FF:11690-122I7: Difference between revisions

Latest revision as of 18:15, 4 June 2020

Name:	Lens Epithelial Cells, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs12572
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	eye
dev stage	NA
sex	NA
age	NA
cell type	lens epithelial cell
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	6756
catalog number	SC6555
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004687

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12572		CAGE		DRX008321		DRR009193

Accession ID Hg19

Library id		BAM		CTSS
CNhs12572		DRZ000618		DRZ002003

Accession ID Hg38

Library id		BAM		CTSS
CNhs12572		DRZ011968		DRZ013353

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.219
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.209
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0752
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.563
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.074
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.14
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.361
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.583
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0482
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0466
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.419
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.392
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0482
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0482
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.131
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0916
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.228
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.382
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.313
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.644
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12572

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.262
MA0003.1	MA0003.1	0.466
MA0004.1	MA0004.1	0.109
MA0006.1	MA0006.1	0.277
MA0007.1	MA0007.1	0.403
MA0009.1	MA0009.1	0.0642
MA0014.1	MA0014.1	0.0355
MA0017.1	MA0017.1	0.0566
MA0018.2	MA0018.2	0.0409
MA0019.1	MA0019.1	0.349
MA0024.1	MA0024.1	0.0558
MA0025.1	MA0025.1	0.477
MA0027.1	MA0027.1	0.796
MA0028.1	MA0028.1	0.502
MA0029.1	MA0029.1	0.707
MA0030.1	MA0030.1	0.98
MA0031.1	MA0031.1	0.511
MA0035.2	MA0035.2	0.964
MA0038.1	MA0038.1	0.265
MA0039.2	MA0039.2	0.526
MA0040.1	MA0040.1	0.545
MA0041.1	MA0041.1	0.366
MA0042.1	MA0042.1	0.553
MA0043.1	MA0043.1	0.182
MA0046.1	MA0046.1	0.374
MA0047.2	MA0047.2	0.637
MA0048.1	MA0048.1	0.73
MA0050.1	MA0050.1	0.00605
MA0051.1	MA0051.1	0.816
MA0052.1	MA0052.1	0.098
MA0055.1	MA0055.1	0.0597
MA0057.1	MA0057.1	0.853
MA0058.1	MA0058.1	0.0508
MA0059.1	MA0059.1	0.032
MA0060.1	MA0060.1	0.23
MA0061.1	MA0061.1	0.0317
MA0062.2	MA0062.2	0.0315
MA0065.2	MA0065.2	0.00106
MA0066.1	MA0066.1	0.196
MA0067.1	MA0067.1	0.0216
MA0068.1	MA0068.1	0.0537
MA0069.1	MA0069.1	0.956
MA0070.1	MA0070.1	0.82
MA0071.1	MA0071.1	0.131
MA0072.1	MA0072.1	0.902
MA0073.1	MA0073.1	0.776
MA0074.1	MA0074.1	0.134
MA0076.1	MA0076.1	0.595
MA0077.1	MA0077.1	0.482
MA0078.1	MA0078.1	0.422
MA0079.2	MA0079.2	0.613
MA0080.2	MA0080.2	7.40192e-6
MA0081.1	MA0081.1	0.218
MA0083.1	MA0083.1	7.8835e-5
MA0084.1	MA0084.1	0.897
MA0087.1	MA0087.1	0.766
MA0088.1	MA0088.1	0.0497
MA0090.1	MA0090.1	2.98753e-4
MA0091.1	MA0091.1	0.967
MA0092.1	MA0092.1	0.905
MA0093.1	MA0093.1	0.148
MA0099.2	MA0099.2	0.745
MA0100.1	MA0100.1	0.994
MA0101.1	MA0101.1	0.536
MA0102.2	MA0102.2	0.0765
MA0103.1	MA0103.1	0.0243
MA0104.2	MA0104.2	0.0115
MA0105.1	MA0105.1	3.59916e-4
MA0106.1	MA0106.1	0.442
MA0107.1	MA0107.1	0.285
MA0108.2	MA0108.2	4.86122e-5
MA0111.1	MA0111.1	0.272
MA0112.2	MA0112.2	3.95966e-4
MA0113.1	MA0113.1	0.692
MA0114.1	MA0114.1	0.0243
MA0115.1	MA0115.1	0.0381
MA0116.1	MA0116.1	2.17276e-4
MA0117.1	MA0117.1	0.529
MA0119.1	MA0119.1	0.236
MA0122.1	MA0122.1	0.479
MA0124.1	MA0124.1	0.483
MA0125.1	MA0125.1	0.997
MA0131.1	MA0131.1	0.645
MA0135.1	MA0135.1	0.266
MA0136.1	MA0136.1	1.31105e-7
MA0137.2	MA0137.2	0.751
MA0138.2	MA0138.2	0.204
MA0139.1	MA0139.1	0.475
MA0140.1	MA0140.1	0.903
MA0141.1	MA0141.1	0.015
MA0142.1	MA0142.1	0.859
MA0143.1	MA0143.1	0.793
MA0144.1	MA0144.1	0.751
MA0145.1	MA0145.1	0.992
MA0146.1	MA0146.1	0.00867
MA0147.1	MA0147.1	0.0162
MA0148.1	MA0148.1	0.598
MA0149.1	MA0149.1	0.06
MA0150.1	MA0150.1	0.168
MA0152.1	MA0152.1	0.247
MA0153.1	MA0153.1	0.166
MA0154.1	MA0154.1	0.0801
MA0155.1	MA0155.1	0.552
MA0156.1	MA0156.1	0.00126
MA0157.1	MA0157.1	0.649
MA0159.1	MA0159.1	0.101
MA0160.1	MA0160.1	0.0104
MA0162.1	MA0162.1	0.368
MA0163.1	MA0163.1	7.85861e-6
MA0164.1	MA0164.1	0.952
MA0258.1	MA0258.1	5.53173e-4
MA0259.1	MA0259.1	0.218

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12572

Novel motif	Logo	P-value
1	1	0.0251
10	10	0.0316
100	100	0.288
101	101	0.574
102	102	0.168
103	103	0.698
104	104	0.809
105	105	0.982
106	106	0.272
107	107	0.901
108	108	0.747
109	109	0.0301
11	11	0.0257
110	110	0.141
111	111	0.00572
112	112	0.0769
113	113	0.0894
114	114	0.135
115	115	0.382
116	116	0.482
117	117	0.0321
118	118	0.0324
119	119	0.206
12	12	0.317
120	120	0.779
121	121	0.915
122	122	0.867
123	123	2.29713e-6
124	124	0.944
125	125	0.149
126	126	0.424
127	127	0.433
128	128	0.474
129	129	0.179
13	13	0.0646
130	130	0.226
131	131	0.395
132	132	0.908
133	133	0.0266
134	134	0.597
135	135	0.403
136	136	0.89
137	137	0.141
138	138	0.561
139	139	0.0971
14	14	0.491
140	140	0.356
141	141	0.0344
142	142	0.913
143	143	0.931
144	144	0.868
145	145	0.189
146	146	0.929
147	147	0.403
148	148	0.0295
149	149	0.55
15	15	0.324
150	150	0.833
151	151	0.301
152	152	0.701
153	153	0.996
154	154	0.923
155	155	6.20634e-4
156	156	0.162
157	157	0.357
158	158	0.00259
159	159	0.403
16	16	0.508
160	160	0.161
161	161	0.245
162	162	0.737
163	163	0.0528
164	164	0.127
165	165	0.564
166	166	0.125
167	167	0.156
168	168	0.904
169	169	0.0176
17	17	0.357
18	18	0.459
19	19	0.403
2	2	0.89
20	20	0.262
21	21	0.0957
22	22	0.364
23	23	0.747
24	24	0.576
25	25	0.279
26	26	0.00874
27	27	0.827
28	28	0.899
29	29	0.0974
3	3	0.124
30	30	0.295
31	31	0.99
32	32	0.349
33	33	0.181
34	34	0.851
35	35	0.226
36	36	0.0277
37	37	0.228
38	38	0.151
39	39	0.589
4	4	0.593
40	40	0.0243
41	41	0.295
42	42	0.38
43	43	0.12
44	44	0.293
45	45	0.778
46	46	0.0596
47	47	0.0419
48	48	0.121
49	49	0.0348
5	5	0.754
50	50	0.791
51	51	0.517
52	52	0.981
53	53	0.209
54	54	0.611
55	55	0.894
56	56	0.614
57	57	0.27
58	58	0.145
59	59	0.403
6	6	0.174
60	60	0.143
61	61	0.162
62	62	0.137
63	63	0.2
64	64	0.114
65	65	0.222
66	66	0.571
67	67	0.973
68	68	0.665
69	69	0.895
7	7	0.242
70	70	0.0393
71	71	0.0382
72	72	0.844
73	73	0.25
74	74	0.192
75	75	0.012
76	76	0.0511
77	77	0.244
78	78	0.301
79	79	0.817
8	8	0.2
80	80	0.17
81	81	0.301
82	82	0.156
83	83	0.58
84	84	0.769
85	85	0.27
86	86	0.593
87	87	0.789
88	88	0.932
89	89	0.639
9	9	0.898
90	90	0.279
91	91	0.962
92	92	0.832
93	93	0.553
94	94	0.188
95	95	0.0403
96	96	0.0784
97	97	0.319
98	98	0.0278
99	99	0.569

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12572

