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{{f5samples
{{f5samples
|id=FF:11390-118C4
|DRA_sample_Accession=CAGE@SAMD00004721
|name=Neutrophils, donor3
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004721
|sample_id=11390
|accession_numbers=CAGE;DRX008380;DRR009252;DRZ000677;DRZ002062;DRZ012027;DRZ013412
|rna_tube_id=118C4
|accession_numbers_RNASeq=sRNA-Seq;DRX037208;DRR041574;DRZ007216
|rna_box=118
|ancestors_in_anatomy_facet=
|rna_position=C4
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000775
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=3HBiomedical
|rna_lot_number=Neu736
|rna_catalog_number=3H100-94-25
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=29 years old adult
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=29
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=neutrophil
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.394
|sample_note=
|profile_hcage=CNhs11905,LSID834,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10013,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000081,CL:0000094,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000775,CL:0000837,CL:0000988,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000122
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.33!2138.80!PLEK;;chr11:47400078..47400106,-!p1@SPI1!3.27!1847.46!SPI1;;chr11:47400062..47400077,-!p2@SPI1!2.63!429.75!SPI1;;chr2:70142232..70142251,+!p1@MXD1!2.53!1797.32!MXD1;;chr7:28725715..28725727,+!p3@CREB5!2.43!314.13!CREB5;;chr11:47400032..47400043,-!p5@SPI1!2.26!179.86!SPI1;;chr7:28725740..28725778,+!p1@CREB5!2.22!1379.59!CREB5;;chr3:187463179..187463201,-!p2@BCL6!2.22!644.42!BCL6;;chr12:54694758..54694805,-!p1@NFE2!2.18!181.51!NFE2;;chr5:142782823..142782854,-!p3@NR3C1!2.15!196.02!NR3C1;;chr11:47399947..47399961,-!p3@SPI1!2.15!139.66!SPI1;;chr11:47399996..47400014,-!p4@SPI1!2.11!129.30!SPI1;;chr7:50344289..50344323,+!p1@IKZF1!2.06!114.79!IKZF1;;chr12:54694653..54694672,-!p2@NFE2!2.05!112.31!NFE2;;chr2:231090471..231090504,+!p2@SP140!2.05!110.65!SP140;;chr6:144385698..144385742,-!p2@PLAGL1!2.04!130.54!PLAGL1;;chr10:35484053..35484076,+!p1@CREM!2.03!255.28!CREM;;chr14:35872962..35873025,-!p3@NFKBIA!2.01!245.75!NFKBIA;;chr4:106068026..106068084,+!p1@TET2!1.97!773.71!TET2;;chr11:47400045..47400060,-!p6@SPI1!1.97!92.00!SPI1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.95!89.10!ZBED1;;chr10:51572408..51572454,+!p3@NCOA4!1.94!472.43!NCOA4;;chr7:149470641..149470694,-!p1@ZNF467!1.92!351.01!ZNF467;;chr19:45250948..45250998,+!p3@BCL3!1.91!197.26!BCL3;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.91!127.23!PCBP2;;chr19:45251395..45251432,+!p8@BCL3!1.90!78.74!BCL3;;chr3:39195075..39195088,-!p1@CSRNP1!1.88!443.84!CSRNP1;;chr19:45252008..45252024,+!p2@BCL3!1.88!238.70!BCL3;;chr19:36391434..36391450,-!p1@NFKBID!1.85!134.27!NFKBID;;chr10:31288398..31288455,-!p2@ZNF438!1.85!81.64!ZNF438;;chr2:157189180..157189290,-!p1@NR4A2!1.83!333.60!NR4A2;;chr2:70166258..70166288,+!p5@MXD1!1.83!67.14!MXD1;;chr14:35872453..35872485,-!p2@NFKBIA!1.82!154.58!NFKBIA;;chr9:88969339..88969422,-!p2@ZCCHC6!1.81!466.63!ZCCHC6;;chr3:187463220..187463232,-!p3@BCL6!1.81!184.83!BCL6;;chr3:39195037..39195069,-!p2@CSRNP1!1.80!363.86!CSRNP1;;chr2:231090433..231090469,+!p1@SP140!1.80!62.16!SP140;;chr2:70142189..70142223,+!p2@MXD1!1.79!411.93!MXD1;;chr9:102584262..102584276,+!p1@NR4A3!1.79!130.54!NR4A3;;chr12:54694807..54694832,-!p3@NFE2!1.77!58.43!NFE2;;chr8:123793988..123794016,+!p1@ZHX2!1.76!96.56!ZHX2;;chr16:31885093..31885165,+!p1@ZNF267!1.75!798.99!ZNF267;;chr3:101568349..101568365,+!p1@NFKBIZ!1.74!2608.75!NFKBIZ;;chr14:35873947..35873965,-!p1@NFKBIA!1.73!3141.68!NFKBIA;;chr2:208031943..208031978,-!p5@KLF7!1.73!69.62!KLF7;;chr7:50343634..50343717,+!p2@IKZF1!1.72!51.80!IKZF1;;chr2:231084659..231084721,-!p1@SP110!1.71!1100.27!SP110;;chr2:68592394..68592405,+!p2@PLEK!1.71!50.14!PLEK;;chr8:22550982..22550999,-!p1@EGR3!1.70!133.03!EGR3;;chr2:231084639..231084654,-!p2@SP110!1.70!79.57!SP110;;chr2:28618532..28618610,+!p4@FOSL2!1.69!81.23!FOSL2;;chr1:156470515..156470542,-!p2@MEF2D!1.67!228.76!MEF2D;;chr9:102584241..102584261,+!p4@NR4A3!1.65!65.89!NR4A3;;chr17:38497662..38497713,+!p4@RARA!1.65!50.56!RARA;;chr9:94186101..94186122,-!p1@NFIL3!1.64!563.19!NFIL