:0030118;clathrin coat;0.0148642288762281!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0148878389315968!GO:0051249;regulation of lymphocyte activation;0.015054050421959!GO:0005048;signal sequence binding;0.0150743450874944!GO:0051059;NF-kappaB binding;0.0151327015783126!GO:0031252;leading edge;0.0152637504156571!GO:0051235;maintenance of localization;0.0154419352569346!GO:0050811;GABA receptor binding;0.015720140937775!GO:0005657;replication fork;0.0158775530444492!GO:0016311;dephosphorylation;0.016424212608146!GO:0004722;protein serine/threonine phosphatase activity;0.0165547045574829!GO:0046649;lymphocyte activation;0.0167282327417904!GO:0000279;M phase;0.0167947992699261!GO:0007034;vacuolar transport;0.0171087616532113!GO:0008017;microtubule binding;0.0171524670539367!GO:0051336;regulation of hydrolase activity;0.0177646851561588!GO:0003725;double-stranded RNA binding;0.0180301735877676!GO:0019900;kinase binding;0.0180334449301736!GO:0001667;ameboidal cell migration;0.0180844736907016!GO:0032027;myosin light chain binding;0.0180844736907016!GO:0051325;interphase;0.0183172590024326!GO:0000287;magnesium ion binding;0.0184225259467528!GO:0008047;enzyme activator activity;0.0186370810349045!GO:0044438;microbody part;0.0186370810349045!GO:0044439;peroxisomal part;0.0186370810349045!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.018648351802268!GO:0008139;nuclear localization sequence binding;0.0195864324253692!GO:0048518;positive regulation of biological process;0.0209234141062492!GO:0031124;mRNA 3'-end processing;0.0214420496932774!GO:0000738;DNA catabolic process, exonucleolytic;0.0216525122218583!GO:0051052;regulation of DNA metabolic process;0.0217818703357509!GO:0030833;regulation of actin filament polymerization;0.0221862904858125!GO:0047485;protein N-terminus binding;0.022291786000977!GO:0030137;COPI-coated vesicle;0.0225987552432701!GO:0006914;autophagy;0.0228420158747699!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0230609419474585!GO:0010257;NADH dehydrogenase complex assembly;0.0230609419474585!GO:0033108;mitochondrial respiratory chain complex assembly;0.0230609419474585!GO:0030663;COPI coated vesicle membrane;0.0233060196774326!GO:0030126;COPI vesicle coat;0.0233060196774326!GO:0008287;protein serine/threonine phosphatase complex;0.0233677974506694!GO:0050870;positive regulation of T cell activation;0.0235205297815971!GO:0009116;nucleoside metabolic process;0.0235268952097648!GO:0008097;5S rRNA binding;0.0241760858812538!GO:0030660;Golgi-associated vesicle membrane;0.0245928303209042!GO:0042158;lipoprotein biosynthetic process;0.024747377942437!GO:0000082;G1/S transition of mitotic cell cycle;0.0247697339620382!GO:0008180;signalosome;0.0250205770178756!GO:0050863;regulation of T cell activation;0.0254219083487489!GO:0008637;apoptotic mitochondrial changes;0.0258596327679271!GO:0008276;protein methyltransferase activity;0.0260830189404202!GO:0043280;positive regulation of caspase activity;0.0260939214723527!GO:0033157;regulation of intracellular protein transport;0.0262203700923374!GO:0042306;regulation