FF:11467-119B9: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00004831 | ||
|accession_numbers=CAGE;DRX008407;DRR009279;DRZ000704;DRZ002089 | |accession_numbers=CAGE;DRX008407;DRR009279;DRZ000704;DRZ002089;DRZ012054;DRZ013439 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000310,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0009569,UBERON:0001443,UBERON:0000915 | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000310,UBERON:0002100,UBERON:0002384,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0009569,UBERON:0001443,UBERON:0000915 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002580 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002334,CL:0002580 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|expression_enrichment_score=chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!2.20!158.29!HOXC5;;chr12:54402745..54402788,+!p1@HOXC8!1.86!71.95!HOXC8;;chr1:170632285..170632309,+!p1@PRRX1!1.67!51.85!PRRX1;;chr18:53068911..53068935,-!p4@TCF4!1.63!47.14!TCF4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.53!33.00!ZBED1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.48!29.52!HOXC5;;chr9:132427883..132427951,+!p2@PRRX2!1.45!27.29!PRRX2;;chr2:19558373..19558392,-!p1@OSR1!1.42!68.48!OSR1;;chr19:47523058..47523114,+!p1@NPAS1!1.34!21.09!NPAS1;;chr14:62162258..62162269,+!p2@HIF1A!1.26!162.51!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!1.26!88.57!HIF1A;;chr9:132427972..132428056,+!p1@PRRX2!1.26!22.33!PRRX2;;chrX:106960180..106960197,-!p2@TSC22D3!1.25!63.02!TSC22D3;;chr8:72756637..72756664,-!p3@MSC!1.25!19.10!MSC;;chr12:54402790..54402805,+!p2@HOXC8!1.22!15.63!HOXC8;;chr12:54393880..54393962,+!p1@HOXC9!1.21!15.13!HOXC9;;chr1:170633262..170633285,+!p3@PRRX1!1.20!17.12!PRRX1;;chr1:23885981..23886002,-!p1@ID3!1.18!2436.67!ID3;;chr8:25902876..25902936,-!p1@EBF2!1.18!14.14!EBF2;;chr12:54402729..54402743,+!p3@HOXC8!1.17!13.89!HOXC8;;chr1:170633058..170633084,+!p5@PRRX1!1.16!13.40!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!1.14!80.88!SNAI2;;chr2:119605214..119605230,-!p1@EN1!1.14!12.90!EN1;;chr1:170632959..170632987,+!p4@PRRX1!1.13!13.65!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.12!63.52!CREB3L1;;chr5:72744594..72744609,-!p1@FOXD1!1.12!56.32!FOXD1;;chr19:50432453..50432468,+!p1@ATF5!1.11!656.00!ATF5;;chr8:72756667..72756736,-!p2@MSC!1.11!18.61!MSC;;chr10:63809013..63809041,+!p3@ARID5B!1.10!64.76!ARID5B;;chr4:174450089..174450153,-!p2@HAND2!1.10!11.66!HAND2;;chr11:46299539..46299620,+!p2@CREB3L1!1.08!18.86!CREB3L1;;chr2:239756671..239756732,+!p1@TWIST2!1.07!34.98!TWIST2;;chr1:170633348..170633399,+!p2@PRRX1!1.06!14.39!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!1.06!10.42!PRRX1;;chr2:176994408..176994492,+!p1@HOXD8!1.06!10.42!HOXD8;;chr4:4861385..4861398,+!p1@MSX1!1.05!30.77!MSX1;;chr1:170632477..170632506,+!p6@PRRX1!1.04!9.92!PRRX1;;chr12:54410948..54410992,+!p3@HOXC5!1.04!9.92!HOXC5;;chr2:8822176..8822196,+!p1@ID2!1.03!1375.01!ID2;;chr18:19749386..19749404,+!p2@GATA6!1.03!13.89!GATA6;;chr12:54394309..54394336,+!p2@HOXC9!1.03!9.68!HOXC9;;chr19:13134772..13134822,+!p2@NFIX!1.01!13.89!NFIX;;chr7:27205136..27205164,-!p1@HOXA9!1.00!8.93!HOXA9;;chr2:239756739..239756755,+!p2@TWIST2!0.99!15.13!TWIST2;;chr6:144329384..144329405,-!p1@PLAGL1!0.98!101.72!PLAGL1;;chr2:119604456..119604501,-!p2@EN1!0.97!8.44!EN1;;chr1:170632683..170632696,+!p12@PRRX1!0.96!8.19!PRRX1;;chr15:96874145..96874166,+!p7@NR2F2!0.95!15.38!NR2F2;;chr17:46687959..46688007,-!p2@HOXB7!0.94!10.92!HOXB7;;chr14:95236551..95236576,-!p2@GSC!0.94!7.69!GSC;;chr1:170632250..170632277,+!p7@PRRX1!0.94!7.69!