3;;chr4:140098339..140098392,-!p1@ELF2!1.64!333.19!ELF2;;chr5:176735063..176735088,-!p2@MXD3!1.64!43.10!MXD3;;chr5:131826457..131826514,-!p1@IRF1!1.63!1535.00!IRF1;;chr19:45251943..45252006,+!p1@BCL3!1.63!1044.33!BCL3;;chr4:185395633..185395651,-!p2@IRF2!1.63!65.48!IRF2;;chr17:38498402..38498445,+!p3@RARA!1.62!142.56!RARA;;chr9:88969303..88969335,-!p1@ZCCHC6!1.61!354.33!ZCCHC6;;chr14:35872926..35872951,-!p4@NFKBIA!1.61!55.12!NFKBIA;;chr2:61108695..61108753,+!p1@REL!1.60!255.28!REL;;chr13:41593425..41593480,-!p1@ELF1!1.60!237.87!ELF1;;chr10:104154415..104154434,+!p5@NFKB2!1.60!38.96!NFKB2;;chr20:56195474..56195506,-!p1@ZBP1!1.59!38.13!ZBP1;;chr3:187463248..187463264,-!p1@BCL6!1.58!757.55!BCL6;;chr4:103422499..103422632,+!p1@NFKB1!1.58!727.30!NFKB1;;chr6:44355499..44355514,+!p3@CDC5L!1.58!40.61!CDC5L;;chr2:70165961..70165981,+!p8@MXD1!1.58!36.88!MXD1;;chr9:102584128..102584144,+!p3@NR4A3!1.57!67.55!NR4A3;;chr1:8484007..8484061,-!p13@RERE!1.56!44.34!RERE;;chr6:12011943..12012015,+!p2@HIVEP1!1.54!105.26!HIVEP1;;chr3:63898321..63898396,+!p3@ATXN7!1.54!74.59!ATXN7;;chr9:94186085..94186096,-!p3@NFIL3!1.53!53.05!NFIL3;;chr10:104154246..104154347,+!p3@NFKB2!1.52!186.90!NFKB2;;chr17:38498594..38498661,+!p2@RARA!1.52!104.85!RARA;;chr9:32550965..32551031,-!p4@TOPORS!1.52!48.90!TOPORS;;chr10:104155659..104155676,+!p4@NFKB2!1.51!38.96!NFKB2;;chr5:142782862..142782881,-!p11@NR3C1!1.51!31.50!NR3C1;;chr14:75745523..75745537,+!p1@FOS!1.50!3442.14!FOS;;chr6:12012170..12012245,+!p1@HIVEP1!1.50!146.70!HIVEP1;;chr13:72441315..72441454,-!p1@DACH1!1.50!60.50!DACH1;;chr10:104155480..104155534,+!p2@NFKB2!1.49!188.14!NFKB2;;chr7:64126535..64126559,+!p2@ZNF107!1.49!61.75!ZNF107;;chr2:61108808..61108821,+!p3@REL!1.49!37.71!REL;;chr10:31288370..31288393,-!p3@ZNF438!1.49!30.25!ZNF438;;chr3:128212033..128212051,-!p1@GATA2!1.49!29.84!GATA2;;chr6:44233252..44233296,-!p1@NFKBIE!1.48!276.42!NFKBIE;;chr9:117150254..117150271,-!p1@AKNA!1.48!77.08!AKNA;;chr10:51572339..51572376,+!p4@NCOA4!1.48!64.23!NCOA4;;chr4:83822246..83822277,+!p5@THAP9!1.48!29.01!THAP9;;chrX:106960180..106960197,-!p2@TSC22D3!1.47!104.85!TSC22D3;;chr20:48807171..48807234,+!p4@CEBPB!1.47!61.33!CEBPB;;chr4:185395191..185395226,-!p4@IRF2!1.47!39.78!IRF2;;chr9:94173455..94173468,-!p4@NFIL3!1.47!28.59!NFIL3;;chr19:12902289..12902307,+!p1@JUNB!1.45!5891.75!JUNB;;chr4:38665769..38665801,+!p2@KLF3!1.45!238.29!KLF3;;chr6:15249128..15249177,+!p4@JARID2!1.45!48.07!JARID2;;chr2:61108771..61108789,+!p4@REL!1.45!40.61!REL;;chr1:67395833..67395851,+!p8@MIER1!1.45!32.74!MIER1;;chr8:71316021..71316068,-!p1@NCOA2!1.44!238.70!NCOA2;;chr6:15246200..15246214,+!p2@JARID2!1.44!71.69!JARID2;;chr1:221052733..221052749,+!p2@HLX!1.44!33.98!HLX;;chr1:221052776..221052799,+!p1@HLX!1.42!44.76!HLX;;chr2:61108878..61108891,+!p5@REL!1.42!25.28!REL;;chr5:172483347..172483407,+!p1@C5orf41!1.41!177.78!CREBRF;;chr4:83822199..83822239,+!p2@THAP9!1.41!29.42!THAP9;;chr10:35484090..35484104,+!p6@CREM!1.41!24.86!CREM;;chr11:128563948..128564003,+!p1@FLI1!1.40!277.24!FLI1;;chr1:158979872..158979898,+!p3@IFI16!1.40!72.11!IFI16;;chr1:156470494..156470505,-!p3@MEF2D!1.40!34.40!MEF2D;;chr9:127533519..127533573,-!p2@NR6A1!1.40!29.01!NR6A1;;chr10:51585449..51585487,+!p6@NCOA4!1.40!24.04!NCOA4;;chr21:30671235..30671253,+!p1@BACH1!1.39!288.02!BACH1;;chr7:106809470..106809481,+!p2@HBP1!1.39!32.74!HBP1;;chr2:174828545..174828644,-!p1@SP3!1.38!339.41!SP3;;chr2:97202480..97202499,+!p1@ARID5A!1.38!227.10!ARID5A;;chr10:3827371..3827386,-!p2@KLF6!1.38!187.32!KLF6;;chr17:38487239..38487261,+!p12@RARA!1.38!23.21!RARA;;chr3:39195139..39195150,-!p3@CSRNP1!1.37!28.59!CSRNP1;;chr19:45504688..45504782,+!p1@RELB!1.36!127.64!RELB;;chr1:247095162..247095173,-!p3@AHCTF1!1.36!33.57!AHCTF1;;chr7:149470540..149470596,-!p2@ZNF467!1.36!28.59!ZNF467;;chr2:70166156..70166179,+!p4@MXD1!1.36!21.96!MXD1;;chr12:8205566..8205581,+!p8@FOXJ2!1.36!21.96!FOXJ2;;chr19:45257891..45257908,+!p17@BCL3!1.36!21.96!BCL3;;chr9:117160738..117160782,-!p2@AKNA!1.35!86.20!AKNA;;chr21:30671189..30671207,+!p4@BACH1!1.35!73.35!BACH1;;chr16:3313791..3313834,+!p2@ZNF263!1.35!47.24!ZNF263;;chr19:47616992..47617011,-!p4@ZC3H4!1.35!44.76!ZC3H4;;chr1:67395855..67395872,+!p5@MIER1!1.35!32.32!MIER1;;chr4:103422811..103422822,+!p11@NFKB1!1.35!21.55!NFKB1