of protein import into nucleus;0.0262203700923374!GO:0019904;protein domain specific binding;0.0265563037325922!GO:0040029;regulation of gene expression, epigenetic;0.026684970205667!GO:0045603;positive regulation of endothelial cell differentiation;0.0268861716493169!GO:0006595;polyamine metabolic process;0.0268861716493169!GO:0007004;telomere maintenance via telomerase;0.0270941676283475!GO:0000178;exosome (RNase complex);0.0280023240885233!GO:0005521;lamin binding;0.0283101054948242!GO:0030695;GTPase regulator activity;0.0288960807446764!GO:0032200;telomere organization and biogenesis;0.0291112191546935!GO:0000723;telomere maintenance;0.0291112191546935!GO:0031903;microbody membrane;0.0292852269700813!GO:0005778;peroxisomal membrane;0.0292852269700813!GO:0004721;phosphoprotein phosphatase activity;0.0292852269700813!GO:0030521;androgen receptor signaling pathway;0.0296817295752188!GO:0030522;intracellular receptor-mediated signaling pathway;0.0296935960662347!GO:0048468;cell development;0.0301318079725174!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.030504493292068!GO:0031982;vesicle;0.030504493292068!GO:0022411;cellular component disassembly;0.0309042647418201!GO:0000119;mediator complex;0.0315372042669551!GO:0046979;TAP2 binding;0.0319240369402234!GO:0046977;TAP binding;0.0319240369402234!GO:0046978;TAP1 binding;0.0319240369402234!GO:0031123;RNA 3'-end processing;0.0322148178757713!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0325248581001092!GO:0030041;actin filament polymerization;0.0327413696086773!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0336792901063!GO:0003682;chromatin binding;0.0339143973630376!GO:0032508;DNA duplex unwinding;0.0340072484881244!GO:0032392;DNA geometric change;0.0340072484881244!GO:0004576;oligosaccharyl transferase activity;0.0340192540177607!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0341876508226608!GO:0000303;response to superoxide;0.0350973059573637!GO:0051219;phosphoprotein binding;0.0354489912976445!GO:0001784;phosphotyrosine binding;0.0354691177190251!GO:0016605;PML body;0.0355884647403223!GO:0045309;protein phosphorylated amino acid binding;0.0357463371913892!GO:0007259;JAK-STAT cascade;0.0357463371913892!GO:0042608;T cell receptor binding;0.0359999051825497!GO:0005832;chaperonin-containing T-complex;0.0359999051825497!GO:0030258;lipid modification;0.0361556720363122!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0362092895343368!GO:0016763;transferase activity, transferring pentosyl groups;0.0371717439335589!GO:0008320;protein transmembrane transporter activity;0.0372891588264158!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0373470075484557!GO:0015923;mannosidase activity;0.0382628320501523!GO:0005777;peroxisome;0.0383258390857468!GO:0042579;microbody;0.0383258390857468!GO:0019210;kinase inhibitor activity;0.0385852136535323!GO:0030968;unfolded protein response;0.038591223389988!GO:0032940;secretion by cell;0.0390855128391091!GO:0000776;kinetochore;0.0391574315592034!GO:0005083;small GTPase regulator activity;0.0391574315592034!