FF:11532-120A2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005165 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005165 | ||
|accession_numbers=CAGE;DRX008519;DRR009391;DRZ000816;DRZ002201;DRZ012166;DRZ013551 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037123;DRR041489;DRZ007131 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000020,UBERON:0002203,UBERON:0001768,UBERON:0001032,UBERON:0002049,UBERON:0002200,UBERON:0006876,UBERON:0010317,UBERON:0007798,UBERON:0005969,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0004535,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0010230,UBERON:0001009,UBERON:0003956 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0002367 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000188 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.01!102.08!TCF21;;chr9:132427883..132427951,+!p2@PRRX2!1.87!72.86!PRRX2;;chr16:86544113..86544145,+!p1@FOXF1!1.86!87.28!FOXF1;;chr6:34204921..34204939,+!p3@HMGA1!1.82!1811.98!HMGA1;;chr7:19157248..19157268,-!p1@TWIST1!1.67!121.43!TWIST1;;chr9:132427972..132428056,+!p1@PRRX2!1.60!50.09!PRRX2;;chr4:111544219..111544240,-!p1@PITX2!1.56!35.67!PITX2;;chr5:2751762..2751784,-!p1@IRX2!1.50!30.74!IRX2;;chr6:50786591..50786614,+!p1@TFAP2B!1.50!30.36!TFAP2B;;chr2:239756671..239756732,+!p1@TWIST2!1.48!91.07!TWIST2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.47!28.84!POU3F3;;chr2:239756739..239756755,+!p2@TWIST2!1.44!45.16!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!1.43!68.68!HMGA2;;chr3:128206762..128206781,-!p2@GATA2!1.34!125.61!GATA2;;chr11:46299199..46299233,+!p1@CREB3L1!1.34!103.98!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.30!25.42!PRRX1;;chr3:128212033..128212051,-!p1@GATA2!1.29!18.59!GATA2;;chr19:46801639..46801699,+!p1@HIF3A!1.27!17.46!HIF3A;;chr4:111558135..111558198,-!p2@PITX2!1.26!17.08!PITX2;;chr9:129376201..129376225,+!p1@LMX1B!1.24!16.32!LMX1B;;chr9:129376233..129376251,+!p2@LMX1B!1.21!15.18!LMX1B;;chr20:42543441..42543497,+!p1@TOX2!1.17!61.10!TOX2;;chr17:41622925..41622976,-!p3@ETV4!1.17!20.87!ETV4;;chr1:170632285..170632309,+!p1@PRRX1!1.17!15.56!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!1.15!287.26!AEBP1;;chr11:46299539..46299620,+!p2@CREB3L1!1.15!22.39!CREB3L1;;chr17:41622765..41622821,-!p2@ETV4!1.14!19.73!ETV4;;chr20:55204351..55204377,+!p1@TFAP2C!1.14!16.32!TFAP2C;;chr6:1389789..1389821,+!p1@FOXF2!1.13!17.08!FOXF2;;chr14:74256787..74256858,-!p6@C14orf43!1.13!12.52!C14orf43;;chr17:41623009..41623053,-!p4@ETV4!1.10!18.59!ETV4;;chr6:85474299..85474324,-!p1@TBX18!1.09!20.11!TBX18;;chr17:41623692..41623715,-!p1@ETV4!1.08!47.05!ETV4;;chr19:45260775..45260838,+!p5@BCL3!1.08!14.42!BCL3;;chr2:5832508..5832524,+!p1@SOX11!1.07!10.63!SOX11;;chr17:59477233..59477263,+!p1@TBX2!1.06!33.01!TBX2;;chr15:57511609..57511651,+!p2@TCF12!1.05!17.46!TCF12;;chr5:3595977..3595999,+!p1@IRX1!1.05!10.25!IRX1;;chr16:86600426..86600441,+!p1@FOXC2!1.02!23.53!FOXC2;;chr20:42543506..42543549,+!p2@TOX2!1.02!23.15!TOX2;;chr17:41622731..41622764,-!p5@ETV4!1.02!9.49!ETV4;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.02!9.49!POU3F3;;chr12:2986206..2986258,-!p2@FOXM1!1.00!55.02!FOXM1;;chr3:138665937..138665968,-!p1@FOXL2!1.00!9.11!FOXL2;;chr4:111544254..111544270,-!p3@PITX2!1.00!9.11!PITX2;;chr14:61116183..61116208,-!p1@SIX1!0.99!33.77!SIX1;;chr6:10412600..10412637,-!p1@TFAP2A!0.97!14.04!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!0.95!37.57!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!0.95!15.56!HMGA2;;chr18:52969674..52969685,-!p24@TCF4!0.95!7.97!TCF4;;chr6:85473156..85473210,-!p2@TBX18!0.94!9.49!TBX18;;chr17:41622834..41622883,-!p6@ETV4!0.93!9.11!ETV4;;chr18:52969844..52969895,-!p27@TCF4!0.93!7.59!TCF4;;chr5:3595934..3595957,+!p2@IRX1!0.93!7.59!IRX1;;chr12:2986275..2986363,-!p1@FOXM1!0.91!74.00!FOXM1;;chr12:66218212..66218244,+!p5@HMGA2!0.91!10.63!HMGA2;;chr19:38720294..38720348,-!p1@DPF1!0.91!9.11!DPF1;;chr5:92918919..92918942,+!p1@NR2F1!0.90!32.26!NR2F1;;chr20:42295713..42295738,+!p2@MYBL2!0.89!41.74!MYBL2;;chr11:47279504..47279563,+!p1@NR1H3!0.89!15.94!NR1H3;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.89!7.21!GLIS1;;chr4:299227..299272,-!p1@ZNF732!0.89!6.83!ZNF732;;chr5:2751785..2751808,-!p2@IRX2!0.89!6.83!IRX2;;chr6:34204973..34204990,+!p4@HMGA1!0.88!93.35!HMGA1;;chr2:19558373..19558392,-!p1@OSR1!0.88!18.59!OSR1;;chr6:1312325..1312340,+!p1@FOXQ1!0.88!11.00!FOXQ1;;chr6:50786571..50786590,+!p2@TFAP2B!0.87!6.45!TFAP2B;;chr8:60031809..60031835,-!p4@TOX!0.85!7.97!TOX;;chr17:41623075..41623101,-!p9@ETV4!0.85!7.21!ETV4;;chr15:67418119..67418162,+!p5@SMAD3!0.85!6.83!SMAD3;;chr12:85673977..85674015,+!p1@ALX1!0.85!6.07!ALX1;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!0.85!6.07!POU3F3;;chr20:42295745..42295765,+!p1@MYBL2!0.83!100.18!MYBL2;;chr17:59477197..59477212,+!p2@TBX2!0.83!10.25!TBX2;;chr5:3595961..3595975,+!p3@IRX1!0.83!5.69!IRX1;;chr7:19157043..19157088,-!p2@TWIST1!0.82!14.80!TWIST1;;chr16:54964740..54964789,+!p1@IRX5!0.82!8.35!IRX5;;chr11:113930425..113930471,+!p1@ZBTB16!0.82!8.35!ZBTB16;;chr6:31126291..31126399,+!p1@TCF19!0.81!55.40!TCF19;;chr2:121493425..121493474,+!p1@GLI2!0.81!12.52!GLI2;;chr12:53614115..53614154,-!p1@RARG!0.80!30.74!RARG;;chr11:63684602..63684664,-!p1@RCOR2!0.80!11.00!RCOR2;;chr16:54964899..54964914,+!p2@IRX5!0.80!5.31!IRX5;;chr17:17726907..17726958,-!p2@SREBF1!0.79!34.53!SREBF1;;chr11:65686952..65686975,+!p5@DRAP1!0.79!31.12!DRAP1;;chr1:164528445..164528459,+!p2@PBX1!0.79!17.46!PBX1;;chr7:44143978..44143989,+!p2@AEBP1!0.79!9.87!AEBP1;;chr4:4861385..4861398,+!p1@MSX1!0.78!15.94!MSX1;;chr5:134369905..134369972,-!p1@PITX1!0.78!7.97!PITX1;;chr3:185826855..185826911,-!p1@ETV5!0.77!148.75!ETV5;;chr1:8483878..8483907,-!p4@RERE!0.77!20.49!RERE;;chr12:66218378..66218401,+!p6@HMGA2!0.77!7.97!HMGA2;;chr10:119302232..119302265,+!p1@EMX2!0.77!4.93!EMX2;;chr1:170632250..170632277,+!p7@PRRX1!0.77!4.93!PRRX1;;chr17:41622982..41623001,-!p11@ETV4!0.77!4.93!ETV4