;;chr20:48807351..48807384,+!p1@CEBPB!1.34!2046.38!CEBPB;;chr19:21688458..21688467,+!p3@ZNF429!1.34!20.72!ZNF429;;chr19:36389839..36389857,-!p4@NFKBID!1.34!20.72!NFKBID;;chr5:172483414..172483425,+!p3@C5orf41!1.33!20.31!CREBRF;;chr1:235491462..235491510,-!p1@ARID4B!1.32!345.62!ARID4B;;chr17:40428359..40428462,-!p1@STAT5B!1.32!248.65!STAT5B;;chr21:36421535..36421610,-!p2@RUNX1!1.32!68.79!RUNX1;;chr21:30671690..30671762,+!p2@BACH1!1.32!66.31!BACH1;;chr4:81104895..81104920,+!p2@PRDM8!1.32!29.42!PRDM8;;chrX:129244454..129244488,-!p1@ELF4!1.31!135.93!ELF4;;chr6:108882109..108882173,+!p2@FOXO3!1.31!102.78!FOXO3;;chr21:30671211..30671234,+!p3@BACH1!1.31!91.17!BACH1;;chr6:15245677..15245723,+!p6@JARID2!1.31!28.59!JARID2;;chr2:231077626..231077651,-!p6@SP110!1.31!24.86!SP110;;chrX:129244430..129244442,-!p5@ELF4!1.31!19.48!ELF4;;chr19:16435625..16435682,+!p1@KLF2!1.30!589.30!KLF2;;chr10:51565239..51565263,+!p2@NCOA4!1.30!433.48!NCOA4;;chr2:145277640..145277771,-!p1@ZEB2!1.30!246.16!ZEB2;;chr2:208031542..208031595,-!p2@KLF7!1.30!130.96!KLF7;;chr3:113415441..113415500,-!p1@KIAA2018!1.30!101.95!KIAA2018;;chr14:58765305..58765324,+!p4@ARID4A!1.30!23.62!ARID4A;;chr12:54694738..54694749,-!p5@NFE2!1.30!19.06!NFE2;;chr10:114709999..114710031,+!p1@TCF7L2!1.29!425.60!TCF7L2;;chr4:87928413..87928433,+!p3@AFF1!1.29!112.31!AFF1;;chr1:38325227..38325246,-!p2@MTF1!1.29!25.28!MTF1;;chr11:13299319..13299424,+!p1@ARNTL!1.28!179.03!ARNTL;;chr4:185395590..185395627,-!p3@IRF2!1.28!22.38!IRF2;;chr1:151030536..151030549,+!p8@MLLT11!1.28!18.23!MLLT11;;chr12:48298785..48298828,-!p1@VDR!1.27!90.76!VDR;;chr12:11802753..11802834,+!p2@ETV6!1.27!84.96!ETV6;;chr6:45390343..45390388,+!p10@RUNX2!1.27!24.04!RUNX2;;chr6:15246261..15246312,+!p1@JARID2!1.26!401.98!JARID2;;chr14:58765217..58765301,+!p1@ARID4A!1.26!152.92!ARID4A;;chr5:142784003..142784065,-!p2@NR3C1!1.26!139.24!NR3C1;;chr9:137217986..137218049,+!p3@RXRA!1.26!48.49!RXRA;;chr6:106534230..106534254,+!p2@PRDM1!1.26!43.10!PRDM1;;chr1:154975110..154975149,+!p2@ZBTB7B!1.26!36.05!ZBTB7B;;chr1:25256756..25256774,-!p1@RUNX3!1.26!32.32!RUNX3;;chr10:31288329..31288353,-!p7@ZNF438!1.26!17.41!ZNF438;;chr13:72440901..72440968,-!p4@DACH1!1.26!16.99!DACH1;;chr21:40177892..40177903,+!p2@ETS2!1.25!65.89!ETS2;;chr4:81118647..81118666,+!p1@PRDM8!1.25!21.96!PRDM8;;chr19:12405606..12405629,-!p2@ZNF44!1.24!31.91!ZNF44;;chr7:104654718..104654741,+!p3@MLL5!1.24!24.04!MLL5;;chr7:28725585..28725608,+!p11@CREB5!1.24!16.58!CREB5;;chr9:117138946..117138968,-!p4@AKNA!1.24!16.58!AKNA;;chr1:247095194..247095235,-!p1@AHCTF1!1.23!164.52!AHCTF1;;chr3:129158715..129158766,-!p2@MBD4!1.23!152.09!MBD4;;chr2:238600933..238600985,+!p3@LRRFIP1!1.23!84.54!LRRFIP1;;chr19:19496577..194966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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000094;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000775;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|ffid_belonging_in_development=CL:0000049,CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 43:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|rna_box=118
|rna_catalog_number=3H100-94-25
|rna_concentration=0.394
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=Neu736
|rna_od260/230=
|rna_od260/280=
|rna_position=C4
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=118C4
|rna_weight_ug=10
|rnaseq_library_id=SRhi10013.CAGATC
|sample_age=29
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=neutrophil
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=3HBiomedical
|sample_description=
|sample_dev_stage=29 years old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.74784295666309e-292!GO:0043227;membrane-bound organelle;1.39150287022836e-108!GO:0043231;intracellular membrane-bound organelle;2.21716573796632e-108!GO:0043226;organelle;1.19442053985327e-98!GO:0043229;intracellular organelle;4.26845197551783e-98!GO:0005737;cytoplasm;9.95170323330757e-95!GO:0005515;protein binding;1.94292464963247e-62!GO:0043170;macromolecule metabolic process;8.74699820298053e-61!GO:0044238;primary metabolic process;3.55180346091201e-59!GO:0044237;cellular metabolic process;9.11570767338206e-59!GO:0044422;organelle part;2.30330286993916e-57!GO:0044446;intracellular organelle