FF:11795-124C4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005585 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |accession_numbers=CAGE;DRX008191;DRR009063;DRZ000488;DRZ001873;DRZ011838;DRZ013223 | ||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001 | |||
|comment=Changed from previous label. TODO: full classification | |comment=Changed from previous label. TODO: full classification | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD4%252bCD25-CD45RA%252b%2520naive%2520conventional%2520T%2520cells%252c%2520donor2.CNhs13205.11795-124C4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11795-124C4 | |id=FF:11795-124C4 | ||
|is_a=EFO:0002091;;FF:0000002;;FF:0000210 | |is_a=EFO:0002091;;FF:0000002;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs13205 | |||
|library_id_phase_based=2:CNhs13205 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11795 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11795 | |||
|name=CD4+CD25-CD45RA+ naive conventional T cells, donor2 | |name=CD4+CD25-CD45RA+ naive conventional T cells, donor2 | ||
|namespace= | |namespace= | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13205,LSID1004,release012,COMPLETED | |profile_hcage=CNhs13205,LSID1004,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.0573560730249988,0.415848565824586,0.141015267618496,0.272806271758583,0,0,0,0,0,0,0,0,0,0,0.102961957061387,0,0,0.0328084716699422,0,0,0,0,0,0.157946887489539,0,0,0.183048017928581,0,0,0,0,0,0,0,0,0,0,0,0,0.15247472009271,0.138494371357451,0,0,0,0,0,0,0,0.160179751910617,0,0,0,0,0,-0.0839305477320758,0,-0.0969923612426051,0,0,0.00561832984829033,0,0,0,0,0,0,0,0,0.18613148201837,0,1.28914991353992,0,0,0.255904783757597,0,0,0,0,0.0514809785306935,0,0,0,0,-0.0531710420276173,-0.0873006291884384,0,0,0,-0.0752437400617192,0.154729184070146,0,0,0,0,0.0880961307806634,0.173689116070487,0,0,0,0,0,0,0,0,0,0,0,0.0289891188018387,0,0,0,0,0,-0.0448926153917674,0.102961957061387,0,0,0.124823715444844,0.249729730887399,0,0,0,0,0,0 | |||
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| |||
|rna_box=124 | |rna_box=124 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=1.2848 | |rna_weight_ug=1.2848 | ||
|sample_age=23 | |sample_age=23 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.2867485183338e-229!GO:0043227;membrane-bound organelle;9.20405209342131e-209!GO:0043231;intracellular membrane-bound organelle;2.02587044818302e-208!GO:0043226;organelle;9.00651438666447e-192!GO:0043229;intracellular organelle;2.49534416919298e-191!GO:0005634;nucleus;4.48081783724752e-121!GO:0005737;cytoplasm;2.06121059469533e-119!GO:0044422;organelle part;3.64726357644459e-109!GO:0043170;macromolecule metabolic process;1.61566428103924e-108!GO:0044446;intracellular organelle part;1.1884879700895e-107!GO:0044237;cellular metabolic process;8.55377373602931e-107!GO:0044238;primary metabolic process;3.1284246196012e-102!GO:0032991;macromolecular complex;2.58542669930966e-88!GO:0003723;RNA binding;2.84734364602808e-88!GO:0030529;ribonucleoprotein complex;1.97822831334703e-87!GO:0044428;nuclear part;1.91996769503982e-84!GO:0043283;biopolymer metabolic process;4.38779437121551e-81!GO:0044444;cytoplasmic part;2.13821403392538e-80!GO:0010467;gene expression;5.16024132258394e-76!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.2738955453418e-70!GO:0043233;organelle lumen;9.28079264580199e-69!GO:0031974;membrane-enclosed lumen;9.28079264580199e-69!GO:0006396;RNA processing;3.73361183558313e-60!GO:0003676;nucleic acid binding;1.9888808814519e-58!GO:0031981;nuclear lumen;9.53587023282199e-52!GO:0005739;mitochondrion;1.20048790519301e-51!GO:0006412;translation;1.78042357825315e-48!GO:0016071;mRNA metabolic process;3.60277616655865e-48!GO:0005840;ribosome;1.13124061902841e-46!GO:0016070;RNA metabolic process;2.77522444098116e-46!GO:0033036;macromolecule localization;1.82394422687385e-45!GO:0019538;protein metabolic process;5.31416866000735e-44!GO:0044267;cellular protein metabolic process;4.36669552226371e-43!GO:0015031;protein transport;4.84853810575347e-43!GO:0008380;RNA splicing;1.89470294355316e-42!GO:0044260;cellular macromolecule metabolic process;1.95782547089431e-42!GO:0005515;protein binding;1.99337073982295e-41!GO:0043234;protein complex;2.28843837778237e-41!GO:0008104;protein localization;3.64956358158258e-41!GO:0045184;establishment of protein localization;8.66335330614969e-41!GO:0006397;mRNA processing;9.94454706150853e-41!GO:0003735;structural constituent of ribosome;1.98830237685647e-40!GO:0009059;macromolecule biosynthetic process;2.12532254347348e-36!GO:0033279;ribosomal subunit;6.29109106084527e-36!GO:0044429;mitochondrial part;6.94127139532752e-36!GO:0031967;organelle envelope;1.5916936578341e-35!GO:0031090;organelle membrane;2.04325372703142e-35!GO:0031975;envelope;3.3457873819104e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.41752607327699e-33!GO:0005654;nucleoplasm;7.62961574037996e-33!GO:0006259;DNA metabolic process;6.3823181813436e-32!GO:0005681;spliceosome;2.40720573292358e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.35512413580036e-30!GO:0006886;intracellular protein transport;6.4417042328826e-30!GO:0005829;cytosol;3.55738327555362e-29!GO:0046907;intracellular transport;3.77257860546839e-29!GO:0044249;cellular biosynthetic process;1.29003841336122e-27!GO:0006512;ubiquitin cycle;2.97834411424738e-27!GO:0065003;macromolecular complex assembly;2.97834411424738e-27!GO:0016043;cellular component organization and biogenesis;6.06103221109835e-27!GO:0009058;biosynthetic process;7.19888784118439e-27!GO:0044451;nucleoplasm part;2.16907501124872e-26!GO:0044445;cytosolic part;1.21165809086431e-25!GO:0000166;nucleotide binding;3.37502913467852e-25!GO:0022607;cellular component assembly;3.74720569536331e-24!GO:0005740;mitochondrial envelope;2.20312661897522e-22!GO:0016874;ligase activity;6.0468127120801e-22!GO:0031966;mitochondrial membrane;9.97236169853993e-22!GO:0006996;organelle organization and biogenesis;1.14053840361237e-21!GO:0019866;organelle inner membrane;4.74890376054259e-21!GO:0022618;protein-RNA complex assembly;6.70964062030486e-21!GO:0005730;nucleolus;2.47289018827172e-20!GO:0015935;small ribosomal subunit;8.4097939090539e-20!GO:0051641;cellular localization;1.88319363029517e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.3492106049602e-19!GO:0016462;pyrophosphatase activity;2.67982746893996e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;2.87167085932322e-19!GO:0043412;biopolymer modification;3.03353364476911e-19!GO:0044265;cellular macromolecule catabolic process;4.43884422015683e-19!GO:0017111;nucleoside-triphosphatase activity;5.36564056778883e-19!GO:0051649;establishment of cellular localization;6.07564803816876e-19!GO:0005743;mitochondrial inner membrane;7.36004494085365e-19!GO:0016604;nuclear body;1.46154855297962e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;3.44890677731494e-18!GO:0019941;modification-dependent