FF:11566-120D9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005069 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005069 | ||
|accession_numbers=CAGE;DRX008333;DRR009205;DRZ000630;DRZ002015;DRZ011980;DRZ013365 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037237;DRR041603;DRZ007245 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0000151,CL:0002371,CL:0000766,CL:0002274,CL:0000219,CL:0000163,CL:0000457,CL:0000738,CL:0000255,CL:0000097 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000260,FF:0000261 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor3.CNhs12593.11566-120D9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor3.CNhs12593.11566-120D9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor3.CNhs12593.11566-120D9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor3.CNhs12593.11566-120D9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor3.CNhs12593.11566-120D9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11566-120D9 | |id=FF:11566-120D9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0000261 | ||
|is_obsolete= | |||
|library_id=CNhs12593 | |||
|library_id_phase_based=2:CNhs12593 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11566 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10014.AGTTCC.11566 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11566 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10014.AGTTCC.11566 | |||
|name=Mast cell, donor3 | |name=Mast cell, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12593,LSID912,release011,COMPLETED | |profile_hcage=CNhs12593,LSID912,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10014,,, | |profile_srnaseq=SRhi10014,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=120 | |rna_box=120 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 56: | Line 82: | ||
|rna_tube_id=120D9 | |rna_tube_id=120D9 | ||
|rna_weight_ug=7.9 | |rna_weight_ug=7.9 | ||
|rnaseq_library_id=SRhi10014.AGTTCC | |||
|sample_age=76 | |sample_age=76 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition=control, untreated cells | |sample_experimental_condition=control, untreated cells | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.01285876609181e-229!GO:0043227;membrane-bound organelle;7.2107081423846e-196!GO:0043231;intracellular membrane-bound organelle;1.55354176278952e-195!GO:0043226;organelle;2.56644415589759e-192!GO:0043229;intracellular organelle;1.06303696770873e-191!GO:0005737;cytoplasm;1.49598050135993e-134!GO:0005634;nucleus;3.30402329563501e-107!GO:0043170;macromolecule metabolic process;4.02229602511678e-103!GO:0044422;organelle part;1.48239091445614e-99!GO:0044446;intracellular organelle part;5.07093675010682e-98!GO:0044238;primary metabolic process;1.23563645130328e-96!GO:0044237;cellular metabolic process;1.56587757533624e-95!GO:0044444;cytoplasmic part;6.70163412813404e-87!GO:0043283;biopolymer metabolic process;5.85432805212379e-79!GO:0005515;protein binding;3.56746021925883e-73!GO:0010467;gene expression;2.02236401322472e-67!GO:0032991;macromolecular complex;2.40173884131387e-64!GO:0044428;nuclear part;4.59506644842038e-64!GO:0003723;RNA binding;2.65680651305278e-62!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.75274440551634e-60!GO:0030529;ribonucleoprotein complex;1.56016614390703e-57!GO:0043233;organelle lumen;1.60123374183678e-52!GO:0031974;membrane-enclosed lumen;1.60123374183678e-52!GO:0003676;nucleic acid binding;9.51088819639356e-50!GO:0033036;macromolecule localization;8.04169021192225e-48!GO:0015031;protein transport;1.08856588152364e-46!GO:0045184;establishment of protein localization;1.32842981220089e-44!GO:0019538;protein metabolic process;2.54772342728155e-44!GO:0008104;protein localization;3.55252756122794e-44!GO:0016070;RNA metabolic process;3.90474973988132e-44!GO:0031981;nuclear lumen;1.11248976782864e-41!GO:0044267;cellular protein metabolic process;1.11248976782864e-41!GO:0044260;cellular macromolecule metabolic process;9.78496947471665e-41!GO:0006396;RNA processing;4.01830704969665e-40!GO:0016071;mRNA metabolic process;4.54419136590304e-38!GO:0016043;cellular component organization and biogenesis;6.19866861720437e-37!GO:0031090;organelle membrane;2.59124247549154e-35!GO:0008380;RNA splicing;3.15252863619937e-34!GO:0005739;mitochondrion;3.9608077557812e-34!GO:0006397;mRNA processing;4.05411404343924e-32!GO:0006412;translation;4.58955893819333e-32!GO:0046907;intracellular transport;1.17865249131246e-31!GO:0043234;protein complex;1.32274362468678e-31!GO:0005829;cytosol;7.45664553735723e-30!GO:0050794;regulation of cellular process;2.05281779507317e-29!GO:0005840;ribosome;2.10036577228729e-29!GO:0006886;intracellular protein transport;1.07957032524369e-28!GO:0005654;nucleoplasm;8.84654605616003e-28!GO:0006996;organelle organization and biogenesis;2.95337059427737e-26!GO:0031967;organelle envelope;2.80634432488446e-25!GO:0006259;DNA metabolic process;5.35514196738761e-25!GO:0003735;structural constituent of ribosome;5.53686670510055e-25!GO:0031975;envelope;5.8450353342384e-25!GO:0008134;transcription factor binding;5.86716341126295e-25!GO:0065003;macromolecular complex assembly;7.43909739895143e-25!GO:0000166;nucleotide binding;7.79326074588721e-25!GO:0009059;macromolecule biosynthetic process;3.12896057599455e-24!GO:0005681;spliceosome;4.31784906906221e-24!GO:0033279;ribosomal subunit;8.01498508358258e-24!GO:0044451;nucleoplasm part;6.76042273839437e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.45177901272812e-23!GO:0019222;regulation of metabolic process;1.18429098544242e-22!GO:0044429;mitochondrial part;1.49606138976026e-22!GO:0043412;biopolymer modification;1.82183346970939e-22!GO:0051649;establishment of cellular localization;3.06339582630505e-22!GO:0050789;regulation of biological process;3.5832332224817e-22!GO:0051641;cellular localization;9.4885575450396e-22!GO:0022607;cellular component assembly;1.75670550907977e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.30334937070771e-21!GO:0006512;ubiquitin cycle;8.78627473543202e-21!GO:0009058;biosynthetic process;1.87759802295618e-20!GO:0006464;protein modification process;1.90971630761472e-20!GO:0043687;post-translational protein modification;3.64142966128412e-20!GO:0044249;cellular biosynthetic process;6.95618406366069e-20!GO:0031323;regulation of cellular metabolic process;2.4170032314707e-19!GO:0006350;transcription;2.90847046150367e-19!GO:0044445;cytosolic part;7.75071844180564e-19!GO:0010468;regulation of gene expression;5.64119066382421e-18!GO:0032553;ribonucleotide binding;7.99380942271374e-18!GO:0032555;purine ribonucleotide binding;7.99380942271374e-18!GO:0043228;non-membrane-bound organelle;1.05742601246127e-17!GO:0043232;intracellular non-membrane-bound organelle;1.05742601246127e-17!GO:0048770;pigment granule;4.95054737026811e-17!GO:0042470;melanosome;4.95054737026811e-17!GO:0032774;RNA biosynthetic process;5.3935371440363e-17!