part;4.43347682567024e-56!GO:0005634;nucleus;4.29162175382078e-55!GO:0044444;cytoplasmic part;6.59898804893407e-53!GO:0043283;biopolymer metabolic process;7.11490261993857e-45!GO:0044428;nuclear part;2.74733001195124e-42!GO:0033036;macromolecule localization;6.91837346044417e-42!GO:0015031;protein transport;4.9260470055464e-41!GO:0045184;establishment of protein localization;8.51109007827726e-41!GO:0008104;protein localization;6.01760701405504e-39!GO:0019538;protein metabolic process;9.99667624892659e-39!GO:0032991;macromolecular complex;2.08446981746944e-38!GO:0044260;cellular macromolecule metabolic process;5.21713126542816e-36!GO:0044267;cellular protein metabolic process;1.02554513937449e-35!GO:0003723;RNA binding;1.51307010879273e-34!GO:0043233;organelle lumen;4.47746704146464e-29!GO:0031974;membrane-enclosed lumen;4.47746704146464e-29!GO:0031981;nuclear lumen;2.79130834074379e-28!GO:0016071;mRNA metabolic process;3.1793602052293e-28!GO:0012501;programmed cell death;6.11583180486872e-28!GO:0006915;apoptosis;6.4554883779244e-28!GO:0031090;organelle membrane;7.68023113304674e-27!GO:0046907;intracellular transport;1.11092753796455e-26!GO:0008219;cell death;2.06653645592046e-26!GO:0016265;death;2.06653645592046e-26!GO:0043412;biopolymer modification;3.32833035060875e-26!GO:0016043;cellular component organization and biogenesis;9.52308297864262e-26!GO:0010467;gene expression;2.61257015098932e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.39646029516005e-25!GO:0006464;protein modification process;4.55616750870822e-25!GO:0006886;intracellular protein transport;6.87717008476496e-25!GO:0043687;post-translational protein modification;1.73282800045207e-24!GO:0043234;protein complex;2.36959182152308e-24!GO:0006397;mRNA processing;9.12058425953762e-24!GO:0005654;nucleoplasm;1.45540802716245e-23!GO:0006512;ubiquitin cycle;2.78212192292028e-23!GO:0008380;RNA splicing;5.88293295935595e-23!GO:0006396;RNA processing;4.20648093312727e-22!GO:0051649;establishment of cellular localization;1.52604225407682e-21!GO:0051641;cellular localization;1.8879349813805e-21!GO:0005829;cytosol;2.88738097371175e-20!GO:0044451;nucleoplasm part;9.99732442578617e-20!GO:0000166;nucleotide binding;1.06636956507365e-19!GO:0007242;intracellular signaling cascade;4.86867840841125e-19!GO:0030529;ribonucleoprotein complex;5.66785980844109e-19!GO:0008134;transcription factor binding;6.32713009706188e-19!GO:0007243;protein kinase cascade;3.54843968670391e-18!GO:0042981;regulation of apoptosis;3.93900706306971e-18!GO:0043067;regulation of programmed cell death;6.77417559598141e-18!GO:0065003;macromolecular complex assembly;1.26728131033017e-17!GO:0050794;regulation of cellular process;2.76318581194349e-17!GO:0016192;vesicle-mediated transport;5.01215454154622e-17!GO:0016070;RNA metabolic process;7.18691705633528e-17!GO:0005794;Golgi apparatus;1.66634505390327e-16!GO:0006793;phosphorus metabolic process;2.17608552527194e-16!GO:0006796;phosphate metabolic process;2.17608552527194e-16!GO:0044265;cellular macromolecule catabolic process;4.76102340706373e-16!GO:0005681;spliceosome;2.46748822898266e-15!GO:0032553;ribonucleotide binding;2.68516143973039e-15!GO:0032555;purine ribonucleotide binding;2.68516143973039e-15!GO:0022607;cellular component assembly;6.39246098172027e-15!GO:0016604;nuclear body;1.49462557126064e-14!GO:0006996;organelle organization and biogenesis;2.60051194306104e-14!GO:0016310;phosphorylation;2.86695743240007e-14!GO:0017076;purine nucleotide binding;2.95061315234235e-14!GO:0003676;nucleic acid binding;5.39640679336467e-14!GO:0012505;endomembrane system;6.44455494988496e-14!GO:0050789;regulation of biological process;8.31871912469126e-14!GO:0031967;organelle envelope;1.30883129281016e-13!GO:0006259;DNA metabolic process;1.31855611310719e-13!GO:0031975;envelope;1.94291074283761e-13!GO:0006412;translation;2.92466023855235e-13!GO:0016462;pyrophosphatase activity;3.05163533674701e-13!GO:0016607;nuclear speck;3.12663683237877e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.21310922178022e-13!GO:0019941;modification-dependent protein catabolic process;3.23617299671555e-13!GO:0043632;modification-dependent macromolecule catabolic process;3.23617299671555e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.60457264500133e-13!GO:0017111;nucleoside-triphosphatase activity;3.70088182731407e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;3.9497946151112e-13!GO:0005524;ATP binding;4.5520992844502e-13!GO:0006511;ubiquitin-dependent protein catabolic process;5.04016396737221e-13!GO:0044257;cellular protein catabolic process;6.23061493226307e-13!GO:0016874;ligase activity;9.02944494167395e-13!GO:0006913;nucleocytoplasmic transport;1.25868859647161e-12!GO:0065007;biological regulation;1.4836638948095e-12!GO:0032559;adenyl ribonucleotide binding;1.7496656642192e-12!