protein catabolic process;4.47094731816996e-18!GO:0043632;modification-dependent macromolecule catabolic process;4.47094731816996e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.50329604438573e-18!GO:0008135;translation factor activity, nucleic acid binding;5.05341475214794e-18!GO:0044257;cellular protein catabolic process;7.42915613105497e-18!GO:0006119;oxidative phosphorylation;3.31953763450156e-17!GO:0015934;large ribosomal subunit;3.64000035705959e-17!GO:0006605;protein targeting;4.87930957545806e-17!GO:0043285;biopolymer catabolic process;5.65768878306214e-17!GO:0044455;mitochondrial membrane part;1.28148843469905e-16!GO:0032553;ribonucleotide binding;1.48309015739686e-16!GO:0032555;purine ribonucleotide binding;1.48309015739686e-16!GO:0019222;regulation of metabolic process;1.51652952864208e-16!GO:0006325;establishment and/or maintenance of chromatin architecture;1.7923982399441e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.89319596362273e-16!GO:0051276;chromosome organization and biogenesis;2.08748774142865e-16!GO:0006464;protein modification process;2.36162083280793e-16!GO:0050794;regulation of cellular process;3.34477640256332e-16!GO:0017076;purine nucleotide binding;3.50680736927279e-16!GO:0043687;post-translational protein modification;7.443416732218e-16!GO:0006323;DNA packaging;8.03812230766247e-16!GO:0016607;nuclear speck;8.66507797410006e-16!GO:0031980;mitochondrial lumen;1.26186109962455e-15!GO:0005759;mitochondrial matrix;1.26186109962455e-15!GO:0006974;response to DNA damage stimulus;1.50623123812403e-15!GO:0016887;ATPase activity;2.58398361338604e-15!GO:0043228;non-membrane-bound organelle;4.05896649499886e-15!GO:0043232;intracellular non-membrane-bound organelle;4.05896649499886e-15!GO:0008270;zinc ion binding;5.09971362570288e-15!GO:0006913;nucleocytoplasmic transport;5.60124138074838e-15!GO:0004386;helicase activity;5.66776604675838e-15!GO:0009057;macromolecule catabolic process;6.70092352857387e-15!GO:0008134;transcription factor binding;6.948842430428e-15!GO:0042623;ATPase activity, coupled;7.83032914333331e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;8.0016825689002e-15!GO:0000375;RNA splicing, via transesterification reactions;8.0016825689002e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.0016825689002e-15!GO:0051169;nuclear transport;8.80508530528069e-15!GO:0031323;regulation of cellular metabolic process;1.07251483227728e-14!GO:0006350;transcription;1.34589774494054e-14!GO:0006457;protein folding;1.79629682783989e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.30331158603083e-14!GO:0005524;ATP binding;2.58521488482142e-14!GO:0006281;DNA repair;5.57482807739979e-14!GO:0032559;adenyl ribonucleotide binding;8.28742857074176e-14!GO:0005635;nuclear envelope;9.21879220811775e-14!GO:0003743;translation initiation factor activity;1.24582575414029e-13!GO:0031965;nuclear membrane;1.47005525798871e-13!GO:0006413;translational initiation;1.96140415805808e-13!GO:0030554;adenyl nucleotide binding;2.36440248164606e-13!GO:0012505;endomembrane system;3.36542894320492e-13!GO:0010468;regulation of gene expression;3.76193093495852e-13!GO:0030163;protein catabolic process;5.08485250362886e-13!GO:0008026;ATP-dependent helicase activity;5.58515367424683e-13!GO:0042254;ribosome biogenesis and assembly;8.5970923252685e-13!GO:0044453;nuclear membrane part;9.14778654994297e-13!GO:0012501;programmed cell death;9.38861832917604e-13!GO:0006915;apoptosis;1.01976056579095e-12!GO:0016568;chromatin modification;1.0899065637188e-12!GO:0005746;mitochondrial respiratory chain;1.46348948398553e-12!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.06456985179188e-12!GO:0008219;cell death;3.54174977844792e-12!GO:0016265;death;3.54174977844792e-12!GO:0032774;RNA biosynthetic process;3.56999231859535e-12!GO:0006403;RNA localization;4.11272764627189e-12!GO:0050657;nucleic acid transport;4.36797753770219e-12!GO:0051236;establishment of RNA localization;4.36797753770219e-12!GO:0050658;RNA transport;4.36797753770219e-12!GO:0008639;small protein conjugating enzyme activity;4.65403349633615e-12!GO:0044248;cellular catabolic process;4.80321969420243e-12!GO:0006351;transcription, DNA-dependent;4.84164299882097e-12!GO:0004842;ubiquitin-protein ligase activity;6.02977684823659e-12!GO:0019787;small conjugating protein ligase activity;6.50713250131005e-12!GO:0000502;proteasome complex (sensu Eukaryota);9.8199534489195e-12!GO:0005643;nuclear pore;1.77135791963941e-11!GO:0050136;NADH dehydrogenase (quinone) activity;2.33001985408655e-11!GO:0003954;NADH dehydrogenase activity;2.33001985408655e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.33001985408655e-11!GO:0005694;chromosome;2.88254151622269e-11!GO:0006446;regulation of translational initiation;3.29359254928254e-11!GO:0046914;transition metal ion binding;4.2934377407095e-11!GO:0045449;regulation of transcription;5.2362888196316e-11!GO:0051082;unfolded protein binding;5.2362888196316e-11!GO:0007049;cell cycle;5.37282330073747e-11!GO:0017038;protein import;6.28831371163458e-11!GO:0050789;regulation of biological process;7.85550381519913e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;8.34403859417512e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.04839462803018e-10!GO:0048193;Golgi vesicle transport;2.06540851478793e-10!GO:0065004;protein-DNA complex assembly;2.09853479875821e-10!GO:0051028;mRNA transport;2.59485663791907e-10!GO:0006333;chromatin assembly or disassembly;2.89028357430452e-10!GO:0042775;organelle ATP synthesis coupled electron transport;3.25371684508862e-10!GO:0042773;ATP synthesis coupled electron transport;3.25371684508862e-10!GO:0006399;tRNA metabolic process;4.16996691622579e-10!GO:0006355;regulation of transcription, DNA-dependent;4.93449294637567e-10!GO:0005761;mitochondrial ribosome;5.37326332393038e-10!GO:0000313;organellar ribosome;5.37326332393038e-10!GO:0003677;DNA binding;8.37056675835486e-10!GO:0003712;transcription cofactor activity;9.74925950209896e-10!GO:0030964;NADH dehydrogenase complex (quinone);1.08571169977373e-09!GO:0045271;respiratory chain complex I;1.08571169977373e-09!GO:0005747;mitochondrial respiratory chain complex I;1.08571169977373e-09!GO:0065002;intracellular protein transport across a membrane;1.3288439624426e-09!GO:0016881;acid-amino acid ligase activity;1.36614337836241e-09!GO:0051186;cofactor metabolic process;1.43117896347986e-09!GO:0044427;chromosomal part;1.46633973738904e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.73066405654846e-09!GO:0043566;structure-specific DNA binding;2.00727073354737e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.51390583076359e-09!GO:0016072;rRNA metabolic process;3.46611254181583e-09!GO:0046930;pore complex;3.75022951791183e-09!GO:0006364;rRNA processing;3.95009237785518e-09!GO:0009719;response to endogenous stimulus;5.30499002542519e-09!GO:0048770;pigment