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.05624008479019e-17!GO:0003712;transcription cofactor activity;6.47027580337387e-17!GO:0006351;transcription, DNA-dependent;6.84379976933716e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.18789537367873e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.55902026926288e-16!GO:0017076;purine nucleotide binding;1.56891278725488e-16!GO:0005740;mitochondrial envelope;1.57592623383676e-16!GO:0019941;modification-dependent protein catabolic process;1.77253512113535e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.77253512113535e-16!GO:0005794;Golgi apparatus;2.37763144502083e-16!GO:0044257;cellular protein catabolic process;3.01952279381234e-16!GO:0016462;pyrophosphatase activity;4.55668965894674e-16!GO:0006366;transcription from RNA polymerase II promoter;5.00464079546844e-16!GO:0016192;vesicle-mediated transport;5.34123837012273e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.10942744979073e-16!GO:0017111;nucleoside-triphosphatase activity;6.36489351188904e-16!GO:0065007;biological regulation;6.5138572608542e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;7.02615739888102e-16!GO:0022618;protein-RNA complex assembly;1.12122741670892e-15!GO:0012505;endomembrane system;1.49217815127274e-15!GO:0016874;ligase activity;1.60470633584141e-15!GO:0048523;negative regulation of cellular process;1.84653607106463e-15!GO:0031966;mitochondrial membrane;2.17448212309496e-15!GO:0019866;organelle inner membrane;2.27256505710295e-15!GO:0016604;nuclear body;2.36718765331184e-15!GO:0045449;regulation of transcription;2.43121182656189e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;3.23156295514816e-15!GO:0012501;programmed cell death;6.4239036521453e-15!GO:0006915;apoptosis;8.68525719653954e-15!GO:0006355;regulation of transcription, DNA-dependent;1.7009385282462e-14!GO:0006119;oxidative phosphorylation;1.77376426352319e-14!GO:0044265;cellular macromolecule catabolic process;1.93449784494747e-14!GO:0006323;DNA packaging;2.15887633192275e-14!GO:0008219;cell death;2.7702857242864e-14!GO:0016265;death;2.7702857242864e-14!GO:0048519;negative regulation of biological process;4.95416215587637e-14!GO:0006793;phosphorus metabolic process;4.98572550291209e-14!GO:0006796;phosphate metabolic process;4.98572550291209e-14!GO:0008270;zinc ion binding;5.29097277612919e-14!GO:0016607;nuclear speck;7.50426214357717e-14!GO:0043285;biopolymer catabolic process;1.00539842557425e-13!GO:0006605;protein targeting;1.03665729062487e-13!GO:0005743;mitochondrial inner membrane;1.81273153855283e-13!GO:0051276;chromosome organization and biogenesis;2.22091291498934e-13!GO:0005730;nucleolus;2.45342494742124e-13!GO:0005524;ATP binding;3.11389586577183e-13!GO:0007049;cell cycle;8.9966375214484e-13!GO:0015934;large ribosomal subunit;9.11750514611606e-13!GO:0032559;adenyl ribonucleotide binding;9.37028211017102e-13!GO:0006457;protein folding;1.15386911162414e-12!GO:0008135;translation factor activity, nucleic acid binding;1.64121447126457e-12!GO:0006974;response to DNA damage stimulus;2.25084944638912e-12!GO:0016310;phosphorylation;4.38635761707303e-12!GO:0003677;DNA binding;5.35034638828806e-12!GO:0016568;chromatin modification;5.35034638828806e-12!GO:0030163;protein catabolic process;5.5508144742216e-12!GO:0015935;small ribosomal subunit;6.0451153657888e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.37702341661956e-12!GO:0044455;mitochondrial membrane part;8.38062940356334e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.05196278050527e-11!GO:0000375;RNA splicing, via transesterification reactions;1.05196278050527e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.05196278050527e-11!GO:0030554;adenyl nucleotide binding;1.75549917353039e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.94031522016179e-11!GO:0048193;Golgi vesicle transport;2.19450772105627e-11!GO:0016563;transcription activator activity;2.73667884096642e-11!GO:0005768;endosome;3.10675972993824e-11!GO:0006913;nucleocytoplasmic transport;5.41681011752371e-11!GO:0007242;intracellular signaling cascade;7.14971381716779e-11!GO:0051169;nuclear transport;8.80748444805217e-11!GO:0009057;macromolecule catabolic process;1.02272825850405e-10!GO:0007264;small GTPase mediated signal transduction;1.52228192020037e-10!GO:0003713;transcription coactivator activity;1.78537300576213e-10!GO:0007243;protein kinase cascade;1.8480568814239e-10!GO:0016564;transcription repressor activity;1.91260697050446e-10!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.39095192297474e-10!GO:0006413;translational initiation;3.85100448015939e-10!GO:0006446;regulation of translational initiation;4.85451299294135e-10!GO:0031324;negative regulation of cellular metabolic process;6.14369430477843e-10!GO:0006281;DNA repair;6.27152171106927e-10!GO:0046914;transition metal ion binding;8.1690064780528e-10!GO:0008639;small protein conjugating enzyme activity;9.03919697128427e-10!GO:0005746;mitochondrial respiratory chain;9.73458189824356e-10!GO:0005635;nuclear envelope;1.44507867636254e-09!GO:0004842;ubiquitin-protein ligase activity;1.53724776311978e-09!GO:0003743;translation initiation factor activity;1.89589580473207e-09!GO:0000502;proteasome complex (sensu Eukaryota);2.17737190737622e-09!GO:0016481;negative regulation of transcription;3.57344683849389e-09!GO:0019787;small conjugating protein ligase activity;4.63305978652252e-09!GO:0051082;unfolded protein binding;5.10168889109659e-09!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.61121943551899e-09!GO:0006333;chromatin assembly or disassembly;6.84074822959204e-09!GO:0009892;negative regulation of metabolic process;7.76819417324931e-09!GO:0051726;regulation of cell cycle;8.31839139323275e-09!GO:0031965;nuclear membrane;8.46870701499082e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.08606487128083e-08!GO:0000074;regulation of progression through cell cycle;1.15678600304979e-08!GO:0044248;cellular catabolic process;1.40499683825603e-08!GO:0043566;structure-specific DNA binding;1.50404973093679e-08!GO:0050136;NADH dehydrogenase (quinone) activity;1.698905089774e-08!GO:0003954;NADH dehydrogenase activity;1.698905089774e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.698905089774e-08!GO:0065004;protein-DNA complex assembly;2.19797038652489e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.23493336536464e-08!GO:0022402;cell cycle process;2.45370417981138e-08!GO:0005783;endoplasmic reticulum;2.64721881110444e-08!GO:0031980;mitochondrial lumen;2.70245856784728e-08!GO:0005759;mitochondrial matrix;2.70245856784728e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.72463075446714e-08!GO:0004386;helicase activity;3.91366889515293e-08!GO:0017038;protein import;3.93323187952718e-08!GO:0016881;acid-amino acid ligase activity;4.10507124420799e-08!GO:0045786;negative regulation of progression through cell cycle;4.52145152302709e-08!GO:0009719;response to endogenous stimulus;4.66201525844823e-08!GO:0003924;GTPase activity;5.07108501458441e-08!GO:0042981;regulation of apoptosis;5.20557212631921e-08!GO:0016740;transferase activity;5.6257285164062e-08!GO:0044431;Golgi apparatus part;6.25083340958082e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.68773813668581e-08!GO:0043067;regulation of programmed cell death;7.10067399703479e-08!GO:0005525;GTP binding;7.35279573490264e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.44259621110822e-08!GO:0050657;nucleic acid transport;7.69096328275102e-08!GO:0051236;establishment of RNA localization;7.69096328275102e-08!GO:0050658;RNA transport;7.69096328275102e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.83557827881274e-08!GO:0006403;RNA