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.93590529056139e-12!GO:0048523;negative regulation of cellular process;2.44608959837999e-12!GO:0051169;nuclear transport;2.83840935460642e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.19882806372869e-12!GO:0006605;protein targeting;5.19882806372869e-12!GO:0006366;transcription from RNA polymerase II promoter;5.19882806372869e-12!GO:0065009;regulation of a molecular function;7.18977813283629e-12!GO:0043285;biopolymer catabolic process;1.0091036771743e-11!GO:0003712;transcription cofactor activity;1.06588902537299e-11!GO:0019222;regulation of metabolic process;1.23936504622992e-11!GO:0030554;adenyl nucleotide binding;2.31184092483894e-11!GO:0005768;endosome;2.77146189772297e-11!GO:0009057;macromolecule catabolic process;2.94963555422552e-11!GO:0008639;small protein conjugating enzyme activity;3.3444096821848e-11!GO:0019787;small conjugating protein ligase activity;4.61277525938239e-11!GO:0009059;macromolecule biosynthetic process;5.69491329793709e-11!GO:0004842;ubiquitin-protein ligase activity;6.53315316697071e-11!GO:0006950;response to stress;7.65483862233662e-11!GO:0009058;biosynthetic process;7.65483862233662e-11!GO:0002376;immune system process;7.69008655098082e-11!GO:0048519;negative regulation of biological process;7.87051275849508e-11!GO:0005739;mitochondrion;1.4209733524002e-10!GO:0043066;negative regulation of apoptosis;1.51652870552151e-10!GO:0044248;cellular catabolic process;1.7544995724735e-10!GO:0043069;negative regulation of programmed cell death;1.83847184288319e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.91554085285953e-10!GO:0048193;Golgi vesicle transport;6.76652674956501e-10!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.54433190816897e-09!GO:0051246;regulation of protein metabolic process;1.81722234270326e-09!GO:0004674;protein serine/threonine kinase activity;1.93826662136957e-09!GO:0005773;vacuole;2.01025541472002e-09!GO:0016568;chromatin modification;2.12630224360548e-09!GO:0030163;protein catabolic process;2.18070753207816e-09!GO:0044249;cellular biosynthetic process;2.29669383568487e-09!GO:0006916;anti-apoptosis;3.84325217191925e-09!GO:0031323;regulation of cellular metabolic process;6.87711630740709e-09!GO:0050790;regulation of catalytic activity;7.32101431168704e-09!GO:0003713;transcription coactivator activity;7.37174698542922e-09!GO:0022618;protein-RNA complex assembly;8.60636679916483e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.08458848827467e-08!GO:0016881;acid-amino acid ligase activity;1.12845579561877e-08!GO:0005635;nuclear envelope;1.49736759454967e-08!GO:0007049;cell cycle;1.59654237029509e-08!GO:0006119;oxidative phosphorylation;1.74977174340126e-08!GO:0007264;small GTPase mediated signal transduction;2.42255408581768e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.53195766322987e-08!GO:0043065;positive regulation of apoptosis;3.21293562370823e-08!GO:0006955;immune response;3.21293562370823e-08!GO:0009615;response to virus;3.47427476298633e-08!GO:0043068;positive regulation of programmed cell death;3.77703358039498e-08!GO:0006323;DNA packaging;4.10653608207146e-08!GO:0048522;positive regulation of cellular process;4.60966181537326e-08!GO:0048770;pigment granule;5.12679789649158e-08!GO:0042470;melanosome;5.12679789649158e-08!GO:0019899;enzyme binding;5.14159120942718e-08!GO:0006457;protein folding;5.56987648515453e-08!GO:0016887;ATPase activity;9.41097112105062e-08!GO:0044429;mitochondrial part;9.89547025749288e-08!GO:0051170;nuclear import;1.25845049233974e-07!GO:0044431;Golgi apparatus part;1.28142165557382e-07!GO:0016773;phosphotransferase activity, alcohol group as acceptor;1.34066317041843e-07!