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0402147745199411!GO:0031647;regulation of protein stability;0.0402440352474444!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0402440352474444!GO:0008213;protein amino acid alkylation;0.0407658154321732!GO:0006479;protein amino acid methylation;0.0407658154321732!GO:0009112;nucleobase metabolic process;0.0410808858108717!GO:0006144;purine base metabolic process;0.0419714037944787!GO:0033549;MAP kinase phosphatase activity;0.0423478451981232!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0423478451981232!GO:0009966;regulation of signal transduction;0.0423863001184436!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0423863001184436!GO:0016569;covalent chromatin modification;0.042531584485739!GO:0000059;protein import into nucleus, docking;0.0426355052993359!GO:0000090;mitotic anaphase;0.0426954428568408!GO:0051322;anaphase;0.0426954428568408!GO:0005665;DNA-directed RNA polymerase II, core complex;0.043271061419418!GO:0048002;antigen processing and presentation of peptide antigen;0.0444729275405172!GO:0031988;membrane-bound vesicle;0.0447634469910845!GO:0016570;histone modification;0.0449884609371524!GO:0016585;chromatin remodeling complex;0.0452553897401412!GO:0006984;ER-nuclear signaling pathway;0.045442963665215!GO:0051287;NAD binding;0.045442963665215!GO:0042393;histone binding;0.0461811483223619!GO:0006013;mannose metabolic process;0.0471578528243479!GO:0005784;translocon complex;0.0473835546866383!GO:0022406;membrane docking;0.0474739639602393!GO:0048278;vesicle docking;0.0474739639602393!GO:0043284;biopolymer biosynthetic process;0.0480345603706186!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0481947846130086!GO:0019058;viral infectious cycle;0.0483736166701357!GO:0006672;ceramide metabolic process;0.0484724219107178!GO:0045947;negative regulation of translational initiation;0.0485894608663045!GO:0030880;RNA polymerase complex;0.048645283875742!GO:0030867;rough endoplasmic reticulum membrane;0.04895074173534!GO:0006284;base-excision repair;0.0492869253702917!GO:0000118;histone deacetylase complex;0.0493883001873265!GO:0005092;GDP-dissociation inhibitor activity;0.0495537187901526 | |||
|sample_id=11798 | |sample_id=11798 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=PAX3,7:3.43646403234;CREB1:3.32319686439;RUNX1..3:3.16826767223;FOX{D1,D2}:3.14110359386;FOX{F1,F2,J1}:3.02565303924;ELF1,2,4:2.82985874546;RFX2..5_RFXANK_RFXAP:2.80130852863;BPTF:2.67758779671;ATF5_CREB3:2.6463737606;RORA:2.63388669165;FOXO1,3,4:2.61538900582;FOX{I1,J2}:2.527770664;T:2.46007338018;PDX1:2.45509725982;RFX1:2.38315866695;ATF4:2.37044378143;CDX1,2,4:2.10968215143;ETS1,2:2.04452079794;HMX1:2.03822856359;PBX1:1.9955501591;DMAP1_NCOR{1,2}_SMARC:1.98790891375;FOXN1:1.73542631063;TLX2:1.72457042486;LEF1_TCF7_TCF7L1,2:1.5793869432;ATF2:1.53941423817;SPI1:1.40805877266;IRF1,2:1.40375549166;GATA6:1.38630339268;PAX2:1.38162717139;JUN:1.37045148774;ELK1,4_GABP{A,B1}:1.34835197774;TGIF1:1.28310940652;ATF6:1.15538386565;SPIB:1.00161227386