FF:11752-123G6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005347 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008551;DRR009423;DRZ000848;DRZ002233;DRZ012198;DRZ013583 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007100,UBERON:0000948,UBERON:0002384,UBERON:0000479,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0002494,CL:0000034,CL:0000569 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000271 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/mesenchymal%2520precursor%2520cell%2520-%2520cardiac%252c%2520donor1.CNhs12368.11752-123G6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11752-123G6 | |id=FF:11752-123G6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000271 | ||
|is_obsolete= | |||
|library_id=CNhs12368 | |||
|library_id_phase_based=2:CNhs12368 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11752 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11752 | |||
|name=mesenchymal precursor cell - cardiac, donor1 | |name=mesenchymal precursor cell - cardiac, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12368,LSID914,release011,COMPLETED | |profile_hcage=CNhs12368,LSID914,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.0033442057847784,0,-0.0665695356662943,0.122756878678907,0,0,0,0,0,0,0,0,0,0,0,0.163662235871164,0,0.221982123509992,0,0,0.0447476819101155,0,0,0.353939101034121,0,0,-0.0434612259586314,0,0,0,0,0,0,0,0,0,0,0.895709883844423,0,-0.0640685990304306,0.089495363820231,0,0,0,0,0,0,0,0.057616096822748,0,0,0,0,0,0,0,0.185258114249975,0,0,0.129647921365959,0,0,0,0,0,0,0,0,0.089495363820231,0,0,0,0,0,0,0,0,0,0,0,0.00335437403101956,0,0,0,0,0.0447476819101155,0,0,-0.146745780426449,-0.121702038875638,0,0.089495363820231,0,0,-0.00853998741747551,0.132218979760309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0145424759868787,0,0,0,0,-0.122250741667821,0,0,0.0236333372088193,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.00853998741747551,0,0,0,0,0,0.089495363820231,0,0,0.089495363820231,0,0,0.0840864856575309,0,-0.142820857808913,0.0201470933476926,0,0,-0.0552909476880518,0,0,0,0,0.089495363820231,0,0,0.089495363820231,0,0.792153880238483,0,-0.0504125515893149,0.0295716958073449,0.163662235871164,0,0,0.0894348075163205,0.0698329029600124,0,-0.0086253806779621,-0.0683442610773682,0,0,0,0,0.195895366960414,0,0.16137099169884,-0.0827201683234173,0,0.0014665566894485,-0.055712496781182,0,0,0,0.217465383828013,-0.086325325982658,0,0,-0.0082840774623461,-0.0547708187149615,0,0,0.595544558384719,0,0.538677755487745,0.190611132414479,0,-0.12076683263742,0,0,0,0,0,0,0,0,0,0,0,0.165462888860436,0.00427676426412643,0,0,0,0,0.0833002724162708,0,0,0.423518553980464,0.106370406079306,0,-0.214999766003038,0,-0.302389727009913,0.0897717748519156,-0.246931450259745,-0.231414666096166,0.0795896992079171,0.519213695093914,0,-0.0293257046439502,-0.186944139578922,-0.0584745194971535,-0.0775074718413307,-0.168913278608069,0.405434428121132,0.151146791855057,0,0,0,0.200445569098348,0,-0.274098147524641,-0.114809580618354,-0.017687890652149,0.0749515337864256,-0.222416432596804,-0.063120135727237,-0.374035066876493,0.0499628353635604,0.141892036638495,0,0.398596238238873,0,0,-0.0208998310971493,0.0104095833938569,-0.268927377243341,-0.0988414433146974,0,-0.256985913231925,-0.0683442610773682,0,-0.029376604183013,-0.171018878228035,0,0,-0.163489888145915,0,0,0,0,0,-0.127824176349441,0.149841686220149,-0.232855561555545,0,-0.150776848528454,0,-0.131653399881039,0,-0.326959943534144,0.0176523384137703,0,-0.102234733562026,0,-0.0716708627888703,-0.123084726012261,0.083376208153262,-0.332899441571507,-0.0584468268118252,0.0159132424812047,-0.0847426393906886,0.0100093397690091,-0.0996060355399107,-0.116907192589313,0.558531810165246,0,0.178158097511842,-0.0109779311178742,-0.109066064703528,-0.061617237048537,0,-0.172328768359379,0,0.0473652361662877,0,-0.333764034216402,-0.313442202894185,-0.212297826001631,-0.0380128410376945,0,-0.197931035451522,0.406265847782959,0,0.0895666126552381,0,0,-0.0608717195144084,0.0304922893218733,-0.0163235356394791,-0.0571583387436124,0,0.350272108727212,0,0.163662235871164,0.234268768372355,-0.0084844891853331,0,-0.0687562099035645,-0.1939155714879,-0.188928698469798,-0.0264757096147031,0,0,-0.363449862500144,0,0,0.103267350825731,0.0325177712253095,-0.337532848466053,-0.163830977666525,0,-0.108622809454255,0,0,0.104722709527405,0,0.193394228613439,0,0.089495363820231,0.288943972001192,0.203946965940609,0,0.0447476819101155,0.163662235871164,0,0,0,0,0,0,0,0,-0.560952893036804,0.162151399647534,0,0,0,0,0,0.163662235871164,0,0.21771003317384,0,0.163662235871164,0.301696760527897,-0.0337892583217054,-0.0335220518561894,0,0,0,0,0.330478693896994,-0.113741198274493,0,-0.0423673426774008,0,0,0,0,0.00335437403101956,0,0,0,0,-0.057730457053664,0.00252895096168395,0,0,0,0.174942595700388,0,0,0.37530513385842,0,0.0365734420393851,0,0,0.401701174036443,0,0.05903097578147,0.00791348427338948,0,-0.192993932059602,-0.128627735746942,0.154978413687008,0,0,-0.171851767969657,0,0.089495363820231,0.0589459947448974,-0.0508669361129416,0.089495363820231,0,0,0,0,0,0,0,0.0679359630928247,0,0,0,0,0,0,0,0,0,0,0,0.163719144852605,-0.00272869283827951,0.281829899300949,0,0,0,0,0,0,0.38473578674844,-0.241201597474605,0,0,0,0,0,0.089495363820231,0,0,-0.244434391084186,0,0,0,0,0,0.185258114249975,0,0,0,0,0.0818515214866502,0,0,-0.187866768373283,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.0665695356662943,0,0,0,0,0,0,0,-0.0478417496270349,0,0.163662235871164,0,0,0.113107174870078,0,0,0,0.058865851082008,0,0.0033442057847784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207643671362748,0,0,0,0.39877692112067,0.0199721031298931,0,-0.105984503269077,0,0,0.0404726955921925,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0732234972998692,0,0,0,0,0.28225047549258,0,0,0.353939101034121,0.089495363820231,0,0.134958738778529,0,0,0,0,0,0,0.0683484645314936,0.151616072682795,0.0885680082203947,0,0,0,0.086739665263835,0,0,-0.0321170400846041,0,0.264487973524194,0,0,0,0,0,0,0,0,0.163662235871164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221982123509992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163662235871164,0,0.415287342725497,0.081831117935582,0,0,0,0,0,0.163662235871164,0.0107363186346989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.089495363820231,0.146973080310417,0,0,0,0.0691642458355367,0,0,0,0,0,0,0.163662235871164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.089495363820231,0,-0.123178391457814,0,0,0,0,0,0,0,0,0.895709883844423,0,0,0,0,0.11544016063211,0,0.0792856036411374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246300667421318,0,0,0,0,0.0418582531593121,0,0,0,0,0,0,0.986589139936354,-0.0426808158917377,0,0,0.827434005891788,0,0,0,0,0,0,0,0,0,0,0.292591488161963,0,0,0.0756216453924461,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,0.1152321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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=34.92525 | |rna_weight_ug=34.92525 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.73575234031302e-226!GO:0005737;cytoplasm;5.10466931660711e-184!GO:0044444;cytoplasmic part;1.7332857575946e-148!GO:0043231;intracellular membrane-bound organelle;3.93977153215821e-144!GO:0043227;membrane-bound organelle;7.30655620083082e-144!GO:0043226;organelle;2.48386042570342e-140!GO:0043229;intracellular organelle;4.80821246858677e-140!GO:0044422;organelle part;3.36341786525333e-103!GO:0044446;intracellular organelle part;8.86442111773286e-102!GO:0030529;ribonucleoprotein complex;5.97231150236943e-74!GO:0032991;macromolecular