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.94!7.69!FOXS1;;chr2:85981027..85981047,+!p8@ATOH8!0.94!7.69!ATOH8;;chr4:111558135..111558198,-!p2@PITX2!0.94!7.69!PITX2;;chr8:72756213..72756243,-!p5@MSC!0.92!9.68!MSC;;chr8:72756267..72756296,-!p4@MSC!0.90!10.42!MSC;;chr15:96876966..96877017,+!p12@NR2F2!0.90!10.17!NR2F2;;chr6:28321909..28321965,-!p3@ZNF323!0.90!6.95!ZNF323;;chr7:27192185..27192209,-!p1@HOXA3!0.90!6.95!HOXA3;;chr4:174451370..174451387,-!p1@HAND2!0.89!6.70!HAND2;;chr15:96874244..96874259,+!p5@NR2F2!0.88!16.62!NR2F2;;chr3:157823517..157823562,-!p1@SHOX2!0.88!7.20!SHOX2;;chr13:37494275..37494304,-!p2@SMAD9!0.87!6.45!SMAD9;;chr8:49833978..49833996,-!p1@SNAI2!0.86!136.96!SNAI2;;chr10:77161504..77161530,-!p1@ZNF503!0.86!89.07!ZNF503;;chr18:19749541..19749557,+!p1@GATA6!0.86!20.59!GATA6;;chrX:106960221..106960236,-!p3@TSC22D3!0.85!17.62!TSC22D3;;chr7:150946015..150946070,-!p3@SMARCD3!0.85!13.65!SMARCD3;;chr14:62203595..62203676,+!p4@HIF1A!0.85!11.91!HIF1A;;chr12:80085061..80085119,-!p6@PAWR!0.85!9.92!PAWR;;chr3:170076314..170076334,+!p2@SKIL!0.85!8.19!SKIL;;chr8:72756063..72756125,-!p1@MSC!0.84!12.65!MSC;;chr10:131762504..131762555,-!p1@EBF3!0.84!5.95!EBF3;;chr10:119303078..119303169,+!p2@EMX2!0.83!5.71!EMX2;;chr12:54447686..54447704,+!p5@HOXC4!0.83!5.71!HOXC4;;chr10:63809077..63809089,+!p5@ARID5B!0.82!12.65!ARID5B;;chr10:63809106..63809127,+!p1@ARID5B!0.81!79.89!ARID5B;;chr17:38498594..38498661,+!p2@RARA!0.81!19.60!RARA;;chr12:48298765..48298783,-!p2@VDR!0.81!11.91!VDR;;chr2:85980951..85981004,+!p1@ATOH8!0.81!9.18!ATOH8;;chr14:95236440..95236465,-!p1@GSC!0.81!5.46!GSC;;chr7:27205106..27205134,-!p2@HOXA9!0.81!5.46!HOXA9;;chr13:45151259..45151326,-!p2@TSC22D1!0.79!33.49!TSC22D1;;chr6:28321971..28321995,-!p1@ZNF323!0.79!5.21!ZNF323;;chr1:75600067..75600094,+!p2@LHX8!0.79!5.21!LHX8;;chr12:57914286..57914304,-!p1@DDIT3!0.78!201.22!DDIT3;;chr14:75894714..75894733,+!p1@JDP2!0.78!154.57!JDP2;;chr15:96869255..96869291,+!p6@NR2F2!0.78!9.68!NR2F2;;chr5:158526459..158526481,-!p2@EBF1!0.78!6.95!EBF1;;chr5:2751762..2751784,-!p1@IRX2!0.78!4.96!IRX2;;chr7:1577899..1577943,+!p3@MAFK!0.78!4.96!MAFK;;chr10:114889016..114889037,+!p15@TCF7L2!0.78!4.96!TCF7L2;;chr17:46682321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| |expression_enrichment_score=chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!2.20!158.29!HOXC5;;chr12:54402745..54402788,+!p1@HOXC8!1.86!71.95!HOXC8;;chr1:170632285..170632309,+!p1@PRRX1!1.67!51.85!PRRX1;;chr18:53068911..53068935,-!p4@TCF4!1.63!47.14!TCF4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.53!33.00!ZBED1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.48!29.52!HOXC5;;chr9:132427883..132427951,+!p2@PRRX2!1.45!27.29!PRRX2;;chr2:19558373..19558392,-!p1@OSR1!1.42!68.48!OSR1;;chr19:47523058..47523114,+!p1@NPAS1!1.34!21.09!NPAS1;;chr14:62162258..62162269,+!p2@HIF1A!1.26!162.51!HIF1A;;chr14:62162285..62162296,+!p3@HIF1A!1.26!88.57!HIF1A;;chr9:132427972..132428056,+!p1@PRRX2!1.26!22.33!PRRX2;;chrX:106960180..106960197,-!p2@TSC22D3!1.25!63.02!TSC22D3;;chr8:72756637..72756664,-!p3@MSC!1.25!19.10!MSC;;chr12:54402790..54402805,+!p2@HOXC8!1.22!15.63!HOXC8;;chr12:54393880..54393962,+!p1@HOXC9!1.21!15.13!HOXC9;;chr1:170633262..170633285,+!p3@PRRX1!1.20!17.12!PRRX1;;chr1:23885981..23886002,-!p1@ID3!1.18!2436.67!ID3;;chr8:25902876..25902936,-!p1@EBF2!1.18!14.14!EBF2;;chr12:54402729..54402743,+!p3@HOXC8!1.17!13.89!HOXC8;;chr1:170633058..170633084,+!p5@PRRX1!1.16!13.40!PRRX1;;chr8:49833948..49833973,-!p2@SNAI2!1.14!80.88!SNAI2;;chr2:119605214..119605230,-!p1@EN1!1.14!12.90!EN1;;chr1:170632959..170632987,+!p4@PRRX1!1.13!13.65!PRRX1;;chr11:46299199..46299233,+!p1@CREB3L1!1.12!63.52!CREB3L1;;chr5:72744594..72744609,-!p1@FOXD1!1.12!56.32!FOXD1;;chr19:50432453..50432468,+!p1@ATF5!1.11!656.00!ATF5;;chr8:72756667..72756736,-!p2@MSC!1.11!18.61!MSC;;chr10:63809013..63809041,+!p3@ARID5B!1.10!64.76!ARID5B;;chr4:174450089..174450153,-!p2@HAND2!1.10!11.66!HAND2;;chr11:46299539..46299620,+!p2@CREB3L1!1.08!18.86!CREB3L1;;chr2:239756671..239756732,+!p1@TWIST2!1.07!34.98!TWIST2;;chr1:170633348..170633399,+!p2@PRRX1!1.06!14.39!