;NFIL3:0.986039899856;NFIX:0.9771640857;PAX6:0.947917251302;PAX4:0.939856802861;NFATC1..3:0.931901450588;NANOG{mouse}:0.88952980529;SOX2:0.818840564937;BREu{core}:0.762806703635;NFKB1_REL_RELA:0.730810488778;ZBTB16:0.704879763974;MAFB:0.596267554478;NKX2-1,4:0.51244279308;IRF7:0.50444966963;ZEB1:0.458902158108;STAT1,3:0.433368494807;TBX4,5:0.428892647367;HIF1A:0.401079212537;FOXQ1:0.398410422354;AHR_ARNT_ARNT2:0.356111006263;SNAI1..3:0.339105746931;SREBF1,2:0.329226501629;CRX:0.324355459717;HES1:0.286966941227;HOX{A6,A7,B6,B7}:0.281351280921;MYOD1:0.246480096578;FOXP1:0.241718840424;NFE2L1:0.236043909621;LMO2:0.235311470142;FOXA2:0.215062142898;NR5A1,2:0.213923255314;IKZF2:0.197996803965;YY1:0.189293283233;EP300:0.179321492524;POU2F1..3:0.15903017633;TAL1_TCF{3,4,12}:0.151082446164;NKX6-1,2:0.144926723267;POU1F1:0.0978752013162;SOX5:0.0914267814927;CUX2:0.0322537124233;STAT5{A,B}:-0.0244336338183;NKX2-2,8:-0.0375873882132;MYB:-0.04763610552;AR:-0.0632911951945;NFY{A,B,C}:-0.0678683504341;NANOG:-0.0717100001762;PITX1..3:-0.0960740017043;SPZ1:-0.0976885926818;FOSL2:-0.10435786936;OCT4_SOX2{dimer}:-0.142574208002;PAX5:-0.176854535284;NRF1:-0.180992244926;ZNF384:-0.186921681951;STAT2,4,6:-0.280490799338;EGR1..3:-0.295185326743;E2F1..5:-0.301288514554;NFE2L2:-0.342502249877;BACH2:-0.347955874358;RBPJ:-0.350415459757;HLF:-0.368822085862;FOS_FOS{B,L1}_JUN{B,D}:-0.380773407461;ALX1:-0.385215366666;CEBPA,B_DDIT3:-0.396480034125;ZNF143:-0.43547112643;HNF4A_NR2F1,2:-0.43816711346;NFE2:-0.43872344239;EVI1:-0.44861370594;ZNF148:-0.4537338142;HMGA1,2:-0.457829839172;HBP1_HMGB_SSRP1_UBTF:-0.465369832656;VSX1,2:-0.469422796534;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.472041666011;GFI1:-0.473420626082;DBP:-0.520005947728;HNF1A:-0.521547246747;NKX3-1:-0.525862104132;HAND1,2:-0.546377867351;GLI1..3:-0.569132199696;FOXD3:-0.569512547522;SOX{8,9,10}:-0.573395665957;PRRX1,2:-0.584008000704;NHLH1,2:-0.589846628864;PPARG:-0.616871459654;FOXP3:-0.646244769943;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.651547638785;FOXM1:-0.672403050381;SRF:-0.708331210097;MYFfamily:-0.710186721795;SMAD1..7,9:-0.72882784479;GCM1,2:-0.762432716522;ALX4:-0.792249546473;RXRA_VDR{dimer}:-0.837303444988;MEF2{A,B,C,D}:-0.852024752159;bHLH_family:-0.856381462885;RREB1:-0.857365044134;ESRRA:-0.891856582929;PAX8:-0.896682013602;MED-1{core}:-0.896985587783;ZFP161:-0.966391696124;XBP1:-0.969114090622;ZBTB6:-0.992894524748;HOX{A5,B5}:-1.00088280716;GFI1B:-1.01409649271;MZF1:-1.02587734818;AIRE:-1.05037047904;ADNP_IRX_SIX_ZHX:-1.05445040854;MTF1:-1.08397549683;SOX17:-1.10781518851;MYBL2:-1.11138734613;ZNF238:-1.11313176793;MAZ:-1.12503734383;POU5F1:-1.1284837882;TFAP4:-1.17999025753;TP53:-1.19074419478;TFDP1:-1.19881599937;ARID5B:-1.21611334128;PATZ1:-1.22220195378;HSF1,2:-1.22428173235;REST:-1.23366373359;TBP:-1.28121246381;MTE{core}:-1.28396833869;NR6A1:-1.31287656256;PRDM1:-1.32004619767;LHX3,4:-1.33044569932;GATA4:-1.36862951741;TOPORS:-1.40332123276;NR1H4:-1.41235995309;TFAP2B:-1.43601217776;TFCP2:-1.4548962279;HOXA9_MEIS1:-1.45599317374;HIC1:-1.45620991113;ZNF423:-1.45845433903;UFEwm:-1.47122490442;SP1:-1.50612863425;NKX2-3_NKX2-5:-1.51925843616;NR3C1:-1.58139896862;GTF2A1,2:-1.6254867612;GTF2I:-1.63606793303;POU3F1..4:-1.66613650233;CDC5L:-1.67927205083;XCPE1{core}:-1.68911975966;ONECUT1,2:-1.72140268104;TLX1..3_NFIC{dimer}:-1.72541766449;FOXL1:-1.74548545937;TEAD1:-1.74629351694;EN1,2:-1.82091793165;ZIC1..3:-1.86740326929;GZF1:-1.86926787413;HOX{A4,D4}:-1.87298027188;EBF1:-1.89515212703;ESR1:-1.89771799247;KLF4:-1.93344921373;RXR{A,B,G}:-1.94174841754;TFAP2{A,C}:-1.98697081226;POU6F1:-2.03937369179;PAX1,9:-2.10786788615;TEF:-2.39387833024;NKX3-2:-2.52156413546;IKZF1:-2.99418364174 | |top_motifs=PAX3,7:3.43646403234;CREB1:3.32319686439;RUNX1..3:3.16826767223;FOX{D1,D2}:3.14110359386;FOX{F1,F2,J1}:3.02565303924;ELF1,2,4:2.82985874546;RFX2..5_RFXANK_RFXAP:2.80130852863;BPTF:2.67758779671;ATF5_CREB3:2.6463737606;RORA:2.63388669165;FOXO1,3,4:2.61538900582;FOX{I1,J2}:2.527770664;T:2.46007338018;PDX1:2.45509725982;RFX1:2.38315866695;ATF4:2.37044378143;CDX1,2,4:2.10968215143;ETS1,2:2.04452079794;HMX1:2.03822856359;PBX1:1.9955501591;DMAP1_NCOR{1,2}_SMARC:1.98790891375;FOXN1:1.73542631063;TLX2:1.72457042486;LEF1_TCF7_TCF7L1,2:1.5793869432;ATF2:1.53941423817;SPI1:1.40805877266;IRF1,2:1.40375549166;GATA6:1.38630339268;PAX2:1.38162717139;JUN:1.37045148774;ELK1,4_GABP{A,B1}:1.34835197774;TGIF1:1.28310940652;ATF6:1.15538386565;SPIB:1.00161227386;NFIL3:0.986039899856;NFIX:0.9771640857;PAX6:0.947917251302;PAX4:0.939856802861;NFATC1..3:0.931901450588;NANOG{mouse}:0.88952980529;SOX2:0.818840564937;BREu{core}:0.762806703635;NFKB1_REL_RELA:0.730810488778;ZBTB16:0.704879763974;MAFB:0.596267554478;NKX2-1,4:0.51244279308;IRF7:0.50444966963;ZEB1:0.458902158108;STAT1,3:0.433368494807;TBX4,5:0.428892647367;HIF1A:0.401079212537;FOXQ1:0.398410422354;AHR_ARNT_ARNT2:0.356111006263;SNAI1..3:0.339105746931;SREBF1,2:0.329226501629;CRX:0.324355459717;HES1:0.286966941227;HOX{A6,A7,B6,B7}:0.281351280921;MYOD1:0.246480096578;FOXP1:0.241718840424;NFE2L1:0.236043909621;LMO2:0.235311470142;FOXA2:0.215062142898;NR5A1,2:0.213923255314;IKZF2:0.197996803965;YY1:0.189293283233;EP300:0.179321492524;POU2F1..3:0.15903017633;TAL1_TCF{3,4,12}:0.151082446164;NKX6-1,2:0.144926723267;POU1F1:0.0978752013162;SOX5:0.0914267814927;CUX2:0.0322537124233;STAT5{A,B}:-0.0244336338183;NKX2-2,8:-0.0375873882132;MYB:-0.04763610552;AR:-0.0632911951945;NFY{A,B,C}:-0.0678683504341;NANOG:-0.0717100001762;PITX1..3:-0.0960740017043;SPZ1:-0.0976885926818;FOSL2:-0.10435786936;OCT4_SOX2{dimer}:-0.142574208002;PAX5:-0.176854535284;NRF1:-0.180992244926;ZNF384:-0.186921681951;STAT2,4,6:-0.280490799338;EGR1..3:-0.295185326743;E2F1..5:-0.301288514554;NFE2L2:-0.342502249877;BACH2:-0.347955874358;RBPJ:-0.350415459757;HLF:-0.368822085862;FOS_FOS{B,L1}_JUN{B,D}:-0.380773407461;ALX1:-0.385215366666;CEBPA,B_DDIT3:-0.396480034125;ZNF143:-0.43547112643;HNF4A_NR2F1,2:-0.43816711346;NFE2:-0.43872344239;EVI1:-0.44861370594;ZNF148:-0.4537338142;HMGA1,2:-0.457829839172;HBP1_HMGB_SSRP1_UBTF:-0.465369832656;VSX1,2:-0.469422796534;