complex;3.12815614029407e-70!GO:0044238;primary metabolic process;3.80791444054507e-70!GO:0044237;cellular metabolic process;6.15882609356907e-70!GO:0005515;protein binding;2.08548715376715e-64!GO:0005739;mitochondrion;9.32124350170609e-63!GO:0043170;macromolecule metabolic process;4.5342990186722e-61!GO:0031090;organelle membrane;2.15712929547175e-56!GO:0043233;organelle lumen;2.36413085813886e-55!GO:0031974;membrane-enclosed lumen;2.36413085813886e-55!GO:0003723;RNA binding;2.80493455284357e-55!GO:0019538;protein metabolic process;1.9984592084824e-51!GO:0005840;ribosome;8.80241313062511e-49!GO:0006412;translation;1.11045035742618e-46!GO:0044260;cellular macromolecule metabolic process;4.14287752925882e-46!GO:0009058;biosynthetic process;1.15373215622364e-45!GO:0044428;nuclear part;2.26939134431745e-45!GO:0044267;cellular protein metabolic process;3.22813331008226e-45!GO:0015031;protein transport;4.19915961096531e-44!GO:0003735;structural constituent of ribosome;4.05933602161166e-43!GO:0033036;macromolecule localization;1.06681855241624e-42!GO:0005829;cytosol;5.48191550469015e-42!GO:0045184;establishment of protein localization;1.67718669857329e-41!GO:0044429;mitochondrial part;4.67450538936013e-41!GO:0008104;protein localization;1.14475160013822e-40!GO:0009059;macromolecule biosynthetic process;3.54944132575205e-39!GO:0044249;cellular biosynthetic process;7.73148588399542e-39!GO:0033279;ribosomal subunit;8.5399244976998e-39!GO:0006396;RNA processing;1.82009138798572e-36!GO:0005634;nucleus;4.71977899132578e-36!GO:0031967;organelle envelope;9.33510592856675e-35!GO:0031975;envelope;2.13456125669506e-34!GO:0043234;protein complex;1.62484083149771e-32!GO:0016043;cellular component organization and biogenesis;8.83110085182737e-32!GO:0046907;intracellular transport;1.5689272074826e-30!GO:0005783;endoplasmic reticulum;3.54319633477094e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.23780164618869e-29!GO:0016071;mRNA metabolic process;1.02960470482477e-28!GO:0006886;intracellular protein transport;1.88460564086829e-28!GO:0031981;nuclear lumen;2.752464640753e-28!GO:0005740;mitochondrial envelope;1.54734235097926e-27!GO:0010467;gene expression;8.02818727892927e-27!GO:0043283;biopolymer metabolic process;2.704922283369e-26!GO:0008380;RNA splicing;2.7228056316807e-26!GO:0031966;mitochondrial membrane;4.98025267908572e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.75913937835364e-25!GO:0006397;mRNA processing;1.48914510077439e-24!GO:0012505;endomembrane system;2.32196053346644e-24!GO:0044432;endoplasmic reticulum part;2.34902213050615e-24!GO:0006457;protein folding;2.42875051891917e-24!GO:0019866;organelle inner membrane;1.01841547176088e-23!GO:0006119;oxidative phosphorylation;3.70621446221224e-23!GO:0044445;cytosolic part;4.95551777185762e-23!GO:0005743;mitochondrial inner membrane;8.70784582293135e-23!GO:0065003;macromolecular complex assembly;2.78350208568353e-21!GO:0015935;small ribosomal subunit;2.10559144523033e-20!GO:0044455;mitochondrial membrane part;1.19854610898302e-19!GO:0048770;pigment granule;2.13490376800803e-19!GO:0042470;melanosome;2.13490376800803e-19!GO:0015934;large ribosomal subunit;2.69778108010392e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.9114216752477e-19!GO:0051641;cellular localization;8.46598580555681e-19!GO:0051649;establishment of cellular localization;1.10371298493274e-18!GO:0022607;cellular component assembly;2.77151248251963e-18!GO:0005681;spliceosome;2.92540266668407e-18!GO:0051186;cofactor metabolic process;2.99908672919691e-18!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.98060525943411e-18!GO:0005794;Golgi apparatus;1.05058735319009e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.17531951793917e-17!GO:0016462;pyrophosphatase activity;1.23087060395457e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;1.70682905548821e-17!GO:0005789;endoplasmic reticulum membrane;3.5098583348571e-17!GO:0017111;nucleoside-triphosphatase activity;5.46134101150073e-17!GO:0005746;mitochondrial respiratory chain;6.95444055246727e-17!GO:0051082;unfolded protein binding;9.69267334944423e-17!GO:0005654;nucleoplasm;1.01947959551169e-16!GO:0031980;mitochondrial lumen;1.92189037831279e-16!GO:0005759;mitochondrial matrix;1.92189037831279e-16!GO:0022618;protein-RNA complex assembly;2.27569357921749e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;4.79974777293544e-16!GO:0000502;proteasome complex (sensu Eukaryota);6.00659511128408e-16!GO:0043285;biopolymer catabolic process;8.37458581103176e-16!GO:0019941;modification-dependent protein catabolic process;8.75679962952235e-16!GO:0043632;modification-dependent macromolecule catabolic process;8.75679962952235e-16!GO:0044257;cellular protein catabolic process;1.07921405038372e-15!GO:0044265;cellular macromolecule catabolic process;1.10847674403646e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.36481333447551e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.4988315385505e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.63108738596242e-15!GO:0016874;ligase activity;3.5353396981767e-15!GO:0006512;ubiquitin cycle;3.71526298325608e-15!GO:0006996;organelle organization and biogenesis;5.2534795381381e-15!GO:0030163;protein catabolic process;1.0849675300097e-14!GO:0009057;macromolecule catabolic process;1.24115524341486e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.34357697156468e-14!GO:0006732;coenzyme metabolic process;1.536211432102e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.04976458821622e-14!GO:0003954;NADH dehydrogenase activity;2.04976458821622e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.04976458821622e-14!GO:0044248;cellular catabolic process;3.00183069215573e-14!GO:0008134;transcription factor binding;3.11337360992107e-14!GO:0006605;protein targeting;3.84384268569244e-14!GO:0008135;translation factor activity, nucleic acid binding;5.08668263949955e-14!GO:0048193;Golgi vesicle transport;6.88494288879825e-14!GO:0005793;ER-Golgi intermediate compartment;7.29490158994869e-14!GO:0044451;nucleoplasm part;8.52327043441738e-14!GO:0000166;nucleotide binding;8.89633014817723e-14!GO:0005730;nucleolus;1.80633757306985e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.83243678874546e-13!GO:0005761;mitochondrial ribosome;4.38987265123524e-13!GO:0000313;organellar ribosome;4.38987265123524e-13!GO:0016192;vesicle-mediated transport;4.75193722518976e-13!GO:0042775;organelle ATP synthesis coupled electron transport;6.76559308365888e-13!GO:0042773;ATP synthesis coupled electron transport;6.76559308365888e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.23078290472776e-12!GO:0045271;respiratory chain complex I;1.23078290472776e-12!GO:0005747;mitochondrial respiratory chain complex I;1.23078290472776e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.90902591802997e-12!GO:0012501;programmed cell death;5.85190471893076e-12!GO:0009055;electron carrier activity;6.38180900094805e-12!GO:0043228;non-membrane-bound organelle;6.95320107498582e-12!GO:0043232;intracellular non-membrane-bound organelle;6.95320107498582e-12!GO:0006915;apoptosis;1.25679409539472e-11!GO:0043412;biopolymer modification;1.73954683415003e-11!GO:0003743;translation initiation factor activity;3.07806722293597e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.47883666287188e-11!GO:0006163;purine nucleotide metabolic process;7.28490213183767e-11!GO:0006413;translational initiation;9.22542694453431e-11!GO:0009259;ribonucleotide metabolic process;1.14453094604912e-10!GO:0008219;cell death;1.39270728690986e-10!GO:0016265;death;1.39270728690986e-10!GO:0009150;purine ribonucleotide