;;chr8:60031619..60031676,-!p1@TOX!0.76!11.00!TOX;;chr12:66218443..66218461,+!p8@HMGA2!0.75!6.07!HMGA2;;chr5:92919068..92919082,+!p5@NR2F1!0.75!5.69!NR2F1;;chr11:46299186..46299195,+!p3@CREB3L1!0.75!5.31!CREB3L1;;chr11:65667846..65667868,-!p1@FOSL1!0.74!133.57!FOSL1;;chr3:12329397..12329433,+!p2@PPARG!0.74!11.00!PPARG;;chr5:134369879..134369898,-!p2@PITX1!0.74!4.55!PITX1;;chr6:34204672..34204692,+!p1@HMGA1!0.73!559.34!HMGA1;;chr17:70117153..70117174,+!p1@SOX9!0.73!50.85!SOX9;;chr17:1959369..1959388,+!p2@HIC1!0.73!12.52!HIC1;;chr16:73093174..73093209,-!p3@ZFHX3!0.73!6.07!ZFHX3;;chr12:66218836..66218888,+!p1@HMGA2!0.72!44.40!HMGA2;;chr19:49865646..49865718,-!p1@TEAD2!0.72!40.60!TEAD2;;chr5:176738887..176738934,-!p1@MXD3!0.72!31.88!MXD3;;chr3:12329358..12329393,+!p3@PPARG!0.72!11.38!PPARG;;chr6:10415276..10415341,-!p2@TFAP2A!0.72!5.31!TFAP2A;;chr15:83953397..83953425,-!p1@BNC1!0.72!4.93!BNC1;;chr1:170633262..170633285,+!p3@PRRX1!0.72!4.93!PRRX1;;chr12:66218152..66218174,+!p10@HMGA2!0.72!4.55!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.71!38.71!TBX3;;chr12:7079780..7079791,-!p2@PHB2!0.71!23.91!PHB2;;chr11:65667884..65667895,-!p2@FOSL1!0.71!17.84!FOSL1;;chr7:42276822..42276895,-!p2@GLI3!0.71!13.66!GLI3;;chr8:60031934..60031986,-!p6@TOX!0.71!4.17!TOX;;chr10:119302508..119302559,+!p5@EMX2!0.71!4.17!EMX2;;chr15:67418177..67418204,+!p9@SMAD3!0.71!4.17!SMAD3;;chr16:86600870..86600921,+!p2@FOXC2!0.71!4.17!FOXC2;;chr5:321810..321877,+!p1@AHRR!0.70!14.04!AHRR;;chr14:21994337..21994442,-!p1@SALL2!0.70!12.14!SALL2;;chr15:67418047..67418093,+!p4@SMAD3!0.70!5.31!SMAD3;;chr9:102584262..102584276,+!p1@NR4A3!0.69!9.49!NR4A3;;chr1:23857698..23857733,-!p1@E2F2!0.69!7.59!E2F2;;chrX:66763815..66763854,+!p2@AR!0.69!5.31!AR;;chr12:66218003..66218018,+!p9@HMGA2!0.69!4.93!HMGA2;;chr19:1592714..1592762,-!p1@MBD3!0.68!32.63!MBD3;;chr17:59477275..59477286,+!p3@TBX2!0.68!5.31!TBX2;;chr2:96012397..96012417,+!p3@KCNIP3!0.68!3.79!KCNIP3;;chr11:46299443..46299459,+!p4@CREB3L1!0.68!3.79!CREB3L1;;chr8:93074803..93074845,-!p1@RUNX1T1!0.68!3.79!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.68!3.79!RUNX1T1;;chr19:6424783..6424802,-!p2@KHSRP!0.67!86.90!KHSRP;;chr8:60031682..60031710,-!p2@TOX!0.67!6.45!TOX;;chr17:42295777..42295816,-!p7@UBTF!0.67!4.55!UBTF;;chr19:3366570..3366619,+!p1@NFIC!0.66!133.57!NFIC;;chr6:1610293..1610310,+!p1@FOXC1!0.66!6.45!FOXC1;;chr20:50721803..50721857,-!p2@ZFP64!0.66!6.07!ZFP64;;chr3:52001448..52001478,-!p2@PCBP4!0.65!56.92!PCBP4;;chr1:151032860..151032918,+!p1@MLLT11!0.65!47.81!MLLT11;;chr19:13134772..13134822,+!p2@NFIX!0.64!5.31!NFIX;;chr19:50542543..50542548,+!p2@ZNF473!0.64!3.42!ZNF473;;chr1:110613238..110613272,-!p1@ALX3!0.64!3.42!ALX3;;chr6:50786479..50786490,+!p6@TFAP2B!0.64!3.42!TFAP2B;;chr4:111558118..111558133,-!p5@PITX2!0.64!3.42!PITX2;;chr11:44331576..44331650,-!p1@ALX4!0.64!3.42!ALX4;;chr9:102584159..102584174,+!p2@NR4A3!0.63!6.45!NR4A3;;chr17:1958388..1958404,+!p1@HIC1!0.62!23.91!HIC1;;chr12:53625966..53626012,-!p2@RARG!0.62!9.49!RARG;;chr11:65686802..65686818,+!p6@DRAP1!0.62!6.07!DRAP1;;chr17:41623667..41623682,-!p8@ETV4!0.62!3.42!ETV4;;chr19:6424813..6424835,-!p1@KHSRP!0.61!230.72!KHSRP;;chr16:4322832..4322907,-!p1@TFAP4!0.61!28.08!TFAP4;;chr5:92918894..92918912,+!p2@NR2F1!0.61!11.76!NR2F1;;chr7:42276787..42276815,-!p1@GLI3!0.61!9.49!GLI3;;chr5:92918768..92918783,+!p8@NR2F1!0.61!3.04!NR2F1;;chr6:10412576..10412599,-!p5@TFAP2A!0.61!3.04!TFAP2A;;chr6:41701581..41701613,-!p2@TFEB!0.61!3.04!TFEB;;chr16:86600458..86600461,+!p3@FOXC2!0.61!3.04!FOXC2;;chr17:8027418..8027432,-!p1@HES7!0.61!3.04!HES7;;chr19:58545454..58545498,+!p1@ZSCAN1!0.61!3.04!ZSCAN1;;chr10:119302645..119302712,+!p3@EMX2!0.61!3.04!EMX2;;chr10:119303078..119303169,+!p2@EMX2!0.61!3.04!EMX2;;chr12:66218420..66218439,+!p12@HMGA2!0.61!3.04!HMGA2;;chr12:85673868..85673881,+!p2@ALX1!0.61!3.04!ALX1;;chr14:64761083..64761101,-!p1@ESR2!0.61!3.04!ESR2;;chr17:42297226..42297246,-!p14@UBTF!0.60!4.55!UBTF;;chr9:77112244..77112262,+!p1@RORB!0.60!3.42!RORB;;chr8:48650715..48650735,-!p1@CEBPD!0.59!450.43!CEBPD;;chr6:34205372..34205412,+!p5@HMGA1!0.59!17.46!HMGA1;;chr19:1652555..1652568,-!p2@TCF3!0.59!14.04!TCF3;;chr6:10412392..10412409,-!p4@TFAP2A!0.59!3.42!TFAP2A;;chr19:1652575..1652621,-!p1@TCF3!0.58!130.92!TCF3;;chr19:3359591..3359667,+!p2@NFIC!0.58!39.09!NFIC;;chr20:306489..306564,+!p1@SOX12!0.58!37.19!SOX12;;chr7:14029283..14029311,-!p1@ETV1!0.58!18.21!ETV1;;chr1:247171316..247171336,-!p3@ZNF695!0.58!4.55!ZNF695;;chr19:49864746..49864780,-!p2@TEAD2!0.58!4.17!TEAD2;;chr1:8938736..8938756,-!p1@ENO1!0.57!3686.20!ENO1;;chr16:29817841..29817865,+!p1@MAZ!0.56!70.20!MAZ;;chr1:8763440..8763460,-!p2@RERE!0.56!16.32!RERE;;chr1:170632137..170632172,+!p10@PRRX1!0.56!2.66!PRRX1;;chr1:2985726..2985752,+!p2@PRDM16!0.56!2.66!PRDM16;;chr6:41701557..41701578,-!p3@TFEB!0.56!2.66!TFEB;;chr6:50789717..50789729,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ZBTB4;;chr18:52969813..52969823,-!p67@TCF4!0.33!1.14!TCF4;;chr19:13106465..13106477,+!p27@NFIX!0.33!1.14!NFIX;;chr19:23299851..23299880,+!p2@ZNF730!0.33!1.14!ZNF730;;chr19:3572758..3572795,+!p7@HMG20B!0.33!1.14!HMG20B;;chr5:92919194..92919204,+!p16@NR2F1!0.33!1.14!NR2F1;;chr6:1312155..1312187,+!p2@FOXQ1!0.33!1.14!FOXQ1;;chr6:50786057..50786069,+!p9@TFAP2B!0.33!1.14!TFAP2B;;chr6:50786547..50786564,+!p3@TFAP2B!0.33!1.14!TFAP2B;;chr6:50789547..50789550,+!p12@TFAP2B!0.33!1.14!TFAP2B;;chr6:50789737..50789746,+!p10@TFAP2B!0.33!1.14!TFAP2B;;chr7:150102756..150102772,+!p5@ZNF775!0.33!1.14!ZNF775;;chr7:42276771..42276782,-!p4@GLI3!0.33!1.14!GLI3;;chr8:60031534..60031553,-!p8@TOX!0.33!1.14!TOX;;chr22:42229100..42229146,+!p1@SREBF2!0.32!187.08!SREBF2;;chrX:53254373..53254406,-!p1@KDM5C!0.32!69.82!KDM5C;;chr19:42759266..42759290,-!p1@ERF!0.32!59.96!ERF;;chr19:19303731..19303783,+!p1@RFXANK!0.32!44.40!RFXANK;;chr2:242576460..242576600,-!p1@THAP4!0.32!28.46!THAP4;;chr19:58400372..58400411,-!p1@ZNF814!0.32!9.11!ZNF814;;chr15:71184724..71184778