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!1.06!10.42!PRRX1;;chr2:176994408..176994492,+!p1@HOXD8!1.06!10.42!HOXD8;;chr4:4861385..4861398,+!p1@MSX1!1.05!30.77!MSX1;;chr1:170632477..170632506,+!p6@PRRX1!1.04!9.92!PRRX1;;chr12:54410948..54410992,+!p3@HOXC5!1.04!9.92!HOXC5;;chr2:8822176..8822196,+!p1@ID2!1.03!1375.01!ID2;;chr18:19749386..19749404,+!p2@GATA6!1.03!13.89!GATA6;;chr12:54394309..54394336,+!p2@HOXC9!1.03!9.68!HOXC9;;chr19:13134772..13134822,+!p2@NFIX!1.01!13.89!NFIX;;chr7:27205136..27205164,-!p1@HOXA9!1.00!8.93!HOXA9;;chr2:239756739..239756755,+!p2@TWIST2!0.99!15.13!TWIST2;;chr6:144329384..144329405,-!p1@PLAGL1!0.98!101.72!PLAGL1;;chr2:119604456..119604501,-!p2@EN1!0.97!8.44!EN1;;chr1:170632683..170632696,+!p12@PRRX1!0.96!8.19!PRRX1;;chr15:96874145..96874166,+!p7@NR2F2!0.95!15.38!NR2F2;;chr17:46687959..46688007,-!p2@HOXB7!0.94!10.92!HOXB7;;chr14:95236551..95236576,-!p2@GSC!0.94!7.69!GSC;;chr1:170632250..170632277,+!p7@PRRX1!0.94!7.69!PRRX1;;chr20:30433396..30433414,-!p1@FOXS1!0.94!7.69!FOXS1;;chr2:85981027..85981047,+!p8@ATOH8!0.94!7.69!ATOH8;;chr4:111558135..111558198,-!p2@PITX2!0.94!7.69!PITX2;;chr8:72756213..72756243,-!p5@MSC!0.92!9.68!MSC;;chr8:72756267..72756296,-!p4@MSC!0.90!10.42!MSC;;chr15:96876966..96877017,+!p12@NR2F2!0.90!10.17!NR2F2;;chr6:28321909..28321965,-!p3@ZNF323!0.90!6.95!ZNF323;;chr7:27192185..27192209,-!p1@HOXA3!0.90!6.95!HOXA3;;chr4:174451370..174451387,-!p1@HAND2!0.89!6.70!HAND2;;chr15:96874244..96874259,+!p5@NR2F2!0.88!16.62!NR2F2;;chr3:157823517..157823562,-!p1@SHOX2!0.88!7.20!SHOX2;;chr13:37494275..37494304,-!p2@SMAD9!0.87!6.45!SMAD9;;chr8:49833978..49833996,-!p1@SNAI2!0.86!136.96!SNAI2;;chr10:77161504..77161530,-!p1@ZNF503!0.86!89.07!ZNF503;;chr18:19749541..19749557,+!p1@GATA6!0.86!20.59!GATA6;;chrX:106960221..106960236,-!p3@TSC22D3!0.85!17.62!TSC22D3;;chr7:150946015..150946070,-!p3@SMARCD3!0.85!13.65!SMARCD3;;chr14:62203595..62203676,+!p4@HIF1A!0.85!11.91!HIF1A;;chr12:80085061..80085119,-!p6@PAWR!0.85!9.92!PAWR;;chr3:170076314..170076334,+!p2@SKIL!0.85!8.19!SKIL;;chr8:72756063..72756125,-!p1@MSC!0.84!12.65!MSC;;chr10:131762504..131762555,-!p1@EBF3!0.84!5.95!EBF3;;chr10:119303078..119303169,+!p2@EMX2!0.83!5.71!EMX2;;chr12:54447686..54447704,+!p5@HOXC4!0.83!5.71!HOXC4;;chr10:63809077..63809089,+!p5@ARID5B!0.82!12.65!ARID5B;;chr10:63809106..63809127,+!p1@ARID5B!0.81!79.89!ARID5B;;chr17:38498594..38498661,+!p2@RARA!0.81!19.60!RARA;;chr12:48298765..48298783,-!p2@VDR!0.81!11.91!VDR;;chr2:85980951..85981004,+!p1@ATOH8!0.81!9.18!ATOH8;;chr14:95236440..95236465,-!p1@GSC!0.81!5.46!GSC;;chr7:27205106..27205134,-!p2@HOXA9!0.81!5.46!HOXA9;;chr13:45151259..45151326,-!p2@TSC22D1!0.79!33.49!TSC22D1;;chr6:28321971..28321995,-!p1@ZNF323!0.79!5.21!ZNF323;;chr1:75600067..75600094,+!p2@LHX8!0.79!5.21!LHX8;;chr12:57914286..57914304,-!p1@DDIT3!0.78!201.22!DDIT3;;chr14:75894714..75894733,+!p1@JDP2!0.78!154.57!JDP2;;chr15:96869255..96869291,+!p6@NR2F2!0.78!9.68!NR2F2;;chr5:158526459..158526481,-!p2@EBF1!0.78!6.95!EBF1;;chr5:2751762..2751784,-!p1@IRX2!0.78!4.96!IRX2;;chr7:1577899..1577943,+!p3@MAFK!0.78!4.96!MAFK;;chr10:114889016..114889037,+!p15@TCF7L2!0.78!4.96!TCF7L2;;chr17:46682321..46682362,-!p1@HOXB6!0.78!4.96!HOXB6;;chr15:96874012..96874042,+!p2@NR2F2!0.77!48.63!NR2F2;;chr5:72744445..72744466,-!p2@FOXD1!0.77!8.44!FOXD1;;chr2:121493425..121493474,+!p1@GLI2!0.76!11.16!GLI2;;chr6:85473156..85473210,-!p2@TBX18!0.76!5.95!TBX18;;chr2:85981073..85981091,+!p5@ATOH8!0.76!4.71!ATOH8;;chr4:111544219..111544240,-!p1@PITX2!0.76!4.71!PITX2;;chr17:46132044..46132080,+!p4@NFE2L1!0.76!4.71!NFE2L1;;chr18:53070846..53070902,-!p6@TCF4!0.76!4.71!TCF4;;chr10:31610110..31610159,+!p2@ZEB1!0.76!4.71!ZEB1;;chr17:1959369..1959388,+!p2@HIC1!0.75!13.15!HIC1;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.74!49.87!GLIS2;;chr5:158526917..158526932,-!p1@EBF1!0.74!12.16!EBF1;;chr14:62213827..62213853,+!p6@HIF1A!0.74!6.70!HIF1