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.34677626765367e-07!GO:0031965;nuclear membrane;1.43585538579114e-07!GO:0000323;lytic vacuole;1.46028379760102e-07!GO:0005764;lysosome;1.46028379760102e-07!GO:0005770;late endosome;1.53796667862911e-07!GO:0006606;protein import into nucleus;1.71776472221264e-07!GO:0017038;protein import;2.08914983317324e-07!GO:0044453;nuclear membrane part;2.32410083682688e-07!GO:0016301;kinase activity;2.56135757758666e-07!GO:0044440;endosomal part;2.65372869470106e-07!GO:0010008;endosome membrane;2.65372869470106e-07!GO:0048518;positive regulation of biological process;2.65955361461525e-07!GO:0019829;cation-transporting ATPase activity;2.81004192044823e-07!GO:0016563;transcription activator activity;2.81004192044823e-07!GO:0008047;enzyme activator activity;3.08920219714453e-07!GO:0042623;ATPase activity, coupled;3.47154560386743e-07!GO:0010468;regulation of gene expression;3.77388165236802e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;3.77823828475396e-07!GO:0000375;RNA splicing, via transesterification reactions;3.77823828475396e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.77823828475396e-07!GO:0016787;hydrolase activity;3.8264637425358e-07!GO:0051276;chromosome organization and biogenesis;4.03894326037111e-07!GO:0016740;transferase activity;4.28807685614745e-07!GO:0031324;negative regulation of cellular metabolic process;4.51173895765459e-07!GO:0044445;cytosolic part;6.24883460082233e-07!GO:0000502;proteasome complex (sensu Eukaryota);6.52120913640326e-07!GO:0008135;translation factor activity, nucleic acid binding;6.88415231086277e-07!GO:0051726;regulation of cell cycle;7.51213899364289e-07!GO:0006974;response to DNA damage stimulus;7.62304061114228e-07!GO:0008565;protein transporter activity;7.70086209860862e-07!GO:0006917;induction of apoptosis;7.82353430211553e-07!GO:0048475;coated membrane;7.92551358864808e-07!GO:0030117;membrane coat;7.92551358864808e-07!GO:0060090;molecular adaptor activity;8.9001613545519e-07!GO:0009967;positive regulation of signal transduction;9.19636986809027e-07!GO:0005774;vacuolar membrane;9.30453314157694e-07!GO:0000074;regulation of progression through cell cycle;1.08191245447631e-06!GO:0005740;mitochondrial envelope;1.19702109585067e-06!GO:0006468;protein amino acid phosphorylation;1.20843228065869e-06!GO:0012502;induction of programmed cell death;1.21741157292093e-06!GO:0050657;nucleic acid transport;1.30677832555223e-06!GO:0051236;establishment of RNA localization;1.30677832555223e-06!GO:0050658;RNA transport;1.30677832555223e-06!GO:0005783;endoplasmic reticulum;1.41209973507862e-06!GO:0006446;regulation of translational initiation;1.57121658166152e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.6073215855317e-06!GO:0006403;RNA localization;1.61251378566301e-06!GO:0032446;protein modification by small protein conjugation;1.71845491448217e-06!GO:0009966;regulation of signal transduction;2.55574126962358e-06!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.78308588448024e-06!GO:0045786;negative regulation of progression through cell cycle;2.80548445193875e-06!GO:0031966;mitochondrial membrane;3.26156270668989e-06!GO:0009892;negative regulation of metabolic process;3.28732082936068e-06!GO:0006350;transcription;3.38290184684662e-06!GO:0003743;translation initiation factor activity;3.39896748924041e-06!GO:0044437;vacuolar part;3.48999324506738e-06!GO:0016564;transcription repressor activity;3.61694750508438e-06!GO:0016197;endosome transport;4.35376991001706e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.9076374031179e-06!GO:0006413;translational initiation;5.20299352560374e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;5.59358702268003e-06!GO:0019866;organelle inner membrane;5.75450485736071e-06!GO:0030695;GTPase regulator activity;5.7578803448888e-06!GO:0009056;catabolic process;5.77443560298943e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.82654401092528e-06!GO:0016567;protein ubiquitination;6.3053260197543e-06!GO:0006461;protein complex assembly;6.3199524146517e-06!GO:0051186;cofactor metabolic process;6.41979942253086e-06!GO:0006417;regulation of translation;7.42404244301447e-06!GO:0005765;lysosomal membrane;8.63659684827135e-06!GO:0000139;Golgi membrane;9.84115075041879e-06!GO:0009607;response to biotic stimulus;1.06566771674165e-05!GO:0030120;vesicle coat;1.06566771674165e-05!GO:0030662;coated vesicle membrane;1.06566771674165e-05!GO:0008270;zinc ion binding;1.16128679354392e-05!GO:0051028;mRNA transport;1.1683777778385e-05!