localization;1.1626776220695e-07!GO:0005694;chromosome;1.24685242364045e-07!GO:0019899;enzyme binding;1.49092612710573e-07!GO:0008565;protein transporter activity;1.93682993933955e-07!GO:0044453;nuclear membrane part;2.00546795137213e-07!GO:0004674;protein serine/threonine kinase activity;2.00546795137213e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.11326834872373e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.2599273764429e-07!GO:0019829;cation-transporting ATPase activity;2.27554042352977e-07!GO:0016887;ATPase activity;2.32693107614406e-07!GO:0042775;organelle ATP synthesis coupled electron transport;2.34216173890265e-07!GO:0042773;ATP synthesis coupled electron transport;2.34216173890265e-07!GO:0031982;vesicle;2.67678567022808e-07!GO:0042623;ATPase activity, coupled;2.89607543649274e-07!GO:0030964;NADH dehydrogenase complex (quinone);3.11602898934729e-07!GO:0045271;respiratory chain complex I;3.11602898934729e-07!GO:0005747;mitochondrial respiratory chain complex I;3.11602898934729e-07!GO:0030120;vesicle coat;3.43255533018676e-07!GO:0030662;coated vesicle membrane;3.43255533018676e-07!GO:0042254;ribosome biogenesis and assembly;4.04992273257861e-07!GO:0005773;vacuole;4.14837951704697e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.14837951704697e-07!GO:0031988;membrane-bound vesicle;4.23409955040323e-07!GO:0032561;guanyl ribonucleotide binding;4.38891915174512e-07!GO:0019001;guanyl nucleotide binding;4.38891915174512e-07!GO:0003697;single-stranded DNA binding;4.72331879334012e-07!GO:0008026;ATP-dependent helicase activity;5.27607542252969e-07!GO:0030695;GTPase regulator activity;5.30356357553253e-07!GO:0016197;endosome transport;5.55283429666769e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.92981130157793e-07!GO:0005793;ER-Golgi intermediate compartment;8.83531133761623e-07!GO:0045892;negative regulation of transcription, DNA-dependent;9.06077276028371e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.41273742656395e-07!GO:0015986;ATP synthesis coupled proton transport;9.88201889105266e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.88201889105266e-07!GO:0051246;regulation of protein metabolic process;1.01709054510396e-06!GO:0031410;cytoplasmic vesicle;1.19653162757847e-06!GO:0051170;nuclear import;1.27340707363899e-06!GO:0003714;transcription corepressor activity;1.27387370626317e-06!GO:0051028;mRNA transport;1.40424586834605e-06!GO:0043069;negative regulation of programmed cell death;1.50458486258409e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.57131215478639e-06!GO:0044440;endosomal part;1.60511305335991e-06!GO:0010008;endosome membrane;1.60511305335991e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.6315740784867e-06!GO:0006606;protein import into nucleus;1.64630451539664e-06!GO:0048475;coated membrane;1.78147750706467e-06!GO:0030117;membrane coat;1.78147750706467e-06!GO:0043066;negative regulation of apoptosis;2.21539649633905e-06!GO:0044432;endoplasmic reticulum part;2.36607810676694e-06!GO:0006260;DNA replication;2.4316642721051e-06!GO:0016301;kinase activity;2.77604263862608e-06!GO:0005643;nuclear pore;2.93561645228727e-06!GO:0005798;Golgi-associated vesicle;2.9983317375299e-06!GO:0044427;chromosomal part;3.65739869350718e-06!GO:0006916;anti-apoptosis;3.72073139213499e-06!GO:0005770;late endosome;4.20033288280165e-06!GO:0000785;chromatin;4.38865159686998e-06!GO:0005083;small GTPase regulator activity;6.19183970154279e-06!GO:0000323;lytic vacuole;6.35572116331629e-06!GO:0005764;lysosome;6.35572116331629e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.60846010743894e-06!GO:0009966;regulation of signal transduction;6.90201582312239e-06!GO:0051186;cofactor metabolic process;7.66388868662471e-06!GO:0006461;protein complex assembly;8.46887342403464e-06!GO:0005769;early endosome;9.52533392077832e-06!GO:0065009;regulation of a molecular function;9.55787244584199e-06!GO:0007265;Ras protein signal transduction;9.63656600206176e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.12925743129688e-05!GO:0005813;centrosome;1.16523580911147e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.33387536656269e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.33387536656269e-05!GO:0000139;Golgi membrane;1.47731730924574e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.50639143652914e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.64754675040237e-05!GO:0006754;ATP biosynthetic process;1.74008600456874e-05!GO:0006753;nucleoside phosphate metabolic process;1.74008600456874e-05!GO:0065002;intracellular protein transport across a membrane;1.82564005005108e-05!GO:0051789;response to protein stimulus;1.85728782166826e-05!GO:0006986;response to unfolded protein;1.85728782166826e-05!GO:0006364;rRNA processing;1.8834922046624e-05!GO:0016072;rRNA metabolic process;2.0961786171621e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.2804969070542e-05!GO:0048522;positive regulation of cellular process;2.31487417442099e-05!GO:0016773;phosphotransferase activity, alcohol group as acceptor;2.33395773230307e-05!GO:0006164;purine nucleotide biosynthetic process;2.39430226963877e-05!GO:0015630;microtubule cytoskeleton;2.40218304711008e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.50531699370776e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.50531699370776e-05!GO:0009152;purine ribonucleotide biosynthetic process;2.50634567956849e-05!GO:0000245;spliceosome assembly;2.63534741562792e-05!GO:0051427;hormone receptor binding;2.65572264928083e-05!GO:0005789;endoplasmic reticulum membrane;2.77276827064211e-05!GO:0003724;RNA helicase activity;2.88485424792055e-05!GO:0009260;ribonucleotide biosynthetic process;2.91865865099604e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.9363679898934e-05!GO:0016363;nuclear matrix;3.12365723787438e-05!GO:0032446;protein modification by small protein conjugation;3.1563051147015e-05!GO:0009259;ribonucleotide metabolic process;3.72723279265184e-05!GO:0006163;purine nucleotide metabolic process;4.01838625275084e-05!GO:0009150;purine ribonucleotide metabolic process;4.59951436582106e-05!GO:0000151;ubiquitin ligase complex;4.62478197877544e-05!GO:0035257;nuclear hormone receptor binding;4.71673281653165e-05!GO:0008047;enzyme activator activity;4.92496948790183e-05!GO:0006613;cotranslational protein targeting to membrane;4.99457749717639e-05!GO:0007005;mitochondrion organization and biogenesis;5.14130398911955e-05!GO:0006402;mRNA catabolic process;5.39920182667426e-05!GO:0005096;GTPase activator activity;5.48363176388216e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.6416830600194e-05!GO:0009144;purine nucleoside triphosphate metabolic process;5.6416830600194e-05!GO:0006732;coenzyme metabolic process;5.67790559698227e-05!GO:0016567;protein ubiquitination;6.1869268118109e-05!GO:0005761;mitochondrial ribosome;6.35456100847352e-05!GO:0000313;organellar ribosome;6.35456100847352e-05!GO:0033673;negative regulation of kinase activity;7.05994463950394e-05!GO:0006469;negative regulation of protein kinase activity;7.05994463950394e-05!GO:0006334;nucleosome assembly;7.17156519163936e-05!GO:0046930;pore complex;8.0790207333531e-05!GO:0031497;chromatin assembly;8.19567161946545e-05!GO:0008654;phospholipid biosynthetic process;8.38002418853326e-05!GO:0031252;leading edge;8.49333498597926e-05!GO:0005815;microtubule