A;;chr12:10870927..10870966,-!p5@CSDA!0.74!4.47!CSDA;;chr12:54422245..54422263,+!p7@HOXC6!0.74!4.47!HOXC6;;chr12:54447637..54447659,+!p4@HOXC4!0.74!4.47!HOXC4;;chr2:85981107..85981120,+!p3@ATOH8!0.74!4.47!ATOH8;;chr14:62162224..62162254,+!p1@HIF1A!0.73!708.35!HIF1A;;chr20:30193083..30193098,+!p1@ID1!0.73!400.20!ID1;;chr11:12696071..12696086,+!p3@TEAD1!0.73!5.95!TEAD1;;chr6:19837592..19837621,+!p1@ID4!0.72!28.78!ID4;;chr17:46621937..46621966,-!p2@HOXB2!0.72!12.65!HOXB2;;chr2:85981222..85981259,+!p2@ATOH8!0.72!7.44!ATOH8;;chr16:31076332..31076388,-!p3@ZNF668!0.72!4.22!ZNF668;;chr8:72755987..72756002,-!p7@MSC!0.72!4.22!MSC;;chr1:170632137..170632172,+!p10@PRRX1!0.72!4.22!PRRX1;;chr12:54422217..54422239,+!p3@HOXC6!0.72!4.22!HOXC6;;chr8:106330656..106330684,+!p1@ZFPM2!0.70!11.41!ZFPM2;;chr12:54402694..54402705,+!p5@HOXC8!0.70!3.97!HOXC8;;chr10:63853436..63853442,+!p4@ARID5B!0.69!23.82!ARID5B;;chr15:96873984..96873999,+!p3@NR2F2!0.68!32.01!NR2F2;;chr2:121493492..121493537,+!p2@GLI2!0.68!6.70!GLI2;;chr8:73921136..73921151,+!p2@TERF1!0.67!5.95!TERF1;;chr9:110250697..110250738,-!p2@KLF4!0.67!4.47!KLF4;;chr8:93074803..93074845,-!p1@RUNX1T1!0.67!3.72!RUNX1T1;;chr10:31607811..31607837,+!p6@ZEB1!0.67!3.72!ZEB1;;chr18:53068940..53068951,-!p21@TCF4!0.67!3.72!TCF4;;chr5:139487608..139487663,+!p3@PURA!0.66!8.44!PURA;;chr6:85474299..85474324,-!p1@TBX18!0.66!6.95!TBX18;;chr10:64134120..64134183,+!p1@ZNF365!0.66!4.47!ZNF365;;chr8:77593474..77593612,+!p1@ZFHX4!0.65!16.87!ZFHX4;;chr7:19157248..19157268,-!p1@TWIST1!0.65!10.92!TWIST1;;chr6:144289132..144289134,-!p3@PLAGL1!0.65!8.93!PLAGL1;;chr14:62203749..62203798,+!p5@HIF1A!0.65!5.71!HIF1A;;chr6:1389789..1389821,+!p1@FOXF2!0.65!4.96!FOXF2;;chr7:27196267..27196311,-!p1@HOXA7!0.65!3.47!HOXA7;;chr1:119530493..119530572,-!p1@TBX15!0.65!3.47!TBX15;;chr5:92918919..92918942,+!p1@NR2F1!0.63!17.12!NR2F1;;chr19:47922750..47922795,-!p1@MEIS3!0.63!5.71!MEIS3;;chr1:170632867..170632878,+!p21@PRRX1!0.63!3.23!PRRX1;;chr10:114889045..114889074,+!p12@TCF7L2!0.63!3.23!TCF7L2;;chr12:114843940..114843955,-!p2@TBX5!0.63!3.23!TBX5;;chr12:54394416..54394467,+!p5@HOXC9!0.63!3.23!HOXC9;;chr2:178129853..178129860,-!p14@NFE2L2!0.63!3.23!NFE2L2;;chr2:85981008..85981025,+!p7@ATOH8!0.63!3.23!ATOH8;;chr17:46687935..46687950,-!p3@HOXB7!0.63!3.23!HOXB7;;chr8:81787006..81787031,-!p2@ZNF704!0.63!3.23!ZNF704;;chr17:3571863..3571881,-!p1@TAX1BP3!0.62!270.19!TAX1BP3;;chr6:126102292..126102329,+!p3@NCOA7!0.62!12.16!NCOA7;;chr17:46688334..46688385,-!p1@HOXB7!0.62!4.96!HOXB7;;chr10:63809090..63809097,+!p7@ARID5B!0.62!4.71!ARID5B;;chr17:46675420..46675465,-!p3@HOXB6!0.62!3.72!HOXB6;;chr17:46126136..46126152,+!p1@NFE2L1!0.60!188.07!NFE2L1;;chr15:96874216..96874236,+!p13@NR2F2!0.60!4.96!NR2F2;;chr18:53068893..53068902,-!p28@TCF4!0.60!2.98!TCF4;;chr19:13135386..13135435,+!p4@NFIX!0.60!2.98!NFIX;;chr1:170632115..170632136,+!p9@PRRX1!0.60!2.98!PRRX1;;chr5:139492456..139492489,+!p7@PURA!0.60!2.98!PURA;;chr6:1389989..1390019,+!p2@FOXF2!0.60!2.98!FOXF2;;chr6:32095523..32095564,-!p2@ATF6B!0.59!4.22!ATF6B;;chr19:58011258..58011317,+!p1@ZNF773!0.58!26.05!ZNF773;;chr3:178789522..178789564,-!p2@ZMAT3!0.58!24.81!ZMAT3;;chr7:44143978..44143989,+!p2@AEBP1!0.58!5.71!AEBP1;;chr18:46475696..46475713,-!p1@SMAD7!0.58!3.23!SMAD7;;chr2:208030647..208030689,-!p1@KLF7!0.57!27.79!KLF7;;chr12:48298785..48298828,-!p1@VDR!0.57!17.62!VDR;;chr3:71630980..71631110,-!p3@FOXP1!0.57!11.41!FOXP1;;chr1:158979872..158979898,+!p3@IFI16!0.57!9.92!IFI16;;chr19:13134457..13134462,+!p5@NFIX!0.57!5.46!NFIX;;chr14:62193465..62193490,+!p7@HIF1A!0.57!4.22!HIF1A;;chr11:46299443..46299459,+!p4@CREB3L1!0.57!2.73!CREB3L1;;chr7:27196217..27196246,-!p2@HOXA7!0.57!2.73!HOXA7;;chr8:72756194..72756208,-!p9@MSC!0.57!2.73!MSC;;chr8:72756380..72756427,-!p8@MSC!0.57!2.73!MSC;;chr8:77593750..77593757,+!p3@ZFHX4!0.57!2.73!ZFHX4;;chr1:170632439..170632465,+!p11@PRRX1!0.57!2.