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.17142657174149e-05!GO:0000151;ubiquitin ligase complex;1.17994569912516e-05!GO:0015986;ATP synthesis coupled proton transport;1.18015668495664e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.18015668495664e-05!GO:0016481;negative regulation of transcription;1.19085686854604e-05!GO:0003924;GTPase activity;1.30578741605198e-05!GO:0051082;unfolded protein binding;1.37202030554753e-05!GO:0048468;cell development;1.70721748602906e-05!GO:0005643;nuclear pore;1.83651327644898e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.86494327366288e-05!GO:0004386;helicase activity;2.05216113676559e-05!GO:0009889;regulation of biosynthetic process;2.42118355057762e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.69367550607185e-05!GO:0015078;hydrogen ion transmembrane transporter activity;2.78038982306701e-05!GO:0051336;regulation of hydrolase activity;2.87334053235375e-05!GO:0005769;early endosome;2.89009410558079e-05!GO:0005096;GTPase activator activity;2.89356612090066e-05!GO:0046914;transition metal ion binding;3.13955024576841e-05!GO:0031326;regulation of cellular biosynthetic process;3.23415482310035e-05!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.63583807910678e-05!GO:0007265;Ras protein signal transduction;4.20468883526582e-05!GO:0006754;ATP biosynthetic process;4.48534728928945e-05!GO:0006753;nucleoside phosphate metabolic process;4.48534728928945e-05!GO:0005057;receptor signaling protein activity;4.54317387844722e-05!GO:0006281;DNA repair;4.70945310035743e-05!GO:0044432;endoplasmic reticulum part;4.72496624888812e-05!GO:0005525;GTP binding;4.72496624888812e-05!GO:0032940;secretion by cell;4.72803344971801e-05!GO:0008026;ATP-dependent helicase activity;5.49228421543727e-05!GO:0006732;coenzyme metabolic process;5.52561188336975e-05!GO:0005070;SH3/SH2 adaptor activity;5.69574686994452e-05!GO:0022402;cell cycle process;5.75266583383813e-05!GO:0006401;RNA catabolic process;5.78459632997178e-05!GO:0051168;nuclear export;6.03418923506657e-05!GO:0031902;late endosome membrane;6.31912724681587e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.37338484565381e-05!GO:0033279;ribosomal subunit;6.37553248810784e-05!GO:0045449;regulation of transcription;6.42153028634942e-05!GO:0005789;endoplasmic reticulum membrane;6.44141917999296e-05!GO:0006351;transcription, DNA-dependent;6.75297645791839e-05!GO:0031982;vesicle;6.80434621691312e-05!GO:0005840;ribosome;7.18354490269793e-05!GO:0032774;RNA biosynthetic process;7.73667994517759e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.76019571166659e-05!GO:0043228;non-membrane-bound organelle;7.8970330685503e-05!GO:0043232;intracellular non-membrane-bound organelle;7.8970330685503e-05!GO:0043566;structure-specific DNA binding;7.99087967301812e-05!GO:0006402;mRNA catabolic process;8.7577562600234e-05!GO:0005798;Golgi-associated vesicle;8.9183082758447e-05!GO:0008632;apoptotic program;9.55916258205063e-05!GO:0005083;small GTPase regulator activity;0.000103593771861656!GO:0005793;ER-Golgi intermediate compartment;0.000108123385364677!GO:0046034;ATP metabolic process;0.000117994283423405!GO:0065004;protein-DNA complex assembly;0.000123888785061093!GO:0046930;pore complex;0.000156867928302607!GO:0051338;regulation of transferase activity;0.000160117231746729!GO:0004672;protein kinase activity;0.00016973869860756!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000171209972689941!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000171209972689941!GO:0009150;purine ribonucleotide metabolic process;0.000179562063060549!GO:0009152;purine ribonucleotide biosynthetic process;0.000186991788363117!GO:0009259;ribonucleotide metabolic process;0.000190006120220361!GO:0043549;regulation of kinase activity;0.000211366771624692!GO:0005743;mitochondrial inner membrane;0.000220154041018578!GO:0045859;regulation of protein kinase activity;0.000232989306833155!