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000085 human lens epithelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000306 (crystallin accumulating cell)
0002222 (vertebrate lens cell)
0002224 (lens epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0010077 (cuboidal epithelium)
0005389 (transparent eye structure)
0000020 (sense organ)
0010371 (ecto-epithelium)
0007625 (pigment epithelium of eye)
0000484 (simple cuboidal epithelium)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000965 (lens of camera-type eye)
0001803 (epithelium of lens)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000085 (human lens epithelial cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0002346,UBERON:0000064,UBERON:0000047,UBERON:0004121,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0001444,UBERON:0000481,UBERON:0000467,UBERON:0001062,UBERON:0000119,UBERON:0000490,UBERON:0010077,UBERON:0005291,UBERON:0005389,UBERON:0000020,UBERON:0007625,UBERON:0000484,UBERON:0001032,UBERON:0005085,UBERON:0002546,UBERON:0001048,UBERON:0006598,UBERON:0002532,UBERON:0000965,UBERON:0001803,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0000924,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0000076,UBERON:0003075,UBERON:0003056,UBERON:0003072,UBERON:0003071,UBERON:0006601,UBERON:0003073,UBERON:0005426,UBERON:0004128,UBERON:0007284
+|DRA_sample_Accession=CAGE@SAMD00004687
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000548,CL:0000012,CL:0000063,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000004,CL:0000255,CL:0000306,CL:0002222,CL:0002224
+|accession_numbers=CAGE;DRX008321;DRR009193;DRZ000618;DRZ002003;DRZ011968;DRZ013353
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0010077,UBERON:0005389,UBERON:0000020,UBERON:0010371,UBERON:0007625,UBERON:0000484,UBERON:0001032,UBERON:0010317,UBERON:0000965,UBERON:0001803,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0010230
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000255,CL:0000306,CL:0002222,CL:0002224
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000085
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002224;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000970;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001801
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg38.nobarcode.ctss.bed.gz
 |id=FF:11690-122I7
-|is_a=EFO:0002091;;FF:0000002;;FF:0000085;;FF:0000210
+|is_a=EFO:0002091;;FF:0000085
+|is_obsolete=
+|library_id=CNhs12572
+|library_id_phase_based=2:CNhs12572
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11690
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11690
 |name=Lens Epithelial Cells, donor3
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs12572,LSID917,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=122
 |rna_catalog_number=SC6555
@@ Line 57: / Line 78: @@
 |rna_weight_ug=10
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=N/A
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.57522296108789e-213!GO:0005737;cytoplasm;4.67245727837567e-192!GO:0043226;organelle;1.9061947696917e-167!GO:0043229;intracellular organelle;3.47342095363635e-167!GO:0043231;intracellular membrane-bound organelle;2.95280416985213e-164!GO:0043227;membrane-bound organelle;6.36051866328844e-164!GO:0044444;cytoplasmic part;4.76665140578515e-137!GO:0044422;organelle part;1.95829159124903e-123!GO:0044446;intracellular organelle part;5.71727597920564e-122!GO:0032991;macromolecular complex;2.35151587725079e-85!GO:0005515;protein binding;1.60185603673563e-84!GO:0030529;ribonucleoprotein complex;1.32313339097972e-75!GO:0044238;primary metabolic process;2.62240462892691e-75!GO:0044237;cellular metabolic process;1.06408521615179e-73!GO:0043170;macromolecule metabolic process;1.25598541610186e-68!GO:0043233;organelle lumen;5.60741668884477e-66!GO:0031974;membrane-enclosed lumen;5.60741668884477e-66!GO:0003723;RNA binding;5.89599105321038e-64!GO:0044428;nuclear part;5.4973313765483e-59!GO:0005739;mitochondrion;2.13012918447333e-54!GO:0005634;nucleus;6.64460380729235e-54!GO:0019538;protein metabolic process;5.02929787261537e-53!GO:0031090;organelle membrane;9.19294110762451e-53!GO:0016043;cellular component organization and biogenesis;3.19471752765823e-52!GO:0044260;cellular macromolecule metabolic process;8.54649880110596e-48!GO:0005840;ribosome;1.71769444983945e-47!GO:0033036;macromolecule localization;1.77337616076777e-47!GO:0044267;cellular protein metabolic process;4.27533312032968e-47!GO:0015031;protein transport;6.76461874289988e-47!GO:0006412;translation;1.5495188646369e-46!GO:0008104;protein localization;2.43105021551528e-44!GO:0045184;establishment of protein localization;3.2000037507864e-44!GO:0009058;biosynthetic process;2.47639729906554e-43!GO:0043234;protein complex;2.81989830442611e-43!GO:0003735;structural constituent of ribosome;5.61550565028919e-42!GO:0009059;macromolecule biosynthetic process;4.98815380107395e-40!GO:0006396;RNA processing;6.42539207733806e-39!GO:0031981;nuclear lumen;3.94207791514365e-38!GO:0044249;cellular biosynthetic process;5.51167738217381e-38!GO:0044429;mitochondrial part;2.51856260863643e-37!GO:0033279;ribosomal subunit;7.95826498094747e-37!GO:0005829;cytosol;1.14611846566449e-36!GO:0046907;intracellular transport;1.70145909068528e-36!GO:0031967;organelle envelope;6.78808377160284e-35!GO:0031975;envelope;1.30027797478176e-34!GO:0043283;biopolymer metabolic process;2.90642729008696e-34!GO:0016071;mRNA metabolic process;2.42684694635787e-32!GO:0010467;gene expression;4.447841298591e-31!GO:0006886;intracellular protein transport;1.51256375245148e-30!GO:0008380;RNA splicing;1.3619018734413e-29!GO:0065003;macromolecular complex assembly;4.89456058725977e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.55087181947614e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.64102040187154e-28!GO:0006996;organelle organization and biogenesis;8.11632666231963e-28!GO:0006397;mRNA processing;1.62511396775341e-27!GO:0022607;cellular component assembly;5.44872510826156e-26!GO:0012505;endomembrane system;3.347354220875e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.78794698607166e-24!GO:0005740;mitochondrial envelope;2.21765872353141e-24!GO:0005783;endoplasmic reticulum;4.26372702088239e-24!GO:0005654;nucleoplasm;4.89720465110133e-24!GO:0051649;establishment of cellular localization;1.99194531745699e-23!GO:0043228;non-membrane-bound organelle;2.26951264683278e-23!GO:0043232;intracellular non-membrane-bound organelle;2.26951264683278e-23!GO:0051641;cellular localization;2.26951264683278e-23!GO:0044445;cytosolic part;3.80876963761706e-23!GO:0031966;mitochondrial membrane;5.59748004623643e-23!GO:0006457;protein folding;1.00616703229386e-22!GO:0019866;organelle inner membrane;1.07943920622867e-22!GO:0005743;mitochondrial inner membrane;1.81999245953285e-21!GO:0005794;Golgi apparatus;2.61592244578283e-21!GO:0005681;spliceosome;1.58430273940483e-20!GO:0044451;nucleoplasm part;3.28917026228478e-20!GO:0006119;oxidative phosphorylation;5.88924857320412e-20!GO:0048770;pigment