,-!p1@THAP10!0.32!6.45!THAP10;;chr17:38498594..38498661,+!p2@RARA!0.32!5.69!RARA;;chr2:217277480..217277505,+!p2@SMARCAL1!0.32!5.69!SMARCAL1;;chr4:1873155..1873185,+!p3@WHSC1!0.32!4.55!WHSC1;;chr15:66994663..66994680,+!p1@SMAD6!0.32!3.79!SMAD6;;chr1:8483821..8483845,-!p11@RERE!0.32!3.04!RERE;;chr19:56652686..56652701,+!p3@ZNF444!0.32!2.66!ZNF444;;chr3:32023232..32023273,+!p1@ZNF860!0.32!1.90!ZNF860;;chr19:23299814..23299844,+!p1@ZNF730!0.32!1.52!ZNF730;;chr9:16870659..16870675,-!p2@BNC2!0.32!1.52!BNC2;;chr19:58341656..58341694,+!p5@ZNF587!0.32!1.52!ZNF587;;chr1:6684918..6684936,+!p2@THAP3!0.32!1.52!THAP3;;chr5:124082279..124082319,-!p3@ZNF608!0.32!1.52!ZNF608;;chr7:14029312..14029325,-!p4@ETV1!0.32!1.52!ETV1;;chr7:150065733..150065752,+!p4@REPIN1,p4@ZNF775!0.32!1.52!ZNF775;;chr17:38474489..38474548,+!p1@RARA!0.31!57.68!RARA;;chr11:65687158..65687216,+!p4@DRAP1!0.31!9.87!DRAP1;;chr2:27357446..27357475,-!p2@PREB!0.31!5.69!PREB;;chr7:150945754..150945789,-!p2@SMARCD3!0.31!4.93!SMARCD3;;chr5:76383133..76383186,-!p2@ZBED3!0.31!3.04!ZBED3;;chr2:74375058..74375069,-!p3@BOLA3!0.31!2.66!BOLA3;;chr19:22817119..22817145,+!p1@ZNF492!0.31!2.28!ZNF492;;chr19:47922750..47922795,-!p1@MEIS3!0.31!2.28!MEIS3;;chr1:8483849..8483868,-!p14@RERE!0.31!2.28!RERE;;chr19:58400344..58400364,-!p2@ZNF814!0.31!1.90!ZNF814;;chr3:25469724..25469773,+!p1@RARB!0.31!1.90!RARB;;chr16:54320158..54320200,-!p5@IRX3!0.31!1.90!IRX3;;chrX:66763856..66763896,+!p1@AR!0.31!1.90!AR;;chr17:2304082..2304103,-!p5@MNT!0.31!1.52!MNT;;chr1:35658736..35658754,-!p1@SFPQ!0.30!650.42!SFPQ;;chr12:50478977..50479040,+!p1@SMARCD1!0.30!39.47!SMARCD1;;chr9:35732592..35732640,+!p1@CREB3!0.30!23.53!CREB3;;chr8:37553261..37553282,+!p2@ZNF703!0.30!13.28!ZNF703;;chr5:138609782..138609826,+!p5@MATR3!0.30!11.00!MATR3;;chr18:77160282..77160343,+!p2@NFATC1!0.30!10.63!NFATC1;;chr3:150126759..150126784,+!p2@TSC22D2!0.30!7.59!TSC22D2;;chr7:138666053..138666146,-!p1@KIAA1549!0.30!6.83!KIAA1549;;chr16:31085058..31085078,-!p2@ZNF668!0.30!3.04!ZNF668;;chrX:48900782..48900793,-!p3@TFE3!0.30!2.66!TFE3;;chr1:226595741..226595818,-!p1@PARP1!0.29!91.83!PARP1;;chr2:74374995..74375055,-!p1@BOLA3!0.29!78.55!BOLA3;;chr11:65101305..65101359,+!p1@DPF2!0.29!69.06!DPF2;;chr7:137686791..137686821,-!p1@CREB3L2!0.29!50.85!CREB3L2;;chr2:219524310..219524385,-!p1@ZNF142!0.29!25.05!ZNF142;;chr12:122516646..122516668,+!p1@MLXIP!0.29!23.15!MLXIP;;chr11:47236584..47236679,+!p1@DDB2!0.29!18.97!DDB2;;chr16:29819403..29819442,+!p5@MAZ!0.29!14.04!MAZ;;chr8:10697329..10697365,-!p2@PINX1,p2@SOX7!0.29!11.00!SOX7;;chr9:116638565..116638606,+!p1@ZNF618!0.29!6.83!ZNF618;;chr2:242576641..242576731,-!p2@THAP4!0.29!6.07!THAP4;;chr17:38498402..38498445,+!p3@RARA!0.29!5.69!RARA;;chr19:19516543..19516559,+!p6@GATAD2A!0.29!4.93!GATAD2A;;chr12:6798056..6798102,-!p3@ZNF384!0.29!4.55!ZNF384;;chr1:44679159..44679189,+!p2@DMAP1!0.29!4.17!DMAP1;;chr5:124082322..124082364,-!p1@ZNF608!0.29!3.79!ZNF608;;chr12:53614155..53614187,-!p3@RARG!0.29!2.66!RARG;;chr12:53774035..53774058,+!p4@SP1!0.29!2.66!SP1;;chr1:151032142..151032195,+!p5@MLLT11!0.29!2.66!MLLT11;;chr19:17356436..17356481,-!p3@NR2F6!0.29!2.28!NR2F6;;chr9:16870710..16870763,-!p1@BNC2!0.29!2.28!BNC2;;chr12:6798523..6798548,-!p6@ZNF384!0.29!2.28!ZNF384;;chr12:51566592..51566617,-!p3@TFCP2!0.29!1.90!TFCP2;;chr18:52989081..52989117,-!p7@TCF4!0.29!1.90!TCF4;;chr16:1664146..1664187,+!p2@CRAMP1L!0.29!1.52!CRAMP1L;;chr19:39390652..39390663,+!p3@NFKBIB!0.29!1.52!NFKBIB;;chr5:92918860..92918871,+!p10@NR2F1!0.29!1.14!NR2F1;;chr3:21792585..21792625,-!p2@ZNF385D!0.29!1.14!ZNF385D;;chr1:149858461..149858479,+!p1@BOLA1!0.28!678.50!BOLA1;;chr12:53835508..53835533,+!p1@PRR13,p2@PCBP2!0.28!130.92!PCBP2;;chr15:67358163..67358192,+!p1@SMAD3!0.28!40.22!SMAD3;;chr17:47492236..47492251,-!p1@PHB!0.28!23.53!PHB;;chr6:144329384..144329405,-!p1@PLAGL1!0.28!19.35!PLAGL1;;chr19:44100728..44100804,+!p1@SRRM5,p1@ZNF576!0.28!16.32!ZNF576;;chr17:7387524..7387597,-!p1@ZBTB4!0.28!15.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| |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!2.01!102.08!TCF21;;chr9:132427883..132427951,+!p2@PRRX2!1.87!72.86!PRRX2;;chr16:86544113..86544145,+!p1@FOXF1!1.86!87.28!FOXF1;;chr6:34204921..34204939,+!p3@HMGA1!1.82!1811.98!HMGA1;;chr7:19157248..19157268,-!p1@TWIST1!1.67!121.43!TWIST1;;chr9:132427972..132428056,+!p1@PRRX2!1.60!50.09!PRRX2;;chr4:111544219..111544240,-!p1@PITX2!1.56!35.67!PITX2;;chr5:2751762..2751784,-!p1@IRX2!1.50!30.74!IRX2;;chr6:50786591..50786614,+!p1@TFAP2B!1.50!30.36!TFAP2B;;chr2:239756671..239756732,+!p1@TWIST2!1.48!91.07!TWIST2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.47!28.84!POU3F3;;chr2:239756739..239756755,+!p2@TWIST2!1.44!45.16!TWIST2;;chr12:66218255..66218304,+!p3@HMGA2!1.43!68.68!HMGA2;;chr3:128206762..128206781,-!p2@GATA2!1.34!125.61!GATA2;;chr11:46299199..46299233,+!p1@CREB3L1!1.34!103.98!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.30!25.42!PRRX1;;chr3:128212033..128212051,-!p1@GATA2!1.29!18.59!GATA2;;chr19:46801639..46801699,+!p1@HIF3A!1.27!17.46!HIF3A;;chr4:111558135..111558198,-!p2@PITX2!1.26!17.08!PITX2;;chr9:129376201..129376225,+!p1@LMX1B!1.24!16.32!LMX1B;;chr9:129376233..129376251,+!p2@LMX1B!1.21!15.18!LMX1B;;chr20:42543441..42543497,+!p1@TOX2!1.17!61.10!TOX2;;chr17:41622925..41622976,-!p3@ETV4!1.17!20.87!ETV4;;chr1:170632285..170632309,+!p1@PRRX1!1.17!15.56!PRRX1;;chr7:44143925..44143970,+!p1@AEBP1!1.15!287.26!AEBP1;;chr11:46299539..46299620,+!p2@CREB3L1!1.15!22.39!CREB3L1;;chr17:41622765..41622821,-!p2@ETV4!1.14!19.73!ETV4;;chr20:55204351..55204377,+!p1@TFAP2C!1.14!16.32!TFAP2C;;chr6:1389789..1389821,+!p1@FOXF2!1.13!17.08!FOXF2;;chr14:74256787..74256858,-!p6@C14orf43!1.13!12.52!C14orf43;;chr17:41623009..41623053,-!p4@ETV4!1.10!18.59!ETV4;;chr6:85474299..85474324,-!p1@TBX18!1.09!20.11!TBX18;;chr17:41623692..41623715,-!p1@ETV4!1.08!47.05!ETV4;;chr19:45260775..45260838,+!p5@BCL3!1.08!14.42!BCL3;;chr2:5832508..5832524,+!p1@SOX11!1.07!10