granule;5.71429982967477e-09!GO:0042470;melanosome;5.71429982967477e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.97983812147553e-09!GO:0032446;protein modification by small protein conjugation;1.27762622980221e-08!GO:0009259;ribonucleotide metabolic process;1.3068569840079e-08!GO:0042981;regulation of apoptosis;1.3068569840079e-08!GO:0005794;Golgi apparatus;1.7929941302002e-08!GO:0043067;regulation of programmed cell death;1.7929941302002e-08!GO:0008565;protein transporter activity;2.32213378085333e-08!GO:0009260;ribonucleotide biosynthetic process;2.50984674876743e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.6089824931655e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.84381915178372e-08!GO:0016567;protein ubiquitination;3.26793214935152e-08!GO:0019829;cation-transporting ATPase activity;3.60614771731251e-08!GO:0000785;chromatin;3.92484971109066e-08!GO:0003713;transcription coactivator activity;4.23837911873476e-08!GO:0016787;hydrolase activity;5.06909589534039e-08!GO:0000151;ubiquitin ligase complex;5.0876279878406e-08!GO:0003697;single-stranded DNA binding;5.15246036612879e-08!GO:0006164;purine nucleotide biosynthetic process;5.19528568718261e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.97580235481033e-08!GO:0006163;purine nucleotide metabolic process;9.43149091478204e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.02677508858302e-07!GO:0006732;coenzyme metabolic process;1.02950614292084e-07!GO:0022402;cell cycle process;1.30820009477433e-07!GO:0016779;nucleotidyltransferase activity;1.73374472591474e-07!GO:0051726;regulation of cell cycle;1.90975509469977e-07!GO:0009150;purine ribonucleotide metabolic process;1.97526089295435e-07!GO:0051170;nuclear import;2.01982464505978e-07!GO:0009060;aerobic respiration;2.02364265591699e-07!GO:0006366;transcription from RNA polymerase II promoter;2.8002587272889e-07!GO:0000074;regulation of progression through cell cycle;2.92186945012663e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.95909770484485e-07!GO:0006793;phosphorus metabolic process;3.12481902841382e-07!GO:0006796;phosphate metabolic process;3.12481902841382e-07!GO:0006606;protein import into nucleus;3.17703617673253e-07!GO:0016563;transcription activator activity;3.65547748261405e-07!GO:0016740;transferase activity;4.36567500168373e-07!GO:0003724;RNA helicase activity;4.50155094903354e-07!GO:0051168;nuclear export;6.76199882994235e-07!GO:0006260;DNA replication;7.85357130117059e-07!GO:0000245;spliceosome assembly;7.85357130117059e-07!GO:0015078;hydrogen ion transmembrane transporter activity;9.54653272416263e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.03542738466708e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.03542738466708e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.03542738466708e-06!GO:0016192;vesicle-mediated transport;1.08588108495212e-06!GO:0005768;endosome;1.18757691526725e-06!GO:0015986;ATP synthesis coupled proton transport;1.23864240330699e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.23864240330699e-06!GO:0045333;cellular respiration;1.49131479295617e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.57007237942256e-06!GO:0006334;nucleosome assembly;1.72745674655568e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.84573607699151e-06!GO:0016310;phosphorylation;2.18160820455912e-06!GO:0043038;amino acid activation;2.21498302722104e-06!GO:0006418;tRNA aminoacylation for protein translation;2.21498302722104e-06!GO:0043039;tRNA aminoacylation;2.21498302722104e-06!GO:0031497;chromatin assembly;2.70154074698137e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.82129304873566e-06!GO:0065007;biological regulation;3.05060568087565e-06!GO:0044432;endoplasmic reticulum part;3.73654242664281e-06!GO:0004298;threonine endopeptidase activity;3.94670073357873e-06!GO:0051188;cofactor biosynthetic process;4.31987493511677e-06!GO:0045259;proton-transporting ATP synthase complex;4.80098770877935e-06!GO:0006888;ER to Golgi vesicle-mediated transport;5.96497823539331e-06!GO:0009056;catabolic process;6.11838379418645e-06!GO:0006754;ATP biosynthetic process;6.11838379418645e-06!GO:0006753;nucleoside phosphate metabolic process;6.11838379418645e-06!GO:0016469;proton-transporting two-sector ATPase complex;7.76908692569952e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.78389329199383e-06!GO:0015399;primary active transmembrane transporter activity;7.78389329199383e-06!GO:0046034;ATP metabolic process;8.34719131239451e-06!GO:0009199;ribonucleoside triphosphate metabolic process;8.67000422778213e-06!GO:0009142;nucleoside triphosphate biosynthetic process;9.29574806283057e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.29574806283057e-06!GO:0008186;RNA-dependent ATPase activity;1.1700334280114e-05!GO:0009141;nucleoside triphosphate metabolic process;1.19356917523143e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.22918411781548e-05!GO:0009144;purine nucleoside triphosphate metabolic process;1.22918411781548e-05!GO:0006099;tricarboxylic acid cycle;1.33332855162764e-05!GO:0046356;acetyl-CoA catabolic process;1.33332855162764e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.33332855162764e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.33332855162764e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.37186336234366e-05!GO:0006401;RNA catabolic process;1.50804564816579e-05!GO:0008234;cysteine-type peptidase activity;1.96303948090479e-05!GO:0051246;regulation of protein metabolic process;2.00538088615707e-05!GO:0003690;double-stranded DNA binding;2.12559070749697e-05!GO:0005789;endoplasmic reticulum membrane;2.28785282885742e-05!GO:0006084;acetyl-CoA metabolic process;2.33298723130118e-05!GO:0006613;cotranslational protein targeting to membrane;2.37284750638959e-05!GO:0007005;mitochondrion organization and biogenesis;2.45281419724064e-05!GO:0006402;mRNA catabolic process;3.24388245274964e-05!GO:0009108;coenzyme biosynthetic process;3.41967511960898e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.43511549117379e-05!GO:0006916;anti-apoptosis;3.46713482131899e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.56079770219189e-05!GO:0016363;nuclear matrix;3.75822510357237e-05!GO:0019899;enzyme binding;3.83846803187927e-05!GO:0004004;ATP-dependent RNA helicase activity;3.95983121605592e-05!GO:0007243;protein kinase cascade;3.96254013191319e-05!GO:0045786;negative regulation of progression through cell cycle;3.9778413655681e-05!GO:0005783;endoplasmic reticulum;4.02863681561555e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.41153328342034e-05!GO:0030120;vesicle coat;4.64342939322746e-05!GO:0030662;coated vesicle membrane;4.64342939322746e-05!GO:0031324;negative regulation of cellular metabolic process;5.56138894529185e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;5.9193663226894e-05!GO:0043623;cellular protein complex assembly;6.36394312287203e-05!GO:0008168;methyltransferase activity;7.66199128474303e-05!GO:0016741;transferase activity, transferring one-carbon groups;8.04123278699475e-05!GO:0009109;coenzyme catabolic process;9.58414277216517e-05!GO:0043069;negative regulation of programmed cell death;9.62069161542365e-05!GO:0044431;Golgi apparatus part;9.62522903966678e-05!GO:0016564;transcription repressor activity;9.75505743854875e-05!GO:0065009;regulation of a molecular function;9.77829188728589e-05!GO:0005667;transcription factor complex;9.97659109462401e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000101514623883425!GO:0048523;negative regulation of cellular process;0.000107312507465446!GO:0008033;tRNA processing;0.00010928794014272!GO:0003899;DNA-directed RNA polymerase activity;0.000118321615697943!GO:0016251;general RNA polymerase II transcription factor activity;0.000125115647366631!GO:0005813;centrosome;0.000130472426667253!