granule;1.42656130454894e-19!GO:0042470;melanosome;1.42656130454894e-19!GO:0022618;protein-RNA complex assembly;2.70192262211063e-19!GO:0016462;pyrophosphatase activity;2.85170294189373e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.35657650314703e-19!GO:0015935;small ribosomal subunit;3.76098166817581e-19!GO:0044432;endoplasmic reticulum part;4.80014218133762e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;5.6191756658447e-19!GO:0000166;nucleotide binding;8.00462557001114e-19!GO:0017111;nucleoside-triphosphatase activity;1.57015793625983e-18!GO:0015934;large ribosomal subunit;1.59438011383852e-18!GO:0008134;transcription factor binding;1.73053650242524e-17!GO:0044455;mitochondrial membrane part;2.05472001008216e-17!GO:0016874;ligase activity;3.1764669642797e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.5931206635e-16!GO:0006512;ubiquitin cycle;1.65611154558161e-16!GO:0006259;DNA metabolic process;3.04890260974082e-16!GO:0019941;modification-dependent protein catabolic process;3.46183290055448e-16!GO:0043632;modification-dependent macromolecule catabolic process;3.46183290055448e-16!GO:0044257;cellular protein catabolic process;3.88196134418488e-16!GO:0006511;ubiquitin-dependent protein catabolic process;5.00061236445928e-16!GO:0008135;translation factor activity, nucleic acid binding;6.65194831699039e-16!GO:0048193;Golgi vesicle transport;7.00205436652141e-16!GO:0031980;mitochondrial lumen;7.60182656264126e-16!GO:0005759;mitochondrial matrix;7.60182656264126e-16!GO:0051082;unfolded protein binding;8.81687465137112e-16!GO:0016192;vesicle-mediated transport;1.00320046073434e-15!GO:0044265;cellular macromolecule catabolic process;1.26421046578869e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.31224560515536e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.19968437908685e-15!GO:0043412;biopolymer modification;4.66796940786604e-15!GO:0005730;nucleolus;8.9325667423544e-15!GO:0005746;mitochondrial respiratory chain;1.2461582889741e-14!GO:0043285;biopolymer catabolic process;2.42985445823642e-14!GO:0003676;nucleic acid binding;2.60250335758968e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.65577062350713e-14!GO:0006605;protein targeting;4.11436197491008e-14!GO:0006464;protein modification process;4.64027804883767e-14!GO:0030163;protein catabolic process;5.11238477140655e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.80314481087363e-14!GO:0009057;macromolecule catabolic process;2.34330617465182e-13!GO:0003743;translation initiation factor activity;3.30515205165576e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.40389681198035e-13!GO:0003954;NADH dehydrogenase activity;3.40389681198035e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.40389681198035e-13!GO:0032553;ribonucleotide binding;3.86761451553138e-13!GO:0032555;purine ribonucleotide binding;3.86761451553138e-13!GO:0006413;translational initiation;3.94595256127423e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.92594093958905e-13!GO:0005789;endoplasmic reticulum membrane;2.00626517066883e-12!GO:0017076;purine nucleotide binding;2.1677563593154e-12!GO:0051186;cofactor metabolic process;2.4244602284337e-12!GO:0005793;ER-Golgi intermediate compartment;3.16399196626219e-12!GO:0005761;mitochondrial ribosome;6.81643827561823e-12!GO:0000313;organellar ribosome;6.81643827561823e-12!GO:0044248;cellular catabolic process;1.02760860409758e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.33992465906141e-11!GO:0042773;ATP synthesis coupled electron transport;1.33992465906141e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.88407966050543e-11!GO:0045271;respiratory chain complex I;1.88407966050543e-11!GO:0005747;mitochondrial respiratory chain complex I;1.88407966050543e-11!GO:0003712;transcription cofactor activity;2.25517509099065e-11!GO:0043687;post-translational protein modification;3.03686042147773e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.15194596086159e-11!GO:0005635;nuclear envelope;3.3450718857332e-11!GO:0007049;cell cycle;4.04382364177316e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.86649982101206e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;6.53720681171994e-11!GO:0000375;RNA splicing, via transesterification reactions;6.53720681171994e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.53720681171994e-11!GO:0048523;negative regulation of cellular process;8.65520618674725e-11!GO:0016070;RNA metabolic process;9.29936167371865e-11!GO:0006446;regulation of translational initiation;9.33715775421852e-11!GO:0012501;programmed cell death;9.33715775421852e-11!GO:0008565;protein transporter activity;1.3310399724828e-10!GO:0044431;Golgi apparatus part;1.747474460498e-10!GO:0031965;nuclear membrane;1.747474460498e-10!GO:0006915;apoptosis;1.91799116742508e-10!GO:0016604;nuclear body;4.43469378276631e-10!GO:0009055;electron carrier activity;4.57637843566638e-10!GO:0006732;coenzyme metabolic process;4.80563311728041e-10!GO:0042254;ribosome biogenesis and assembly;6.4050757260076e-10!GO:0008219;cell death;1.13657485696115e-09!GO:0016265;death;1.13657485696115e-09!GO:0005788;endoplasmic reticulum lumen;1.28986303096186e-09!GO:0003924;GTPase activity;1.88964053100908e-09!GO:0008639;small protein conjugating enzyme activity;1.88964053100908e-09!GO:0030120;vesicle coat;1.93163901084129e-09!GO:0030662;coated vesicle membrane;1.93163901084129e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.00058188245925e-09!GO:0005524;ATP binding;2.54685306260925e-09!GO:0048475;coated membrane;2.84494994908481e-09!GO:0030117;membrane coat;2.84494994908481e-09!GO:0019787;small conjugating protein ligase activity;2.89858999609548e-09!GO:0016023;cytoplasmic membrane-bound vesicle;2.96536970159316e-09!GO:0004842;ubiquitin-protein ligase activity;3.00500291058733e-09!GO:0031988;membrane-bound vesicle;3.01828723167661e-09!GO:0048519;negative regulation of biological process;3.02749767382268e-09!GO:0006913;nucleocytoplasmic transport;3.44882518859557e-09!GO:0009259;ribonucleotide metabolic process;4.06612536614407e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;4.08451137180602e-09!GO:0032559;adenyl ribonucleotide binding;4.33403647466257e-09!GO:0044453;nuclear membrane part;4.88415112620778e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.89532588651277e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.55117291517889e-09!GO:0051169;nuclear transport;7.77525721908262e-09!GO:0006163;purine nucleotide metabolic process;9.94126606879936e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.22311454236937e-08!GO:0006323;DNA packaging;1.51096106203406e-08!GO:0016607;nuclear speck;1.55990374979161e-08!GO:0016887;ATPase activity;1.73640546762082e-08!GO:0009150;purine ribonucleotide metabolic process;1.76604846296824e-08!GO:0042623;ATPase activity, coupled;1.96060371115583e-08!GO:0051276;chromosome organization and biogenesis;2.33496889876997e-08!GO:0030554;adenyl nucleotide binding;2.52559932827408e-08!GO:0004386;helicase activity;2.68093070226429e-08!GO:0006164;purine