.63!SOX11;;chr17:59477233..59477263,+!p1@TBX2!1.06!33.01!TBX2;;chr15:57511609..57511651,+!p2@TCF12!1.05!17.46!TCF12;;chr5:3595977..3595999,+!p1@IRX1!1.05!10.25!IRX1;;chr16:86600426..86600441,+!p1@FOXC2!1.02!23.53!FOXC2;;chr20:42543506..42543549,+!p2@TOX2!1.02!23.15!TOX2;;chr17:41622731..41622764,-!p5@ETV4!1.02!9.49!ETV4;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.02!9.49!POU3F3;;chr12:2986206..2986258,-!p2@FOXM1!1.00!55.02!FOXM1;;chr3:138665937..138665968,-!p1@FOXL2!1.00!9.11!FOXL2;;chr4:111544254..111544270,-!p3@PITX2!1.00!9.11!PITX2;;chr14:61116183..61116208,-!p1@SIX1!0.99!33.77!SIX1;;chr6:10412600..10412637,-!p1@TFAP2A!0.97!14.04!TFAP2A;;chr12:66218598..66218645,+!p2@HMGA2!0.95!37.57!HMGA2;;chr12:66218183..66218209,+!p4@HMGA2!0.95!15.56!HMGA2;;chr18:52969674..52969685,-!p24@TCF4!0.95!7.97!TCF4;;chr6:85473156..85473210,-!p2@TBX18!0.94!9.49!TBX18;;chr17:41622834..41622883,-!p6@ETV4!0.93!9.11!ETV4;;chr18:52969844..52969895,-!p27@TCF4!0.93!7.59!TCF4;;chr5:3595934..3595957,+!p2@IRX1!0.93!7.59!IRX1;;chr12:2986275..2986363,-!p1@FOXM1!0.91!74.00!FOXM1;;chr12:66218212..66218244,+!p5@HMGA2!0.91!10.63!HMGA2;;chr19:38720294..38720348,-!p1@DPF1!0.91!9.11!DPF1;;chr5:92918919..92918942,+!p1@NR2F1!0.90!32.26!NR2F1;;chr20:42295713..42295738,+!p2@MYBL2!0.89!41.74!MYBL2;;chr11:47279504..47279563,+!p1@NR1H3!0.89!15.94!NR1H3;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.89!7.21!GLIS1;;chr4:299227..299272,-!p1@ZNF732!0.89!6.83!ZNF732;;chr5:2751785..2751808,-!p2@IRX2!0.89!6.83!IRX2;;chr6:34204973..34204990,+!p4@HMGA1!0.88!93.35!HMGA1;;chr2:19558373..19558392,-!p1@OSR1!0.88!18.59!OSR1;;chr6:1312325..1312340,+!p1@FOXQ1!0.88!11.00!FOXQ1;;chr6:50786571..50786590,+!p2@TFAP2B!0.87!6.45!TFAP2B;;chr8:60031809..60031835,-!p4@TOX!0.85!7.97!TOX;;chr17:41623075..41623101,-!p9@ETV4!0.85!7.21!ETV4;;chr15:67418119..67418162,+!p5@SMAD3!0.85!6.83!SMAD3;;chr12:85673977..85674015,+!p1@ALX1!0.85!6.07!ALX1;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!0.85!6.07!POU3F3;;chr20:42295745..42295765,+!p1@MYBL2!0.83!100.18!MYBL2;;chr17:59477197..59477212,+!p2@TBX2!0.83!10.25!TBX2;;chr5:3595961..3595975,+!p3@IRX1!0.83!5.69!IRX1;;chr7:19157043..19157088,-!p2@TWIST1!0.82!14.80!TWIST1;;chr16:54964740..54964789,+!p1@IRX5!0.82!8.35!IRX5;;chr11:113930425..113930471,+!p1@ZBTB16!0.82!8.35!ZBTB16;;chr6:31126291..31126399,+!p1@TCF19!0.81!55.40!TCF19;;chr2:121493425..121493474,+!p1@GLI2!0.81!12.52!GLI2;;chr12:53614115..53614154,-!p1@RARG!0.80!30.74!RARG;;chr11:63684602..63684664,-!p1@RCOR2!0.80!11.00!RCOR2;;chr16:54964899..54964914,+!p2@IRX5!0.80!5.31!IRX5;;chr17:17726907..17726958,-!p2@SREBF1!0.79!34.53!SREBF1;;chr11:65686952..65686975,+!p5@DRAP1!0.79!31.12!DRAP1;;chr1:164528445..164528459,+!p2@PBX1!0.79!17.46!PBX1;;chr7:44143978..44143989,+!p2@AEBP1!0.79!9.87!AEBP1;;chr4:4861385..4861398,+!p1@MSX1!0.78!15.94!MSX1;;chr5:134369905..134369972,-!p1@PITX1!0.78!7.97!PITX1;;chr3:185826855..185826911,-!p1@ETV5!0.77!148.75!ETV5;;chr1:8483878..8483907,-!p4@RERE!0.77!20.49!RERE;;chr12:66218378..66218401,+!p6@HMGA2!0.77!7.97!HMGA2;;chr10:119302232..119302265,+!p1@EMX2!0.77!4.93!EMX2;;chr1:170632250..170632277,+!p7@PRRX1!0.77!4.93!PRRX1;;chr17:41622982..41623001,-!p11@ETV4!0.77!4.93!ETV4;;chr8:60031619..60031676,-!p1@TOX!0.76!11.00!TOX;;chr12:66218443..66218461,+!p8@HMGA2!0.75!6.07!HMGA2;;chr5:92919068..92919082,+!p5@NR2F1!0.75!5.69!NR2F1;;chr11:46299186..46299195,+!p3@CREB3L1!0.75!5.31!CREB3L1;;chr11:65667846..65667868,-!p1@FOSL1!0.74!133.57!FOSL1;;chr3:12329397..12329433,+!p2@PPARG!0.74!11.00!PPARG;;chr5:134369879..134369898,-!p2@PITX1!0.74!4.55!PITX1;;chr6:34204672..34204692,+!p1@HMGA1!0.73!559.34!HMGA1;;chr17:70117153..70117174,+!p1@SOX9!0.73!50.85!SOX9;;chr17:1959369..1959388,+!p2@HIC1!0.73!12.52!HIC1;;chr16:73093174..73093209,-!p3@ZFHX3!0.73!6.07!ZFHX3;;chr12:66218836..66218888,+!p1@HMGA2!0.72!44.40!HMGA2;;chr19:49865646..49865718,-!p1@TEAD2!0.72!40.60!TEAD2;;chr5:176738887..176738934,-!p1@MXD3!0.72!31.88!MXD3;;chr3:12329358..12329393,+!p3@PPARG!0.72!11.38!PPARG;;chr6:10415276..10415341,-!p2@TFAP2A!0.72!5.31!TFAP2A;;chr15:83953397..83953425,-!p1@BNC1!0.72!4.93!BNC1;;chr1:170633262..170633285,+!p3@PRRX1!0.72!4.93!PRRX1;;chr12:66218152..66218174,+!p10@HMGA2!0.72!4.55!HMGA2;;chr12:115121962..115121987,-!p1@TBX3!0.71!38.71!TBX3;;chr12:7079780..7079791,-!p2@PHB2!0.71!23.91!PHB2;;chr11:65667884..65667895,-!p2@FOSL1!0.71!17.84!FOSL1;;chr7:42276822..42276895,-!p2@GLI3!0.71!13.66!GLI3;;chr8:60031934..60031986,-!p6@TOX!0.71!4.17!TOX;;chr10:119302508..119302559,+!p5@EMX2!0.71!4.17!EMX2;;chr15:67418177..67418204,+!p9@SMAD3!0.71!4.17!SMAD3;;chr16:86600870..86600921,+!p2@FOXC2!0.71!4.17!FOXC2;;chr5:321810..321877,+!p1@AHRR!0.70!14.04!AHRR;;chr14:21994337..21994442,-!p1@SALL2!0.70!12.14!SALL2;;chr15:67418047..67418093,+!p4@SMAD3!0.70!5.31!SMAD3;;chr9:102584262..102584276,+!p1@NR4A3!0.69!9.49!NR4A3;;chr1:23857698..23857733,-!p1@E2F2!0.69!7.59!E2F2;;chrX:66763815..66763854,+!p2@AR!0.69!5.31!AR;;chr12:66218003..66218018,+!p9@HMGA2!0.69!4.93!HMGA2;;chr19:1592714..1592762,-!p1@MBD3!0.68!32.63!MBD3;;chr17:59477275..59477286,+!p3@TBX2!0.68!5.31!TBX2;;chr2:96012397..96012417,+!p3@KCNIP3!0.68!3.79!KCNIP3;;chr11:46299443..46299459,+!p4@CREB3L1!0.68!3.79!CREB3L1;;chr8:93074803..93074845,-!p1@RUNX1T1!0.68!3.79!