organizing center;8.77854963580101e-05!GO:0009199;ribonucleoside triphosphate metabolic process;9.42436566151192e-05!GO:0003702;RNA polymerase II transcription factor activity;9.77671289611119e-05!GO:0030384;phosphoinositide metabolic process;0.00010306984835598!GO:0003690;double-stranded DNA binding;0.000108741724878986!GO:0046034;ATP metabolic process;0.000110018449264625!GO:0009967;positive regulation of signal transduction;0.000123508830644458!GO:0009060;aerobic respiration;0.000145455673513063!GO:0045259;proton-transporting ATP synthase complex;0.00014591921011102!GO:0006650;glycerophospholipid metabolic process;0.000146091589155479!GO:0016787;hydrolase activity;0.000150660187370871!GO:0008234;cysteine-type peptidase activity;0.00017074120343286!GO:0009141;nucleoside triphosphate metabolic process;0.000177862425779616!GO:0003729;mRNA binding;0.000177959359634198!GO:0016779;nucleotidyltransferase activity;0.000178084904523478!GO:0048471;perinuclear region of cytoplasm;0.000195402861123872!GO:0051348;negative regulation of transferase activity;0.000210615219264136!GO:0030036;actin cytoskeleton organization and biogenesis;0.000213936941660981!GO:0006399;tRNA metabolic process;0.000218748935575502!GO:0006468;protein amino acid phosphorylation;0.000223307087367408!GO:0045333;cellular respiration;0.000236497699746996!GO:0051188;cofactor biosynthetic process;0.000242892483637961!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000276209513432615!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000324308966164472!GO:0004812;aminoacyl-tRNA ligase activity;0.000324308966164472!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000324308966164472!GO:0005839;proteasome core complex (sensu Eukaryota);0.000331794708703995!GO:0051168;nuclear export;0.000356244160586646!GO:0030518;steroid hormone receptor signaling pathway;0.000396631088352532!GO:0008186;RNA-dependent ATPase activity;0.000445785273808467!GO:0045893;positive regulation of transcription, DNA-dependent;0.000515299146567866!GO:0007050;cell cycle arrest;0.000548316223039994!GO:0050790;regulation of catalytic activity;0.000552695058044755!GO:0006612;protein targeting to membrane;0.000557942076707408!GO:0000278;mitotic cell cycle;0.000559686608517089!GO:0009056;catabolic process;0.000565597628361619!GO:0006891;intra-Golgi vesicle-mediated transport;0.000572213380732345!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000589087099310747!GO:0015631;tubulin binding;0.000589873213686864!GO:0006643;membrane lipid metabolic process;0.000591271533288416!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000620760909447324!GO:0043038;amino acid activation;0.000621035055274056!GO:0006418;tRNA aminoacylation for protein translation;0.000621035055274056!GO:0043039;tRNA aminoacylation;0.000621035055274056!GO:0016251;general RNA polymerase II transcription factor activity;0.00062211579510211!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000751016588511123!GO:0030658;transport vesicle membrane;0.000756317091645625!GO:0048518;positive regulation of biological process;0.000766132493956006!GO:0006401;RNA catabolic process;0.000772207881431264!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000774948606501421!GO:0005667;transcription factor complex;0.000802386445014458!GO:0009055;electron carrier activity;0.000810146884149269!GO:0008287;protein serine/threonine phosphatase complex;0.000915937458234!GO:0030659;cytoplasmic vesicle membrane;0.000922543267646396!GO:0012506;vesicle membrane;0.000931600988866176!GO:0045941;positive regulation of transcription;0.000942340647665376!GO:0006752;group transfer coenzyme metabolic process;0.000955330826416389!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000968985532224995!GO:0006352;transcription initiation;0.0010097630367098!GO:0004672;protein kinase activity;0.00101861192703554!GO:0005885;Arp2/3 protein complex;0.00102476753133314!GO:0001726;ruffle;0.00107896311927442!GO:0005774;vacuolar membrane;0.00115974464978611!GO:0004298;threonine endopeptidase activity;0.0011809856312373!GO:0009108;coenzyme biosynthetic process;0.00118104034562774!GO:0004004;ATP-dependent RNA helicase activity;0.00129752836875012!GO:0019783;small conjugating protein-specific protease activity;0.00130955799603005!GO:0031902;late endosome membrane;0.00135869804417168!GO:0004843;ubiquitin-specific protease activity;0.00156344282654276!GO:0006099;tricarboxylic acid cycle;0.00161981659535158!GO:0046356;acetyl-CoA catabolic process;0.00161981659535158!GO:0046467;membrane lipid biosynthetic process;0.00162483086958505!GO:0030522;intracellular receptor-mediated signaling pathway;0.00165105047478923!GO:0030521;androgen receptor signaling pathway;0.00166759334120425!GO:0060090;molecular adaptor activity;0.00170310162241384!GO:0031901;early endosome membrane;0.0017416606178776!GO:0004261;cathepsin G activity;0.00176756375851398!GO:0043021;ribonucleoprotein binding;0.00210310432426517!GO:0030660;Golgi-associated vesicle membrane;0.00222547254558763!GO:0030029;actin filament-based process;0.00225907168563661!GO:0008361;regulation of cell size;0.00235439066353579!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00247489804415609!GO:0030133;transport vesicle;0.00249815289469753!GO:0006818;hydrogen transport;0.00250190489126404!GO:0016044;membrane organization and biogenesis;0.00251038778311257!GO:0045792;negative regulation of cell size;0.00261159794694848!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00263711952760556!GO:0004221;ubiquitin thiolesterase activity;0.00263711952760556!GO:0046854;phosphoinositide phosphorylation;0.00263711952760556!GO:0046519;sphingoid metabolic process;0.00263711952760556!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00267173250044392!GO:0015992;proton transport;0.00276584390992006!GO:0044433;cytoplasmic vesicle part;0.0027832235977068!GO:0030308;negative regulation of cell growth;0.00281244570079402!GO:0006084;acetyl-CoA metabolic process;0.0028987313872164!GO:0005741;mitochondrial outer membrane;0.00300555523788562!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00318481286581843!GO:0008017;microtubule binding;0.00319104933534902!GO:0016049;cell growth;0.00324176479747078!GO:0017091;AU-rich element binding;0.00330167569986574!GO:0050779;RNA destabilization;0.00330167569986574!GO:0000289;poly(A) tail shortening;0.00330167569986574!GO:0008286;insulin receptor signaling pathway;0.00345214057131105!GO:0030134;ER to Golgi transport vesicle;0.00345235526404232!GO:0030127;COPII vesicle coat;0.00363409692889072!GO:0012507;ER to Golgi transport vesicle membrane;0.00363409692889072!GO:0001558;regulation of cell growth;0.00384149744529729!GO:0051252;regulation of RNA metabolic process;0.00384149744529729!GO:0044437;vacuolar part;0.00397330369636532!GO:0005099;Ras GTPase activator activity;0.00427436084173226!GO:0031072;heat shock protein binding;0.0043654720588061!GO:0030663;COPI coated vesicle membrane;0.00446754904538177!GO:0030126;COPI vesicle coat;0.00446754904538177!GO:0043407;negative regulation of MAP kinase activity;0.00449785718999951!GO:0006417;regulation of translation;0.00449793890466889!GO:0045926;negative regulation of growth;0.00456066996653959!GO:0006672;ceramide metabolic process;0.00462400529376201!