nucleotide biosynthetic process;2.82249726525408e-08!GO:0031982;vesicle;3.18597031068969e-08!GO:0031410;cytoplasmic vesicle;3.44058100484129e-08!GO:0009260;ribonucleotide biosynthetic process;3.98196602802031e-08!GO:0051246;regulation of protein metabolic process;4.49165699207988e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.80180790377286e-08!GO:0005768;endosome;4.93466582499298e-08!GO:0016881;acid-amino acid ligase activity;5.64272458767902e-08!GO:0006974;response to DNA damage stimulus;6.37714048881671e-08!GO:0000139;Golgi membrane;6.71332377567796e-08!GO:0006461;protein complex assembly;6.76236877741545e-08!GO:0015986;ATP synthesis coupled proton transport;9.71955796349518e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.71955796349518e-08!GO:0006366;transcription from RNA polymerase II promoter;1.09248633324534e-07!GO:0008026;ATP-dependent helicase activity;1.10019177352978e-07!GO:0022402;cell cycle process;1.14653846742667e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.60385712968268e-07!GO:0009060;aerobic respiration;1.65214487087062e-07!GO:0009141;nucleoside triphosphate metabolic process;1.88271233616495e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.16058378066732e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.16058378066732e-07!GO:0017038;protein import;2.42379038721018e-07!GO:0005798;Golgi-associated vesicle;2.43689150013903e-07!GO:0006399;tRNA metabolic process;2.68417138967562e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.71515602282301e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.71515602282301e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.75000949578941e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.75000949578941e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.75000949578941e-07!GO:0005643;nuclear pore;2.82514548444433e-07!GO:0031252;leading edge;3.24283505861455e-07!GO:0032446;protein modification by small protein conjugation;3.35248525439134e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.6504434878533e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.6504434878533e-07!GO:0019829;cation-transporting ATPase activity;3.8878992342281e-07!GO:0050794;regulation of cellular process;3.99645141334533e-07!GO:0045333;cellular respiration;4.23020757267751e-07!GO:0043038;amino acid activation;4.35258738650268e-07!GO:0006418;tRNA aminoacylation for protein translation;4.35258738650268e-07!GO:0043039;tRNA aminoacylation;4.35258738650268e-07!GO:0065002;intracellular protein transport across a membrane;4.88296431873224e-07!GO:0005525;GTP binding;5.5959047503209e-07!GO:0016567;protein ubiquitination;5.67277243446728e-07!GO:0043067;regulation of programmed cell death;5.87726372705598e-07!GO:0043069;negative regulation of programmed cell death;6.73252472588555e-07!GO:0009056;catabolic process;6.81858847930272e-07!GO:0065004;protein-DNA complex assembly;7.02278285043817e-07!GO:0005667;transcription factor complex;7.26577652327611e-07!GO:0042981;regulation of apoptosis;8.12089094649347e-07!GO:0003714;transcription corepressor activity;1.00608505924105e-06!GO:0007005;mitochondrion organization and biogenesis;1.10912988343989e-06!GO:0016853;isomerase activity;1.52554558111137e-06!GO:0043066;negative regulation of apoptosis;1.61608963013278e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.80047074151435e-06!GO:0051726;regulation of cell cycle;1.90230340366084e-06!GO:0046034;ATP metabolic process;1.98410598898612e-06!GO:0006281;DNA repair;1.99895535870928e-06!GO:0000074;regulation of progression through cell cycle;2.02697814596649e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.0400085264849e-06!GO:0051188;cofactor biosynthetic process;2.04111291763659e-06!GO:0006754;ATP biosynthetic process;2.24702700857199e-06!GO:0006753;nucleoside phosphate metabolic process;2.24702700857199e-06!GO:0006403;RNA localization;2.27215015853956e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.44073029882357e-06!GO:0006364;rRNA processing;2.71587633709042e-06!GO:0050657;nucleic acid transport;2.71587633709042e-06!GO:0051236;establishment of RNA localization;2.71587633709042e-06!GO:0050658;RNA transport;2.71587633709042e-06!GO:0032561;guanyl ribonucleotide binding;3.09131047207458e-06!GO:0019001;guanyl nucleotide binding;3.09131047207458e-06!GO:0006333;chromatin assembly or disassembly;3.37095743172045e-06!GO:0006916;anti-apoptosis;3.37095743172045e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.61456292744982e-06!GO:0006099;tricarboxylic acid cycle;3.86740814137453e-06!GO:0046356;acetyl-CoA catabolic process;3.86740814137453e-06!GO:0030133;transport vesicle;3.98726456293168e-06!GO:0016568;chromatin modification;4.92071241833846e-06!GO:0046930;pore complex;5.2951004815576e-06!GO:0031324;negative regulation of cellular metabolic process;5.39589556051188e-06!GO:0005770;late endosome;5.80896936250783e-06!GO:0005905;coated pit;5.97809753497728e-06!GO:0043566;structure-specific DNA binding;6.01500390168292e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.01500390168292e-06!GO:0016072;rRNA metabolic process;6.03499402094158e-06!GO:0016564;transcription repressor activity;6.07711675561858e-06!GO:0030532;small nuclear ribonucleoprotein complex;6.17922376056429e-06!GO:0044440;endosomal part;7.01021998840486e-06!GO:0010008;endosome membrane;7.01021998840486e-06!GO:0005839;proteasome core complex (sensu Eukaryota);7.53058752779969e-06!GO:0006793;phosphorus metabolic process;7.64218791527128e-06!GO:0006796;phosphate metabolic process;7.64218791527128e-06!GO:0009719;response to endogenous stimulus;7.78997580122884e-06!GO:0045259;proton-transporting ATP synthase complex;8.02467977518032e-06!GO:0006613;cotranslational protein targeting to membrane;8.16537529256286e-06!GO:0003713;transcription coactivator activity;8.38608085241926e-06!GO:0009109;coenzyme catabolic process;8.44481609338332e-06!GO:0045786;negative regulation of progression through cell cycle;8.62667186013963e-06!GO:0000278;mitotic cell cycle;8.8700239912434e-06!GO:0016859;cis-trans isomerase activity;8.96140386836824e-06!GO:0016740;transferase activity;9.33496807236996e-06!GO:0000245;spliceosome assembly;1.01921013234556e-05!GO:0000151;ubiquitin ligase complex;1.16537803644861e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.16946235033186e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.22939261028506e-05!GO:0008654;phospholipid biosynthetic process;1.23968727873991e-05!GO:0006084;acetyl-CoA metabolic process;1.29728023434452e-05!GO:0005773;vacuole;1.34860508845813e-05!GO:0006752;group transfer coenzyme metabolic process;1.57396496162569e-05!GO:0009892;negative regulation of metabolic process;1.67806962068478e-05!GO:0009117;nucleotide metabolic process;1.83322339174643e-05!GO:0016563;transcription activator activity;1.91195404085579e-05!GO:0003697;single-stranded DNA binding;1.94057415958228e-05!GO:0051187;cofactor catabolic process;2.01315713332078e-05!GO:0050789;regulation of biological