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.472041666011;GFI1:-0.473420626082;DBP:-0.520005947728;HNF1A:-0.521547246747;NKX3-1:-0.525862104132;HAND1,2:-0.546377867351;GLI1..3:-0.569132199696;FOXD3:-0.569512547522;SOX{8,9,10}:-0.573395665957;PRRX1,2:-0.584008000704;NHLH1,2:-0.589846628864;PPARG:-0.616871459654;FOXP3:-0.646244769943;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.651547638785;FOXM1:-0.672403050381;SRF:-0.708331210097;MYFfamily:-0.710186721795;SMAD1..7,9:-0.72882784479;GCM1,2:-0.762432716522;ALX4:-0.792249546473;RXRA_VDR{dimer}:-0.837303444988;MEF2{A,B,C,D}:-0.852024752159;bHLH_family:-0.856381462885;RREB1:-0.857365044134;ESRRA:-0.891856582929;PAX8:-0.896682013602;MED-1{core}:-0.896985587783;ZFP161:-0.966391696124;XBP1:-0.969114090622;ZBTB6:-0.992894524748;HOX{A5,B5}:-1.00088280716;GFI1B:-1.01409649271;MZF1:-1.02587734818;AIRE:-1.05037047904;ADNP_IRX_SIX_ZHX:-1.05445040854;MTF1:-1.08397549683;SOX17:-1.10781518851;MYBL2:-1.11138734613;ZNF238:-1.11313176793;MAZ:-1.12503734383;POU5F1:-1.1284837882;TFAP4:-1.17999025753;TP53:-1.19074419478;TFDP1:-1.19881599937;ARID5B:-1.21611334128;PATZ1:-1.22220195378;HSF1,2:-1.22428173235;REST:-1.23366373359;TBP:-1.28121246381;MTE{core}:-1.28396833869;NR6A1:-1.31287656256;PRDM1:-1.32004619767;LHX3,4:-1.33044569932;GATA4:-1.36862951741;TOPORS:-1.40332123276;NR1H4:-1.41235995309;TFAP2B:-1.43601217776;TFCP2:-1.4548962279;HOXA9_MEIS1:-1.45599317374;HIC1:-1.45620991113;ZNF423:-1.45845433903;UFEwm:-1.47122490442;SP1:-1.50612863425;NKX2-3_NKX2-5:-1.51925843616;NR3C1:-1.58139896862;GTF2A1,2:-1.6254867612;GTF2I:-1.63606793303;POU3F1..4:-1.66613650233;CDC5L:-1.67927205083;XCPE1{core}:-1.68911975966;ONECUT1,2:-1.72140268104;TLX1..3_NFIC{dimer}:-1.72541766449;FOXL1:-1.74548545937;TEAD1:-1.74629351694;EN1,2:-1.82091793165;ZIC1..3:-1.86740326929;GZF1:-1.86926787413;HOX{A4,D4}:-1.87298027188;EBF1:-1.89515212703;ESR1:-1.89771799247;KLF4:-1.93344921373;RXR{A,B,G}:-1.94174841754;TFAP2{A,C}:-1.98697081226;POU6F1:-2.03937369179;PAX1,9:-2.10786788615;TEF:-2.39387833024;NKX3-2:-2.52156413546;IKZF1:-2.99418364174 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11798-124C7;search_select_hide=table117:FF:11798-124C7 | |||
}} | }} | ||
Latest revision as of 18:21, 4 June 2020
| Name: | CD4+CD25-CD45RA- memory conventional T cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13237 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13237
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13237
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.553 |
| 10 | 10 | 0.0187 |
| 100 | 100 | 0.9 |
| 101 | 101 | 0.344 |
| 102 | 102 | 0.988 |
| 103 | 103 | 0.535 |
| 104 | 104 | 0.63 |
| 105 | 105 | 0.241 |
| 106 | 106 | 0.505 |
| 107 | 107 | 0.0101 |
| 108 | 108 | 0.516 |
| 109 | 109 | 0.157 |
| 11 | 11 | 0.292 |
| 110 | 110 | 0.922 |
| 111 | 111 | 0.937 |
| 112 | 112 | 0.882 |
| 113 | 113 | 0.28 |
| 114 | 114 | 0.637 |
| 115 | 115 | 0.234 |
| 116 | 116 | 0.131 |
| 117 | 117 | 0.00243 |
| 118 | 118 | 0.396 |
| 119 | 119 | 0.378 |
| 12 | 12 | 0.6 |
| 120 | 120 | 1 |
| 121 | 121 | 0.962 |