metabolic process;1.48470494334591e-10!GO:0006464;protein modification process;1.80843865623004e-10!GO:0016491;oxidoreductase activity;4.30904965749556e-10!GO:0009199;ribonucleoside triphosphate metabolic process;5.29155024797516e-10!GO:0006164;purine nucleotide biosynthetic process;5.30118588891529e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.5082466337383e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.50956687512393e-10!GO:0009144;purine nucleoside triphosphate metabolic process;6.50956687512393e-10!GO:0005773;vacuole;7.42684756998272e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;8.9316530304384e-10!GO:0000375;RNA splicing, via transesterification reactions;8.9316530304384e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.9316530304384e-10!GO:0017076;purine nucleotide binding;9.02691167526244e-10!GO:0003676;nucleic acid binding;9.3838474689627e-10!GO:0051188;cofactor biosynthetic process;9.70679740174652e-10!GO:0009152;purine ribonucleotide biosynthetic process;1.03279286052771e-09!GO:0009141;nucleoside triphosphate metabolic process;1.09587982137991e-09!GO:0048523;negative regulation of cellular process;1.24849056068905e-09!GO:0015986;ATP synthesis coupled proton transport;1.44860299910227e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.44860299910227e-09!GO:0005768;endosome;1.50513308314207e-09!GO:0005788;endoplasmic reticulum lumen;1.60212637759045e-09!GO:0032553;ribonucleotide binding;1.6358531245824e-09!GO:0032555;purine ribonucleotide binding;1.6358531245824e-09!GO:0042254;ribosome biogenesis and assembly;1.6358531245824e-09!GO:0006446;regulation of translational initiation;2.28609219064345e-09!GO:0009260;ribonucleotide biosynthetic process;2.59269917693362e-09!GO:0009056;catabolic process;3.42041704773212e-09!GO:0019829;cation-transporting ATPase activity;3.42041704773212e-09!GO:0009142;nucleoside triphosphate biosynthetic process;3.60822693437749e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.60822693437749e-09!GO:0003712;transcription cofactor activity;4.20488667609966e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.44291970340509e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.44291970340509e-09!GO:0046034;ATP metabolic process;4.70132866171539e-09!GO:0016070;RNA metabolic process;6.80142854534022e-09!GO:0006259;DNA metabolic process;9.51245626738798e-09!GO:0003924;GTPase activity;1.10519069331493e-08!GO:0008565;protein transporter activity;1.18820983024752e-08!GO:0008639;small protein conjugating enzyme activity;1.25817574049568e-08!GO:0005635;nuclear envelope;1.68037734555318e-08!GO:0015078;hydrogen ion transmembrane transporter activity;1.9385797133579e-08!GO:0009060;aerobic respiration;2.0527617192557e-08!GO:0006888;ER to Golgi vesicle-mediated transport;2.06768418847209e-08!GO:0004842;ubiquitin-protein ligase activity;2.11370141387448e-08!GO:0000323;lytic vacuole;2.5278418532376e-08!GO:0005764;lysosome;2.5278418532376e-08!GO:0006754;ATP biosynthetic process;2.86054692016479e-08!GO:0006753;nucleoside phosphate metabolic process;2.86054692016479e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.14556271956957e-08!GO:0044431;Golgi apparatus part;4.19025418650698e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.25401823147935e-08!GO:0019787;small conjugating protein ligase activity;4.48358769146246e-08!GO:0009108;coenzyme biosynthetic process;4.7858373442979e-08!GO:0048519;negative regulation of biological process;5.24049160384435e-08!GO:0045333;cellular respiration;6.79949972964825e-08!GO:0016887;ATPase activity;6.95605569834597e-08!GO:0006399;tRNA metabolic process;7.29894164844915e-08!GO:0043687;post-translational protein modification;8.52644406575459e-08!GO:0031965;nuclear membrane;8.88649260029175e-08!GO:0030120;vesicle coat;9.93308534659297e-08!GO:0030662;coated vesicle membrane;9.93308534659297e-08!GO:0016881;acid-amino acid ligase activity;1.24415332229463e-07!GO:0043069;negative regulation of programmed cell death;1.26580496008154e-07!GO:0006913;nucleocytoplasmic transport;1.43695217099409e-07!GO:0016604;nuclear body;1.48524681609966e-07!GO:0006461;protein complex assembly;1.99113392238155e-07!GO:0042623;ATPase activity, coupled;2.01441377592457e-07!GO:0051169;nuclear transport;2.06511754592508e-07!GO:0043066;negative regulation of apoptosis;2.33474897983017e-07!GO:0051246;regulation of protein metabolic process;2.38612205002638e-07!GO:0007005;mitochondrion organization and biogenesis;2.48768048960055e-07!GO:0017038;protein import;2.81269090135701e-07!GO:0006916;anti-apoptosis;3.08448082774107e-07!GO:0043067;regulation of programmed cell death;3.51016419564217e-07!GO:0008654;phospholipid biosynthetic process;3.54139098733408e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.73414696652492e-07!GO:0016787;hydrolase activity;3.74287920893703e-07!GO:0044453;nuclear membrane part;4.11672321994576e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.22257585870139e-07!GO:0044440;endosomal part;4.5557959052167e-07!GO:0010008;endosome membrane;4.5557959052167e-07!GO:0042981;regulation of apoptosis;5.12527603943806e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.80535820467535e-07!GO:0009117;nucleotide metabolic process;6.63993851017992e-07!GO:0006752;group transfer coenzyme metabolic process;6.91324928529746e-07!GO:0006091;generation of precursor metabolites and energy;7.43761819703197e-07!GO:0005770;late endosome;7.76519605191871e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.21512609305275e-07!GO:0051187;cofactor catabolic process;1.03833656835024e-06!GO:0048475;coated membrane;1.04513987552965e-06!GO:0030117;membrane coat;1.04513987552965e-06!GO:0016607;nuclear speck;1.39583840226298e-06!GO:0051789;response to protein stimulus;1.4408405728008e-06!GO:0006986;response to unfolded protein;1.4408405728008e-06!GO:0006099;tricarboxylic acid cycle;1.6964583846835e-06!GO:0046356;acetyl-CoA catabolic process;1.6964583846835e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.77767485287666e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.78054912219557e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.78054912219557e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.78054912219557e-06!GO:0030554;adenyl nucleotide binding;1.92497309190399e-06!GO:0045454;cell redox homeostasis;2.10732586152948e-06!GO:0005524;ATP binding;2.12240747709671e-06!GO:0043038;amino acid activation;2.57647117705899e-06!GO:0006418;tRNA aminoacylation for protein translation;2.57647117705899e-06!GO:0043039;tRNA aminoacylation;2.57647117705899e-06!GO:0000139;Golgi membrane;2.65558446581306e-06!GO:0065002;intracellular protein transport across a membrane;2.83226285250066e-06!GO:0032559;adenyl ribonucleotide binding;2.86855956650531e-06!GO:0004298;threonine endopeptidase activity;2.8745143506907e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.94557334006436e-06!GO:0031988;membrane-bound vesicle;3.02077234241528e-06!GO:0009109;coenzyme catabolic process;3.06733400661355e-06!GO:0016023;cytoplasmic membrane-bound vesicle;3.1843421541084e-06!GO:0045259;proton-transporting ATP synthase complex;4.04080744951045e-06!GO:0006974;response to DNA damage stimulus;4.10658220101253e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.95083740208635e-06!GO:0008026;ATP-dependent helicase activity;5.30747723950818e-06!GO:0005525;GTP binding;5.3922283683494e-06!GO:0003714;transcription corepressor activity;5.45474774344327e-06!GO:0006084;acetyl-CoA metabolic process;6.60101829471307e-06!GO:0007049;cell cycle;7.19247096823413e-06!GO:0006364;rRNA processing;7.28186113474746e-06!GO:0006613;cotranslational protein targeting