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000132130548246346!GO:0048475;coated membrane;0.000132130548246346!GO:0030117;membrane coat;0.000132130548246346!GO:0009055;electron carrier activity;0.000136052666694948!GO:0043066;negative regulation of apoptosis;0.000136052666694948!GO:0043492;ATPase activity, coupled to movement of substances;0.000142742107502904!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000144959175015684!GO:0006612;protein targeting to membrane;0.000145455606132428!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000154255063852085!GO:0003729;mRNA binding;0.000165369014252045!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000180835806283456!GO:0006461;protein complex assembly;0.000197720756965572!GO:0006752;group transfer coenzyme metabolic process;0.000198877509762819!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000208161233728696!GO:0006310;DNA recombination;0.000213004706813957!GO:0005793;ER-Golgi intermediate compartment;0.000251957196323337!GO:0043021;ribonucleoprotein binding;0.000255340840697204!GO:0006352;transcription initiation;0.000259515784088042!GO:0051187;cofactor catabolic process;0.00026488331361225!GO:0008654;phospholipid biosynthetic process;0.000285198795234678!GO:0006383;transcription from RNA polymerase III promoter;0.000294578036170445!GO:0019783;small conjugating protein-specific protease activity;0.000329955103555313!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000348911064560085!GO:0005525;GTP binding;0.000351788721604012!GO:0016481;negative regulation of transcription;0.000352346691976543!GO:0004674;protein serine/threonine kinase activity;0.000353966014206713!GO:0030384;phosphoinositide metabolic process;0.00037276788503678!GO:0006261;DNA-dependent DNA replication;0.000383503294550864!GO:0006891;intra-Golgi vesicle-mediated transport;0.000383515460152216!GO:0009892;negative regulation of metabolic process;0.000444479580408271!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000453741984850577!GO:0005815;microtubule organizing center;0.000484173702341444!GO:0004843;ubiquitin-specific protease activity;0.000491264233971309!GO:0044440;endosomal part;0.000491323347868794!GO:0010008;endosome membrane;0.000491323347868794!GO:0005885;Arp2/3 protein complex;0.000495893807478532!GO:0060090;molecular adaptor activity;0.000631537488273408!GO:0004221;ubiquitin thiolesterase activity;0.000662208798652236!GO:0051427;hormone receptor binding;0.000685365872444354!GO:0044452;nucleolar part;0.000722144018427571!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000759582171209946!GO:0046489;phosphoinositide biosynthetic process;0.000784555841295655!GO:0032259;methylation;0.00081880150360803!GO:0006917;induction of apoptosis;0.00083247265669601!GO:0006611;protein export from nucleus;0.000863065863809233!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00087531755743623!GO:0019843;rRNA binding;0.000899404473943189!GO:0031072;heat shock protein binding;0.000943901407356674!GO:0006607;NLS-bearing substrate import into nucleus;0.000943901407356674!GO:0043681;protein import into mitochondrion;0.000972403664444025!GO:0006405;RNA export from nucleus;0.000980399093235079!GO:0003924;GTPase activity;0.000988904797842294!GO:0005769;early endosome;0.00104350580687347!GO:0048519;negative regulation of biological process;0.00109214395251945!GO:0051539;4 iron, 4 sulfur cluster binding;0.00109590751844449!GO:0012502;induction of programmed cell death;0.00113429530086332!GO:0035257;nuclear hormone receptor binding;0.00114253749667806!GO:0005762;mitochondrial large ribosomal subunit;0.00114388598514336!GO:0000315;organellar large ribosomal subunit;0.00114388598514336!GO:0006818;hydrogen transport;0.00115531338432471!GO:0000314;organellar small ribosomal subunit;0.00115993952500844!GO:0005763;mitochondrial small ribosomal subunit;0.00115993952500844!GO:0009117;nucleotide metabolic process;0.00126995950340751!GO:0006650;glycerophospholipid metabolic process;0.00132172186625332!GO:0000139;Golgi membrane;0.00134236547974502!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0013757611411843!GO:0004527;exonuclease activity;0.00141308599522955!GO:0015992;proton transport;0.00141509534907082!GO:0005770;late endosome;0.00164924685599049!GO:0004518;nuclease activity;0.00170745380240195!GO:0005773;vacuole;0.00183335080953082!GO:0000278;mitotic cell cycle;0.00191539876196096!GO:0043414;biopolymer methylation;0.00195904544655938!GO:0003746;translation elongation factor activity;0.00196140566081604!GO:0005798;Golgi-associated vesicle;0.00197205797536595!GO:0015631;tubulin binding;0.00204653652497968!GO:0006414;translational elongation;0.00207752017502031!GO:0031625;ubiquitin protein ligase binding;0.00218565147918407!GO:0019867;outer membrane;0.00219978942133746!GO:0000786;nucleosome;0.00223924582474168!GO:0016790;thiolester hydrolase activity;0.00225250000969055!GO:0046474;glycerophospholipid biosynthetic process;0.00234273172861697!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.002378358921914!GO:0006417;regulation of translation;0.00241256559901233!GO:0003678;DNA helicase activity;0.00258321585933902!GO:0005684;U2-dependent spliceosome;0.00261120599903332!GO:0043065;positive regulation of apoptosis;0.00266904656451112!GO:0048500;signal recognition particle;0.00276287183472837!GO:0051252;regulation of RNA metabolic process;0.00278430064942546!GO:0008632;apoptotic program;0.00292917071912249!GO:0051087;chaperone binding;0.00306812415347271!GO:0006289;nucleotide-excision repair;0.00307920070224502!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00308209898161541!GO:0031968;organelle outer membrane;0.00308247143921102!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00310229078828085!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00310229078828085!