process;2.10667733367253e-05!GO:0016310;phosphorylation;2.13447285561651e-05!GO:0051170;nuclear import;2.34161181879952e-05!GO:0008361;regulation of cell size;2.53576033518197e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.54699980863523e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.14139215677596e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.28285553798513e-05!GO:0016787;hydrolase activity;3.83596282277924e-05!GO:0006606;protein import into nucleus;3.85440808700578e-05!GO:0016049;cell growth;3.97803317173334e-05!GO:0030867;rough endoplasmic reticulum membrane;4.19200361616223e-05!GO:0004298;threonine endopeptidase activity;4.41134228361732e-05!GO:0048471;perinuclear region of cytoplasm;4.50623796221086e-05!GO:0051028;mRNA transport;4.98350403082303e-05!GO:0009108;coenzyme biosynthetic process;4.98808224407143e-05!GO:0008092;cytoskeletal protein binding;5.32849615112398e-05!GO:0033116;ER-Golgi intermediate compartment membrane;6.62079642341442e-05!GO:0019899;enzyme binding;6.94878912527883e-05!GO:0016491;oxidoreductase activity;7.37575059206861e-05!GO:0003724;RNA helicase activity;7.96145444254334e-05!GO:0005791;rough endoplasmic reticulum;8.22756191770545e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;8.8488289222643e-05!GO:0000785;chromatin;8.85131681631742e-05!GO:0001558;regulation of cell growth;9.15859160134432e-05!GO:0000323;lytic vacuole;9.83979082747707e-05!GO:0005764;lysosome;9.83979082747707e-05!GO:0030029;actin filament-based process;9.84947454318606e-05!GO:0005694;chromosome;0.000100483811486167!GO:0051789;response to protein stimulus;0.000103314736445992!GO:0006986;response to unfolded protein;0.000103314736445992!GO:0015980;energy derivation by oxidation of organic compounds;0.000124907507363442!GO:0016044;membrane organization and biogenesis;0.000129629236698505!GO:0007264;small GTPase mediated signal transduction;0.000129806622069525!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000130218989225861!GO:0006334;nucleosome assembly;0.000130730051939085!GO:0005762;mitochondrial large ribosomal subunit;0.00013308008947826!GO:0000315;organellar large ribosomal subunit;0.00013308008947826!GO:0044262;cellular carbohydrate metabolic process;0.000147749938183033!GO:0045454;cell redox homeostasis;0.000149118639166647!GO:0051427;hormone receptor binding;0.000154843422920836!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000155994473752662!GO:0006612;protein targeting to membrane;0.000171151338028931!GO:0006260;DNA replication;0.000177570640863888!GO:0043623;cellular protein complex assembly;0.000179712232101578!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000179733971461726!GO:0043021;ribonucleoprotein binding;0.000205745934388303!GO:0030118;clathrin coat;0.000209389489788956!GO:0019843;rRNA binding;0.000210479410338259!GO:0016481;negative regulation of transcription;0.000221891466131191!GO:0007010;cytoskeleton organization and biogenesis;0.000251218688189384!GO:0008250;oligosaccharyl transferase complex;0.000256914042399849!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000262505432732363!GO:0016779;nucleotidyltransferase activity;0.000266837428790908!GO:0044427;chromosomal part;0.000281228582888942!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000288445632500718!GO:0030176;integral to endoplasmic reticulum membrane;0.000290540883931537!GO:0005769;early endosome;0.000297423580956084!GO:0030658;transport vesicle membrane;0.000305756472452663!GO:0035257;nuclear hormone receptor binding;0.000305756472452663!GO:0004576;oligosaccharyl transferase activity;0.000317905092816123!GO:0031497;chromatin assembly;0.000327598046135114!GO:0030659;cytoplasmic vesicle membrane;0.00034875010265473!GO:0005885;Arp2/3 protein complex;0.000350471823945615!GO:0030663;COPI coated vesicle membrane;0.000365268252795999!GO:0030126;COPI vesicle coat;0.000365268252795999!GO:0019867;outer membrane;0.000390369321983074!GO:0005048;signal sequence binding;0.000400921663708734!GO:0015630;microtubule cytoskeleton;0.000418721749098206!GO:0031072;heat shock protein binding;0.000422677863239529!GO:0031968;organelle outer membrane;0.000456859601795493!GO:0001726;ruffle;0.000489104855301909!GO:0018196;peptidyl-asparagine modification;0.000633771576157136!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000633771576157136!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000655574183237415!GO:0008610;lipid biosynthetic process;0.000676323237334984!GO:0030137;COPI-coated vesicle;0.000686209357013082!GO:0044433;cytoplasmic vesicle part;0.000687384102162347!GO:0030027;lamellipodium;0.000728444305150975!GO:0006414;translational elongation;0.000746547168034484!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000788781446390984!GO:0030660;Golgi-associated vesicle membrane;0.000821032418165734!GO:0016126;sterol biosynthetic process;0.000869008333037159!GO:0051920;peroxiredoxin activity;0.000874687787080639!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00102729575889815!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00103175330244229!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00103961093343385!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00108878278677064!GO:0003899;DNA-directed RNA polymerase activity;0.00109578128109839!GO:0016363;nuclear matrix;0.00109977518362929!GO:0051301;cell division;0.00115708402287812!GO:0046474;glycerophospholipid biosynthetic process;0.00125846793411684!GO:0003729;mRNA binding;0.00128287904698219!GO:0046467;membrane lipid biosynthetic process;0.00131117636081347!GO:0008186;RNA-dependent ATPase activity;0.0013129270585445!GO:0033673;negative regulation of kinase activity;0.0013809996364481!GO:0006469;negative regulation of protein kinase activity;0.0013809996364481!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00138976823636459!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00139671537424756!GO:0048522;positive regulation of cellular process;0.00144174184980951!GO:0019798;procollagen-proline dioxygenase activity;0.00146033876027811!GO:0000314;organellar small ribosomal subunit;0.00151835321854518!GO:0005763;mitochondrial small ribosomal subunit;0.00151835321854518!GO:0012506;vesicle membrane;0.00151971603071822!GO:0042802;identical protein binding;0.00153176711108759!GO:0030134;ER to Golgi transport vesicle;0.00155271448085534!GO:0006891;intra-Golgi vesicle-mediated transport;0.00157327358783388!GO:0007050;cell cycle arrest;0.00159913271338686!GO:0040008;regulation of growth;0.00167945617566297!GO:0048468;cell development;0.00170763152635922!GO:0005741;mitochondrial outer membrane;0.00182993889726754!GO:0007243;protein kinase cascade;0.00184330813100256!GO:0031543;peptidyl-proline dioxygenase activity;0.00192019977928345!GO:0003690;double-stranded DNA binding;0.00202279693795195!GO:0030127;COPII vesicle coat;0.00203087881474058!GO:0012507;ER to Golgi transport vesicle membrane;0.00203087881474058!GO:0051348;negative regulation of transferase activity;0.00203720508671723!GO:0043284;biopolymer biosynthetic process;0.00213949504109198!