73!PRRX1;;chr1:170633100..170633112,+!p19@PRRX1!0.57!2.73!PRRX1;;chr14:61116183..61116208,-!p1@SIX1!0.56!11.91!SIX1;;chr7:44143925..44143970,+!p1@AEBP1!0.55!72.20!AEBP1;;chr6:21597765..21597779,+!p2@SOX4!0.55!25.56!SOX4;;chr3:71007344..71007348,-!p6@FOXP1!0.55!12.41!FOXP1;;chr5:178368186..178368238,+!p1@ZNF454!0.55!5.21!ZNF454;;chrX:106960249..106960260,-!p5@TSC22D3!0.55!4.47!TSC22D3;;chr3:1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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002334;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002580;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000310 | |||
|ffid_belonging_in_development=CL:0000134 | |ffid_belonging_in_development=CL:0000134 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 41: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520breast%252c%2520donor1.CNhs11052.11467-119B9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520breast%252c%2520donor1.CNhs11052.11467-119B9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520breast%252c%2520donor1.CNhs11052.11467-119B9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520breast%252c%2520donor1.CNhs11052.11467-119B9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Preadipocyte%2520-%2520breast%252c%2520donor1.CNhs11052.11467-119B9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11467-119B9 | |id=FF:11467-119B9 | ||
|is_a=EFO:0002091;;FF:0000139 | |is_a=EFO:0002091;;FF:0000139 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs11052 | |library_id=CNhs11052 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs11052 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11467 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11467 | |||
|name=Preadipocyte - breast, donor1 | |name=Preadipocyte - breast, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
Line 51: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11052,LSID722,release008,COMPLETED | |profile_hcage=CNhs11052,LSID722,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10005,,, | |profile_srnaseq=SRhi10005,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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Line 90: | Line 101: | ||
|top_motifs=TAL1_TCF{3,4,12}:2.30011083278;ESR1:2.13064480596;FOXL1:2.04688233633;MAFB:1.83541772759;HES1:1.83364961619;HIF1A:1.75590804371;NKX3-1:1.74034517097;EVI1:1.7188530671;XBP1:1.67620552687;GLI1..3:1.62110225193;NKX2-2,8:1.61822564336;UFEwm:1.4717402079;TEAD1:1.46581773686;GZF1:1.44157635792;IKZF1:1.42533079718;TEF:1.41070068418;ATF6:1.38076560952;MYBL2:1.35350515094;NFE2L1:1.34433741389;TP53:1.30409848634;ZNF238:1.23337026981;SPZ1:1.21700912473;HMX1:1.20462048763;TFAP4:1.20392499737;EBF1:1.19452279883;HOX{A4,D4}:1.19210945373;PAX1,9:1.1644392773;FOXA2:1.13703088849;EN1,2:1.11514012812;HOX{A6,A7,B6,B7}:1.09786137983;HOX{A5,B5}:1.05553309236;NFIX:1.0516822186;ALX4:1.0404466824;NANOG{mouse}:1.00786157961;SMAD1..7,9:1.00178608862;ZNF423:0.984223079687;RXRA_VDR{dimer}:0.943366576075;HBP1_HMGB_SSRP1_UBTF:0.933810835039;GCM1,2:0.925525861248;ADNP_IRX_SIX_ZHX:0.922386780606;HMGA1,2:0.891660231001;NR3C1:0.839358963399;HLF:0.827086880273;NKX3-2:0.819671031155;TLX1..3_NFIC{dimer}:0.81532720657;RXR{A,B,G}:0.810031326605;KLF4:0.79333487489;NHLH1,2:0.792342644448;NFATC1..3:0.764625236757;LHX3,4:0.759726964276;MTE{core}:0.756116140944;SRF:0.73098349857;NR6A1:0.705629330751;HAND1,2:0.651229214727;TBX4,5:0.630095927721;TFAP2B:0.624608182529;HSF1,2:0.619258845456;FOXO1,3,4:0.6049451768;PAX5:0.599002475608;MAZ:0.58713224577;HIC1:0.584556915003;GFI1B:0.570844628647;GTF2I:0.545420036737;bHLH_family:0.518831262138;NKX2-1,4:0.4936770375;ZNF148:0.490868271136;SOX17:0.479931487145;FOX{I1,J2}:0.467660490936;TFAP2{A,C}:0.451562033572;MEF2{A,B,C,D}:0.44479204827;TFCP2:0.437673167534;GTF2A1,2:0.384033313546;NFE2L2:0.368739566663;AR:0.354098189822;SOX5:0.336710428395;MYFfamily:0.316633070006;STAT2,4,6:0.299200815046;DBP:0.276661134264;ARID5B:0.249901415387;ZNF384:0.234001096985;TBP:0.225824881476;GATA4:0.16560573351;MZF1:0.164943689521;CEBPA,B_DDIT3:0.160869421382;MTF1:0.156998974215;POU6F1:0.152472588316;PATZ1:0.0975206427427;CDC5L:0.0894561610996;ZIC1..3:0.0685403240323;SREBF1,2:0.0680189777099;TLX2:0.0489085083643;FOX{D1,D2}:0.0348831418846;REST:0.0345114674332;TGIF1:0.00107967198847;AHR_ARNT_ARNT2:-0.000547257064979;PAX8:-0.00774659574681;BACH2:-0.015012547808;PRDM1:-0.0385580879406;T:-0.0444005458151;ELK1,4_GABP{A,B1}:-0.0571965272814;MYB:-0.0613790106189;HNF1A:-0.0671770835804;PAX2:-0.0764021874152;RREB1:-0.0985130513319;ZBTB6:-0.115627995227;FOSL2:-0.118772388983;PAX4:-0.135570573942;EP300:-0.145427230912;AIRE:-0.157565574876;MED-1{core}:-0.168765769352;XCPE1{core}:-0.169320207893;IRF1,2:-0.187470103515;OCT4_SOX2{dimer}:-0.18869837554;STAT5{A,B}:-0.189414295678;STAT1,3:-0.219695166665;FOS_FOS{B,L1}_JUN{B,D}:-0.236681484022;LEF1_TCF7_TCF7L1,2:-0.237587383556;SOX2:-0.257367115565;ZNF143:-0.260026354705;YY1:-0.307948933911;DMAP1_NCOR{1,2}_SMARC:-0.308691183197;NRF1:-0.316363899644;FOXP3:-0.32196893261;NFIL3:-0.323118861806;HNF4A_NR2F1,2:-0.32713811571;PAX6:-0.332414970387;EGR1..3:-0.332503910592;RFX1:-0.338013780198;BPTF:-0.341382585793;RUNX1..3:-0.3612383755;ETS1,2:-0.367929678411;ZBTB16:-0.372960848282;JUN:-0.39548932587;NFE2:-0.399066004229;FOXN1:-0.428552848981;HOXA9_MEIS1:-0.453782184413;CRX:-0.48370278481;ATF2:-0.49770536931;CREB1:-0.498624134122;ATF5_CREB3:-0.500486398088;SPI1:-0.50262300104;VSX1,2:-0.503425262861;FOXM1:-0.517372025891;IKZF2:-0.52401504462;NKX2-3_NKX2-5:-0.53160481101;NR5A1,2:-0.54515854766;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.558839055526;FOXD3:-0.562409167311;NKX6-1,2:-0.574523271615;ESRRA:-0.576178428577;ELF1,2,4:-0.587036083886;TOPORS:-0.595075809783;POU3F1..4:-0.595598450695;ZFP161:-0.595793999432;GFI1:-0.597770192806;GATA6:-0.600885467333;NFKB1_REL_RELA:-0.609209537973;FOXQ1:-0.627369339093;CUX2:-0.635031141073;ZEB1:-0.640870802606;PPARG:-0.669669623123;ATF4:-0.69038591637;SPIB:-0.696702759628;PRRX1,2:-0.715632070173;TFDP1:-0.718593075545;NANOG:-0.729428024017;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.730782596868;ONECUT1,2:-0.731190331761;SNAI1..3:-0.760691127783;NR1H4:-0.771199602098;FOX{F1,F2,J1}:-0.787657848441;POU5F1:-0.798940680155;PITX1..3:-0.809321549208;SP1:-0.819104994383;FOXP1:-0.844445629335;IRF7:-0.878392795424;RFX2..5_RFXANK_RFXAP:-0.899107963924;BREu{core}:-0.953509914614;SOX{8,9,10}:-0.99225073022;POU1F1:-0.994725278098;ALX1:-1.10508275849;LMO2:-1.10768367173;MYOD1:-1.13016284653;CDX1,2,4:-1.15691214693;RORA:-1.16758976972;E2F1..5:-1.19749310518;PAX3,7:-1.20897934447;RBPJ:-1.21225001129;PDX1:-1.24707589044;NFY{A,B,C}:-1.35958085044;PBX1:-1.7848191378;POU2F1..3:-2.11863237858 | |top_motifs=TAL1_TCF{3,4,12}:2.30011083278;ESR1:2.13064480596;FOXL1:2.04688233633;MAFB:1.83541772759;HES1:1.83364961619;HIF1A:1.75590804371;NKX3-1:1.74034517097;EVI1:1.7188530671;XBP1:1.67620552687;GLI1..3:1.62110225193;NKX2-2,8:1.61822564336;UFEwm:1.4717402079;TEAD1:1.46581773686;GZF1:1.44157635792;IKZF1:1.42533079718;TEF:1.41070068418;ATF6:1.38076560952;MYBL2:1.35350515094;NFE2L1:1.34433741389;TP53:1.30409848634;ZNF238:1.23337026981;SPZ1:1.21700912473;HMX1:1.20462048763;TFAP4:1.20392499737;EBF1:1.19452279883;HOX{A4,D4}:1.19210945373;PAX1,9:1.1644392773;FOXA2:1.13703088849;EN1,2:1.11514012812;HOX{A6,A7,B6,B7}:1.09786137983;HOX{A5,B5}:1.05553309236;NFIX:1.0516822186;ALX4:1.0404466824;NANOG{mouse}:1.00786157961;SMAD1..7,9:1.00178608862;ZNF423:0.984223079687;RXRA_VDR{dimer}:0.943366576075;HBP1_HMGB_SSRP1_UBTF:0.933810835039;GCM1,2:0.925525861248;ADNP_IRX_SIX_ZHX:0.922386780606;HMGA1,2:0.891660231001;NR3C1:0.839358963399;HLF:0.827086880273;NKX3-2:0.819671031155;TLX1..3_NFIC{dimer}:0.81532720657;RXR{A,B,G}:0.810031326605