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00310229078828085!GO:0032561;guanyl ribonucleotide binding;0.00311476908676674!GO:0019001;guanyl nucleotide binding;0.00311476908676674!GO:0005741;mitochondrial outer membrane;0.00335654070743636!GO:0008312;7S RNA binding;0.00335654070743636!GO:0009615;response to virus;0.00337538194495305!GO:0006338;chromatin remodeling;0.00337867383917297!GO:0007242;intracellular signaling cascade;0.00347786935679758!GO:0043068;positive regulation of programmed cell death;0.00357710473116628!GO:0000323;lytic vacuole;0.00365523700309919!GO:0005764;lysosome;0.00365523700309919!GO:0003682;chromatin binding;0.00366897141968544!GO:0007006;mitochondrial membrane organization and biogenesis;0.00388179582347194!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00397916770031642!GO:0004532;exoribonuclease activity;0.0040128647492562!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0040128647492562!GO:0032200;telomere organization and biogenesis;0.0040128647492562!GO:0000723;telomere maintenance;0.0040128647492562!GO:0042101;T cell receptor complex;0.0042626423512567!GO:0007265;Ras protein signal transduction;0.00438121322839385!GO:0016197;endosome transport;0.00438799382316049!GO:0051540;metal cluster binding;0.00439562501313769!GO:0051536;iron-sulfur cluster binding;0.00439562501313769!GO:0031326;regulation of cellular biosynthetic process;0.00440248532878016!GO:0016584;nucleosome positioning;0.00448708436576298!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00464436426167639!GO:0045047;protein targeting to ER;0.00464436426167639!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00492748667497632!GO:0008017;microtubule binding;0.00496097768016309!GO:0008022;protein C-terminus binding;0.00498868662731577!GO:0005637;nuclear inner membrane;0.00514666049264521!GO:0030518;steroid hormone receptor signaling pathway;0.00514843499199254!GO:0005669;transcription factor TFIID complex;0.00518606117767196!GO:0000209;protein polyubiquitination;0.00579449595420716!GO:0043488;regulation of mRNA stability;0.00598111749875762!GO:0043487;regulation of RNA stability;0.00598111749875762!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00598519660526168!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00656857242920447!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00656857242920447!GO:0048471;perinuclear region of cytoplasm;0.00658144874634397!GO:0005083;small GTPase regulator activity;0.00666552354755226!GO:0008408;3'-5' exonuclease activity;0.00679661627392483!GO:0030695;GTPase regulator activity;0.00685199730078447!GO:0006497;protein amino acid lipidation;0.00719073992470534!GO:0022890;inorganic cation transmembrane transporter activity;0.00752885946962875!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00848442485627667!GO:0006626;protein targeting to mitochondrion;0.00867025862973351!GO:0007264;small GTPase mediated signal transduction;0.00871546032939782!GO:0006839;mitochondrial transport;0.00874583295753843!GO:0006302;double-strand break repair;0.00897810892021287!GO:0003711;transcription elongation regulator activity;0.00919939730654697!GO:0030258;lipid modification;0.00938433453548059!GO:0050790;regulation of catalytic activity;0.00966490737876536!GO:0005070;SH3/SH2 adaptor activity;0.00984557007987936!GO:0008276;protein methyltransferase activity;0.0100341827146934!GO:0040029;regulation of gene expression, epigenetic;0.0100341827146934!GO:0030521;androgen receptor signaling pathway;0.0100341827146934!GO:0047485;protein N-terminus binding;0.0100341827146934!GO:0046966;thyroid hormone receptor binding;0.010111727915641!GO:0046467;membrane lipid biosynthetic process;0.010658239859461!GO:0000049;tRNA binding;0.0108293995358138!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0108911377820308!GO:0003725;double-stranded RNA binding;0.0110028370909517!GO:0044438;microbody part;0.0110028370909517!GO:0044439;peroxisomal part;0.0110028370909517!GO:0009165;nucleotide biosynthetic process;0.0110267609818187!GO:0016788;hydrolase activity, acting on ester bonds;0.0111028522192716!GO:0006506;GPI anchor biosynthetic process;0.011698339540518!GO:0031461;cullin-RING ubiquitin ligase complex;0.0118524922290185!GO:0005774;vacuolar membrane;0.0119003326515479!GO:0003684;damaged DNA binding;0.0119839556335262!GO:0008047;enzyme activator activity;0.0120283560541043!GO:0003714;transcription corepressor activity;0.0120884163871704!GO:0000781;chromosome, telomeric region;0.0122661679392225!GO:0030522;intracellular receptor-mediated signaling pathway;0.0126959564106572!GO:0016859;cis-trans isomerase activity;0.0127036717885639!GO:0006376;mRNA splice site selection;0.0127036717885639!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0127036717885639!GO:0008097;5S rRNA binding;0.0130672877119987!GO:0030880;RNA polymerase complex;0.0133903533025243!GO:0030658;transport vesicle membrane;0.0134905962550476!GO:0000059;protein import into nucleus, docking;0.0134905962550476!GO:0048487;beta-tubulin binding;0.0135689244317835!GO:0051789;response to protein stimulus;0.0136888167599274!GO:0006986;response to unfolded protein;0.0136888167599274!GO:0007004;telomere maintenance via telomerase;0.0137393867367393!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0137523166421706!GO:0015980;energy derivation by oxidation of organic compounds;0.0149115370604783!GO:0050852;T cell receptor signaling pathway;0.0151614085920415!GO:0016853;isomerase activity;0.0152932849014522!GO:0051301;cell division;0.0154778514768289!GO:0006505;GPI anchor metabolic process;0.0155120820193149!GO:0045892;negative regulation of transcription, DNA-dependent;0.0157653414738234!GO:0005048;signal sequence binding;0.0161484327047625!GO:0043087;regulation of GTPase activity;0.0162673452149323!GO:0042110;T cell activation;0.0166320047962625!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0166320047962625!GO:0015002;heme-copper terminal oxidase activity;0.0166320047962625!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0166320047962625!GO:0004129;cytochrome-c oxidase activity;0.0166320047962625!GO:0016272;prefoldin complex;0.01665495916234!GO:0000178;exosome (RNase complex);0.0176556302732169!GO:0001772;immunological synapse;0.0176556302732169!GO:0000119;mediator complex;0.0189002694408137!GO:0009161;ribonucleoside monophosphate metabolic process;0.0190499248807511!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0190499248807511!GO:0009889;regulation of biosynthetic process;0.0190913626776746!GO:0009116;nucleoside metabolic process;0.0193724423102991!GO:0031903;microbody membrane;0.0193773336770597!GO:0005778;peroxisomal membrane;0.0193773336770597!GO:0008287;protein serine/threonine phosphatase complex;0.0194520566577748!GO:0009112;nucleobase metabolic process;0.0197832738753976!GO:0008624;induction of apoptosis by extracellular signals;0.0197832738753976!GO:0022406;membrane docking;0.0197832738753976!GO:0048278;vesicle docking;0.0197832738753976!GO:0005765;lysosomal membrane;0.0198972279344576!GO:0008139;nuclear localization sequence binding;0.0203423320251033!GO:0042158;lipoprotein biosynthetic process;0.0204225588034876!GO:0004722;protein serine/threonine phosphatase activity;0.0204463268153835!GO:0045603;positive regulation of endothelial cell differentiation;0.0204755837158832!GO:0000738;DNA catabolic process, exonucleolytic;0.0207159013269599!GO:0005521;lamin binding;0.0208797865581174!