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00463644571126216!GO:0042802;identical protein binding;0.00468338714597844!GO:0043488;regulation of mRNA stability;0.00471353844538661!GO:0043487;regulation of RNA stability;0.00471353844538661!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00475686791008189!GO:0015399;primary active transmembrane transporter activity;0.00475686791008189!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00493131263436829!GO:0043065;positive regulation of apoptosis;0.00505059880461343!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00505059880461343!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00505059880461343!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00505059880461343!GO:0019867;outer membrane;0.00505059880461343!GO:0045045;secretory pathway;0.00506443415690684!GO:0046474;glycerophospholipid biosynthetic process;0.00510736898502456!GO:0007034;vacuolar transport;0.00519712766357955!GO:0006261;DNA-dependent DNA replication;0.00520412492279578!GO:0048500;signal recognition particle;0.00548906346449607!GO:0035258;steroid hormone receptor binding;0.00559488478907736!GO:0005048;signal sequence binding;0.0056883348246329!GO:0031968;organelle outer membrane;0.00569310007853494!GO:0046834;lipid phosphorylation;0.00569310007853494!GO:0043623;cellular protein complex assembly;0.00589255713285804!GO:0022890;inorganic cation transmembrane transporter activity;0.00606674366852109!GO:0030041;actin filament polymerization;0.00611654151662081!GO:0016859;cis-trans isomerase activity;0.00611830643374244!GO:0032940;secretion by cell;0.00612725544584493!GO:0030118;clathrin coat;0.0062165465450252!GO:0043068;positive regulation of programmed cell death;0.00623624167368546!GO:0006950;response to stress;0.0062684011454898!GO:0016790;thiolester hydrolase activity;0.00631181745174746!GO:0019210;kinase inhibitor activity;0.00643444783140637!GO:0016311;dephosphorylation;0.00673717366174818!GO:0004860;protein kinase inhibitor activity;0.00690151920611194!GO:0006338;chromatin remodeling;0.00702305407684773!GO:0016584;nucleosome positioning;0.00703844900411334!GO:0009109;coenzyme catabolic process;0.00735462769147731!GO:0004722;protein serine/threonine phosphatase activity;0.00742655063537717!GO:0030137;COPI-coated vesicle;0.0074322437269234!GO:0006917;induction of apoptosis;0.0074405901138581!GO:0046489;phosphoinositide biosynthetic process;0.00801505039544401!GO:0046983;protein dimerization activity;0.00825325637510759!GO:0005765;lysosomal membrane;0.00835550417582708!GO:0018193;peptidyl-amino acid modification;0.00871244164171393!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00892372400691527!GO:0005070;SH3/SH2 adaptor activity;0.00919127855291789!GO:0003899;DNA-directed RNA polymerase activity;0.00930610788404021!GO:0006644;phospholipid metabolic process;0.00934503879462704!GO:0003682;chromatin binding;0.00942386893710375!GO:0003684;damaged DNA binding;0.0095644286905251!GO:0030867;rough endoplasmic reticulum membrane;0.00981224231325215!GO:0033116;ER-Golgi intermediate compartment membrane;0.00993110026624328!GO:0022406;membrane docking;0.00993110026624328!GO:0048278;vesicle docking;0.00993110026624328!GO:0031625;ubiquitin protein ligase binding;0.0100291621952977!GO:0006414;translational elongation;0.010036160009466!GO:0003746;translation elongation factor activity;0.0100834961309637!GO:0051338;regulation of transferase activity;0.010104658681068!GO:0019843;rRNA binding;0.0102772577507379!GO:0012502;induction of programmed cell death;0.0102903544964544!GO:0006904;vesicle docking during exocytosis;0.0106539261664549!GO:0035035;histone acetyltransferase binding;0.0108841174598833!GO:0005637;nuclear inner membrane;0.0109778125892605!GO:0043549;regulation of kinase activity;0.011032528790925!GO:0005874;microtubule;0.0110602409449227!GO:0033367;protein localization in mast cell secretory granule;0.0110602409449227!GO:0033365;protein localization in organelle;0.0110602409449227!GO:0033371;T cell secretory granule organization and biogenesis;0.0110602409449227!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0110602409449227!GO:0033375;protease localization in T cell secretory granule;0.0110602409449227!GO:0042629;mast cell granule;0.0110602409449227!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0110602409449227!GO:0033364;mast cell secretory granule organization and biogenesis;0.0110602409449227!GO:0033380;granzyme B localization in T cell secretory granule;0.0110602409449227!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0110602409449227!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0110602409449227!GO:0033368;protease localization in mast cell secretory granule;0.0110602409449227!GO:0033366;protein localization in secretory granule;0.0110602409449227!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0110602409449227!GO:0033374;protein localization in T cell secretory granule;0.0110602409449227!GO:0051187;cofactor catabolic process;0.0112463838483509!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0113176638356021!GO:0045047;protein targeting to ER;0.0113176638356021!GO:0031326;regulation of cellular biosynthetic process;0.0113534020607356!GO:0051329;interphase of mitotic cell cycle;0.011461101003573!GO:0030119;AP-type membrane coat adaptor complex;0.0115217437378319!GO:0043087;regulation of GTPase activity;0.0115992951348699!GO:0000118;histone deacetylase complex;0.0118134983093094!GO:0048468;cell development;0.0120327488436537!GO:0009889;regulation of biosynthetic process;0.0120929539910485!GO:0051056;regulation of small GTPase mediated signal transduction;0.012210330315143!GO:0008333;endosome to lysosome transport;0.0127971795777894!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0128031898909736!GO:0045859;regulation of protein kinase activity;0.0128825335718989!GO:0007004;telomere maintenance via telomerase;0.0132117822927453!GO:0051098;regulation of binding;0.0133841516784725!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0136075760205752!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0136556204512338!GO:0043086;negative regulation of catalytic activity;0.0139001770061791!GO:0006509;membrane protein ectodomain proteolysis;0.0143665534125944!GO:0033619;membrane protein proteolysis;0.0143665534125944!GO:0051325;interphase;0.0143665534125944!GO:0006376;mRNA splice site selection;0.0144675718366812!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0144675718366812!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0150170248639335!GO:0003711;transcription elongation regulator activity;0.0151609901561154!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0152483350244055!GO:0048487;beta-tubulin binding;0.0152833083132922!GO:0051301;cell division;0.015541455829044!GO:0001516;prostaglandin biosynthetic process;0.0155915515087945!GO:0046457;prostanoid biosynthetic process;0.0155915515087945!GO:0046966;thyroid hormone receptor binding;0.01560580340236!GO:0007040;lysosome organization and biogenesis;0.0159473781356755!GO:0005669;transcription factor TFIID complex;0.0160171974105437!GO:0040029;regulation of gene expression, epigenetic;0.0169462448038111!GO:0007266;Rho protein signal transduction;0.017044955715165!