;KLF4:0.79333487489;NHLH1,2:0.792342644448;NFATC1..3:0.764625236757;LHX3,4:0.759726964276;MTE{core}:0.756116140944;SRF:0.73098349857;NR6A1:0.705629330751;HAND1,2:0.651229214727;TBX4,5:0.630095927721;TFAP2B:0.624608182529;HSF1,2:0.619258845456;FOXO1,3,4:0.6049451768;PAX5:0.599002475608;MAZ:0.58713224577;HIC1:0.584556915003;GFI1B:0.570844628647;GTF2I:0.545420036737;bHLH_family:0.518831262138;NKX2-1,4:0.4936770375;ZNF148:0.490868271136;SOX17:0.479931487145;FOX{I1,J2}:0.467660490936;TFAP2{A,C}:0.451562033572;MEF2{A,B,C,D}:0.44479204827;TFCP2:0.437673167534;GTF2A1,2:0.384033313546;NFE2L2:0.368739566663;AR:0.354098189822;SOX5:0.336710428395;MYFfamily:0.316633070006;STAT2,4,6:0.299200815046;DBP:0.276661134264;ARID5B:0.249901415387;ZNF384:0.234001096985;TBP:0.225824881476;GATA4:0.16560573351;MZF1:0.164943689521;CEBPA,B_DDIT3:0.160869421382;MTF1:0.156998974215;POU6F1:0.152472588316;PATZ1:0.0975206427427;CDC5L:0.0894561610996;ZIC1..3:0.0685403240323;SREBF1,2:0.0680189777099;TLX2:0.0489085083643;FOX{D1,D2}:0.0348831418846;REST:0.0345114674332;TGIF1:0.00107967198847;AHR_ARNT_ARNT2:-0.000547257064979;PAX8:-0.00774659574681;BACH2:-0.015012547808;PRDM1:-0.0385580879406;T:-0.0444005458151;ELK1,4_GABP{A,B1}:-0.0571965272814;MYB:-0.0613790106189;HNF1A:-0.0671770835804;PAX2:-0.0764021874152;RREB1:-0.0985130513319;ZBTB6:-0.115627995227;FOSL2:-0.118772388983;PAX4:-0.135570573942;EP300:-0.145427230912;AIRE:-0.157565574876;MED-1{core}:-0.168765769352;XCPE1{core}:-0.169320207893;IRF1,2:-0.187470103515;OCT4_SOX2{dimer}:-0.18869837554;STAT5{A,B}:-0.189414295678;STAT1,3:-0.219695166665;FOS_FOS{B,L1}_JUN{B,D}:-0.236681484022;LEF1_TCF7_TCF7L1,2:-0.237587383556;SOX2:-0.257367115565;ZNF143:-0.260026354705;YY1:-0.307948933911;DMAP1_NCOR{1,2}_SMARC:-0.308691183197;NRF1:-0.316363899644;FOXP3:-0.32196893261;NFIL3:-0.323118861806;HNF4A_NR2F1,2:-0.32713811571;PAX6:-0.332414970387;EGR1..3:-0.332503910592;RFX1:-0.338013780198;BPTF:-0.341382585793;RUNX1..3:-0.3612383755;ETS1,2:-0.367929678411;ZBTB16:-0.372960848282;JUN:-0.39548932587;NFE2:-0.399066004229;FOXN1:-0.428552848981;HOXA9_MEIS1:-0.453782184413;CRX:-0.48370278481;ATF2:-0.49770536931;CREB1:-0.498624134122;ATF5_CREB3:-0.500486398088;SPI1:-0.50262300104;VSX1,2:-0.503425262861;FOXM1:-0.517372025891;IKZF2:-0.52401504462;NKX2-3_NKX2-5:-0.53160481101;NR5A1,2:-0.54515854766;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.558839055526;FOXD3:-0.562409167311;NKX6-1,2:-0.574523271615;ESRRA:-0.576178428577;ELF1,2,4:-0.587036083886;TOPORS:-0.595075809783;POU3F1..4:-0.595598450695;ZFP161:-0.595793999432;GFI1:-0.597770192806;GATA6:-0.600885467333;NFKB1_REL_RELA:-0.609209537973;FOXQ1:-0.627369339093;CUX2:-0.635031141073;ZEB1:-0.640870802606;PPARG:-0.669669623123;ATF4:-0.69038591637;SPIB:-0.696702759628;PRRX1,2:-0.715632070173;TFDP1:-0.718593075545;NANOG:-0.729428024017;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.730782596868;ONECUT1,2:-0.731190331761;SNAI1..3:-0.760691127783;NR1H4:-0.771199602098;FOX{F1,F2,J1}:-0.787657848441;POU5F1:-0.798940680155;PITX1..3:-0.809321549208;SP1:-0.819104994383;FOXP1:-0.844445629335;IRF7:-0.878392795424;RFX2..5_RFXANK_RFXAP:-0.899107963924;BREu{core}:-0.953509914614;SOX{8,9,10}:-0.99225073022;POU1F1:-0.994725278098;ALX1:-1.10508275849;LMO2:-1.10768367173;MYOD1:-1.13016284653;CDX1,2,4:-1.15691214693;RORA:-1.16758976972;E2F1..5:-1.19749310518;PAX3,7:-1.20897934447;RBPJ:-1.21225001129;PDX1:-1.24707589044;NFY{A,B,C}:-1.35958085044;PBX1:-1.7848191378;POU2F1..3:-2.11863237858 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11467-119B9;search_select_hide=table117:FF:11467-119B9 | |||
}} | }} |
Latest revision as of 18:03, 4 June 2020
Name: | Preadipocyte - breast, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs11052 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11052
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11052