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.68!3.79!RUNX1T1;;chr19:6424783..6424802,-!p2@KHSRP!0.67!86.90!KHSRP;;chr8:60031682..60031710,-!p2@TOX!0.67!6.45!TOX;;chr17:42295777..42295816,-!p7@UBTF!0.67!4.55!UBTF;;chr19:3366570..3366619,+!p1@NFIC!0.66!133.57!NFIC;;chr6:1610293..1610310,+!p1@FOXC1!0.66!6.45!FOXC1;;chr20:50721803..50721857,-!p2@ZFP64!0.66!6.07!ZFP64;;chr3:52001448..52001478,-!p2@PCBP4!0.65!56.92!PCBP4;;chr1:151032860..151032918,+!p1@MLLT11!0.65!47.81!MLLT11;;chr19:13134772..13134822,+!p2@NFIX!0.64!5.31!NFIX;;chr19:50542543..50542548,+!p2@ZNF473!0.64!3.42!ZNF473;;chr1:110613238..110613272,-!p1@ALX3!0.64!3.42!ALX3;;chr6:50786479..50786490,+!p6@TFAP2B!0.64!3.42!TFAP2B;;chr4:111558118..111558133,-!p5@PITX2!0.64!3.42!PITX2;;chr11:44331576..44331650,-!p1@ALX4!0.64!3.42!ALX4;;chr9:102584159..102584174,+!p2@NR4A3!0.63!6.45!NR4A3;;chr17:1958388..1958404,+!p1@HIC1!0.62!23.91!HIC1;;chr12:53625966..53626012,-!p2@RARG!0.62!9.49!RARG;;chr11:65686802..65686818,+!p6@DRAP1!0.62!6.07!DRAP1;;chr17:41623667..41623682,-!p8@ETV4!0.62!3.42!ETV4;;chr19:6424813..6424835,-!p1@KHSRP!0.61!230.72!KHSRP;;chr16:4322832..4322907,-!p1@TFAP4!0.61!28.08!TFAP4;;chr5:92918894..92918912,+!p2@NR2F1!0.61!11.76!NR2F1;;chr7:42276787..42276815,-!p1@GLI3!0.61!9.49!GLI3;;chr5:92918768..92918783,+!p8@NR2F1!0.61!3.04!NR2F1;;chr6:10412576..10412599,-!p5@TFAP2A!0.61!3.04!TFAP2A;;chr6:41701581..41701613,-!p2@TFEB!0.61!3.04!TFEB;;chr16:86600458..86600461,+!p3@FOXC2!0.61!3.04!FOXC2;;chr17:8027418..8027432,-!p1@HES7!0.61!3.04!HES7;;chr19:58545454..58545498,+!p1@ZSCAN1!0.61!3.04!ZSCAN1;;chr10:119302645..119302712,+!p3@EMX2!0.61!3.04!EMX2;;chr10:119303078..119303169,+!p2@EMX2!0.61!3.04!EMX2;;chr12:66218420..66218439,+!p12@HMGA2!0.61!3.04!HMGA2;;chr12:85673868..85673881,+!p2@ALX1!0.61!3.04!ALX1;;chr14:64761083..64761101,-!p1@ESR2!0.61!3.04!ESR2;;chr17:42297226..42297246,-!p14@UBTF!0.60!4.55!UBTF;;chr9:77112244..77112262,+!p1@RORB!0.60!3.42!RORB;;chr8:48650715..48650735,-!p1@CEBPD!0.59!450.43!CEBPD;;chr6:34205372..34205412,+!p5@HMGA1!0.59!17.46!HMGA1;;chr19:1652555..1652568,-!p2@TCF3!0.59!14.04!TCF3;;chr6:10412392..10412409,-!p4@TFAP2A!0.59!3.42!TFAP2A;;chr19:1652575..1652621,-!p1@TCF3!0.58!130.92!TCF3;;chr19:3359591..3359667,+!p2@NFIC!0.58!39.09!NFIC;;chr20:306489..306564,+!p1@SOX12!0.58!37.19!SOX12;;chr7:14029283..14029311,-!p1@ETV1!0.58!18.21!ETV1;;chr1:247171316..247171336,-!p3@ZNF695!0.58!4.55!ZNF695;;chr19:49864746..49864780,-!p2@TEAD2!0.58!4.17!TEAD2;;chr1:8938736..8938756,-!p1@ENO1!0.57!3686.20!ENO1;;chr16:29817841..29817865,+!p1@MAZ!0.56!70.20!MAZ;;chr1:8763440..8763460,-!p2@RERE!0.56!16.32!RERE;;chr1:170632137..170632172,+!p10@PRRX1!0.56!2.66!PRRX1;;chr1:2985726..2985752,+!p2@PRDM16!0.56!2.66!PRDM16;;chr6:41701557..41701578,-!p3@TFEB!0.56!2.66!TFEB;;chr6:50789717..50789729,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ZBTB4;;chr18:52969813..52969823,-!p67@TCF4!0.33!1.14!TCF4;;chr19:13106465..13106477,+!p27@NFIX!0.33!1.14!NFIX;;chr19:23299851..23299880,+!p2@ZNF730!0.33!1.14!ZNF730;;chr19:3572758..3572795,+!p7@HMG20B!0.33!1.14!HMG20B;;chr5:92919194..92919204,+!p16@NR2F1!0.33!1.14!NR2F1;;chr6:1312155..1312187,+!p2@FOXQ1!0.33!1.14!FOXQ1;;chr6:50786057..50786069,+!p9@TFAP2B!0.33!1.14!TFAP2B;;chr6:50786547..50786564,+!p3@TFAP2B!0.33!1.14!TFAP2B;;chr6:50789547..50789550,+!p12@TFAP2B!0.33!1.14!TFAP2B;;chr6:50789737..50789746,+!p10@TFAP2B!0.33!1.14!TFAP2B;;chr7:150102756..150102772,+!p5@ZNF775!0.33!1.14!ZNF775;;chr7:42276771..42276782,-!p4@GLI3!0.33!1.14!GLI3;;chr8:60031534..60031553,-!p8@TOX!0.33!1.14!TOX;;chr22:42229100..42229146,+!p1@SREBF2!0.32!187.08!SREBF2;;chrX:53254373..53254406,-!p1@KDM5C!0.32!69.82!KDM5C;;chr19:42759266..42759290,-!p1@ERF!0.32!59.96!ERF;;chr19:19303731..19303783,+!p1@RFXANK!0.32!44.40!RFXANK;;chr2:242576460..242576600,-!p1@THAP4!0.32!28.46!THAP4;;chr19:58400372..58400411,-!p1@ZNF814!0.32!9.11!ZNF814;;chr15:71184724..71184778,-!p1@THAP10!0.32!6.45!THAP10;;chr17:38498594..38498661,+!p2@RARA!0.32!5.69!RARA;;chr2:217277480..217277505,+!p2@SMARCAL1!0.32!5.69!SMARCAL1;;chr4:1873155..1873185,+!p3@WHSC1!0.32!4.55!WHSC1;;chr15:66994663..66994680,+!p1@SMAD6!0.32!3.79!SMAD6;;chr1:8483821..8483845,-!p11@RERE!0.32!3.04!RERE;;chr19:56652686..56652701,+!p3@ZNF444!0.32!2.66!ZNF444;;chr3:32023232..32023273,+!p1@ZNF860!0.32!1.90!ZNF860;;chr19:23299814..23299844,+!p1@ZNF730!0.32!1.52!ZNF730;;chr9:16870659..16870675,-!p2@BNC2!0.32!1.52!BNC2;;chr19:58341656..58341694,+!p5@ZNF587!0.32!1.52!ZNF587;;chr1:6684918..6684936,+!p2@THAP3!0.32!1.52!THAP3;;chr5:124082279..124082319,-!p3@ZNF608!0.32!1.52!ZNF608;;chr7:14029312..14029325,-!p4@ETV1!0.32!1.52!ETV1;;chr7:150065733..150065752,+!p4@REPIN1,p4@ZNF775!0.32!1.52!ZNF775;;chr17:38474489..38474548,+!p1@RARA!0.31!57.68!RARA;;chr11:65687158..65687216,+!p4@DRAP1!0.31!9.87!DRAP1;;chr2:27357446..27357475,-!p2@PREB!0.31!5.69!PREB;;chr7:150945754..150945789,-!p2@SMARCD3!0.31!4.93!SMARCD3;;chr5:76383133..76383186,-!p2@ZBED3!0.31!3.04!ZBED3;;chr2:74375058..74375069,-!p3@BOLA3!0.31!2.66!BOLA3;;chr19:22817119..22817145,+!p1@ZNF492!0.31!2.28!ZNF492;;chr19:47922750..47922795,-!p1@MEIS3!0.31!2.28!MEIS3;;chr1:8483849..8483868,-!p14@RERE!0.31!2.28!RERE;;chr19:58400344..58400364,-!p2@ZNF814!0.31!1.90!ZNF814;;chr3:25469724..25469773,+!p1@RARB!0.31!1.90!RARB;;chr16:54320158..54320200,-!p5@IRX3!0.31!1.90!IRX3;;chrX:66763856..66763896,+!p1@AR!0.31!1.90!AR;;chr17:2304082..2304103,-!p5@MNT!0.31!1.52!MNT;;chr1:35658736..35658754,-!p1@SFPQ!0.30!650.42!SFPQ;;chr12:50478977..50479040,+!p1@SMARCD1!0.30!39.47!SMARCD1;;chr9:35732592..35732640,+!p1@CREB3!0.30!23.53!CREB3;;chr8:37553261..37553282,+!p2@ZNF703!0.30!13.28!ZNF703;;chr5:138609782..138609826,+!p5@MATR3!0.30!11.00!MATR3;;chr18:77160282..77160343,+!p2@NFATC1!0.30!10.63!NFATC1;;chr3:150126759..150126784,+!p2@TSC22D2!0.30!7.59!TSC22D2;;chr7:138666053..138666146,-!p1@KIAA1549!0.30!6.83!KIAA1549;;chr16:31085058..31085078,-!p2@ZNF668!0.30!3.04!ZNF668;;chrX:48900782..48900793,-!p3@TFE3!0.30!2.66!TFE3;;chr1:226595741..226595818,-!p1@PARP1!0.29!91.83!PARP1;;chr2:74374995..74375055,-!p1@BOLA3!0.29!78.55!BOLA3;;chr11:65101305..65101359,+!p1@DPF2!0.29!69.06!DPF2;;chr7:137686791..137686821,-!p1@CREB3L2!0.29!50.85!CREB3L2;;chr2:219524310..219524385,-!p1@ZNF142!0.29!25.05!ZNF142;;chr12:122516646..122516668,+!p1@MLXIP!0.29!23.15!MLXIP;;chr11:47236584..47236679,+!p1@DDB2!0.29!18.97!DDB2;;chr16:29819403..29819442,+!p5@MAZ!0.29!14.04!MAZ;;chr8:10697329..10697365,-!p2@PINX1,p2@SOX7!0.29!11.00!SOX7;;chr9:116638565..116638606,+!p1@ZNF618!0.29!6.83!ZNF618;;chr2:242576641..242576731,-!p2@THAP4!0.29!6.07!THAP4;;chr17:38498402..38498445,+!p3@RARA!0.29!5.69!RARA;;chr19:19516543..19516559,+!p6@GATAD2