to membrane;7.48835531803447e-06!GO:0006366;transcription from RNA polymerase II promoter;8.01013833125564e-06!GO:0016072;rRNA metabolic process;8.86791754182047e-06!GO:0045786;negative regulation of progression through cell cycle;9.07490289116006e-06!GO:0016853;isomerase activity;9.80009443526156e-06!GO:0031982;vesicle;1.2759110620847e-05!GO:0031410;cytoplasmic vesicle;1.51323529926079e-05!GO:0031968;organelle outer membrane;1.67737374658026e-05!GO:0019843;rRNA binding;1.79918950606044e-05!GO:0004386;helicase activity;1.85037461255797e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.85058531382415e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.21242854041502e-05!GO:0019867;outer membrane;2.30608801621836e-05!GO:0032446;protein modification by small protein conjugation;2.36188961579593e-05!GO:0016859;cis-trans isomerase activity;2.47178417116667e-05!GO:0051726;regulation of cell cycle;2.6827413101406e-05!GO:0000245;spliceosome assembly;2.68312017866012e-05!GO:0005798;Golgi-associated vesicle;2.84329815387076e-05!GO:0016564;transcription repressor activity;2.93441583177348e-05!GO:0000074;regulation of progression through cell cycle;3.11605688846182e-05!GO:0032561;guanyl ribonucleotide binding;3.11674010859502e-05!GO:0019001;guanyl nucleotide binding;3.11674010859502e-05!GO:0033116;ER-Golgi intermediate compartment membrane;3.11674010859502e-05!GO:0005643;nuclear pore;3.64436303414292e-05!GO:0046474;glycerophospholipid biosynthetic process;3.86006284732864e-05!GO:0016567;protein ubiquitination;3.96349666028976e-05!GO:0031252;leading edge;4.26800048490376e-05!GO:0030867;rough endoplasmic reticulum membrane;4.85636618600008e-05!GO:0005769;early endosome;6.71384359281238e-05!GO:0016740;transferase activity;7.64358145966796e-05!GO:0008361;regulation of cell size;7.76099213612554e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.61416014696091e-05!GO:0051170;nuclear import;9.11106025395993e-05!GO:0005048;signal sequence binding;9.36650113090913e-05!GO:0005762;mitochondrial large ribosomal subunit;0.000101138634288907!GO:0000315;organellar large ribosomal subunit;0.000101138634288907!GO:0008610;lipid biosynthetic process;0.000104874737473818!GO:0004576;oligosaccharyl transferase activity;0.000110846331381598!GO:0015980;energy derivation by oxidation of organic compounds;0.000113223479949172!GO:0005905;coated pit;0.000118370993862955!GO:0016049;cell growth;0.000122448322439643!GO:0006612;protein targeting to membrane;0.000127673932656076!GO:0000151;ubiquitin ligase complex;0.000129317375052785!GO:0006606;protein import into nucleus;0.000133460562787557!GO:0050794;regulation of cellular process;0.000142427804332399!GO:0043021;ribonucleoprotein binding;0.000145596705135175!GO:0043566;structure-specific DNA binding;0.000149369518423917!GO:0016126;sterol biosynthetic process;0.000153783155103534!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000154282487298306!GO:0000314;organellar small ribosomal subunit;0.00015531180131378!GO:0005763;mitochondrial small ribosomal subunit;0.00015531180131378!GO:0046930;pore complex;0.000155695477388531!GO:0005741;mitochondrial outer membrane;0.000158344510634089!GO:0031324;negative regulation of cellular metabolic process;0.000158344510634089!GO:0046467;membrane lipid biosynthetic process;0.000163617047627195!GO:0006281;DNA repair;0.000173781521866885!GO:0001558;regulation of cell growth;0.000202112175323646!GO:0009719;response to endogenous stimulus;0.000204585032576917!GO:0008250;oligosaccharyl transferase complex;0.000215365491224426!GO:0046489;phosphoinositide biosynthetic process;0.000230080512692769!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00023565008453986!GO:0005667;transcription factor complex;0.000252969378926636!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000271943091225733!GO:0015399;primary active transmembrane transporter activity;0.000271943091225733!GO:0006793;phosphorus metabolic process;0.000287562685510708!GO:0006796;phosphate metabolic process;0.000287562685510708!GO:0007243;protein kinase cascade;0.000297369374121696!GO:0018196;peptidyl-asparagine modification;0.000346577051438321!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000346577051438321!GO:0003724;RNA helicase activity;0.000356357803202297!GO:0006650;glycerophospholipid metabolic process;0.000369983707471164!GO:0003697;single-stranded DNA binding;0.000385842351190014!GO:0030133;transport vesicle;0.000396693530941434!GO:0009165;nucleotide biosynthetic process;0.000410187506056816!GO:0022890;inorganic cation transmembrane transporter activity;0.000412555321953442!GO:0030176;integral to endoplasmic reticulum membrane;0.000462194999063344!GO:0009892;negative regulation of metabolic process;0.00055105496590928!GO:0005885;Arp2/3 protein complex;0.00058900111846491!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000598497919292272!GO:0005774;vacuolar membrane;0.000630171537943965!GO:0044262;cellular carbohydrate metabolic process;0.000647154366682242!GO:0030663;COPI coated vesicle membrane;0.000655889717183354!GO:0030126;COPI vesicle coat;0.000655889717183354!GO:0043623;cellular protein complex assembly;0.000655889717183354!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000684890858146962!GO:0005791;rough endoplasmic reticulum;0.000684890858146962!GO:0050657;nucleic acid transport;0.000684890858146962!GO:0051236;establishment of RNA localization;0.000684890858146962!GO:0050658;RNA transport;0.000684890858146962!GO:0006403;RNA localization;0.000707386082927852!GO:0003713;transcription coactivator activity;0.000712454999454564!GO:0006626;protein targeting to mitochondrion;0.000741777385430667!GO:0016310;phosphorylation;0.000753603654061903!GO:0015992;proton transport;0.000761800037353297!GO:0006818;hydrogen transport;0.00076910241708684!GO:0016779;nucleotidyltransferase activity;0.000796045195965354!GO:0043681;protein import into mitochondrion;0.000798623360469957!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000827101800796305!GO:0051920;peroxiredoxin activity;0.000827289746752901!GO:0031072;heat shock protein binding;0.000833362186259341!GO:0007040;lysosome organization and biogenesis;0.000931798011552937!GO:0019752;carboxylic acid metabolic process;0.000985571826089002!GO:0006082;organic acid metabolic process;0.00100625366913402!GO:0016568;chromatin modification;0.00107161912449762!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00109983799275179!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00117740940903404!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00120432431952015!GO:0006979;response to oxidative stress;0.00120432431952015!GO:0022402;cell cycle process;0.00138488636186379!GO:0006497;protein amino acid lipidation;0.00146585719197479!GO:0048522;positive regulation of cellular process;0.00149827648449136!GO:0004177;aminopeptidase activity;0.00152255314970202!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00160225578029745!GO:0030433;ER-associated protein catabolic process;0.00162201324922976!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.00162201324922976!GO:0006839;mitochondrial transport;0.00173934945769359!GO:0007050;cell cycle arrest;0.0017714280753412!GO:0044437;vacuolar part;0.00187734257488606!GO:0048500;signal recognition particle;0.00193809092592937!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00193809092592937!GO:0030036;actin cytoskeleton organization and biogenesis;0.00206451534635041!GO:0006323;DNA packaging;0.00206874455405959!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0020857928069089!