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.819 |
10 | 10 | 0.512 |
100 | 100 | 0.516 |
101 | 101 | 0.536 |
102 | 102 | 0.0718 |
103 | 103 | 0.597 |
104 | 104 | 0.579 |
105 | 105 | 0.168 |
106 | 106 | 0.149 |
107 | 107 | 0.277 |
108 | 108 | 0.259 |
109 | 109 | 0.586 |
11 | 11 | 0.892 |
110 | 110 | 0.967 |
111 | 111 | 0.814 |
112 | 112 | 0.28 |
113 | 113 | 0.107 |
114 | 114 | 0.0394 |
115 | 115 | 0.151 |
116 | 116 | 0.198 |
117 | 117 | 0.603 |
118 | 118 | 0.174 |
119 | 119 | 0.952 |
12 | 12 | 0.474 |
120 | 120 | 0.95 |
121 | 121 | 0.651 |
122 | 122 | 0.394 |
123 | 123 | 0.0118 |
124 | 124 | 0.741 |
125 | 125 | 0.854 |
126 | 126 | 0.486 |
127 | 127 | 0.434 |
128 | 128 | 0.559 |
129 | 129 | 0.941 |
13 | 13 | 0.622 |
130 | 130 | 0.915 |
131 | 131 | 0.299 |
132 | 132 | 0.467 |
133 | 133 | 0.324 |
134 | 134 | 0.349 |
135 | 135 | 0.526 |
136 | 136 | 0.739 |
137 | 137 | 0.727 |
138 | 138 | 0.395 |
139 | 139 | 0.117 |
14 | 14 | 0.202 |
140 | 140 | 0.853 |
141 | 141 | 0.899 |
142 | 142 | 0.645 |
143 | 143 | 0.447 |
144 | 144 | 0.673 |
145 | 145 | 0.642 |
146 | 146 | 0.93 |
147 | 147 | 0.266 |
148 | 148 | 0.841 |
149 | 149 | 5.42627e-5 |
15 | 15 | 0.683 |
150 | 150 | 0.53 |
151 | 151 | 0.519 |
152 | 152 | 0.017 |
153 | 153 | 0.0322 |
154 | 154 | 0.944 |
155 | 155 | 0.00213 |
156 | 156 | 0.487 |
157 | 157 | 0.568 |
158 | 158 | 0.0217 |
159 | 159 | 0.414 |
16 | 16 | 0.0228 |
160 | 160 | 0.742 |
161 | 161 | 0.501 |
162 | 162 | 0.686 |
163 | 163 | 0.288 |
164 | 164 | 0.564 |
165 | 165 | 0.911 |
166 | 166 | 0.213 |
167 | 167 | 0.579 |
168 | 168 | 0.393 |
169 | 169 | 0.0351 |
17 | 17 | 0.5 |
18 | 18 | 0.0683 |
19 | 19 | 0.0162 |
2 | 2 | 0.382 |
20 | 20 | 0.321 |
21 | 21 | 0.472 |
22 | 22 | 0.21 |
23 | 23 | 0.0904 |
24 | 24 | 0.109 |
25 | 25 | 0.474 |
26 | 26 | 0.777 |
27 | 27 | 0.521 |
28 | 28 | 0.233 |
29 | 29 | 0.969 |
3 | 3 | 0.514 |
30 | 30 | 0.528 |
31 | 31 | 0.632 |
32 | 32 | 3.11035e-14 |
33 | 33 | 0.967 |
34 | 34 | 0.778 |
35 | 35 | 0.771 |
36 | 36 | 0.0477 |
37 | 37 | 0.111 |
38 | 38 | 0.474 |
39 | 39 | 0.161 |
4 | 4 | 0.874 |
40 | 40 | 0.278 |
41 | 41 | 0.78 |
42 | 42 | 0.629 |
43 | 43 | 0.202 |
44 | 44 | 0.818 |
45 | 45 | 0.774 |
46 | 46 | 0.558 |
47 | 47 | 0.921 |
48 | 48 | 0.943 |
49 | 49 | 0.68 |
5 | 5 | 0.348 |
50 | 50 | 0.905 |
51 | 51 | 0.488 |
52 | 52 | 0.576 |
53 | 53 | 0.106 |
54 | 54 | 0.763 |
55 | 55 | 0.0361 |
56 | 56 | 0.898 |
57 | 57 | 0.959 |
58 | 58 | 0.308 |
59 | 59 | 0.299 |
6 | 6 | 0.535 |
60 | 60 | 0.678 |
61 | 61 | 0.308 |
62 | 62 | 0.862 |
63 | 63 | 0.587 |
64 | 64 | 0.716 |
65 | 65 | 0.518 |
66 | 66 | 0.329 |
67 | 67 | 0.557 |
68 | 68 | 0.769 |
69 | 69 | 0.582 |
7 | 7 | 0.366 |
70 | 70 | 0.322 |
71 | 71 | 0.183 |
72 | 72 | 0.706 |
73 | 73 | 0.0125 |
74 | 74 | 0.0568 |
75 | 75 | 0.679 |
76 | 76 | 0.467 |
77 | 77 | 0.113 |
78 | 78 | 0.349 |
79 | 79 | 0.0182 |
8 | 8 | 0.459 |
80 | 80 | 0.689 |
81 | 81 | 0.322 |
82 | 82 | 0.143 |
83 | 83 | 0.936 |
84 | 84 | 0.129 |
85 | 85 | 0.0839 |
86 | 86 | 0.481 |
87 | 87 | 0.213 |
88 | 88 | 0.909 |
89 | 89 | 0.0941 |
9 | 9 | 0.596 |
90 | 90 | 0.805 |
91 | 91 | 0.814 |
92 | 92 | 0.0253 |
93 | 93 | 0.713 |
94 | 94 | 0.646 |
95 | 95 | 0.371 |
96 | 96 | 0.238 |
97 | 97 | 0.295 |
98 | 98 | 0.387 |
99 | 99 | 0.0283 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11052
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000139 human preadipocyte of the breast sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002334 (preadipocyte)
0002580 (preadipocyte of the breast)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000310 (breast)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0009569 (subdivision of trunk)
0001443 (chest)
0000915 (thoracic segment of trunk)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000137 (human preadipocyte sample)
0000139 (human preadipocyte of the breast sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)