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00216704371120132!GO:0015399;primary active transmembrane transporter activity;0.00216704371120132!GO:0000059;protein import into nucleus, docking;0.00216704371120132!GO:0030132;clathrin coat of coated pit;0.00218209065209396!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00222309816212074!GO:0005813;centrosome;0.00227697402791516!GO:0048500;signal recognition particle;0.00235406529901971!GO:0051168;nuclear export;0.00240139619345758!GO:0000087;M phase of mitotic cell cycle;0.00250320287979296!GO:0009165;nucleotide biosynthetic process;0.00257840902961504!GO:0030119;AP-type membrane coat adaptor complex;0.00258288830870509!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0026716810165365!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0026716810165365!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0026716810165365!GO:0045045;secretory pathway;0.00280204505397022!GO:0006091;generation of precursor metabolites and energy;0.00280843357494581!GO:0022403;cell cycle phase;0.00285593729719012!GO:0006839;mitochondrial transport;0.0029153060390075!GO:0007067;mitosis;0.00293757622993366!GO:0006695;cholesterol biosynthetic process;0.00306654800286235!GO:0004004;ATP-dependent RNA helicase activity;0.00317395082021945!GO:0006383;transcription from RNA polymerase III promoter;0.00325339948093069!GO:0051252;regulation of RNA metabolic process;0.00335985846319232!GO:0006509;membrane protein ectodomain proteolysis;0.00366203770434636!GO:0033619;membrane protein proteolysis;0.00366203770434636!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00379638605754943!GO:0046489;phosphoinositide biosynthetic process;0.00380822585107718!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00383128680665499!GO:0030125;clathrin vesicle coat;0.00388512345226388!GO:0030665;clathrin coated vesicle membrane;0.00388512345226388!GO:0016197;endosome transport;0.00392450131133514!GO:0030131;clathrin adaptor complex;0.0039999179113251!GO:0065009;regulation of a molecular function;0.00409264936201366!GO:0043681;protein import into mitochondrion;0.0041518802190173!GO:0006402;mRNA catabolic process;0.00459118994492911!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00462415973837213!GO:0045047;protein targeting to ER;0.00462415973837213!GO:0008139;nuclear localization sequence binding;0.00466940922139676!GO:0051128;regulation of cellular component organization and biogenesis;0.00503923000987147!GO:0030521;androgen receptor signaling pathway;0.00526479741097773!GO:0005815;microtubule organizing center;0.00526479741097773!GO:0035258;steroid hormone receptor binding;0.00526570611482646!GO:0051329;interphase of mitotic cell cycle;0.00567431157630544!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00570586767927671!GO:0006352;transcription initiation;0.00578362996640235!GO:0006892;post-Golgi vesicle-mediated transport;0.00622706321216151!GO:0006626;protein targeting to mitochondrion;0.00627417577888409!GO:0000049;tRNA binding;0.0064545473042985!GO:0007040;lysosome organization and biogenesis;0.0064545473042985!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00652688769687201!GO:0045893;positive regulation of transcription, DNA-dependent;0.00679860645314761!GO:0015992;proton transport;0.00706597363783159!GO:0017166;vinculin binding;0.00711327865114978!GO:0048487;beta-tubulin binding;0.00725290088455197!GO:0030880;RNA polymerase complex;0.00743114874674802!GO:0006818;hydrogen transport;0.0078527812247221!GO:0007006;mitochondrial membrane organization and biogenesis;0.00789699300104553!GO:0008312;7S RNA binding;0.00797310976222751!GO:0008047;enzyme activator activity;0.00826770175598107!GO:0031418;L-ascorbic acid binding;0.00836003733255983!GO:0003711;transcription elongation regulator activity;0.00839093509981214!GO:0003779;actin binding;0.00841008496361415!GO:0051270;regulation of cell motility;0.00841008496361415!GO:0019222;regulation of metabolic process;0.00854422418091896!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00860260021815486!GO:0006650;glycerophospholipid metabolic process;0.00878631020813864!GO:0045892;negative regulation of transcription, DNA-dependent;0.00896811512302183!GO:0051325;interphase;0.00912637657600079!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00927653489171983!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00927653489171983!GO:0051087;chaperone binding;0.00932276878135393!GO:0031124;mRNA 3'-end processing;0.00940740209779069!GO:0007033;vacuole organization and biogenesis;0.00956334190652977!GO:0031902;late endosome membrane;0.00973252199675857!GO:0043488;regulation of mRNA stability;0.0101744045226092!GO:0043487;regulation of RNA stability;0.0101744045226092!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0102193007437837!GO:0005869;dynactin complex;0.0103068506824772!GO:0006897;endocytosis;0.0105905071142221!GO:0010324;membrane invagination;0.0105905071142221!GO:0006740;NADPH regeneration;0.0108239091395872!GO:0006098;pentose-phosphate shunt;0.0108239091395872!GO:0005862;muscle thin filament tropomyosin;0.0110274113631279!GO:0007265;Ras protein signal transduction;0.0111820498683726!GO:0008180;signalosome;0.0115527789650353!GO:0044452;nucleolar part;0.0118950548638428!GO:0000902;cell morphogenesis;0.0119088609556736!GO:0032989;cellular structure morphogenesis;0.0119088609556736!GO:0016251;general RNA polymerase II transcription factor activity;0.0120230457110448!GO:0000339;RNA cap binding;0.0121145819818638!GO:0031625;ubiquitin protein ligase binding;0.0122768449862216!GO:0000209;protein polyubiquitination;0.0122768449862216!GO:0032940;secretion by cell;0.0125149910367074!GO:0008286;insulin receptor signaling pathway;0.0125759287729509!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0126911614839665!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0129850355263271!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0129850355263271!GO:0031301;integral to organelle membrane;0.0131244064165689!GO:0065007;biological regulation;0.0131858337137626!GO:0006417;regulation of translation;0.0134568773229683!GO:0030384;phosphoinositide metabolic process;0.0140165991256417!GO:0043022;ribosome binding;0.0145168703591414!GO:0051101;regulation of DNA binding;0.0145286015723117!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0146712417873431!GO:0000428;DNA-directed RNA polymerase complex;0.0146712417873431!GO:0045941;positive regulation of transcription;0.0147152743991678!GO:0043492;ATPase activity, coupled to movement of substances;0.0148674921772104!GO:0005832;chaperonin-containing T-complex;0.015728630722928!GO:0051287;NAD binding;0.015955597881937!GO:0031123;RNA 3'-end processing;0.0160527112708151!GO:0006643;membrane lipid metabolic process;0.0161113385403995!GO:0007030;Golgi organization and biogenesis;0.0171085441728531!GO:0050811;GABA receptor binding;0.0178715917838396!GO:0015631;tubulin binding;0.0179600736130319!GO:0050681;androgen receptor binding;0.017971782917065!GO:0005669;transcription factor TFIID complex;0.0182961426627266!GO:0003684;damaged DNA binding;0.0185057017832613!GO:0003746;translation elongation factor activity;0.0185911580513136!GO:0006518;peptide metabolic process;0.0192015100316543!