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0020857928069089!GO:0006984;ER-nuclear signaling pathway;0.00209009965349853!GO:0007033;vacuole organization and biogenesis;0.00216370732431669!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00216370732431669!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00216370732431669!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00216370732431669!GO:0006891;intra-Golgi vesicle-mediated transport;0.00220817320229982!GO:0016563;transcription activator activity;0.00223140757383794!GO:0005765;lysosomal membrane;0.00226555324623155!GO:0016197;endosome transport;0.00234049905315972!GO:0030137;COPI-coated vesicle;0.00239248762743031!GO:0003899;DNA-directed RNA polymerase activity;0.00244053096471279!GO:0006695;cholesterol biosynthetic process;0.00257225813838295!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00274561412584625!GO:0008632;apoptotic program;0.0028425724820823!GO:0046483;heterocycle metabolic process;0.0029092237226431!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00293229151049077!GO:0043492;ATPase activity, coupled to movement of substances;0.00298241350816514!GO:0051427;hormone receptor binding;0.00301353202907706!GO:0016044;membrane organization and biogenesis;0.00320572969017134!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00320572969017134!GO:0015002;heme-copper terminal oxidase activity;0.00320572969017134!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00320572969017134!GO:0004129;cytochrome-c oxidase activity;0.00320572969017134!GO:0006506;GPI anchor biosynthetic process;0.00334830556898123!GO:0030132;clathrin coat of coated pit;0.00343167654692142!GO:0006643;membrane lipid metabolic process;0.00344923931729931!GO:0048471;perinuclear region of cytoplasm;0.00345568708150876!GO:0006509;membrane protein ectodomain proteolysis;0.00347354773397904!GO:0033619;membrane protein proteolysis;0.00347354773397904!GO:0007006;mitochondrial membrane organization and biogenesis;0.00358840996193651!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00362360399722387!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00362360399722387!GO:0050662;coenzyme binding;0.00362360399722387!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00362819269473923!GO:0007034;vacuolar transport;0.00383466669863762!GO:0042158;lipoprotein biosynthetic process;0.0038583162986664!GO:0051087;chaperone binding;0.00392888725771059!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00394288870214793!GO:0045047;protein targeting to ER;0.00394288870214793!GO:0030384;phosphoinositide metabolic process;0.00416674934342271!GO:0019899;enzyme binding;0.00428549646955934!GO:0006749;glutathione metabolic process;0.00439224909815953!GO:0006505;GPI anchor metabolic process;0.00439224909815953!GO:0031902;late endosome membrane;0.00454087546505103!GO:0006118;electron transport;0.00460521006465874!GO:0030658;transport vesicle membrane;0.00462358968259804!GO:0000096;sulfur amino acid metabolic process;0.00463985395916631!GO:0006383;transcription from RNA polymerase III promoter;0.0047711319355107!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00477367202980295!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00477367202980295!GO:0040008;regulation of growth;0.00478027857171128!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00486565231321265!GO:0006790;sulfur metabolic process;0.00511278532144531!GO:0001872;zymosan binding;0.00511805717820414!GO:0001878;response to yeast;0.00511805717820414!GO:0035257;nuclear hormone receptor binding;0.00515123248093294!GO:0006950;response to stress;0.00562472225826909!GO:0065009;regulation of a molecular function;0.00564033776365741!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.005807406406092!GO:0006414;translational elongation;0.0058394861249999!GO:0051287;NAD binding;0.0058394861249999!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00586836527877035!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00601758017602806!GO:0051028;mRNA transport;0.00604670023716669!GO:0046519;sphingoid metabolic process;0.00604670023716669!GO:0051252;regulation of RNA metabolic process;0.00604933481859229!GO:0009967;positive regulation of signal transduction;0.00623460569100715!GO:0030134;ER to Golgi transport vesicle;0.00637643788064079!GO:0008312;7S RNA binding;0.00662837825274954!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00664634717347851!GO:0048487;beta-tubulin binding;0.00673463257321286!GO:0043284;biopolymer biosynthetic process;0.00696180499983816!GO:0043488;regulation of mRNA stability;0.00697099531352059!GO:0043487;regulation of RNA stability;0.00697099531352059!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00711647887169344!GO:0008033;tRNA processing;0.00713747140193525!GO:0007264;small GTPase mediated signal transduction;0.00721959121373563!GO:0043433;negative regulation of transcription factor activity;0.00728938953385273!GO:0003729;mRNA binding;0.00728938953385273!GO:0003756;protein disulfide isomerase activity;0.0073115791164783!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0073115791164783!GO:0008139;nuclear localization sequence binding;0.00739333524395899!GO:0045045;secretory pathway;0.00741378293785846!GO:0005813;centrosome;0.00776341314935441!GO:0016481;negative regulation of transcription;0.00801151633857198!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00837060592178143!GO:0050789;regulation of biological process;0.00852806862103846!GO:0030041;actin filament polymerization;0.00853508597877851!GO:0008186;RNA-dependent ATPase activity;0.00875176924558194!GO:0030029;actin filament-based process;0.0087528745471559!GO:0000049;tRNA binding;0.0087561380020322!GO:0008637;apoptotic mitochondrial changes;0.0089381179384897!GO:0003746;translation elongation factor activity;0.0091338034335275!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0091338034335275!GO:0030127;COPII vesicle coat;0.00919343313520685!GO:0012507;ER to Golgi transport vesicle membrane;0.00919343313520685!GO:0030968;unfolded protein response;0.00921366225959413!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00921515363080027!GO:0008180;signalosome;0.00927387759501854!GO:0006595;polyamine metabolic process;0.00929665696182053!GO:0033673;negative regulation of kinase activity;0.00936633521754655!GO:0006469;negative regulation of protein kinase activity;0.00936633521754655!GO:0031901;early endosome membrane;0.00938500140899162!GO:0050811;GABA receptor binding;0.00990281596809417!GO:0003690;double-stranded DNA binding;0.00993278745812599!GO:0030880;RNA polymerase complex;0.0100311946034047!GO:0042802;identical protein binding;0.0102684722818135!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0102684722818135!GO:0030659;cytoplasmic vesicle membrane;0.0109032924409455!GO:0043022;ribosome binding;0.0110481699697685!GO:0016272;prefoldin complex;0.0111233146859969!GO:0030503;regulation of cell redox homeostasis;0.0111542394430778!GO:0031418;L-ascorbic acid binding;0.0111542394430778!GO:0017166;vinculin binding;0.0112157055649919!GO:0030660;Golgi-associated vesicle membrane;0.0116491845897762!GO:0008652;amino acid biosynthetic process;0.0121626405827252!GO:0006644;phospholipid metabolic process;0.0121646472557987!GO:0051348;negative regulation of transferase activity;0.0122053313487791!GO:0006740;NADPH regeneration;0.0125028964020874!GO:0006098;pentose-phosphate shunt;0.0125028964020874!GO:0005869;dynactin complex;0.0126263692260627!GO:0006672;ceramide metabolic process;0.0126263692260627!GO:0006778;porphyrin metabolic process;0.012676332553954!GO:0033013;tetrapyrrole metabolic process;0.012676332553954!GO:0005815;microtubule organizing center;0.0130410109226634!GO:0048037;cofactor binding;0.0140257119808164!GO:0030118;clathrin coat;0.014043048776209!GO:0007041;lysosomal transport;0.0141341977655922!GO:0008234;cysteine-type peptidase activity;0.0156182271917022!GO:0044255;cellular lipid metabolic process;0.0161184462409719!GO:0001726;ruffle;0.0167295548872364!GO:0033559;unsaturated fatty acid metabolic process;0.0168023683820805!GO:0006636;unsaturated fatty acid biosynthetic process;0.0168023683820805!GO:0006260;DNA replication;0.0170767488456428!GO:0051270;regulation of cell motility;0.0175542115878759!GO:0065004;protein-DNA complex assembly;0.0183532336365197!GO:0000030;mannosyltransferase activity;0.0184208866119507!GO:0051276;chromosome organization and biogenesis;0.0185757515792624!