A!0.29!4.93!GATAD2A;;chr12:6798056..6798102,-!p3@ZNF384!0.29!4.55!ZNF384;;chr1:44679159..44679189,+!p2@DMAP1!0.29!4.17!DMAP1;;chr5:124082322..124082364,-!p1@ZNF608!0.29!3.79!ZNF608;;chr12:53614155..53614187,-!p3@RARG!0.29!2.66!RARG;;chr12:53774035..53774058,+!p4@SP1!0.29!2.66!SP1;;chr1:151032142..151032195,+!p5@MLLT11!0.29!2.66!MLLT11;;chr19:17356436..17356481,-!p3@NR2F6!0.29!2.28!NR2F6;;chr9:16870710..16870763,-!p1@BNC2!0.29!2.28!BNC2;;chr12:6798523..6798548,-!p6@ZNF384!0.29!2.28!ZNF384;;chr12:51566592..51566617,-!p3@TFCP2!0.29!1.90!TFCP2;;chr18:52989081..52989117,-!p7@TCF4!0.29!1.90!TCF4;;chr16:1664146..1664187,+!p2@CRAMP1L!0.29!1.52!CRAMP1L;;chr19:39390652..39390663,+!p3@NFKBIB!0.29!1.52!NFKBIB;;chr5:92918860..92918871,+!p10@NR2F1!0.29!1.14!NR2F1;;chr3:21792585..21792625,-!p2@ZNF385D!0.29!1.14!ZNF385D;;chr1:149858461..149858479,+!p1@BOLA1!0.28!678.50!BOLA1;;chr12:53835508..53835533,+!p1@PRR13,p2@PCBP2!0.28!130.92!PCBP2;;chr15:67358163..67358192,+!p1@SMAD3!0.28!40.22!SMAD3;;chr17:47492236..47492251,-!p1@PHB!0.28!23.53!PHB;;chr6:144329384..144329405,-!p1@PLAGL1!0.28!19.35!PLAGL1;;chr19:44100728..44100804,+!p1@SRRM5,p1@ZNF576!0.28!16.32!ZNF576;;chr17:7387524..7387597,-!p1@ZBTB4!0.28!15.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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000115;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000213;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002078;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002367;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000970;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001768;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001801;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0006876 | |||
|ffid_belonging_in_development=CL:0000222 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor1.CNhs11340.11532-120A2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor1.CNhs11340.11532-120A2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor1.CNhs11340.11532-120A2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor1.CNhs11340.11532-120A2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor1.CNhs11340.11532-120A2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11532-120A2 | |id=FF:11532-120A2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000188 | ||
|is_obsolete= | |||
|library_id=CNhs11340 | |||
|library_id_phase_based=2:CNhs11340 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11532 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10008.GTCCGC.11532 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11532 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10008.GTCCGC.11532 | |||
|name=Trabecular Meshwork Cells, donor1 | |name=Trabecular Meshwork Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11340,LSID769,release014,COMPLETED | |profile_hcage=CNhs11340,LSID769,release014,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10008,,, | |profile_srnaseq=SRhi10008,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.0206047707940534,0,-0.137648872901181,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0136097510560949,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.178240801573814,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.71384362386604,0,0.0647076368164436,0.139713259292333,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0461596407038735,0,0,0,0,0,0,0.130092543396431,0,0,0,-0.0584468268118252,0.0198042672015939,0,0,0,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.0697861206481443,-0.0872951801455018,0,0,0,0,0,0 | |||
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| |||
|rna_box=120 | |rna_box=120 | ||
|rna_catalog_number=SC6595 | |rna_catalog_number=SC6595 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=120A2 | |rna_tube_id=120A2 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10008.GTCCGC | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 77: | Line 105: | ||
|sample_tissue=eye | |sample_tissue=eye | ||
|top_motifs=GTF2A1,2:1.38882320243;ZNF238:1.34527405697;LHX3,4:1.2504057039;TAL1_TCF{3,4,12}:1.21151688207;GZF1:1.15075632372;EBF1:1.1391167126;ZNF423:1.13283001149;XCPE1{core}:1.06852695814;PBX1:1.02033691633;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.01337695445;TFDP1:0.953744300978;HOX{A5,B5}:0.943501109434;NFY{A,B,C}:0.92971338831;RXR{A,B,G}:0.874127566242;GFI1:0.86701072899;LEF1_TCF7_TCF7L1,2:0.817267725295;CRX:0.803738207583;HES1:0.764047101825;HAND1,2:0.751404852857;NKX2-2,8:0.737306194585;HOX{A6,A7,B6,B7}:0.710685592513;E2F1..5:0.700413341995;bHLH_family:0.676734268355;TLX1..3_NFIC{dimer}:0.653510282245;ZIC1..3:0.643940035355;TFCP2:0.632306926383;TOPORS:0.600636091925;AR:0.588207436262;POU5F1:0.573167694585;TFAP4:0.552676691986;POU2F1..3:0.545156481729;GFI1B:0.5338848676;NR3C1:0.524044307141;NR5A1,2:0.514941693394;XBP1:0.51464529951;ZNF148:0.501433223509;SP1:0.487982621743;TEAD1:0.457297140684;ESR1:0.446358289984;RXRA_VDR{dimer}:0.436695761366;NFE2L2:0.401215543695;GTF2I:0.398049321437;SOX{8,9,10}:0.392642061495;ZNF143:0.392351624643;POU1F1:0.374085313082;PAX8:0.358895839282;MYBL2:0.357505513389;TFAP2B:0.328878306407;MYB:0.324181957094;PATZ1:0.321570881754;NR1H4:0.317521490619;MTF1:0.316501805807;HIC1:0.306136663414;RREB1:0.30371614737;TBP:0.288266544141;PAX1,9:0.287336028513;STAT5{A,B}:0.272776767617;PAX5:0.270790596015;SOX5:0.250095217119;KLF4:0.243333937847;NANOG:0.24211663846;ADNP_IRX_SIX_ZHX:0.241619480646;PRRX1,2:0.227661210199;GLI1..3:0.196195612443;IKZF1:0.181776772405;HNF4A_NR2F1,2:0.176961334431;TP53:0.171599240247;BACH2:0.164006349651;NKX2-3_NKX2-5:0.15288618079;SOX17:0.137962411734;FOX{I1,J2}:0.126243327483;NFE2L1:0.123495573321;NKX3-1:0.121625296515;TBX4,5:0.117966508995;HNF1A:0.108164546315;NFE2:0.106110433849;ZBTB6:0.0985080495856;T:0.0900876264156;SPZ1:0.0822875699474;CEBPA,B_DDIT3:0.0815814954401;PDX1:0.0752229018601;TFAP2{A,C}:0.0681317453945;FOS_FOS{B,L1}_JUN{B,D}:0.0677925659128;HLF:0.0606