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0193900668647616!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0194008144382874!GO:0040011;locomotion;0.0198028792377756!GO:0031529;ruffle organization and biogenesis;0.0198612738119824!GO:0016272;prefoldin complex;0.0200538631305482!GO:0044420;extracellular matrix part;0.0205264988657186!GO:0051098;regulation of binding;0.0205765216683756!GO:0006672;ceramide metabolic process;0.0209817382114451!GO:0003682;chromatin binding;0.0213711905515948!GO:0040012;regulation of locomotion;0.0213711905515948!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0213941360348929!GO:0006979;response to oxidative stress;0.0213941360348929!GO:0050750;low-density lipoprotein receptor binding;0.0214757738083688!GO:0032984;macromolecular complex disassembly;0.0215742115616897!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0215742115616897!GO:0008022;protein C-terminus binding;0.021994451325887!GO:0016408;C-acyltransferase activity;0.0220748688651201!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0224062067006612!GO:0032906;transforming growth factor-beta2 production;0.0224062067006612!GO:0032909;regulation of transforming growth factor-beta2 production;0.0224062067006612!GO:0031901;early endosome membrane;0.0224773448671241!GO:0030145;manganese ion binding;0.0232202963391897!GO:0043624;cellular protein complex disassembly;0.0236406300243035!GO:0000082;G1/S transition of mitotic cell cycle;0.0246199596252111!GO:0005801;cis-Golgi network;0.0246610973602844!GO:0006497;protein amino acid lipidation;0.0246950382968022!GO:0008632;apoptotic program;0.0250009381299959!GO:0006611;protein export from nucleus;0.0251559121767655!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0251559121767655!GO:0015002;heme-copper terminal oxidase activity;0.0251559121767655!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0251559121767655!GO:0004129;cytochrome-c oxidase activity;0.0251559121767655!GO:0045792;negative regulation of cell size;0.0251751202629!GO:0046519;sphingoid metabolic process;0.025182673347158!GO:0000096;sulfur amino acid metabolic process;0.0251969300371649!GO:0005581;collagen;0.0253346355904442!GO:0008147;structural constituent of bone;0.0253990648808512!GO:0019752;carboxylic acid metabolic process;0.0260664236212446!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0261982995930735!GO:0016860;intramolecular oxidoreductase activity;0.0263500713336883!GO:0007034;vacuolar transport;0.026426170390961!GO:0030308;negative regulation of cell growth;0.026482313960954!GO:0006082;organic acid metabolic process;0.0265025533884252!GO:0008154;actin polymerization and/or depolymerization;0.0265025533884252!GO:0004674;protein serine/threonine kinase activity;0.0265025533884252!GO:0006790;sulfur metabolic process;0.0265465528098255!GO:0006595;polyamine metabolic process;0.0271661320511277!GO:0003756;protein disulfide isomerase activity;0.0277231033291215!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0277231033291215!GO:0005684;U2-dependent spliceosome;0.0302687277909286!GO:0016584;nucleosome positioning;0.0307504716697404!GO:0045936;negative regulation of phosphate metabolic process;0.0307504716697404!GO:0030518;steroid hormone receptor signaling pathway;0.0312341322820893!GO:0006289;nucleotide-excision repair;0.031532407106283!GO:0006338;chromatin remodeling;0.0317799320593117!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0320437638229085!GO:0006376;mRNA splice site selection;0.0322903235956737!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0322903235956737!GO:0008652;amino acid biosynthetic process;0.0325597273756633!GO:0043086;negative regulation of catalytic activity;0.0326772012852006!GO:0030140;trans-Golgi network transport vesicle;0.0326772012852006!GO:0043034;costamere;0.032848090279301!GO:0006144;purine base metabolic process;0.0330201757229568!GO:0042158;lipoprotein biosynthetic process;0.0330222251819238!GO:0050790;regulation of catalytic activity;0.0336507415446465!GO:0022406;membrane docking;0.0337411022800116!GO:0048278;vesicle docking;0.0337411022800116!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0343310764130856!GO:0033043;regulation of organelle organization and biogenesis;0.0343310764130856!GO:0051059;NF-kappaB binding;0.0353438834324722!GO:0008637;apoptotic mitochondrial changes;0.035869383174368!GO:0043241;protein complex disassembly;0.036062814514959!GO:0006984;ER-nuclear signaling pathway;0.036062814514959!GO:0030032;lamellipodium biogenesis;0.036159176445836!GO:0048518;positive regulation of biological process;0.0363257266335758!GO:0005938;cell cortex;0.0363262155833152!GO:0042585;germinal vesicle;0.0363373896881875!GO:0051540;metal cluster binding;0.0372964598118123!GO:0051536;iron-sulfur cluster binding;0.0372964598118123!GO:0006739;NADP metabolic process;0.0380003194528935!GO:0004177;aminopeptidase activity;0.0383142321531745!GO:0006378;mRNA polyadenylation;0.0383142321531745!GO:0030433;ER-associated protein catabolic process;0.0383932169013383!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0383932169013383!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0388195347137478!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0388195347137478!GO:0004860;protein kinase inhibitor activity;0.0388195347137478!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0392577860349043!GO:0006007;glucose catabolic process;0.0393486425905151!GO:0008538;proteasome activator activity;0.03948220515373!GO:0031371;ubiquitin conjugating enzyme complex;0.0395789270250735!GO:0046483;heterocycle metabolic process;0.0397584234572898!GO:0048819;regulation of hair follicle maturation;0.0398441068427107!GO:0051794;regulation of catagen;0.0398441068427107!GO:0051795;positive regulation of catagen;0.0398441068427107!GO:0048818;positive regulation of hair follicle maturation;0.0398441068427107!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0400179526156798!GO:0009889;regulation of biosynthetic process;0.0402691695606784!GO:0007021;tubulin folding;0.0402937993591026!GO:0006506;GPI anchor biosynthetic process;0.0403280194910596!GO:0022890;inorganic cation transmembrane transporter activity;0.0403280194910596!GO:0008033;tRNA processing;0.0408712006046791!GO:0045334;clathrin-coated endocytic vesicle;0.041405043011846!GO:0005637;nuclear inner membrane;0.0414657843843157!GO:0006354;RNA elongation;0.0414657843843157!