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0188675764335824!GO:0006520;amino acid metabolic process;0.0188815297556005!GO:0016408;C-acyltransferase activity;0.0190018918408934!GO:0004004;ATP-dependent RNA helicase activity;0.0190892669165329!GO:0006767;water-soluble vitamin metabolic process;0.019090482818193!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0194865307024201!GO:0000428;DNA-directed RNA polymerase complex;0.0194865307024201!GO:0044433;cytoplasmic vesicle part;0.0197011179227977!GO:0008047;enzyme activator activity;0.0197339151659014!GO:0016860;intramolecular oxidoreductase activity;0.019910804697434!GO:0048144;fibroblast proliferation;0.0200234604081104!GO:0048145;regulation of fibroblast proliferation;0.0200234604081104!GO:0051128;regulation of cellular component organization and biogenesis;0.0200473362999546!GO:0008154;actin polymerization and/or depolymerization;0.0201103690470104!GO:0006467;protein thiol-disulfide exchange;0.020115480991766!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0202715168544255!GO:0030145;manganese ion binding;0.0203148406287362!GO:0005684;U2-dependent spliceosome;0.0205061709292612!GO:0030125;clathrin vesicle coat;0.0207412899435239!GO:0030665;clathrin coated vesicle membrane;0.0207412899435239!GO:0048518;positive regulation of biological process;0.0211220611978363!GO:0051059;NF-kappaB binding;0.0212530387239723!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0215729382218946!GO:0030027;lamellipodium;0.0219216117917075!GO:0005832;chaperonin-containing T-complex;0.0228293887409187!GO:0051168;nuclear export;0.0228728112495579!GO:0006402;mRNA catabolic process;0.0228728112495579!GO:0045792;negative regulation of cell size;0.0233686306778356!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.023480926862304!GO:0016363;nuclear matrix;0.0235891586760298!GO:0042168;heme metabolic process;0.0235891586760298!GO:0031625;ubiquitin protein ligase binding;0.0244416479598016!GO:0015631;tubulin binding;0.0247475830551634!GO:0044452;nucleolar part;0.0248009477031786!GO:0030833;regulation of actin filament polymerization;0.0249139529069127!GO:0000209;protein polyubiquitination;0.0250609016628366!GO:0007021;tubulin folding;0.0250609016628366!GO:0031543;peptidyl-proline dioxygenase activity;0.0252857662461815!GO:0006289;nucleotide-excision repair;0.0253932557996348!GO:0019798;procollagen-proline dioxygenase activity;0.0255571589119301!GO:0000059;protein import into nucleus, docking;0.0259407379332661!GO:0048146;positive regulation of fibroblast proliferation;0.0261809241321148!GO:0032940;secretion by cell;0.0264608439323164!GO:0006333;chromatin assembly or disassembly;0.0266538889672186!GO:0030308;negative regulation of cell growth;0.0267111882486677!GO:0022408;negative regulation of cell-cell adhesion;0.0268027710006424!GO:0048468;cell development;0.0268712822198291!GO:0035035;histone acetyltransferase binding;0.0268718826369773!GO:0006417;regulation of translation;0.0269899363985942!GO:0005862;muscle thin filament tropomyosin;0.0271067514669232!GO:0051101;regulation of DNA binding;0.0272813057696981!GO:0006914;autophagy;0.0284337700750247!GO:0003711;transcription elongation regulator activity;0.0288573485501419!GO:0031529;ruffle organization and biogenesis;0.0288573485501419!GO:0016125;sterol metabolic process;0.0294739362087273!GO:0015630;microtubule cytoskeleton;0.0294739362087273!GO:0006739;NADP metabolic process;0.0296108958704158!GO:0000339;RNA cap binding;0.0298628561276866!GO:0006354;RNA elongation;0.0302522212798686!GO:0012506;vesicle membrane;0.0304388162326784!GO:0035258;steroid hormone receptor binding;0.0304996047801812!GO:0030119;AP-type membrane coat adaptor complex;0.0317272211646724!GO:0007030;Golgi organization and biogenesis;0.032611225571195!GO:0006769;nicotinamide metabolic process;0.0327972918757958!GO:0030508;thiol-disulfide exchange intermediate activity;0.0333743012677425!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0334525078028257!GO:0032984;macromolecular complex disassembly;0.0334525078028257!GO:0015923;mannosidase activity;0.0336732419298491!GO:0006007;glucose catabolic process;0.0342457130002164!GO:0004287;prolyl oligopeptidase activity;0.0343299481790612!GO:0000097;sulfur amino acid biosynthetic process;0.0350287422157622!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0357612609321817!GO:0030521;androgen receptor signaling pathway;0.0362981991766478!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0364741226302389!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0364741226302389!GO:0051540;metal cluster binding;0.0366959515548044!GO:0051536;iron-sulfur cluster binding;0.0366959515548044!GO:0004228;gelatinase A activity;0.0374737035457038!GO:0001955;blood vessel maturation;0.0374737035457038!GO:0006518;peptide metabolic process;0.0378415347194524!GO:0008147;structural constituent of bone;0.0382155873432174!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0385253833455844!GO:0008320;protein transmembrane transporter activity;0.0385937436441779!GO:0051539;4 iron, 4 sulfur cluster binding;0.0387488769438489!GO:0001953;negative regulation of cell-matrix adhesion;0.0390406107642997!GO:0051881;regulation of mitochondrial membrane potential;0.0390406107642997!GO:0006779;porphyrin biosynthetic process;0.039585481561237!GO:0033014;tetrapyrrole biosynthetic process;0.039585481561237!GO:0006458;'de novo' protein folding;0.0402863030478198!GO:0051084;'de novo' posttranslational protein folding;0.0402863030478198!GO:0005801;cis-Golgi network;0.0402863030478198!GO:0022406;membrane docking;0.0402863030478198!GO:0048278;vesicle docking;0.0402863030478198!GO:0016251;general RNA polymerase II transcription factor activity;0.0405319066494397!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0406106805505336!GO:0032507;maintenance of cellular protein localization;0.0412492029697078!GO:0008538;proteasome activator activity;0.0420818034652341!GO:0019511;peptidyl-proline hydroxylation;0.0420818034652341!GO:0018208;peptidyl-proline modification;0.0420818034652341!GO:0019471;4-hydroxyproline metabolic process;0.0420818034652341!GO:0018401;peptidyl-proline hydroxylation to 4-hydroxy-L-proline;0.0420818034652341!GO:0009112;nucleobase metabolic process;0.0423392245336765!GO:0001527;microfibril;0.0423514294845747!GO:0006892;post-Golgi vesicle-mediated transport;0.0423514294845747!GO:0006807;nitrogen compound metabolic process;0.0432033636431466!GO:0045936;negative regulation of phosphate metabolic process;0.0432091087837116!GO:0001952;regulation of cell-matrix adhesion;0.0433540342834866!