484230748;FOSL2:0.047260259284;PAX3,7:0.0372179326302;FOXA2:0.0266397023883;SRF:0.0258957117944;EN1,2:0.0192778615459;MZF1:0.00977835770647;ESRRA:0.00460330484418;ONECUT1,2:0.000357656996504;NKX6-1,2:-0.00855920006178;GATA6:-0.0086862505275;EP300:-0.0114499874664;TEF:-0.0252511208784;YY1:-0.0329802507281;ALX4:-0.0660641220169;NRF1:-0.0799512000249;RFX1:-0.0926256554765;EGR1..3:-0.093211413431;FOXQ1:-0.0942206656422;BREu{core}:-0.114619346824;MAZ:-0.117562495035;NFATC1..3:-0.120526622033;REST:-0.120772727695;CUX2:-0.122243007854;NR6A1:-0.125826734188;MEF2{A,B,C,D}:-0.129131321601;FOXD3:-0.131353276721;MED-1{core}:-0.155915655043;OCT4_SOX2{dimer}:-0.160102232352;RUNX1..3:-0.164142152312;SOX2:-0.196772538236;MYOD1:-0.200766452027;STAT2,4,6:-0.20964142673;HOXA9_MEIS1:-0.214346261674;FOX{F1,F2,J1}:-0.226267162207;CDC5L:-0.23338539961;HBP1_HMGB_SSRP1_UBTF:-0.255642413016;LMO2:-0.256120397937;ELK1,4_GABP{A,B1}:-0.261062009592;NHLH1,2:-0.270687383705;RORA:-0.27997265421;JUN:-0.280334389506;AIRE:-0.290743272162;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.312216704199;GCM1,2:-0.315914279025;NANOG{mouse}:-0.364885897358;PITX1..3:-0.366907266867;ETS1,2:-0.375586410579;UFEwm:-0.382691601676;VSX1,2:-0.383204581557;PAX6:-0.389311400326;AHR_ARNT_ARNT2:-0.403095423281;POU3F1..4:-0.403123256142;NFKB1_REL_RELA:-0.407910897629;HSF1,2:-0.411058812546;ARID5B:-0.411424420816;ELF1,2,4:-0.427675258693;PAX4:-0.431335436989;SPIB:-0.451909202072;ZFP161:-0.458017084304;STAT1,3:-0.458857224507;ZNF384:-0.463782609179;ATF6:-0.479871558237;HMX1:-0.487640567022;SPI1:-0.519905470525;PRDM1:-0.526911766464;SNAI1..3:-0.535726711605;DBP:-0.539174469371;NFIL3:-0.53976022788;EVI1:-0.54384762508;MYFfamily:-0.548398241925;ZEB1:-0.579528832313;TGIF1:-0.596739816231;NFIX:-0.61872412671;FOXL1:-0.625239804138;CREB1:-0.654437090142;PPARG:-0.659687240716;FOXM1:-0.68254546969;HIF1A:-0.684170571934;ATF2:-0.685211551701;MTE{core}:-0.685513807514;FOXO1,3,4:-0.695770952828;POU6F1:-0.699123789535;ATF5_CREB3:-0.732707059088;GATA4:-0.73576636756;SMAD1..7,9:-0.737970488028;HOX{A4,D4}:-0.752303278338;DMAP1_NCOR{1,2}_SMARC:-0.760288442003;FOXP3:-0.788343060576;TLX2:-0.840395757565;PAX2:-0.845241049393;CDX1,2,4:-0.853337438027;IRF7:-0.856323388337;NKX3-2:-0.861401555776;IRF1,2:-0.867633061788;FOX{D1,D2}:-0.894508276236;MAFB:-0.894795615173;RFX2..5_RFXANK_RFXAP:-0.911660741525;BPTF:-0.927525751307;FOXP1:-0.957642636018;NKX2-1,4:-1.0010390671;ATF4:-1.00499458535;RBPJ:-1.29337568869;IKZF2:-1.36481733351;HMGA1,2:-1.38870228481;ZBTB16:-1.48057055005;SREBF1,2:-1.53566522964;ALX1:-1.54616013274;FOXN1:-1.64977651022 | |top_motifs=GTF2A1,2:1.38882320243;ZNF238:1.34527405697;LHX3,4:1.2504057039;TAL1_TCF{3,4,12}:1.21151688207;GZF1:1.15075632372;EBF1:1.1391167126;ZNF423:1.13283001149;XCPE1{core}:1.06852695814;PBX1:1.02033691633;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.01337695445;TFDP1:0.953744300978;HOX{A5,B5}:0.943501109434;NFY{A,B,C}:0.92971338831;RXR{A,B,G}:0.874127566242;GFI1:0.86701072899;LEF1_TCF7_TCF7L1,2:0.817267725295;CRX:0.803738207583;HES1:0.764047101825;HAND1,2:0.751404852857;NKX2-2,8:0.737306194585;HOX{A6,A7,B6,B7}:0.710685592513;E2F1..5:0.700413341995;bHLH_family:0.676734268355;TLX1..3_NFIC{dimer}:0.653510282245;ZIC1..3:0.643940035355;TFCP2:0.632306926383;TOPORS:0.600636091925;AR:0.588207436262;POU5F1:0.573167694585;TFAP4:0.552676691986;POU2F1..3:0.545156481729;GFI1B:0.5338848676;NR3C1:0.524044307141;NR5A1,2:0.514941693394;XBP1:0.51464529951;ZNF148:0.501433223509;SP1:0.487982621743;TEAD1:0.457297140684;ESR1:0.446358289984;RXRA_VDR{dimer}:0.436695761366;NFE2L2:0.401215543695;GTF2I:0.398049321437;SOX{8,9,10}:0.392642061495;ZNF143:0.392351624643;POU1F1:0.374085313082;PAX8:0.358895839282;MYBL2:0.357505513389;TFAP2B:0.328878306407;MYB:0.324181957094;PATZ1:0.321570881754;NR1H4:0.317521490619;MTF1:0.316501805807;HIC1:0.306136663414;RREB1:0.30371614737;TBP:0.288266544141;PAX1,9:0.287336028513;STAT5{A,B}:0.272776767617;PAX5:0.270790596015;SOX5:0.250095217119;KLF4:0.243333937847;NANOG:0.24211663846;ADNP_IRX_SIX_ZHX:0.241619480646;PRRX1,2:0.227661210199;GLI1..3:0.196195612443;IKZF1:0.181776772405;HNF4A_NR2F1,2:0.176961334431;TP53:0.171599240247;BACH2:0.164006349651;NKX2-3_NKX2-5:0.15288618079;SOX17:0.137962411734;FOX{I1,J2}:0.126243327483;NFE2L1:0.123495573321;NKX3-1:0.121625296515;TBX4,5:0.117966508995;HNF1A:0.108164546315;NFE2:0.106110433849;ZBTB6:0.0985080495856;T:0.0900876264156;SPZ1:0.0822875699474;CEBPA,B_DDIT3:0.0815814954401;PDX1:0.0752229018601;TFAP2{A,C}:0.0681317453945;FOS_FOS{B,L1}_JUN{B,D}:0.0677925659128;HLF:0.0606484230748;FOSL2:0.047260259284;PAX3,7:0.0372179326302;FOXA2:0.0266397023883;SRF:0.0258957117944;EN1,2:0.0192778615459;MZF1:0.00977835770647;ESRRA:0.00460330484418;ONECUT1,2:0.000357656996504;NKX6-1,2:-0.00855920006178;GATA6:-0.0086862505275;EP300:-0.0114499874664;TEF:-0.0252511208784;YY1:-0.0329802507281;ALX4:-0.0660641220169;NRF1:-0.0799512000249;RFX1:-0.0926256554765;EGR1..3:-0.093211413431;FOXQ1:-0.0942206656422;BREu{core}:-0.114619346824;MAZ:-0.117562495035;NFATC1..3:-0.120526622033;REST:-0.120772727695;CUX2:-0.122243007854;NR6A1:-0.125826734188;MEF2{A,B,C,D}:-0.129131321601;FOXD3:-0.131353276721;MED-1{core}:-0.155915655043;OCT4_SOX2{dimer}:-0.160102232352;RUNX1..3:-0.164142152312;SOX2:-0.196772538236;MYOD1:-0.200766452027;STAT2,4,6:-0.20964142673;HOXA9_MEIS1:-0.214346261674;FOX{F1,F2,J1}:-0.226267162207;CDC5L:-0.23338539961;HBP1_HMGB_SSRP1_UBTF:-0.255642413016;LMO2:-0.256120397937;ELK1,4_GABP{A,B1}:-0.261062009592;NHLH1,2:-0.270687383705;RORA:-0.27997265421;JUN:-0.280334389506;AIRE:-0.290743272162;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.312216704199;GCM1,2:-0.315914279025;NANOG{mouse}:-0.364885897358;PITX1..3:-0.366907266867;ETS1,2:-0.375586410579;UFEwm:-0.382691601676;VSX1,2:-0.383204581557;PAX6:-0.389311400326;AHR_ARNT_ARNT2:-0.403095423281;POU3F1..4:-0.403123256142;NFKB1_REL_RELA:-0.407910897629;HSF1,2:-0.411058812546;ARID5B:-0.411424