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0414657843843157!GO:0005100;Rho GTPase activator activity;0.0414981177227276!GO:0009967;positive regulation of signal transduction;0.0415575689890422!GO:0006644;phospholipid metabolic process;0.0417988509491167!GO:0033559;unsaturated fatty acid metabolic process;0.0418169495026985!GO:0006636;unsaturated fatty acid biosynthetic process;0.0418169495026985!GO:0006505;GPI anchor metabolic process;0.0419983956841443!GO:0030833;regulation of actin filament polymerization;0.0424472991212477!GO:0006401;RNA catabolic process;0.0426719828561836!GO:0003923;GPI-anchor transamidase activity;0.0431202922277581!GO:0016255;attachment of GPI anchor to protein;0.0431202922277581!GO:0042765;GPI-anchor transamidase complex;0.0431202922277581!GO:0030100;regulation of endocytosis;0.043703382368556!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0442347777593166!GO:0001952;regulation of cell-matrix adhesion;0.0444365840190503!GO:0031326;regulation of cellular biosynthetic process;0.044871167908828!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0450206947542052!GO:0030041;actin filament polymerization;0.0453228411815929!GO:0005784;translocon complex;0.046105819228267!GO:0006607;NLS-bearing substrate import into nucleus;0.0462976751582244!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0462997605723979!GO:0005099;Ras GTPase activator activity;0.046758711333406!GO:0031575;G1/S transition checkpoint;0.046758711333406!GO:0006904;vesicle docking during exocytosis;0.0468213222758575!GO:0006720;isoprenoid metabolic process;0.0468377651189878!GO:0005975;carbohydrate metabolic process;0.0470474334141259!GO:0035035;histone acetyltransferase binding;0.0471272726683603!GO:0007004;telomere maintenance via telomerase;0.0471272726683603!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0477399570563317!GO:0048144;fibroblast proliferation;0.0477678218444668!GO:0048145;regulation of fibroblast proliferation;0.0477678218444668!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0477678218444668!GO:0022408;negative regulation of cell-cell adhesion;0.0478394350851615!GO:0051052;regulation of DNA metabolic process;0.0480666488209473!GO:0005774;vacuolar membrane;0.0484271763315218!GO:0008287;protein serine/threonine phosphatase complex;0.0492440846294568!GO:0035267;NuA4 histone acetyltransferase complex;0.0494494303585437!GO:0008234;cysteine-type peptidase activity;0.049941954940561!GO:0000786;nucleosome;0.0499472095669902
 |sample_id=11690
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=eye
 |top_motifs=NKX3-1:1.67458090786;PAX1,9:1.43948876933;NKX2-1,4:1.39311545787;SOX17:1.34922324561;TAL1_TCF{3,4,12}:1.26360954985;NFATC1..3:1.23781901264;HSF1,2:1.20486422597;SRF:1.20156797369;MAZ:1.19669779524;TEAD1:1.18602556062;NR3C1:1.14600659144;HIF1A:1.1082525395;EN1,2:1.10810519432;MZF1:1.08030255374;HOX{A5,B5}:1.03222867532;SOX2:0.985583607861;TFAP4:0.972544973297;ZNF384:0.95592569357;T:0.930615005345;IKZF1:0.913015505665;GTF2A1,2:0.902052300206;MTE{core}:0.890286127921;POU3F1..4:0.882811056484;ATF6:0.862442156426;TBX4,5:0.850887673411;NANOG{mouse}:0.839996168007;SMAD1..7,9:0.832268455679;MYBL2:0.826551290137;GLI1..3:0.819945114044;PATZ1:0.818357976883;NHLH1,2:0.784699212228;TFAP2{A,C}:0.773109598019;TP53:0.769993216088;GTF2I:0.754009469398;TFCP2:0.724785109751;TLX1..3_NFIC{dimer}:0.706795583492;FOXA2:0.694169239519;LHX3,4:0.669436771304;NANOG:0.658423414898;GFI1B:0.655309768394;POU5F1:0.61474953148;ZFP161:0.608167897766;ZNF148:0.60581283662;EGR1..3:0.596703741776;NKX2-3_NKX2-5:0.587812843673;DBP:0.581126999405;CDC5L:0.553082161845;PAX5:0.536288095205;EBF1:0.526109324033;KLF4:0.514478462286;PRDM1:0.498185934662;MYFfamily:0.479876273046;MAFB:0.47853596945;TBP:0.468760747721;CRX:0.45980369185;ADNP_IRX_SIX_ZHX:0.458584868453;SP1:0.455328727188;ONECUT1,2:0.443751842858;LEF1_TCF7_TCF7L1,2:0.438116609269;AHR_ARNT_ARNT2:0.412194525861;ALX1:0.410811395206;NR6A1:0.389954898913;PAX4:0.371970830638;FOXN1:0.351773609111;HIC1:0.351198949858;PDX1:0.346814457573;GFI1:0.341707761391;ZNF423:0.339746424514;GATA4:0.336169337536;NFE2L2:0.316447550594;PAX8:0.315174128704;PRRX1,2:0.307559452183;ZIC1..3:0.305523415376;HOX{A4,D4}:0.301903632677;XCPE1{core}:0.301264701944;FOSL2:0.295775808938;TFAP2B:0.286858289188;NKX3-2:0.281702656678;RXR{A,B,G}:0.274407763198;VSX1,2:0.261164804933;NRF1:0.223182694904;ALX4:0.217496264713;EVI1:0.213501677471;TLX2:0.205982229324;HMGA1,2:0.200646831276;XBP1:0.198554114306;ZBTB6:0.190170841652;TFDP1:0.170107182689;STAT5{A,B}:0.160391202865;NFE2L1:0.15612242294;HOXA9_MEIS1:0.152984500573;NFIX:0.138738316922;MED-1{core}:0.138586080087;FOXM1:0.136864155107;JUN:0.132768332948;STAT1,3:0.12224464556;ELK1,4_GABP{A,B1}:0.1143591815;NFY{A,B,C}:0.0917675012653;RORA:0.0839246809576;ZNF143:0.0836742688914;TEF:0.0834139449426;REST:0.0516880823287;HNF1A:0.0478759129894;AR:0.0351637172283;BACH2:0.0348697300141;AIRE:0.0325187186054;FOXP3:0.0282892224121;HLF:0.022446491684;UFEwm:0.0163746298552;RFX1:0.0155969145082;ELF1,2,4:0.0114171446822;HNF4A_NR2F1,2:0.0087330075171;SPZ1:-0.00355215340229;HOX{A6,A7,B6,B7}:-0.00649853712399;bHLH_family:-0.0101732179176;NFE2:-0.0237164732144;NR1H4:-0.0355901344537;GZF1:-0.0359008252364;CUX2:-0.0449482967533;RBPJ:-0.047398418698;FOXQ1:-0.0652994981583;NFIL3:-0.0711118850371;MEF2{A,B,C,D}:-0.0784443691061;GATA6:-0.0821938502787;POU6F1:-0.0825568209298;PAX6:-0.0964393956702;MYOD1:-0.102091955371;FOX{D1,D2}:-0.107310536345;RREB1:-0.110916122746;MTF1:-0.114777491656;PAX2:-0.11590239335;IRF7:-0.12476763092;FOS_FOS{B,L1}_JUN{B,D}:-0.132322190524;OCT4_SOX2{dimer}:-0.136370413265;HMX1:-0.136948221071;HAND1,2:-0.13757893622;ATF2:-0.138914546963;CDX1,2,4:-0.140819645839;TGIF1:-0.149885906859;ZNF238:-0.160305452065;PPARG:-0.164789116545;SOX5:-0.184558695975;PBX1:-0.185997436751;CEBPA,B_DDIT3:-0.195885604859;IRF1,2:-0.196148279387;SREBF1,2:-0.206890028898;RUNX1..3:-0.225016570061;SOX{8,9,10}:-0.253273102409;ATF4:-0.274335692534;FOX{I1,J2}:-0.276497232213;NFKB1_REL_RELA:-0.280782494275;HBP1_HMGB_SSRP1_UBTF:-0.29598086777;BREu{core}:-0.316259834833;ZEB1:-0.322596697214;FOX{F1,F2,J1}:-0.322838282573;SNAI1..3:-0.325800186995;LMO2:-0.331817123215;EP300:-0.349750368321;ETS1,2:-0.351187139085;MYB:-0.377507594249;TOPORS:-0.379376853544;NR5A1,2:-0.379953936866;ATF5_CREB3:-0.3829318602;SPI1:-0.385737782584;STAT2,4,6:-0.392629418042;GCM1,2:-0.423419922596;E2F1..5:-0.479510880058;ESRRA:-0.5031493446;YY1:-0.516139765613;SPIB:-0.526116057979;NKX2-2,8:-0.530262343473;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.530728263858;BPTF:-0.535896672523;ARID5B:-0.540648524139;DMAP1_NCOR{1,2}_SMARC:-0.54463842395;RFX2..5_RFXANK_RFXAP:-0.567803995577;POU2F1..3:-0.56783071965;FOXL1:-0.620979006965;RXRA_VDR{dimer}:-0.647022361766;POU1F1:-0.65316290194;ESR1:-0.688416561939;FOXO1,3,4:-0.730227491875;PAX3,7:-0.822284658351;NKX6-1,2:-0.891287515332;ZBTB16:-0.920160397998;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.950518278456;CREB1:-0.954637039973;IKZF2:-1.01000316417;HES1:-1.09708170538;PITX1..3:-1.09719954736;FOXP1:-1.18917940598;FOXD3:-1.26546068335
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11690-122I7;search_select_hide=table117:FF:11690-122I7
 }}

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FF:11690-122I7: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:15, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0