| 122 | 122 | 0.774 |
| 123 | 123 | 0.0566 |
| 124 | 124 | 0.633 |
| 125 | 125 | 0.669 |
| 126 | 126 | 0.408 |
| 127 | 127 | 0.945 |
| 128 | 128 | 0.662 |
| 129 | 129 | 0.902 |
| 13 | 13 | 0.545 |
| 130 | 130 | 0.37 |
| 131 | 131 | 0.765 |
| 132 | 132 | 0.274 |
| 133 | 133 | 0.655 |
| 134 | 134 | 0.91 |
| 135 | 135 | 0.995 |
| 136 | 136 | 0.856 |
| 137 | 137 | 0.0186 |
| 138 | 138 | 0.459 |
| 139 | 139 | 0.0549 |
| 14 | 14 | 0.61 |
| 140 | 140 | 0.196 |
| 141 | 141 | 0.853 |
| 142 | 142 | 0.622 |
| 143 | 143 | 0.00161 |
| 144 | 144 | 0.944 |
| 145 | 145 | 0.968 |
| 146 | 146 | 0.462 |
| 147 | 147 | 0.0151 |
| 148 | 148 | 0.255 |
| 149 | 149 | 0.528 |
| 15 | 15 | 0.175 |
| 150 | 150 | 0.727 |
| 151 | 151 | 0.674 |
| 152 | 152 | 0.511 |
| 153 | 153 | 0.877 |
| 154 | 154 | 0.459 |
| 155 | 155 | 0.0403 |
| 156 | 156 | 0.321 |
| 157 | 157 | 0.332 |
| 158 | 158 | 0.0163 |
| 159 | 159 | 0.303 |
| 16 | 16 | 0.533 |
| 160 | 160 | 0.185 |
| 161 | 161 | 0.913 |
| 162 | 162 | 0.0438 |
| 163 | 163 | 0.388 |
| 164 | 164 | 0.143 |
| 165 | 165 | 0.517 |
| 166 | 166 | 0.501 |
| 167 | 167 | 0.287 |
| 168 | 168 | 0.531 |
| 169 | 169 | 0.22 |
| 17 | 17 | 0.728 |
| 18 | 18 | 0.863 |
| 19 | 19 | 0.0447 |
| 2 | 2 | 0.425 |
| 20 | 20 | 0.332 |
| 21 | 21 | 0.826 |
| 22 | 22 | 0.402 |
| 23 | 23 | 0.529 |
| 24 | 24 | 0.783 |
| 25 | 25 | 0.0806 |
| 26 | 26 | 0.687 |
| 27 | 27 | 0.627 |
| 28 | 28 | 0.453 |
| 29 | 29 | 0.027 |
| 3 | 3 | 0.303 |
| 30 | 30 | 0.128 |
| 31 | 31 | 0.714 |
| 32 | 32 | 0.033 |
| 33 | 33 | 0.16 |
| 34 | 34 | 0.376 |
| 35 | 35 | 0.235 |
| 36 | 36 | 0.0301 |
| 37 | 37 | 0.193 |
| 38 | 38 | 0.728 |
| 39 | 39 | 0.258 |
| 4 | 4 | 0.706 |
| 40 | 40 | 0.638 |
| 41 | 41 | 0.0926 |
| 42 | 42 | 0.183 |
| 43 | 43 | 0.556 |
| 44 | 44 | 0.771 |
| 45 | 45 | 0.24 |
| 46 | 46 | 0.63 |
| 47 | 47 | 0.305 |
| 48 | 48 | 0.534 |
| 49 | 49 | 0.231 |
| 5 | 5 | 0.343 |
| 50 | 50 | 0.492 |
| 51 | 51 | 0.87 |
| 52 | 52 | 0.399 |
| 53 | 53 | 0.613 |
| 54 | 54 | 0.995 |
| 55 | 55 | 0.725 |
| 56 | 56 | 0.922 |
| 57 | 57 | 0.964 |
| 58 | 58 | 0.151 |
| 59 | 59 | 0.562 |
| 6 | 6 | 0.761 |
| 60 | 60 | 0.551 |
| 61 | 61 | 0.0765 |
| 62 | 62 | 0.182 |
| 63 | 63 | 0.823 |
| 64 | 64 | 0.715 |
| 65 | 65 | 0.701 |
| 66 | 66 | 0.781 |
| 67 | 67 | 0.526 |
| 68 | 68 | 0.823 |
| 69 | 69 | 0.697 |
| 7 | 7 | 0.346 |
| 70 | 70 | 0.0975 |
| 71 | 71 | 0.0904 |
| 72 | 72 | 0.133 |
| 73 | 73 | 0.567 |
| 74 | 74 | 0.682 |
| 75 | 75 | 0.0198 |
| 76 | 76 | 0.156 |
| 77 | 77 | 0.0169 |
| 78 | 78 | 0.823 |
| 79 | 79 | 0.793 |
| 8 | 8 | 0.589 |
| 80 | 80 | 0.0021 |
| 81 | 81 | 0.56 |
| 82 | 82 | 0.313 |
| 83 | 83 | 0.457 |
| 84 | 84 | 0.651 |
| 85 | 85 | 0.699 |
| 86 | 86 | 0.0998 |
| 87 | 87 | 0.866 |
| 88 | 88 | 0.837 |
| 89 | 89 | 0.0542 |
| 9 | 9 | 0.924 |
| 90 | 90 | 0.142 |
| 91 | 91 | 0.844 |
| 92 | 92 | 0.857 |
| 93 | 93 | 0.516 |
| 94 | 94 | 0.19 |
| 95 | 95 | 0.00552 |
| 96 | 96 | 0.35 |
| 97 | 97 | 0.424 |
| 98 | 98 | 0.233 |
| 99 | 99 | 1.44131e-5 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13237
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