420816;ELF1,2,4:-0.427675258693;PAX4:-0.431335436989;SPIB:-0.451909202072;ZFP161:-0.458017084304;STAT1,3:-0.458857224507;ZNF384:-0.463782609179;ATF6:-0.479871558237;HMX1:-0.487640567022;SPI1:-0.519905470525;PRDM1:-0.526911766464;SNAI1..3:-0.535726711605;DBP:-0.539174469371;NFIL3:-0.53976022788;EVI1:-0.54384762508;MYFfamily:-0.548398241925;ZEB1:-0.579528832313;TGIF1:-0.596739816231;NFIX:-0.61872412671;FOXL1:-0.625239804138;CREB1:-0.654437090142;PPARG:-0.659687240716;FOXM1:-0.68254546969;HIF1A:-0.684170571934;ATF2:-0.685211551701;MTE{core}:-0.685513807514;FOXO1,3,4:-0.695770952828;POU6F1:-0.699123789535;ATF5_CREB3:-0.732707059088;GATA4:-0.73576636756;SMAD1..7,9:-0.737970488028;HOX{A4,D4}:-0.752303278338;DMAP1_NCOR{1,2}_SMARC:-0.760288442003;FOXP3:-0.788343060576;TLX2:-0.840395757565;PAX2:-0.845241049393;CDX1,2,4:-0.853337438027;IRF7:-0.856323388337;NKX3-2:-0.861401555776;IRF1,2:-0.867633061788;FOX{D1,D2}:-0.894508276236;MAFB:-0.894795615173;RFX2..5_RFXANK_RFXAP:-0.911660741525;BPTF:-0.927525751307;FOXP1:-0.957642636018;NKX2-1,4:-1.0010390671;ATF4:-1.00499458535;RBPJ:-1.29337568869;IKZF2:-1.36481733351;HMGA1,2:-1.38870228481;ZBTB16:-1.48057055005;SREBF1,2:-1.53566522964;ALX1:-1.54616013274;FOXN1:-1.64977651022 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11532-120A2;search_select_hide=table117:FF:11532-120A2 | |||
}} | }} | ||
Latest revision as of 18:07, 4 June 2020
| Name: | Trabecular Meshwork Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11340 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11340
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11340
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.527 |
| 10 | 10 | 0.239 |
| 100 | 100 | 0.708 |
| 101 | 101 | 0.172 |
| 102 | 102 | 0.637 |
| 103 | 103 | 0.287 |
| 104 | 104 | 0.337 |
| 105 | 105 | 0.0283 |
| 106 | 106 | 0.838 |
| 107 | 107 | 0.441 |
| 108 | 108 | 0.571 |
| 109 | 109 | 0.105 |
| 11 | 11 | 0.228 |
| 110 | 110 | 0.097 |
| 111 | 111 | 0.361 |
| 112 | 112 | 0.347 |
| 113 | 113 | 0.643 |
| 114 | 114 | 0.244 |
| 115 | 115 | 0.982 |
| 116 | 116 | 0.361 |
| 117 | 117 | 0.977 |
| 118 | 118 | 0.755 |
| 119 | 119 | 0.508 |
| 12 | 12 | 0.566 |
| 120 | 120 | 0.48 |
| 121 | 121 | 0.309 |
| 122 | 122 | 0.833 |
| 123 | 123 | 0.0377 |
| 124 | 124 | 0.642 |
| 125 | 125 | 0.375 |
| 126 | 126 | 0.898 |
| 127 | 127 | 0.86 |
| 128 | 128 | 0.821 |
| 129 | 129 | 0.431 |
| 13 | 13 | 0.47 |
| 130 | 130 | 0.00712 |
| 131 | 131 | 0.83 |
| 132 | 132 | 0.206 |
| 133 | 133 | 0.0216 |
| 134 | 134 | 0.426 |
| 135 | 135 | 0.587 |
| 136 | 136 | 0.825 |
| 137 | 137 | 0.165 |
| 138 | 138 | 0.113 |
| 139 | 139 | 0.0393 |
| 14 | 14 | 0.924 |
| 140 | 140 | 0.255 |
| 141 | 141 | 0.357 |
| 142 | 142 | 0.568 |
| 143 | 143 | 0.633 |
| 144 | 144 | 0.551 |
| 145 | 145 | 0.386 |
| 146 | 146 | 0.00695 |
| 147 | 147 | 0.729 |
| 148 | 148 | 0.125 |
| 149 | 149 | 0.865 |
| 15 | 15 | 0.513 |
| 150 | 150 | 0.368 |
| 151 | 151 | 0.76 |
| 152 | 152 | 0.297 |
| 153 | 153 | 0.172 |
| 154 | 154 | 0.0436 |
| 155 | 155 | 0.215 |
| 156 | 156 | 0.388 |
| 157 | 157 | 0.425 |
| 158 | 158 | 0.15 |
| 159 | 159 | 0.969 |
| 16 | 16 | 0.888 |
| 160 | 160 | 0.0054 |
| 161 | 161 | 0.753 |
| 162 | 162 | 0.0376 |
| 163 | 163 | 0.437 |
| 164 | 164 | 0.371 |
| 165 | 165 | 0.0823 |
| 166 | 166 | 0.79 |
| 167 | 167 | 0.165 |
| 168 | 168 | 0.932 |
| 169 | 169 | 0.233 |
| 17 | 17 | 0.58 |
| 18 | 18 | 0.518 |
| 19 | 19 | 0.28 |
| 2 | 2 | 0.531 |
| 20 | 20 | 0.693 |
| 21 | 21 | 0.798 |
| 22 | 22 | 0.11 |
| 23 | 23 | 0.741 |
| 24 | 24 | 0.158 |
| 25 | 25 | 0.434 |
| 26 | 26 | 0.211 |
| 27 | 27 | 0.564 |
| 28 | 28 | 0.0574 |
| 29 | 29 | 0.565 |
| 3 | 3 | 0.647 |
| 30 | 30 | 0.0434 |
| 31 | 31 | 0.673 |
| 32 | 32 | 0.0207 |
| 33 | 33 | 0.592 |
| 34 | 34 | 0.104 |
| 35 | 35 | 0.34 |
| 36 | 36 | 0.781 |
| 37 | 37 | 0.823 |
| 38 | 38 | 0.542 |
| 39 | 39 | 0.51 |
| 4 | 4 | 0.341 |
| 40 | 40 | 0.0269 |
| 41 | 41 | 0.464 |
| 42 | 42 | 0.735 |
| 43 | 43 | 0.484 |
| 44 | 44 | 0.158 |
| 45 | 45 | 0.266 |
| 46 | 46 | 0.323 |
| 47 | 47 | 0.492 |
| 48 | 48 | 0.12 |
| 49 | 49 | 0.564 |
| 5 | 5 | 0.221 |
| 50 | 50 | 0.0516 |
| 51 | 51 | 0.457 |
| 52 | 52 | 0.688 |
| 53 | 53 | 0.444 |
| 54 | 54 | 0.489 |
| 55 | 55 | 0.657 |
| 56 | 56 | 0.235 |
| 57 | 57 | 0.696 |
| 58 | 58 | 0.0608 |
| 59 | 59 | 0.183 |
| 6 | 6 | 0.309 |
| 60 | 60 | 0.516 |
| 61 | 61 | 0.791 |
| 62 | 62 | 0.107 |
| 63 | 63 | 0.182 |
| 64 | 64 | 0.0603 |
| 65 | 65 | 0.178 |
| 66 | 66 | 0.0211 |
| 67 | 67 | 0.654 |
| 68 | 68 | 0.00512 |
| 69 | 69 | 0.0359 |
| 7 | 7 | 0.948 |
| 70 | 70 | 0.597 |
| 71 | 71 | 0.492 |
| 72 | 72 | 0.15 |
| 73 | 73 | 0.189 |
| 74 | 74 | 0.593 |
| 75 | 75 | 0.848 |
| 76 | 76 | 0.0999 |
| 77 | 77 | 0.178 |
| 78 | 78 | 0.369 |
| 79 | 79 | 0.628 |
| 8 | 8 | 0.0981 |
| 80 | 80 | 0.852 |
| 81 | 81 | 0.93 |
| 82 | 82 | 0.262 |
| 83 | 83 | 0.662 |
| 84 | 84 | 0.499 |
| 85 | 85 | 0.56 |
| 86 | 86 | 0.528 |
| 87 | 87 | 0.403 |
| 88 | 88 | 0.188 |
| 89 | 89 | 0.511 |
| 9 | 9 | 0.177 |
| 90 | 90 | 0.017 |
| 91 | 91 | 0.423 |
| 92 | 92 | 0.23 |
| 93 | 93 | 0.8 |
| 94 | 94 | 0.763 |
| 95 | 95 | 0.48 |
| 96 | 96 | 0.804 |
| 97 | 97 | 0.655 |
| 98 | 98 | 0.44 |
| 99 | 99 | 1.42904e-4 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11340
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0002367 (trabecular meshwork cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000020 (sense organ)
0002203 (vasculature of eye)
0001768 (uvea)
0001032 (sensory system)
0002049 (vasculature)
0002200 (vasculature of head)
0006876 (vasculature of organ)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0005969 (reticulum trabeculare)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0004535 (cardiovascular system)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)
0001009 (circulatory system)
0003956 (aqueous drainage system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000188 (human trabecular meshwork cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