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0208797865581174!GO:0000428;DNA-directed RNA polymerase complex;0.0208797865581174!GO:0022415;viral reproductive process;0.0217498547532384!GO:0016585;chromatin remodeling complex;0.0223701863523696!GO:0051052;regulation of DNA metabolic process;0.0225130022362491!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0225735139498542!GO:0044437;vacuolar part;0.0226257473527704!GO:0050811;GABA receptor binding;0.0227313249379109!GO:0006904;vesicle docking during exocytosis;0.0229913949859414!GO:0001667;ameboidal cell migration;0.0234659326561339!GO:0032027;myosin light chain binding;0.0234659326561339!GO:0007050;cell cycle arrest;0.0238491330403894!GO:0004197;cysteine-type endopeptidase activity;0.0241908318917828!GO:0033116;ER-Golgi intermediate compartment membrane;0.0241908318917828!GO:0030118;clathrin coat;0.0245546085528714!GO:0043022;ribosome binding;0.0246868924803703!GO:0042393;histone binding;0.0256521126898289!GO:0030137;COPI-coated vesicle;0.0260043729379321!GO:0006278;RNA-dependent DNA replication;0.0260382213168503!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0260382213168503!GO:0000175;3'-5'-exoribonuclease activity;0.0263218952313168!GO:0003702;RNA polymerase II transcription factor activity;0.0263690018532989!GO:0043621;protein self-association;0.0263690018532989!GO:0016301;kinase activity;0.0264867490851342!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0264867490851342!GO:0010257;NADH dehydrogenase complex assembly;0.0264867490851342!GO:0033108;mitochondrial respiratory chain complex assembly;0.0264867490851342!GO:0016569;covalent chromatin modification;0.0264867490851342!GO:0006013;mannose metabolic process;0.0265570225587362!GO:0030660;Golgi-associated vesicle membrane;0.0273266663717198!GO:0032508;DNA duplex unwinding;0.0273277767881434!GO:0032392;DNA geometric change;0.0273277767881434!GO:0016570;histone modification;0.0279806599060752!GO:0006406;mRNA export from nucleus;0.0281731754007674!GO:0005869;dynactin complex;0.0283914276359406!GO:0005657;replication fork;0.028397169454945!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0286614073557313!GO:0051336;regulation of hydrolase activity;0.028838609677822!GO:0031647;regulation of protein stability;0.028909494379901!GO:0030663;COPI coated vesicle membrane;0.029327643731881!GO:0030126;COPI vesicle coat;0.029327643731881!GO:0005777;peroxisome;0.0298976089211344!GO:0042579;microbody;0.0298976089211344!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0300638238555666!GO:0000726;non-recombinational repair;0.0303664699483119!GO:0016763;transferase activity, transferring pentosyl groups;0.0303664699483119!GO:0042608;T cell receptor binding;0.0303664699483119!GO:0000287;magnesium ion binding;0.0317708869265333!GO:0000776;kinetochore;0.0317708869265333!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0320062812249238!GO:0016605;PML body;0.0323491530786783!GO:0016279;protein-lysine N-methyltransferase activity;0.0333341719215217!GO:0018024;histone-lysine N-methyltransferase activity;0.0333341719215217!GO:0016278;lysine N-methyltransferase activity;0.0333341719215217!GO:0000118;histone deacetylase complex;0.0335621204008677!GO:0022403;cell cycle phase;0.0338150376661625!GO:0006914;autophagy;0.0340427119381317!GO:0031124;mRNA 3'-end processing;0.0344438639850405!GO:0008320;protein transmembrane transporter activity;0.0345227223055412!GO:0046822;regulation of nucleocytoplasmic transport;0.0347114595782689!GO:0048002;antigen processing and presentation of peptide antigen;0.0349742362066827!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0351167594279423!GO:0008094;DNA-dependent ATPase activity;0.0356496973508223!GO:0006595;polyamine metabolic process;0.0356550440097274!GO:0046854;phosphoinositide phosphorylation;0.0361299074266123!GO:0016791;phosphoric monoester hydrolase activity;0.0365298044663863!GO:0051251;positive regulation of lymphocyte activation;0.0366958315901033!GO:0000090;mitotic anaphase;0.0366958315901033!GO:0051322;anaphase;0.0366958315901033!GO:0009451;RNA modification;0.036806358689598!GO:0005832;chaperonin-containing T-complex;0.0371287524402966!GO:0004659;prenyltransferase activity;0.0379791035424667!GO:0045947;negative regulation of translational initiation;0.038852870952269!GO:0009967;positive regulation of signal transduction;0.0391828777596104!GO:0015923;mannosidase activity;0.0391916664198596!GO:0004402;histone acetyltransferase activity;0.0397006289925553!GO:0004468;lysine N-acetyltransferase activity;0.0397006289925553!GO:0008180;signalosome;0.0397070690052201!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0406111126138754!GO:0046426;negative regulation of JAK-STAT cascade;0.0406992943973269!GO:0019901;protein kinase binding;0.0407441689069076!GO:0050870;positive regulation of T cell activation;0.040878116326959!GO:0004003;ATP-dependent DNA helicase activity;0.0409534515374027!GO:0030833;regulation of actin filament polymerization;0.041110269334342!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0411171496871316!GO:0015630;microtubule cytoskeleton;0.0412986213723682!GO:0046834;lipid phosphorylation;0.0416524604436797!GO:0031123;RNA 3'-end processing;0.0418930620401419!GO:0008213;protein amino acid alkylation;0.0433562446792237!GO:0006479;protein amino acid methylation;0.0433562446792237!GO:0007034;vacuolar transport;0.0434470850513718!GO:0042802;identical protein binding;0.0434470850513718!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0441315258039144!GO:0008173;RNA methyltransferase activity;0.0441315258039144!GO:0000123;histone acetyltransferase complex;0.0442236224594337!GO:0031902;late endosome membrane;0.0444130093741487!GO:0002378;immunoglobulin biosynthetic process;0.0452786312413382!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0452786312413382!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0452786312413382!GO:0022884;macromolecule transmembrane transporter activity;0.0452786312413382!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0452786312413382!GO:0019904;protein domain specific binding;0.0456924516773381!GO:0051235;maintenance of localization;0.046317773837022!GO:0006301;postreplication repair;0.0467265809146307!GO:0000087;M phase of mitotic cell cycle;0.0470783546396147!GO:0030127;COPII vesicle coat;0.0472343336197645!GO:0012507;ER to Golgi transport vesicle membrane;0.0472343336197645!GO:0006144;purine base metabolic process;0.0472343336197645!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0480155412510842!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.0486259037179254!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.0486259037179254!GO:0009126;purine nucleoside monophosphate metabolic process;0.0486259037179254!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.0486259037179254!GO:0051920;peroxiredoxin activity;0.0489954884202973!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0491505455132978!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0491505455132978!GO:0051452;cellular pH reduction;0.0493722432664836!GO:0051453;regulation of cellular pH;0.0493722432664836!GO:0045851;pH reduction;0.0493722432664836!GO:0035258;steroid hormone receptor binding;0.0498552555153776 | |||