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0170493860127741!GO:0006839;mitochondrial transport;0.0171793023161389!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0176421386089949!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0176816507534236!GO:0022415;viral reproductive process;0.0177452758412463!GO:0006470;protein amino acid dephosphorylation;0.0179795105035472!GO:0009893;positive regulation of metabolic process;0.0180829257350832!GO:0006897;endocytosis;0.0182166747702375!GO:0010324;membrane invagination;0.0182166747702375!GO:0005057;receptor signaling protein activity;0.0182166747702375!GO:0022403;cell cycle phase;0.018459170839941!GO:0030258;lipid modification;0.018673796093148!GO:0005020;stem cell factor receptor activity;0.018981224452224!GO:0008250;oligosaccharyl transferase complex;0.0191446542990898!GO:0051059;NF-kappaB binding;0.0192177367617114!GO:0050811;GABA receptor binding;0.0192218031941892!GO:0040008;regulation of growth;0.0195794291580352!GO:0008092;cytoskeletal protein binding;0.0196643574632862!GO:0008312;7S RNA binding;0.0199007661783611!GO:0004576;oligosaccharyl transferase activity;0.0201694892605623!GO:0030131;clathrin adaptor complex;0.0204837217171379!GO:0009266;response to temperature stimulus;0.020802492703306!GO:0043492;ATPase activity, coupled to movement of substances;0.0208381291650383!GO:0045746;negative regulation of Notch signaling pathway;0.0210765876913495!GO:0006611;protein export from nucleus;0.0211786546038806!GO:0032200;telomere organization and biogenesis;0.0212618843648181!GO:0000723;telomere maintenance;0.0212618843648181!GO:0005942;phosphoinositide 3-kinase complex;0.0214195679384996!GO:0005095;GTPase inhibitor activity;0.0214419182192368!GO:0007041;lysosomal transport;0.0215186451796579!GO:0008632;apoptotic program;0.0219238431296312!GO:0051336;regulation of hydrolase activity;0.022219760589745!GO:0006383;transcription from RNA polymerase III promoter;0.0224166225356177!GO:0008637;apoptotic mitochondrial changes;0.0225784924769977!GO:0035004;phosphoinositide 3-kinase activity;0.0226097971258016!GO:0016303;1-phosphatidylinositol-3-kinase activity;0.0226097971258016!GO:0001727;lipid kinase activity;0.0228647462194427!GO:0006354;RNA elongation;0.0232073131849948!GO:0006405;RNA export from nucleus;0.0238330535421683!GO:0050681;androgen receptor binding;0.0239477780160009!GO:0030880;RNA polymerase complex;0.0240698199702899!GO:0030125;clathrin vesicle coat;0.0244275748870413!GO:0030665;clathrin coated vesicle membrane;0.0244275748870413!GO:0005657;replication fork;0.0244275748870413!GO:0046578;regulation of Ras protein signal transduction;0.0248527084866549!GO:0000209;protein polyubiquitination;0.0248625276397956!GO:0046822;regulation of nucleocytoplasmic transport;0.0253388504795895!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0255059935436328!GO:0005762;mitochondrial large ribosomal subunit;0.0275867461846948!GO:0000315;organellar large ribosomal subunit;0.0275867461846948!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0279669116875031!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0279669116875031!GO:0006661;phosphatidylinositol biosynthetic process;0.0283136868090309!GO:0046456;icosanoid biosynthetic process;0.0286266624599628!GO:0005791;rough endoplasmic reticulum;0.0288472697332845!GO:0005684;U2-dependent spliceosome;0.0291612521581841!GO:0008154;actin polymerization and/or depolymerization;0.0292400824612811!GO:0046488;phosphatidylinositol metabolic process;0.0297610946038883!GO:0006310;DNA recombination;0.0298929119789965!GO:0007030;Golgi organization and biogenesis;0.0299780019221183!GO:0018196;peptidyl-asparagine modification;0.0315360633677324!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0315360633677324!GO:0000188;inactivation of MAPK activity;0.0316005859649555!GO:0051087;chaperone binding;0.0316005859649555!GO:0005869;dynactin complex;0.0316176739475319!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0319881105752571!GO:0006302;double-strand break repair;0.0328605982160164!GO:0004527;exonuclease activity;0.0331286007877909!GO:0045576;mast cell activation;0.0332339938226559!GO:0006289;nucleotide-excision repair;0.0333351642489919!GO:0043414;biopolymer methylation;0.0333473633800023!GO:0008276;protein methyltransferase activity;0.0336533902240208!GO:0015980;energy derivation by oxidation of organic compounds;0.0338928208747051!GO:0046426;negative regulation of JAK-STAT cascade;0.0344823144752431!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0347957467637847!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0349964093314078!GO:0000428;DNA-directed RNA polymerase complex;0.0349964093314078!GO:0030176;integral to endoplasmic reticulum membrane;0.0352304433746984!GO:0045603;positive regulation of endothelial cell differentiation;0.035440772069445!GO:0008139;nuclear localization sequence binding;0.0361098589714096!GO:0006665;sphingolipid metabolic process;0.0365363840116469!GO:0032984;macromolecular complex disassembly;0.0370203181504358!GO:0015266;protein channel activity;0.0374526414371461!GO:0045454;cell redox homeostasis;0.0376834706250075!GO:0043022;ribosome binding;0.0379570963418219!GO:0051920;peroxiredoxin activity;0.0384652761968612!GO:0047485;protein N-terminus binding;0.0390655934316239!GO:0000059;protein import into nucleus, docking;0.0391747396657497!GO:0030149;sphingolipid catabolic process;0.0392604529787757!GO:0004721;phosphoprotein phosphatase activity;0.0393757264286347!GO:0030027;lamellipodium;0.0395779295564897!GO:0016601;Rac protein signal transduction;0.039917459216801!GO:0006013;mannose metabolic process;0.0404139267157269!GO:0007033;vacuole organization and biogenesis;0.0407717782140725!GO:0031647;regulation of protein stability;0.0409775604086382!GO:0015923;mannosidase activity;0.0415436694782161!GO:0030271;chymase activity;0.0417952280851771!GO:0016791;phosphoric monoester hydrolase activity;0.0421634690827078!GO:0045947;negative regulation of translational initiation;0.0421634690827078!GO:0000082;G1/S transition of mitotic cell cycle;0.0423152908258526!GO:0030503;regulation of cell redox homeostasis;0.0423644812003723!GO:0006892;post-Golgi vesicle-mediated transport;0.0423688889504341!GO:0009117;nucleotide metabolic process;0.0425940300630749!GO:0032507;maintenance of cellular protein localization;0.0432020614861922!GO:0019377;glycolipid catabolic process;0.0434257356318266!GO:0016279;protein-lysine N-methyltransferase activity;0.0435964420330192!GO:0018024;histone-lysine N-methyltransferase activity;0.0435964420330192!GO:0016278;lysine N-methyltransferase activity;0.0435964420330192!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0435964420330192!GO:0005484;SNAP receptor activity;0.0437054341571094!GO:0030218;erythrocyte differentiation;0.0448134210445597!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0454767555945683!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0454767555945683!GO:0042147;retrograde transport, endosome to Golgi;0.045625977396991!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.04569530413448!GO:0043681;protein import into mitochondrion;0.0457674674994933!GO:0008629;induction of apoptosis by intracellular signals;0.0459395188211966!GO:0051219;phosphoprotein binding;0.0460644412378989!GO:0005801;cis-Golgi network;0.0463822855004891!GO:0006984;ER-nuclear signaling pathway;0.046397599979387!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0463995674460026!GO:0008601;protein phosphatase type 2A regulator activity;0.0464174335563316!GO:0051235;maintenance of localization;0.0465615121393538!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0466524322796223!GO:0045637;regulation of myeloid cell differentiation;0.0470053744385367!GO:0000119;mediator complex;0.0472732548545932!GO:0005085;guanyl-nucleotide exchange factor activity;0.0475764594371445!GO:0000781;chromosome, telomeric region;0.0475973670458875!GO:0030140;trans-Golgi network transport vesicle;0.047756867595426!GO:0006626;protein targeting to mitochondrion;0.0482626050948832!GO:0005955;calcineurin complex;0.0482626050948832!GO:0048146;positive regulation of fibroblast proliferation;0.048415622094777!GO:0016585;chromatin remodeling complex;0.0496234121075887 | |||