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0433540342834866!GO:0005669;transcription factor TFIID complex;0.0437285128029788!GO:0006904;vesicle docking during exocytosis;0.0437776822029705!GO:0006693;prostaglandin metabolic process;0.0466193952617405!GO:0006692;prostanoid metabolic process;0.0466193952617405!GO:0040011;locomotion;0.0470495390438351!GO:0051235;maintenance of localization;0.0470495390438351!GO:0030911;TPR domain binding;0.0471262559035605!GO:0008168;methyltransferase activity;0.0471262559035605!GO:0022884;macromolecule transmembrane transporter activity;0.0471262559035605!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0471262559035605!GO:0015036;disulfide oxidoreductase activity;0.04774230084409!GO:0030032;lamellipodium biogenesis;0.0485490213049401!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0488349998024153!GO:0016615;malate dehydrogenase activity;0.0493693416896978!GO:0005784;translocon complex;0.0493693416896978!GO:0031371;ubiquitin conjugating enzyme complex;0.0495202303242149!GO:0022411;cellular component disassembly;0.0495202303242149!GO:0008243;plasminogen activator activity;0.0495202303242149!GO:0031272;regulation of pseudopodium formation;0.0495202303242149!GO:0031269;pseudopodium formation;0.0495202303242149!GO:0031344;regulation of cell projection organization and biogenesis;0.0495202303242149!GO:0031268;pseudopodium organization and biogenesis;0.0495202303242149!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0495202303242149!GO:0031274;positive regulation of pseudopodium formation;0.0495202303242149!GO:0051098;regulation of binding;0.0496963322703759!GO:0009116;nucleoside metabolic process;0.0499071448877641 | |||
|sample_id=11752 | |sample_id=11752 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=heart | |sample_tissue=heart | ||
|top_motifs=NKX3-1:2.2371932277;XBP1:2.06143352007;HIF1A:1.81703629484;bHLH_family:1.7558351343;ALX4:1.75477194829;HSF1,2:1.3893086788;MAFB:1.30298949596;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.25568075011;ATF6:1.23363048148;TP53:1.19296830589;PAX1,9:1.11432470392;HOX{A5,B5}:1.10249756752;HLF:1.10110945074;EBF1:1.05741249054;AIRE:1.0290631758;NANOG{mouse}:1.01909357;SREBF1,2:1.00693230253;RXR{A,B,G}:1.00543966912;EN1,2:1.00209521458;TAL1_TCF{3,4,12}:0.986835739171;NFE2L2:0.96939828799;IKZF1:0.944081959895;HES1:0.912925813795;UFEwm:0.89099948531;HOX{A4,D4}:0.890771711779;ESR1:0.889542891017;NFE2L1:0.8874385209;ZNF238:0.86560113151;CEBPA,B_DDIT3:0.860383836885;NFATC1..3:0.768394001065;TLX2:0.708699160195;NFE2:0.702872471706;NFIX:0.660290195708;HMX1:0.657297085571;ELK1,4_GABP{A,B1}:0.627503534821;NKX2-1,4:0.593818417516;MYBL2:0.590990887219;TEAD1:0.590161558946;BACH2:0.574224386809;RXRA_VDR{dimer}:0.569452289588;PAX4:0.566587972808;NR3C1:0.558955263144;STAT2,4,6:0.541358511785;PAX2:0.537796382807;FOS_FOS{B,L1}_JUN{B,D}:0.523186523393;TFCP2:0.507413857115;HMGA1,2:0.501906412858;TEF:0.479234527636;ZBTB6:0.4770942655;FOXO1,3,4:0.468302025645;LHX3,4:0.446495046327;FOXP3:0.4445541095;EVI1:0.430075599283;CRX:0.428761628224;TBX4,5:0.427793303481;TLX1..3_NFIC{dimer}:0.388245487244;PPARG:0.380745649704;RFX1:0.346871165954;GZF1:0.34648573887;FOSL2:0.34508843111;AHR_ARNT_ARNT2:0.311066576778;GTF2A1,2:0.309872861676;TFAP4:0.305759957792;NFKB1_REL_RELA:0.294202003937;TFAP2B:0.272784863729;TBP:0.270879997883;ATF2:0.244304107996;NKX2-2,8:0.230511747141;ALX1:0.223148914995;ATF4:0.171683244498;STAT1,3:0.171031812606;GFI1B:0.16415961843;PRDM1:0.159314598113;KLF4:0.144414907977;SRF:0.108386129112;CREB1:0.106915295865;ATF5_CREB3:0.0891257396281;ARID5B:0.0876077017445;IRF1,2:0.0857193939276;GLI1..3:0.0779740406225;POU3F1..4:0.0775099425769;GTF2I:0.0762478027611;PATZ1:0.0755141258848;BPTF:0.0674120714147;ESRRA:0.0605993490201;REST:0.0485249128466;NFIL3:0.0376175786717;AR:0.0172641071918;MYFfamily:0.00197526545094;SP1:-0.0100925018676;POU1F1:-0.0135583111797;ZNF143:-0.0314548206981;NHLH1,2:-0.0362232586318;MAZ:-0.03639402393;SMAD1..7,9:-0.0540197801984;SOX17:-0.0561612136628;NR6A1:-0.0632533236153;MEF2{A,B,C,D}:-0.0738436997357;HNF1A:-0.0840166489986;ZNF148:-0.088689025021;FOX{I1,J2}:-0.0912409281225;PAX6:-0.0944453231189;ZBTB16:-0.0951574794009;RUNX1..3:-0.100072848115;HAND1,2:-0.121811286405;JUN:-0.138773844451;ZNF423:-0.140650822732;SPZ1:-0.145451322811;STAT5{A,B}:-0.146652557986;NKX3-2:-0.149610073855;ADNP_IRX_SIX_ZHX:-0.152536082954;PAX8:-0.170755711953;IRF7:-0.17817678637;FOX{D1,D2}:-0.18106853094;NRF1:-0.182433480745;LMO2:-0.182461439513;PAX5:-0.187814845164;HIC1:-0.192807879894;ONECUT1,2:-0.198187433458;FOXL1:-0.19896974674;MZF1:-0.204793312723;CDC5L:-0.211098751831;YY1:-0.212747638558;GATA4:-0.219731632264;MTF1:-0.229360631292;ZIC1..3:-0.23028940009;ELF1,2,4:-0.242624830121;ZFP161:-0.24683064494;FOXN1:-0.251259490441;GCM1,2:-0.272834306681;HNF4A_NR2F1,2:-0.298291207068;PRRX1,2:-0.303196663019;HOXA9_MEIS1:-0.308667886776;TFAP2{A,C}:-0.348524720887;POU6F1:-0.362285598664;GFI1:-0.371163713974;PBX1:-0.37250726696;MTE{core}:-0.39506021193;PAX3,7:-0.395517658128;SPI1:-0.412399690105;EGR1..3:-0.425728931016;MYOD1:-0.434071071948;SOX2:-0.435581047152;RORA:-0.45824734959;DMAP1_NCOR{1,2}_SMARC:-0.476439989434;RREB1:-0.478871730567;FOXQ1:-0.481512470794;ETS1,2:-0.482779845527;LEF1_TCF7_TCF7L1,2:-0.495224449309;XCPE1{core}:-0.505990779425;RFX2..5_RFXANK_RFXAP:-0.512514502726;SPIB:-0.536609032548;EP300:-0.56829973469;MED-1{core}:-0.591495689256;CDX1,2,4:-0.612094104178;GATA6:-0.623324011993;HOX{A6,A7,B6,B7}:-0.623994420069;HBP1_HMGB_SSRP1_UBTF:-0.655686404105;TFDP1:-0.672346892572;ZNF384:-0.69306750674;NFY{A,B,C}:-0.708402489125;ZEB1:-0.712926135023;SNAI1..3:-0.714172533151;DBP:-0.722289283992;NKX6-1,2:-0.735081445791;NR1H4:-0.753013376157;TGIF1:-0.753546065602;SOX5:-0.787902200628;MYB:-0.796491541584;FOXA2:-0.812842526042;CUX2:-0.815511552266;NR5A1,2:-0.869108686705;PDX1:-0.885824353477;RBPJ:-0.88853425784;SOX{8,9,10}:-0.894137261481;FOXD3:-0.941397427158;POU5F1:-0.98111499848;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.998295133665;FOX{F1,F2,J1}:-1.02479232932;FOXP1:-1.07647636039;FOXM1:-1.12510863483;BREu{core}:-1.13807672592;VSX1,2:-1.17143269329;TOPORS:-1.17910902526;OCT4_SOX2{dimer}:-1.19763298491;NANOG:-1.25194172945;T:-1.30536728049;E2F1..5:-1.31933769871;IKZF2:-1.32815673904;NKX2-3_NKX2-5:-1.43951752596;POU2F1..3:-1.63971248385;PITX1..3:-1.71694850992 | |top_motifs=NKX3-1:2.2371932277;XBP1:2.06143352007;HIF1A:1.81703629484;bHLH_family:1.7558351343;ALX4:1.75477194829;HSF1,2:1.3893086788;MAFB:1.30298949596;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.25568075011;ATF6:1.23363048148;TP53:1.19296830589;PAX1,9:1.11432470392;HOX{A5,B5}:1.10249756752;HLF:1.10110945074;EBF1:1.05741249054;AIRE:1.0290631758;NANOG{mouse}:1.01909357;SREBF1,2:1.00693230253;RXR{A,B,G}:1.00543966912;EN1,2:1.00209521458;TAL1_TCF{3,4,12}:0.986835739171;NFE2L2:0.96939828799;IKZF1:0.944081959895;HES1:0.912925813795;UFEwm:0.89099948531;HOX{A4,D4}:0.890771711779;ESR1:0.889542891017;NFE2L1:0.8874385209;ZNF238:0.86560113151;CEBPA,B_DDIT3:0.860383836885;NFATC1..3:0.768394001065;TLX2:0.708699160195;NFE2:0.702872471706;NFIX:0.660290195708;HMX1:0.657297085571;ELK1,4_GABP{A,B1}:0.627503534821;NKX2-1,4:0.593818417516;MYBL2:0.590990887219;TEAD1:0.590161558946;BACH2:0.574224386809;RXRA_VDR{dimer}:0.569452289588;PAX4:0.566587972808;NR3C1:0.558955263144;STAT2,4,6:0.541358511785;PAX2:0.537796382807;FOS_FOS{B,L1}_JUN{B,D}:0.523186523393;TFCP2:0.507413857115;HMGA1,2:0.501906412858;TEF:0.479234527636;ZBTB6:0.4770942655;FOXO1,3,4:0.468302025645;LHX3,4:0.446495046327;FOXP3:0.4445541095;EVI1:0.430075599283;CRX:0.428761628224;TBX4,5:0.427793303481;TLX1..3_NFIC{dimer}:0.388245487244;PPARG:0.380745649704;RFX1:0.346871165954;GZF1:0.34648573887;FOSL2:0.34508843111;AHR_ARNT_ARNT2:0.311066576778;GTF2A1,2:0.309872861676;TFAP4:0.305759957792;NFKB1_REL_RELA:0.294202003937;TFAP2B:0.272784