|sample_id=11795 | |sample_id=11795 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=FOX{D1,D2}:2.93005688477;PAX3,7:2.92016393468;CREB1:2.69351842472;CDX1,2,4:2.5232822633;BPTF:2.43220276335;RUNX1..3:2.31411520212;ELF1,2,4:2.23323208591;PDX1:2.20101749793;FOXO1,3,4:2.05190339211;RFX2..5_RFXANK_RFXAP:1.87451143445;ATF5_CREB3:1.72666350361;DMAP1_NCOR{1,2}_SMARC:1.7103464691;ETS1,2:1.6894328694;ZBTB16:1.62366683761;ATF4:1.52352719418;ELK1,4_GABP{A,B1}:1.51541619938;FOX{F1,F2,J1}:1.46469356749;PBX1:1.45694148141;TLX2:1.44240227443;FOXN1:1.43957077285;PAX6:1.40062401815;HMX1:1.36909432893;NKX6-1,2:1.31462835487;RFX1:1.28963932912;LEF1_TCF7_TCF7L1,2:1.22656809582;BREu{core}:1.18056985685;PAX4:1.17007577589;FOX{I1,J2}:1.16714691222;TGIF1:1.14928775643;IKZF2:1.12948426809;T:1.06578309993;RORA:1.03741659064;PITX1..3:1.02002067862;IRF1,2:0.979443796054;ATF2:0.963621359147;HIF1A:0.939590026384;SPI1:0.936491365493;FOXP1:0.889447091645;GATA6:0.877146613259;NKX2-1,4:0.832305829431;ZEB1:0.814529737442;SPIB:0.805751597996;AHR_ARNT_ARNT2:0.798921455358;PAX2:0.785117223317;STAT1,3:0.717060467434;SPZ1:0.669537226381;SOX2:0.668475057144;JUN:0.634286186835;YY1:0.633983482302;SOX5:0.61647100339;HBP1_HMGB_SSRP1_UBTF:0.584676449299;NFIX:0.495703043176;CUX2:0.40848820673;NRF1:0.393592801036;IRF7:0.360866364339;SNAI1..3:0.358910660914;ATF6:0.347018198135;STAT5{A,B}:0.320408720821;HOX{A6,A7,B6,B7}:0.214508931499;ALX1:0.19780755143;FOXQ1:0.172975387673;LMO2:0.162131019034;POU1F1:0.155291885316;NKX3-1:0.154924218639;CRX:0.128109406626;NANOG:0.119190437282;NKX2-2,8:0.105120280167;SREBF1,2:0.0751164301254;NFIL3:0.0208621517317;NANOG{mouse}:0.00481240226462;NR5A1,2:0.000332032836471;FOXA2:-0.0236776298714;NFKB1_REL_RELA:-0.0433275716769;TAL1_TCF{3,4,12}:-0.0439716642694;OCT4_SOX2{dimer}:-0.045912028422;MAFB:-0.060596543082;ZNF143:-0.0696951942102;FOXD3:-0.104203051777;POU2F1..3:-0.123459122797;VSX1,2:-0.15684378263;MYB:-0.160922216848;HOXA9_MEIS1:-0.192588775165;NFATC1..3:-0.195032406492;NFE2L1:-0.19688818225;AIRE:-0.211314945546;HES1:-0.223924231005;EVI1:-0.226454825494;RBPJ:-0.237210395583;EP300:-0.23743065682;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.247059463247;MYOD1:-0.247447960702;POU3F1..4:-0.252626685675;EGR1..3:-0.299980665796;NFY{A,B,C}:-0.326172835198;HNF1A:-0.331730742934;PRRX1,2:-0.35622285164;AR:-0.359785473946;TOPORS:-0.384760938598;E2F1..5:-0.390889144058;DBP:-0.44669932238;HNF4A_NR2F1,2:-0.479833861598;MYFfamily:-0.485758203194;ADNP_IRX_SIX_ZHX:-0.491980616639;HAND1,2:-0.520430492921;NHLH1,2:-0.523697300141;PAX5:-0.530073900283;TBX4,5:-0.564205988693;FOSL2:-0.592644923482;GLI1..3:-0.607548299632;SMAD1..7,9:-0.618758320788;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.620257951018;STAT2,4,6:-0.63293325455;MEF2{A,B,C,D}:-0.661411903768;HLF:-0.680080224187;RREB1:-0.692938421083;CEBPA,B_DDIT3:-0.701677073576;ARID5B:-0.70236307866;HMGA1,2:-0.70369721461;PAX8:-0.721357941495;GFI1:-0.733780292954;SOX{8,9,10}:-0.797173444169;GFI1B:-0.800943671578;SOX17:-0.802541979293;BACH2:-0.81128557543;FOS_FOS{B,L1}_JUN{B,D}:-0.817367971341;NR6A1:-0.823987291285;MZF1:-0.844335751778;MED-1{core}:-0.857996687427;ZFP161:-0.869932218219;PPARG:-0.944436204403;MYBL2:-0.961464472357;FOXP3:-0.975655553556;ALX4:-0.977587653042;GCM1,2:-0.986551566575;FOXM1:-0.989429009513;XBP1:-0.994936076933;MTE{core}:-1.00500041061;REST:-1.02587286585;ZNF148:-1.03044424942;NFE2:-1.04941565319;MTF1:-1.0512290803;ZNF238:-1.06087381708;bHLH_family:-1.07500398945;PRDM1:-1.09185974455;ZNF384:-1.10623822557;ZBTB6:-1.11991416357;LHX3,4:-1.15651090625;FOXL1:-1.19786963642;POU6F1:-1.19922844422;SRF:-1.24061226836;UFEwm:-1.24360673292;TP53:-1.25808846203;PATZ1:-1.28404147063;GATA4:-1.30107185301;EBF1:-1.32144269819;NKX2-3_NKX2-5:-1.34028846867;NR3C1:-1.3702676998;MAZ:-1.37040302205;RXRA_VDR{dimer}:-1.37921587081;ZNF423:-1.39949257197;HOX{A5,B5}:-1.41513014979;TEF:-1.43558693329;RXR{A,B,G}:-1.46423239446;NFE2L2:-1.4847002929;NKX3-2:-1.52342357414;TFAP4:-1.52700088051;POU5F1:-1.55639313108;GZF1:-1.55820297352;KLF4:-1.57539892594;GTF2I:-1.58431052319;GTF2A1,2:-1.59340640091;HIC1:-1.60517181087;ONECUT1,2:-1.60736489426;EN1,2:-1.62324825975;XCPE1{core}:-1.62435236951;CDC5L:-1.62831640872;HOX{A4,D4}:-1.64748392722;TLX1..3_NFIC{dimer}:-1.65510596907;TEAD1:-1.66585816441;SP1:-1.72047437232;TFCP2:-1.74062642933;NR1H4:-1.76521008971;TFDP1:-1.79681872617;TFAP2B:-1.80389402151;ESR1:-1.80920256331;ZIC1..3:-1.90275139874;TFAP2{A,C}:-1.94995601265;PAX1,9:-2.07298515544;ESRRA:-2.11534147052;TBP:-2.19430180858;HSF1,2:-2.38434276843;IKZF1:-2.7250353178 | |top_motifs=FOX{D1,D2}:2.93005688477;PAX3,7:2.92016393468;CREB1:2.69351842472;CDX1,2,4:2.5232822633;BPTF:2.43220276335;RUNX1..3:2.31411520212;ELF1,2,4:2.23323208591;PDX1:2.20101749793;FOXO1,3,4:2.05190339211;RFX2..5_RFXANK_RFXAP:1.87451143445;ATF5_CREB3:1.72666350361;DMAP1_NCOR{1,2}_SMARC:1.7103464691;ETS1,2:1.6894328694;ZBTB16:1.62366683761;ATF4:1.52352719418;ELK1,4_GABP{A,B1}:1.51541619938;FOX{F1,F2,J1}:1.46469356749;PBX1:1.45694148141;TLX2:1.44240227443;FOXN1:1.43957077285;PAX6:1.40062401815;HMX1:1.36909432893;NKX6-1,2:1.31462835487;RFX1:1.28963932912;LEF1_TCF7_TCF7L1,2:1.22656809582;BREu{core}:1.18056985685;PAX4:1.17007577589;FOX{I1,J2}:1.16714691222;TGIF1:1.14928775643;IKZF2:1.12948426809;T:1.06578309993;RORA:1.03741659064;PITX1..3:1.02002067862;IRF1,2:0.979443796054;ATF2:0.963621359147;HIF1A:0.939590026384;SPI1:0.936491365493;FOXP1:0.889447091645;GATA6:0.877146613259;NKX2-1,4:0.832305829431;ZEB1:0.814529737442;SPIB:0.805751597996;AHR_ARNT_ARNT2:0.798921455358;PAX2:0.785117223317;STAT1,3:0.717060467434;SPZ1:0.669537226381;SOX2:0.668475057144;JUN:0.634286186835;YY1:0.633983482302;SOX5:0.61647100339;HBP1_HMGB_SSRP1_UBTF:0.584676449299;NFIX:0.495703043176;CUX2:0.40848820673;NRF1:0.393592801036;IRF7:0.360866364339;SNAI1..3:0.358910660914;ATF6:0.347018198135;STAT5{A,B}:0.320408720821;HOX{A6,A7,B6,B7}:0.214508931499;ALX1:0.19780755143;FOXQ1:0.172975387673;LMO2:0.162131019034;POU1F1:0.155291885316;NKX3-1:0.154924218639;CRX:0.128109406626;NANOG:0.119190437282;NKX2-2,8:0.105120280167;SREBF1,2:0.0751164301254;NFIL3:0.0208621517317;NANOG{mouse}:0.00481240226462;NR5A1,2:0.000332032836471;FOXA2:-0.0236776298714;NFKB1_REL_RELA:-0.0433275716769;TAL1_TCF{3,4,12}:-0.0439716642694;OCT4_SOX2{dimer}:-0.045912028422;MAFB:-0.060596543082;ZNF143:-0.0696951942102;FOXD3:-0.104203051777;POU2F1..3:-0.123459122797;VSX1,2:-0.15684378263;MYB:-0.160922216848;HOXA9_MEIS1:-0.192588775165;NFATC1..3:-0.195032406492;NFE2L1:-0.19688818225;AIRE:-0.211314945546;HES1:-0.223924231005;EVI1:-0.226454825494;RBPJ:-0.237210395583;EP300:-0.23743065682;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.247059463247;MYOD1:-0.247447960702;POU3F1..4:-0.252626685675;EGR1..3:-0.299980665796;NFY{A,B,C}:-0.326172835198;HNF1A:-0.331730742934;PRRX1,2:-0.35622285164;AR:-0.359785473946;TOPORS:-0.384760938598;E2F1..5:-0.390889144058;DBP:-0.44669932238;HNF4A_NR2F1,2:-0.479833861598;MYFfamily:-0.485758203194;ADNP_IRX_SIX_ZHX:-0.491980616639;HAND1,2:-0.520430492921;NHLH1,2:-0.523697300141;PAX5:-0.530073900283;TBX4,5:-0.564205988693;FOSL2:-0.592644923482;GLI1..3:-0.607548299632;SMAD1..7,9:-0.618758320788;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.620257951018;STAT2,4,6:-0.63293325455;MEF2{A,B,C,D}:-0.661411903768;HLF:-0.680080224187;RREB1:-0.692938421083;CEBPA,B_DDIT3:-0.701677073576;ARID5B:-0.70236307866;HMGA1,2:-0.70369721461;PAX8:-0.721357941495;GFI1:-0.733780292954;SOX{8,9,10}:-0.797173444169;GFI1B:-0.800943671578;SOX17:-0.802541979293;BACH2:-0.81128557543;FOS_FOS{B,L1}_JUN{B,D}:-0.817367971341;NR6A1:-0.823987291285;MZF1:-0.844335751778;MED-1{core}:-0.857996687427;ZFP161:-0.869932218219;PPARG:-0.944436204403;MYBL2:-0.961464472357;FOXP3:-0.975655553556;ALX4:-0.977587653042;GCM1,2:-0.986551566575;FOXM1:-0.989429009513;XBP1:-0.994936076933;MTE{core}:-1.00500041061;REST:-1.02587286585;ZNF148:-1.03044424942;NFE2:-1.04941565319;MTF1:-1.0512290803;ZNF238:-1.06087381708;bHLH_family:-1.07500398945;PRDM1:-1.09185974455;ZNF384:-1.10623822557;ZBTB6:-1.11991416357;LHX3,4:-1.15651090625;FOXL1:-1.19786963642;POU6F1:-1.19922844422;SRF:-1.24061226836;UFEwm:-1.24360673292;TP53:-1.25808846203;PATZ1:-1.28404147063;GATA4:-1.30107185301;EBF1:-1.32144269819;NKX2-3_NKX2-5:-1.34028846867;NR3C1:-1.3702676998;MAZ:-1.37040302205;RXRA_VDR{dimer}:-1.37921587081;ZNF423:-1.39949257197;HOX{A5,B5}:-1.41513014979;TEF:-1.43558693329;RXR{A,B,G}:-1.46423239446;NFE2L2:-1.4847002929;NKX3-2:-1.52342357414;TFAP4:-1.52700088051;POU5F1:-1.55639313108;GZF1:-1.55820297352;KLF4:-1.57539892594;GTF2I:-1.58431052319;GTF2A1,2:-1.59340640091;HIC1:-1.60517181087;ONECUT1,2:-1.60736489426;EN1,2:-1.62324825975;XCPE1{core}:-1.62435236951;CDC5L:-1.62831640872;HOX{A4,D4}:-1.64748392722;TLX1..3_NFIC{dimer}:-1.65510596907;TEAD1:-1.66585816441;SP1:-1.72047437232;TFCP2:-1.74062642933;NR1H4:-1.76521008971;TFDP1:-1.79681872617;TFAP2B:-1.80389402151;ESR1:-1.80920256331;ZIC1..3:-1.90275139874;TFAP2{A,C}:-1.94995601265;PAX1,9:-2.07298515544;ESRRA:-2.11534147052;TBP:-2.19430180858;HSF1,2:-2.38434276843;IKZF1:-2.7250353178 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11795-124C4;search_select_hide=table117:FF:11795-124C4 | |||
}} | }} | ||
Latest revision as of 18:20, 4 June 2020
| Name: | CD4+CD25-CD45RA+ naive conventional T cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13205 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13205
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13205
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.432 |
| 10 | 10 | 0.0133 |
| 100 | 100 | 0.478 |
| 101 | 101 | 0.172 |
| 102 | 102 | 0.896 |
| 103 | 103 | 0.701 |
| 104 | 104 | 0.941 |
| 105 | 105 | 0.568 |
| 106 | 106 | 0.826 |
| 107 | 107 | 0.00296 |
| 108 | 108 | 0.4 |
| 109 | 109 | 0.311 |
| 11 | 11 | 0.3 |
| 110 | 110 | 0.947 |
| 111 | 111 | 0.528 |
| 112 | 112 | 0.85 |
| 113 | 113 | 0.427 |
| 114 | 114 | 0.507 |
| 115 | 115 | 0.112 |
| 116 | 116 | 0.331 |
| 117 | 117 | 0.002 |
| 118 | 118 | 0.281 |
| 119 | 119 | 0.233 |
| 12 | 12 | 0.708 |
| 120 | 120 | 0.873 |
| 121 | 121 | 0.848 |
| 122 | 122 | 0.936 |
| 123 | 123 | 4.11276e-5 |
| 124 | 124 | 0.403 |
| 125 | 125 | 0.78 |
| 126 | 126 | 0.801 |
| 127 | 127 | 0.84 |
| 128 | 128 | 0.535 |
| 129 | 129 | 0.556 |
| 13 | 13 | 0.644 |
| 130 | 130 | 0.366 |
| 131 | 131 | 0.287 |
| 132 | 132 | 0.568 |
| 133 | 133 | 0.533 |
| 134 | 134 | 0.411 |
| 135 | 135 | 0.923 |
| 136 | 136 | 0.729 |
| 137 | 137 | 0.0711 |
| 138 | 138 | 0.304 |
| 139 | 139 | 0.061 |
| 14 | 14 | 0.653 |
| 140 | 140 | 0.158 |
| 141 | 141 | 0.463 |
| 142 | 142 | 0.278 |
| 143 | 143 | 0.026 |
| 144 | 144 | 0.753 |
| 145 | 145 | 0.841 |
| 146 | 146 | 0.675 |
| 147 | 147 | 0.011 |
| 148 | 148 | 0.468 |
| 149 | 149 | 0.369 |
| 15 | 15 | 0.288 |
| 150 | 150 | 0.945 |
| 151 | 151 | 0.623 |
| 152 | 152 | 0.16 |
| 153 | 153 | 0.791 |
| 154 | 154 | 0.303 |
| 155 | 155 | 0.0271 |
| 156 | 156 | 0.909 |
| 157 | 157 | 0.324 |
| 158 | 158 | 0.0191 |
| 159 | 159 | 0.448 |
| 16 | 16 | 0.418 |
| 160 | 160 | 0.414 |
| 161 | 161 | 0.591 |
| 162 | 162 | 0.174 |
| 163 | 163 | 0.481 |
| 164 | 164 | 0.0935 |
| 165 | 165 | 0.657 |
| 166 | 166 | 0.481 |
| 167 | 167 | 0.0537 |
| 168 | 168 | 0.939 |
| 169 | 169 | 0.188 |
| 17 | 17 | 0.495 |
| 18 | 18 | 0.632 |
| 19 | 19 | 0.0686 |
| 2 | 2 | 0.345 |
| 20 | 20 | 0.426 |
| 21 | 21 | 0.533 |
| 22 | 22 | 0.348 |
| 23 | 23 | 0.207 |
| 24 | 24 | 0.636 |
| 25 | 25 | 0.0986 |
| 26 | 26 | 0.849 |
| 27 | 27 | 0.548 |
| 28 | 28 | 0.621 |
| 29 | 29 | 0.0221 |
| 3 | 3 | 0.143 |
| 30 | 30 | 0.0929 |
| 31 | 31 | 0.662 |
| 32 | 32 | 0.0214 |
| 33 | 33 | 0.218 |
| 34 | 34 | 0.321 |
| 35 | 35 | 0.139 |
| 36 | 36 | 0.0237 |
| 37 | 37 | 0.355 |
| 38 | 38 | 0.854 |
| 39 | 39 | 0.207 |
| 4 | 4 | 0.771 |
| 40 | 40 | 0.852 |
| 41 | 41 | 0.249 |
| 42 | 42 | 0.124 |
| 43 | 43 | 0.576 |
| 44 | 44 | 0.999 |
| 45 | 45 | 0.244 |
| 46 | 46 | 0.514 |
| 47 | 47 | 0.158 |
| 48 | 48 | 0.377 |
| 49 | 49 | 0.13 |
| 5 | 5 | 0.476 |
| 50 | 50 | 0.43 |
| 51 | 51 | 0.908 |
| 52 | 52 | 0.22 |
| 53 | 53 | 0.492 |
| 54 | 54 | 0.967 |
| 55 | 55 | 0.522 |
| 56 | 56 | 0.992 |
| 57 | 57 | 0.561 |
| 58 | 58 | 0.17 |
| 59 | 59 | 0.437 |
| 6 | 6 | 0.76 |
| 60 | 60 | 0.949 |
| 61 | 61 | 0.0721 |
| 62 | 62 | 0.2 |
| 63 | 63 | 0.916 |
| 64 | 64 | 0.587 |
| 65 | 65 | 0.558 |
| 66 | 66 | 0.64 |
| 67 | 67 | 0.74 |
| 68 | 68 | 0.414 |
| 69 | 69 | 0.986 |
| 7 | 7 | 0.462 |
| 70 | 70 | 0.035 |
| 71 | 71 | 0.147 |
| 72 | 72 | 0.173 |
| 73 | 73 | 0.715 |
| 74 | 74 | 0.593 |
| 75 | 75 | 0.0114 |
| 76 | 76 | 0.0721 |
| 77 | 77 | 0.0235 |
| 78 | 78 | 0.668 |
| 79 | 79 | 0.583 |
| 8 | 8 | 0.806 |
| 80 | 80 | 0.0325 |
| 81 | 81 | 0.314 |
| 82 | 82 | 0.251 |
| 83 | 83 | 0.766 |
| 84 | 84 | 0.618 |
| 85 | 85 | 0.377 |
| 86 | 86 | 0.314 |
| 87 | 87 | 0.648 |
| 88 | 88 | 0.942 |
| 89 | 89 | 0.0532 |
| 9 | 9 | 0.702 |
| 90 | 90 | 0.0267 |
| 91 | 91 | 0.621 |
| 92 | 92 | 0.897 |
| 93 | 93 | 0.72 |
| 94 | 94 | 0.294 |
| 95 | 95 | 0.3 |
| 96 | 96 | 0.391 |
| 97 | 97 | 0.358 |
| 98 | 98 | 0.199 |
| 99 | 99 | 0.00114 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13205
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