|sample_id=11566 | |sample_id=11566 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=skin | |sample_tissue=skin | ||
|top_motifs=ATF4:3.10607667868;CREB1:2.67714808131;GATA6:2.49634917986;AR:2.15266924992;ATF5_CREB3:2.12133485218;FOX{I1,J2}:2.08435497079;NFKB1_REL_RELA:2.08170994721;RFX1:2.08140036543;PAX2:2.01025250652;FOX{D1,D2}:1.95777212704;STAT1,3:1.95008124302;FOXN1:1.79799622167;PPARG:1.7666408519;RFX2..5_RFXANK_RFXAP:1.722379697;EP300:1.69285299017;EGR1..3:1.60442418716;HIF1A:1.58114351031;DMAP1_NCOR{1,2}_SMARC:1.49178341069;HSF1,2:1.48291260797;TFAP2{A,C}:1.4795961718;SREBF1,2:1.47463231262;PATZ1:1.4032714707;ATF2:1.35988674305;JUN:1.33653201393;RUNX1..3:1.3240648485;CDX1,2,4:1.31353880274;SPIB:1.29397164893;MAFB:1.28082204488;ELF1,2,4:1.23174443196;BPTF:1.22615395311;SPI1:1.12799579306;SP1:1.11259024971;HBP1_HMGB_SSRP1_UBTF:1.10092692369;TGIF1:1.07962683043;TLX2:1.03375651575;FOX{F1,F2,J1}:1.02694063461;NHLH1,2:0.921826205603;RXRA_VDR{dimer}:0.920809801267;CRX:0.908411004423;ESR1:0.867607737211;IKZF2:0.851454952148;ETS1,2:0.851433693211;DBP:0.831365708982;XBP1:0.77392399701;FOS_FOS{B,L1}_JUN{B,D}:0.747670987994;MYB:0.733240068607;MAZ:0.702873255289;ZFP161:0.694096836413;NFIL3:0.69040146451;HOXA9_MEIS1:0.687744443322;FOSL2:0.680645744957;ESRRA:0.637408797779;ATF6:0.633597391035;NANOG{mouse}:0.623098891784;TFAP4:0.622687444335;MEF2{A,B,C,D}:0.61063713944;BREu{core}:0.554034233627;ZNF238:0.552019189751;BACH2:0.530268315001;EBF1:0.485820087485;NFE2:0.481609393031;ALX1:0.400217230747;NFE2L1:0.398850597344;NFATC1..3:0.369315479924;MYFfamily:0.350605794021;RXR{A,B,G}:0.323089609324;SMAD1..7,9:0.319167097469;SOX2:0.286050529673;TFCP2:0.28070707828;FOXP1:0.262806457186;NR6A1:0.242718401842;HOX{A6,A7,B6,B7}:0.24086644074;PAX6:0.236803842287;SPZ1:0.228773779817;POU2F1..3:0.216124098532;PBX1:0.215837484344;ZNF148:0.159840496583;STAT2,4,6:0.153822594953;TFAP2B:0.11605781876;SOX5:0.094472869924;PAX1,9:0.06013378576;SRF:0.0195992406439;NKX6-1,2:0.00548310600246;HIC1:-0.0171695645982;bHLH_family:-0.0204888299082;HMX1:-0.0238149300702;MTF1:-0.0269939284203;FOXO1,3,4:-0.0303633724296;TBP:-0.0358521327643;HES1:-0.0404598852882;NKX3-2:-0.0686550019054;VSX1,2:-0.0720533419964;MED-1{core}:-0.0762653124429;MTE{core}:-0.0813443046456;ZIC1..3:-0.0918527975181;MZF1:-0.100464992132;TBX4,5:-0.124677062386;GLI1..3:-0.137674819994;CUX2:-0.137969533603;ELK1,4_GABP{A,B1}:-0.1527984713;NFY{A,B,C}:-0.154998844271;NFE2L2:-0.18387471407;TOPORS:-0.190756193064;T:-0.205167811698;PAX5:-0.211921551228;TAL1_TCF{3,4,12}:-0.220406724418;REST:-0.220610122714;GTF2I:-0.263525228106;NRF1:-0.273049394081;IRF1,2:-0.27394618235;ZBTB6:-0.280949839526;FOXL1:-0.28919931951;XCPE1{core}:-0.298717798321;PITX1..3:-0.342650204579;PAX3,7:-0.34291846988;RORA:-0.349669351597;GZF1:-0.352063680863;HNF4A_NR2F1,2:-0.362780355752;STAT5{A,B}:-0.371767521124;EVI1:-0.37592388161;HLF:-0.376145559177;EN1,2:-0.389033650942;ZNF423:-0.391933955849;RREB1:-0.403975934078;FOXM1:-0.422965334099;ZNF143:-0.437259107581;POU6F1:-0.450502964594;AHR_ARNT_ARNT2:-0.451974451367;PAX4:-0.45217353312;TLX1..3_NFIC{dimer}:-0.471559517966;E2F1..5:-0.501051239087;SOX{8,9,10}:-0.513766075677;ARID5B:-0.544250709502;HOX{A5,B5}:-0.555363941153;PRRX1,2:-0.560471993246;CEBPA,B_DDIT3:-0.584565105536;HNF1A:-0.600131394549;TFDP1:-0.603825881433;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.608035316757;ZNF384:-0.610238847521;ZBTB16:-0.619849902316;IKZF1:-0.643037108349;NKX2-1,4:-0.671360320548;LHX3,4:-0.680503483351;FOXP3:-0.68753591185;TEAD1:-0.728389133204;YY1:-0.735296186729;HAND1,2:-0.740946840141;POU1F1:-0.757157495953;FOXQ1:-0.763826789204;ZEB1:-0.775066191531;NKX2-3_NKX2-5:-0.826626596601;NKX3-1:-0.839875346825;LEF1_TCF7_TCF7L1,2:-0.85891424372;GATA4:-0.866857678229;AIRE:-0.870439695551;TP53:-0.882708892451;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.890182584423;SNAI1..3:-0.928500159424;FOXD3:-0.932857806919;NR3C1:-0.938061610148;GTF2A1,2:-0.958178655054;PRDM1:-0.968989674501;SOX17:-0.973569899879;PAX8:-1.03564109098;NFIX:-1.04874980798;RBPJ:-1.05054057496;NANOG:-1.07459656017;NKX2-2,8:-1.12827146451;NR5A1,2:-1.14830243033;IRF7:-1.22753522628;ONECUT1,2:-1.2295729705;OCT4_SOX2{dimer}:-1.24102896954;UFEwm:-1.30191167038;POU5F1:-1.36091088293;MYOD1:-1.36240045845;GFI1:-1.40542352586;HOX{A4,D4}:-1.40979240335;HMGA1,2:-1.45937142733;MYBL2:-1.53164808574;FOXA2:-1.57135044217;NR1H4:-1.73071079654;GFI1B:-1.874153023;ALX4:-2.1031140199;TEF:-2.10506517716;ADNP_IRX_SIX_ZHX:-2.12241040844;KLF4:-2.1900278024;CDC5L:-2.23136010439;LMO2:-2.26167030539;GCM1,2:-2.33037416272;POU3F1..4:-2.59679556694;PDX1:-2.65255606628 | |top_motifs=ATF4:3.10607667868;CREB1:2.67714808131;GATA6:2.49634917986;AR:2.15266924992;ATF5_CREB3:2.12133485218;FOX{I1,J2}:2.08435497079;NFKB1_REL_RELA:2.08170994721;RFX1:2.08140036543;PAX2:2.01025250652;FOX{D1,D2}:1.95777212704;STAT1,3:1.95008124302;FOXN1:1.79799622167;PPARG:1.7666408519;RFX2..5_RFXANK_RFXAP:1.722379697;EP300:1.69285299017;EGR1..3:1.60442418716;HIF1A:1.58114351031;DMAP1_NCOR{1,2}_SMARC:1.49178341069;HSF1,2:1.48291260797;TFAP2{A,C}:1.4795961718;SREBF1,2:1.47463231262;PATZ1:1.4032714707;ATF2:1.35988674305;JUN:1.33653201393;RUNX1..3:1.3240648485;CDX1,2,4:1.31353880274;SPIB:1.29397164893;MAFB:1.28082204488;ELF1,2,4:1.23174443196;BPTF:1.22615395311;SPI1:1.12799579306;SP1:1.11259024971;HBP1_HMGB_SSRP1_UBTF:1.10092692369;TGIF1:1.07962683043;TLX2:1.03375651575;FOX{F1,F2,J1}:1.02694063461;NHLH1,2:0.921826205603;RXRA_VDR{dimer}:0.920809801267;CRX:0.908411004423;ESR1:0.867607737211;IKZF2:0.851454952148;ETS1,2:0.851433693211;DBP:0.831365708982;XBP1:0.77392399701;FOS_FOS{B,L1}_JUN{B,D}:0.747670987994;MYB:0.733240068607;MAZ:0.702873255289;ZFP161:0.694096836413;NFIL3:0.69040146451;HOXA9_MEIS1:0.687744443322;FOSL2:0.680645744957;ESRRA:0.637408797779;ATF6:0.633597391035;NANOG{mouse}:0.623098891784;TFAP4:0.622687444335;MEF2{A,B,C,D}:0.61063713944;BREu{core}:0.554034233627;ZNF238:0.552019189751;BACH2:0.530268315001;EBF1:0.485820087485;NFE2:0.481609393031;ALX1:0.400217230747;NFE2L1:0.398850597344;NFATC1..3:0.369315479924;MYFfamily:0.350605794021;RXR{A,B,G}:0.323089609324;SMAD1..7,9:0.319167097469;SOX2:0.286050529673;TFCP2:0.28070707828;FOXP1:0.262806457186;NR6A1:0.242718401842;HOX{A6,A7,B6,B7}:0.24086644074;PAX6:0.236803842287;SPZ1:0.228773779817;POU2F1..3:0.216124098532;PBX1:0.215837484344;ZNF148:0.159840496583;STAT2,4,6:0.153822594953