863729;TBP:0.270879997883;ATF2:0.244304107996;NKX2-2,8:0.230511747141;ALX1:0.223148914995;ATF4:0.171683244498;STAT1,3:0.171031812606;GFI1B:0.16415961843;PRDM1:0.159314598113;KLF4:0.144414907977;SRF:0.108386129112;CREB1:0.106915295865;ATF5_CREB3:0.0891257396281;ARID5B:0.0876077017445;IRF1,2:0.0857193939276;GLI1..3:0.0779740406225;POU3F1..4:0.0775099425769;GTF2I:0.0762478027611;PATZ1:0.0755141258848;BPTF:0.0674120714147;ESRRA:0.0605993490201;REST:0.0485249128466;NFIL3:0.0376175786717;AR:0.0172641071918;MYFfamily:0.00197526545094;SP1:-0.0100925018676;POU1F1:-0.0135583111797;ZNF143:-0.0314548206981;NHLH1,2:-0.0362232586318;MAZ:-0.03639402393;SMAD1..7,9:-0.0540197801984;SOX17:-0.0561612136628;NR6A1:-0.0632533236153;MEF2{A,B,C,D}:-0.0738436997357;HNF1A:-0.0840166489986;ZNF148:-0.088689025021;FOX{I1,J2}:-0.0912409281225;PAX6:-0.0944453231189;ZBTB16:-0.0951574794009;RUNX1..3:-0.100072848115;HAND1,2:-0.121811286405;JUN:-0.138773844451;ZNF423:-0.140650822732;SPZ1:-0.145451322811;STAT5{A,B}:-0.146652557986;NKX3-2:-0.149610073855;ADNP_IRX_SIX_ZHX:-0.152536082954;PAX8:-0.170755711953;IRF7:-0.17817678637;FOX{D1,D2}:-0.18106853094;NRF1:-0.182433480745;LMO2:-0.182461439513;PAX5:-0.187814845164;HIC1:-0.192807879894;ONECUT1,2:-0.198187433458;FOXL1:-0.19896974674;MZF1:-0.204793312723;CDC5L:-0.211098751831;YY1:-0.212747638558;GATA4:-0.219731632264;MTF1:-0.229360631292;ZIC1..3:-0.23028940009;ELF1,2,4:-0.242624830121;ZFP161:-0.24683064494;FOXN1:-0.251259490441;GCM1,2:-0.272834306681;HNF4A_NR2F1,2:-0.298291207068;PRRX1,2:-0.303196663019;HOXA9_MEIS1:-0.308667886776;TFAP2{A,C}:-0.348524720887;POU6F1:-0.362285598664;GFI1:-0.371163713974;PBX1:-0.37250726696;MTE{core}:-0.39506021193;PAX3,7:-0.395517658128;SPI1:-0.412399690105;EGR1..3:-0.425728931016;MYOD1:-0.434071071948;SOX2:-0.435581047152;RORA:-0.45824734959;DMAP1_NCOR{1,2}_SMARC:-0.476439989434;RREB1:-0.478871730567;FOXQ1:-0.481512470794;ETS1,2:-0.482779845527;LEF1_TCF7_TCF7L1,2:-0.495224449309;XCPE1{core}:-0.505990779425;RFX2..5_RFXANK_RFXAP:-0.512514502726;SPIB:-0.536609032548;EP300:-0.56829973469;MED-1{core}:-0.591495689256;CDX1,2,4:-0.612094104178;GATA6:-0.623324011993;HOX{A6,A7,B6,B7}:-0.623994420069;HBP1_HMGB_SSRP1_UBTF:-0.655686404105;TFDP1:-0.672346892572;ZNF384:-0.69306750674;NFY{A,B,C}:-0.708402489125;ZEB1:-0.712926135023;SNAI1..3:-0.714172533151;DBP:-0.722289283992;NKX6-1,2:-0.735081445791;NR1H4:-0.753013376157;TGIF1:-0.753546065602;SOX5:-0.787902200628;MYB:-0.796491541584;FOXA2:-0.812842526042;CUX2:-0.815511552266;NR5A1,2:-0.869108686705;PDX1:-0.885824353477;RBPJ:-0.88853425784;SOX{8,9,10}:-0.894137261481;FOXD3:-0.941397427158;POU5F1:-0.98111499848;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.998295133665;FOX{F1,F2,J1}:-1.02479232932;FOXP1:-1.07647636039;FOXM1:-1.12510863483;BREu{core}:-1.13807672592;VSX1,2:-1.17143269329;TOPORS:-1.17910902526;OCT4_SOX2{dimer}:-1.19763298491;NANOG:-1.25194172945;T:-1.30536728049;E2F1..5:-1.31933769871;IKZF2:-1.32815673904;NKX2-3_NKX2-5:-1.43951752596;POU2F1..3:-1.63971248385;PITX1..3:-1.71694850992 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11752-123G6;search_select_hide=table117:FF:11752-123G6 | |||
}} | }} | ||
Latest revision as of 18:17, 4 June 2020
| Name: | mesenchymal precursor cell - cardiac, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12368 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12368
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12368
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.965 |
| 10 | 10 | 0.335 |
| 100 | 100 | 0.988 |
| 101 | 101 | 0.661 |
| 102 | 102 | 0.585 |
| 103 | 103 | 0.109 |
| 104 | 104 | 0.753 |
| 105 | 105 | 0.66 |
| 106 | 106 | 0.438 |
| 107 | 107 | 0.621 |
| 108 | 108 | 0.174 |
| 109 | 109 | 0.0592 |
| 11 | 11 | 0.474 |
| 110 | 110 | 0.334 |
| 111 | 111 | 0.673 |
| 112 | 112 | 0.105 |
| 113 | 113 | 8.96369e-4 |
| 114 | 114 | 0.374 |
| 115 | 115 | 0.619 |
| 116 | 116 | 0.0515 |
| 117 | 117 | 0.0373 |
| 118 | 118 | 0.713 |
| 119 | 119 | 0.729 |
| 12 | 12 | 0.932 |
| 120 | 120 | 0.11 |
| 121 | 121 | 0.624 |
| 122 | 122 | 0.0811 |
| 123 | 123 | 8.28523e-4 |
| 124 | 124 | 0.0465 |
| 125 | 125 | 0.916 |
| 126 | 126 | 0.903 |
| 127 | 127 | 0.817 |
| 128 | 128 | 0.936 |
| 129 | 129 | 0.214 |
| 13 | 13 | 0.415 |
| 130 | 130 | 0.567 |
| 131 | 131 | 0.133 |
| 132 | 132 | 0.401 |
| 133 | 133 | 0.538 |
| 134 | 134 | 0.569 |
| 135 | 135 | 0.541 |
| 136 | 136 | 0.229 |
| 137 | 137 | 0.749 |
| 138 | 138 | 0.943 |
| 139 | 139 | 0.141 |
| 14 | 14 | 0.446 |
| 140 | 140 | 0.721 |
| 141 | 141 | 0.51 |
| 142 | 142 | 0.749 |
| 143 | 143 | 0.213 |
| 144 | 144 | 0.534 |
| 145 | 145 | 0.976 |
| 146 | 146 | 0.952 |
| 147 | 147 | 0.273 |
| 148 | 148 | 0.909 |
| 149 | 149 | 0.239 |
| 15 | 15 | 0.797 |
| 150 | 150 | 0.17 |
| 151 | 151 | 0.832 |
| 152 | 152 | 0.0271 |
| 153 | 153 | 0.448 |
| 154 | 154 | 0.302 |
| 155 | 155 | 0.00511 |
| 156 | 156 | 0.163 |
| 157 | 157 | 0.943 |
| 158 | 158 | 0.065 |
| 159 | 159 | 0.126 |
| 16 | 16 | 0.0452 |
| 160 | 160 | 0.296 |
| 161 | 161 | 0.333 |
| 162 | 162 | 0.194 |
| 163 | 163 | 0.556 |
| 164 | 164 | 0.00988 |
| 165 | 165 | 0.702 |
| 166 | 166 | 0.357 |
| 167 | 167 | 0.383 |
| 168 | 168 | 0.855 |
| 169 | 169 | 0.119 |
| 17 | 17 | 0.549 |
| 18 | 18 | 0.0228 |
| 19 | 19 | 0.132 |
| 2 | 2 | 0.797 |
| 20 | 20 | 0.326 |
| 21 | 21 | 0.52 |
| 22 | 22 | 0.142 |
| 23 | 23 | 0.24 |
| 24 | 24 | 0.87 |
| 25 | 25 | 0.0579 |
| 26 | 26 | 0.703 |
| 27 | 27 | 0.881 |
| 28 | 28 | 0.841 |
| 29 | 29 | 0.0674 |
| 3 | 3 | 0.696 |
| 30 | 30 | 0.973 |
| 31 | 31 | 0.535 |
| 32 | 32 | 2.40754e-5 |
| 33 | 33 | 0.669 |
| 34 | 34 | 0.646 |
| 35 | 35 | 0.89 |
| 36 | 36 | 0.0483 |
| 37 | 37 | 0.00161 |
| 38 | 38 | 0.24 |
| 39 | 39 | 0.251 |
| 4 | 4 | 0.023 |
| 40 | 40 | 0.407 |
| 41 | 41 | 0.989 |
| 42 | 42 | 0.397 |
| 43 | 43 | 0.669 |
| 44 | 44 | 0.943 |
| 45 | 45 | 0.861 |
| 46 | 46 | 0.837 |
| 47 | 47 | 0.558 |
| 48 | 48 | 0.857 |
| 49 | 49 | 0.118 |
| 5 | 5 | 0.888 |
| 50 | 50 | 0.876 |
| 51 | 51 | 0.611 |
| 52 | 52 | 0.947 |
| 53 | 53 | 0.00918 |
| 54 | 54 | 0.959 |
| 55 | 55 | 0.216 |
| 56 | 56 | 0.658 |
| 57 | 57 | 0.723 |
| 58 | 58 | 0.12 |
| 59 | 59 | 0.427 |
| 6 | 6 | 0.357 |
| 60 | 60 | 0.565 |
| 61 | 61 | 0.677 |
| 62 | 62 | 0.13 |
| 63 | 63 | 0.553 |
| 64 | 64 | 0.886 |
| 65 | 65 | 0.97 |
| 66 | 66 | 0.201 |
| 67 | 67 | 0.319 |
| 68 | 68 | 0.614 |
| 69 | 69 | 0.321 |
| 7 | 7 | 0.141 |
| 70 | 70 | 0.747 |
| 71 | 71 | 0.522 |
| 72 | 72 | 0.685 |
| 73 | 73 | 0.00154 |
| 74 | 74 | 0.0608 |
| 75 | 75 | 0.21 |
| 76 | 76 | 0.345 |
| 77 | 77 | 0.0109 |
| 78 | 78 | 0.018 |
| 79 | 79 | 0.509 |
| 8 | 8 | 0.517 |
| 80 | 80 | 0.663 |
| 81 | 81 | 0.8 |
| 82 | 82 | 0.958 |
| 83 | 83 | 0.758 |
| 84 | 84 | 0.857 |
| 85 | 85 | 0.159 |
| 86 | 86 | 0.19 |
| 87 | 87 | 0.00288 |
| 88 | 88 | 0.626 |
| 89 | 89 | 0.176 |
| 9 | 9 | 0.689 |
| 90 | 90 | 0.933 |
| 91 | 91 | 0.491 |
| 92 | 92 | 0.156 |
| 93 | 93 | 0.799 |
| 94 | 94 | 0.504 |
| 95 | 95 | 0.011 |
| 96 | 96 | 0.468 |
| 97 | 97 | 0.164 |
| 98 | 98 | 0.125 |
| 99 | 99 | 0.695 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12368
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000271 human cardiac mesenchymal precursor cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0002494 (cardiocyte)
0000034 (stem cell)
0000569 (cardiac mesenchymal cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002384 (connective tissue)
0000479 (tissue)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000271 (human cardiac mesenchymal precursor cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000134 (mesenchymal cell)
CL:0000011 (migratory trunk neural crest cell)
CL:0000221 (ectodermal cell)