;TFAP2B:0.11605781876;SOX5:0.094472869924;PAX1,9:0.06013378576;SRF:0.0195992406439;NKX6-1,2:0.00548310600246;HIC1:-0.0171695645982;bHLH_family:-0.0204888299082;HMX1:-0.0238149300702;MTF1:-0.0269939284203;FOXO1,3,4:-0.0303633724296;TBP:-0.0358521327643;HES1:-0.0404598852882;NKX3-2:-0.0686550019054;VSX1,2:-0.0720533419964;MED-1{core}:-0.0762653124429;MTE{core}:-0.0813443046456;ZIC1..3:-0.0918527975181;MZF1:-0.100464992132;TBX4,5:-0.124677062386;GLI1..3:-0.137674819994;CUX2:-0.137969533603;ELK1,4_GABP{A,B1}:-0.1527984713;NFY{A,B,C}:-0.154998844271;NFE2L2:-0.18387471407;TOPORS:-0.190756193064;T:-0.205167811698;PAX5:-0.211921551228;TAL1_TCF{3,4,12}:-0.220406724418;REST:-0.220610122714;GTF2I:-0.263525228106;NRF1:-0.273049394081;IRF1,2:-0.27394618235;ZBTB6:-0.280949839526;FOXL1:-0.28919931951;XCPE1{core}:-0.298717798321;PITX1..3:-0.342650204579;PAX3,7:-0.34291846988;RORA:-0.349669351597;GZF1:-0.352063680863;HNF4A_NR2F1,2:-0.362780355752;STAT5{A,B}:-0.371767521124;EVI1:-0.37592388161;HLF:-0.376145559177;EN1,2:-0.389033650942;ZNF423:-0.391933955849;RREB1:-0.403975934078;FOXM1:-0.422965334099;ZNF143:-0.437259107581;POU6F1:-0.450502964594;AHR_ARNT_ARNT2:-0.451974451367;PAX4:-0.45217353312;TLX1..3_NFIC{dimer}:-0.471559517966;E2F1..5:-0.501051239087;SOX{8,9,10}:-0.513766075677;ARID5B:-0.544250709502;HOX{A5,B5}:-0.555363941153;PRRX1,2:-0.560471993246;CEBPA,B_DDIT3:-0.584565105536;HNF1A:-0.600131394549;TFDP1:-0.603825881433;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.608035316757;ZNF384:-0.610238847521;ZBTB16:-0.619849902316;IKZF1:-0.643037108349;NKX2-1,4:-0.671360320548;LHX3,4:-0.680503483351;FOXP3:-0.68753591185;TEAD1:-0.728389133204;YY1:-0.735296186729;HAND1,2:-0.740946840141;POU1F1:-0.757157495953;FOXQ1:-0.763826789204;ZEB1:-0.775066191531;NKX2-3_NKX2-5:-0.826626596601;NKX3-1:-0.839875346825;LEF1_TCF7_TCF7L1,2:-0.85891424372;GATA4:-0.866857678229;AIRE:-0.870439695551;TP53:-0.882708892451;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.890182584423;SNAI1..3:-0.928500159424;FOXD3:-0.932857806919;NR3C1:-0.938061610148;GTF2A1,2:-0.958178655054;PRDM1:-0.968989674501;SOX17:-0.973569899879;PAX8:-1.03564109098;NFIX:-1.04874980798;RBPJ:-1.05054057496;NANOG:-1.07459656017;NKX2-2,8:-1.12827146451;NR5A1,2:-1.14830243033;IRF7:-1.22753522628;ONECUT1,2:-1.2295729705;OCT4_SOX2{dimer}:-1.24102896954;UFEwm:-1.30191167038;POU5F1:-1.36091088293;MYOD1:-1.36240045845;GFI1:-1.40542352586;HOX{A4,D4}:-1.40979240335;HMGA1,2:-1.45937142733;MYBL2:-1.53164808574;FOXA2:-1.57135044217;NR1H4:-1.73071079654;GFI1B:-1.874153023;ALX4:-2.1031140199;TEF:-2.10506517716;ADNP_IRX_SIX_ZHX:-2.12241040844;KLF4:-2.1900278024;CDC5L:-2.23136010439;LMO2:-2.26167030539;GCM1,2:-2.33037416272;POU3F1..4:-2.59679556694;PDX1:-2.65255606628 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11566-120D9;search_select_hide=table117:FF:11566-120D9 | |||
}} | }} | ||
Latest revision as of 18:09, 4 June 2020
| Name: | Mast cell, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12593 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12593
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12593
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0849 |
| 10 | 10 | 0.344 |
| 100 | 100 | 0.241 |
| 101 | 101 | 0.753 |
| 102 | 102 | 0.835 |
| 103 | 103 | 0.319 |
| 104 | 104 | 0.923 |
| 105 | 105 | 0.618 |
| 106 | 106 | 0.797 |
| 107 | 107 | 0.0173 |
| 108 | 108 | 0.108 |
| 109 | 109 | 0.855 |
| 11 | 11 | 0.299 |
| 110 | 110 | 0.146 |
| 111 | 111 | 0.144 |
| 112 | 112 | 0.92 |
| 113 | 113 | 0.65 |
| 114 | 114 | 0.0869 |
| 115 | 115 | 0.811 |
| 116 | 116 | 0.17 |
| 117 | 117 | 0.0829 |
| 118 | 118 | 0.3 |
| 119 | 119 | 0.0981 |
| 12 | 12 | 0.602 |
| 120 | 120 | 0.254 |
| 121 | 121 | 0.284 |
| 122 | 122 | 0.506 |
| 123 | 123 | 0.514 |
| 124 | 124 | 0.0565 |
| 125 | 125 | 0.273 |
| 126 | 126 | 0.637 |
| 127 | 127 | 0.601 |
| 128 | 128 | 0.749 |
| 129 | 129 | 0.0022 |
| 13 | 13 | 0.739 |
| 130 | 130 | 0.447 |
| 131 | 131 | 0.696 |
| 132 | 132 | 0.151 |
| 133 | 133 | 0.0599 |
| 134 | 134 | 0.426 |
| 135 | 135 | 0.683 |
| 136 | 136 | 0.0422 |
| 137 | 137 | 0.0396 |
| 138 | 138 | 0.287 |
| 139 | 139 | 0.67 |
| 14 | 14 | 0.805 |
| 140 | 140 | 0.182 |
| 141 | 141 | 0.175 |
| 142 | 142 | 0.0351 |
| 143 | 143 | 0.729 |
| 144 | 144 | 0.874 |
| 145 | 145 | 0.593 |
| 146 | 146 | 0.325 |
| 147 | 147 | 0.137 |
| 148 | 148 | 0.695 |
| 149 | 149 | 0.0896 |
| 15 | 15 | 0.474 |
| 150 | 150 | 0.939 |
| 151 | 151 | 0.393 |
| 152 | 152 | 0.101 |
| 153 | 153 | 0.665 |
| 154 | 154 | 0.709 |
| 155 | 155 | 0.204 |
| 156 | 156 | 0.705 |
| 157 | 157 | 0.512 |
| 158 | 158 | 0.507 |
| 159 | 159 | 0.289 |
| 16 | 16 | 0.199 |
| 160 | 160 | 0.0508 |
| 161 | 161 | 0.349 |
| 162 | 162 | 0.147 |
| 163 | 163 | 0.358 |
| 164 | 164 | 0.412 |
| 165 | 165 | 0.918 |
| 166 | 166 | 0.0362 |
| 167 | 167 | 0.328 |
| 168 | 168 | 0.179 |
| 169 | 169 | 0.352 |
| 17 | 17 | 0.411 |
| 18 | 18 | 0.144 |
| 19 | 19 | 0.306 |
| 2 | 2 | 0.106 |
| 20 | 20 | 0.43 |
| 21 | 21 | 0.559 |
| 22 | 22 | 0.931 |
| 23 | 23 | 0.842 |
| 24 | 24 | 0.647 |
| 25 | 25 | 0.855 |
| 26 | 26 | 0.303 |
| 27 | 27 | 0.248 |
| 28 | 28 | 0.626 |
| 29 | 29 | 0.427 |
| 3 | 3 | 0.317 |
| 30 | 30 | 0.477 |
| 31 | 31 | 0.34 |
| 32 | 32 | 0.00338 |
| 33 | 33 | 0.801 |
| 34 | 34 | 0.646 |
| 35 | 35 | 0.144 |
| 36 | 36 | 0.705 |
| 37 | 37 | 0.804 |
| 38 | 38 | 0.638 |
| 39 | 39 | 0.574 |
| 4 | 4 | 0.412 |
| 40 | 40 | 0.41 |
| 41 | 41 | 0.985 |
| 42 | 42 | 0.294 |
| 43 | 43 | 0.454 |
| 44 | 44 | 0.046 |
| 45 | 45 | 0.579 |
| 46 | 46 | 0.249 |
| 47 | 47 | 0.209 |
| 48 | 48 | 0.164 |
| 49 | 49 | 0.422 |
| 5 | 5 | 0.728 |
| 50 | 50 | 0.926 |
| 51 | 51 | 0.859 |
| 52 | 52 | 0.883 |
| 53 | 53 | 0.953 |
| 54 | 54 | 0.809 |
| 55 | 55 | 0.584 |
| 56 | 56 | 0.483 |
| 57 | 57 | 0.0871 |
| 58 | 58 | 0.79 |
| 59 | 59 | 0.666 |
| 6 | 6 | 0.78 |
| 60 | 60 | 0.818 |
| 61 | 61 | 0.56 |
| 62 | 62 | 0.749 |
| 63 | 63 | 0.246 |
| 64 | 64 | 0.356 |
| 65 | 65 | 0.339 |
| 66 | 66 | 0.766 |
| 67 | 67 | 0.229 |
| 68 | 68 | 0.521 |
| 69 | 69 | 0.164 |
| 7 | 7 | 0.769 |
| 70 | 70 | 0.383 |
| 71 | 71 | 0.389 |
| 72 | 72 | 0.416 |
| 73 | 73 | 0.402 |
| 74 | 74 | 0.00818 |
| 75 | 75 | 0.98 |
| 76 | 76 | 0.758 |
| 77 | 77 | 0.0512 |
| 78 | 78 | 0.449 |
| 79 | 79 | 0.294 |
| 8 | 8 | 0.0701 |
| 80 | 80 | 0.45 |
| 81 | 81 | 0.308 |
| 82 | 82 | 0.924 |
| 83 | 83 | 0.773 |
| 84 | 84 | 0.342 |
| 85 | 85 | 0.632 |
| 86 | 86 | 0.0642 |
| 87 | 87 | 0.332 |
| 88 | 88 | 0.446 |
| 89 | 89 | 0.0109 |
| 9 | 9 | 0.728 |
| 90 | 90 | 0.614 |
| 91 | 91 | 0.878 |
| 92 | 92 | 0.346 |
| 93 | 93 | 0.252 |
| 94 | 94 | 0.695 |
| 95 | 95 | 0.0629 |
| 96 | 96 | 0.301 |
| 97 | 97 | 0.717 |
| 98 | 98 | 0.414 |
| 99 | 99 | 1.14993e-4 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12593
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0000261 mast cell- heparinase treated sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0000151 (secretory cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0002274 (histamine secreting cell)
0000219 (motile cell)
0000163 (endocrine cell)
0000457 (biogenic amine secreting cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000097 (mast cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000260 (mast cell sample)
0000261 (mast cell- heparinase treated sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