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00024017576178033!GO:0009142;nucleoside triphosphate biosynthetic process;0.000243684062972118!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000243684062972118!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000247230996112327!GO:0005885;Arp2/3 protein complex;0.000257591180578075!GO:0031410;cytoplasmic vesicle;0.000274159584001436!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000274159584001436!GO:0009144;purine nucleoside triphosphate metabolic process;0.000274159584001436!GO:0002757;immune response-activating signal transduction;0.000277428920750273!GO:0003714;transcription corepressor activity;0.0002825222248483!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000296215417908654!GO:0006352;transcription initiation;0.000300948770408415!GO:0005813;centrosome;0.000309647404310196!GO:0044455;mitochondrial membrane part;0.000320276321053872!GO:0016044;membrane organization and biogenesis;0.000327430538809968!GO:0007050;cell cycle arrest;0.000341604006592971!GO:0005730;nucleolus;0.000342401557247732!GO:0006355;regulation of transcription, DNA-dependent;0.000350561246353473!GO:0032561;guanyl ribonucleotide binding;0.000355910725279581!GO:0019001;guanyl nucleotide binding;0.000355910725279581!GO:0009199;ribonucleoside triphosphate metabolic process;0.000365526473901211!GO:0003735;structural constituent of ribosome;0.000375543318257345!GO:0016363;nuclear matrix;0.000411831554623658!GO:0031988;membrane-bound vesicle;0.000436811790258981!GO:0006163;purine nucleotide metabolic process;0.000439656370790518!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000446791495065922!GO:0015399;primary active transmembrane transporter activity;0.000446791495065922!GO:0009719;response to endogenous stimulus;0.00046233742782743!GO:0030036;actin cytoskeleton organization and biogenesis;0.000490564877052741!GO:0006613;cotranslational protein targeting to membrane;0.000503135378182363!GO:0006164;purine nucleotide biosynthetic process;0.000503135378182363!GO:0005815;microtubule organizing center;0.000510369926062091!GO:0043087;regulation of GTPase activity;0.00051591434946969!GO:0009260;ribonucleotide biosynthetic process;0.000515975920871043!GO:0043492;ATPase activity, coupled to movement of substances;0.000560078380907645!GO:0015630;microtubule cytoskeleton;0.000577653815532676!GO:0002764;immune response-regulating signal transduction;0.000625006035705636!GO:0005694;chromosome;0.000637539564299778!GO:0051188;cofactor biosynthetic process;0.000673341691220362!GO:0009141;nucleoside triphosphate metabolic process;0.000682086176790463!GO:0006752;group transfer coenzyme metabolic process;0.000700447847904021!GO:0004722;protein serine/threonine phosphatase activity;0.000723237693262714!GO:0043085;positive regulation of catalytic activity;0.000724894269194995!GO:0003697;single-stranded DNA binding;0.000727118336619519!GO:0030658;transport vesicle membrane;0.000736083626323878!GO:0005637;nuclear inner membrane;0.00073814566720746!GO:0045045;secretory pathway;0.000766953165068886!GO:0051707;response to other organism;0.000766953165068886!GO:0005746;mitochondrial respiratory chain;0.000768843923749024!GO:0031901;early endosome membrane;0.000771893724373046!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.000810009983381266!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000858611967215764!GO:0044262;cellular carbohydrate metabolic process;0.000974778472704843!GO:0009108;coenzyme biosynthetic process;0.00100380059287023!GO:0016023;cytoplasmic membrane-bound vesicle;0.00103758404306694!GO:0046822;regulation of nucleocytoplasmic transport;0.00104991692679073!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00113805010275484!GO:0065002;intracellular protein transport across a membrane;0.00113996779470823!GO:0009893;positive regulation of metabolic process;0.00114068977778189!GO:0006333;chromatin assembly or disassembly;0.00114470185498346!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00114470185498346!GO:0006612;protein targeting to membrane;0.00117515851426392!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0012330921584668!GO:0006818;hydrogen transport;0.00128290268420767!GO:0045893;positive regulation of transcription, DNA-dependent;0.00134230229005764!GO:0006643;membrane lipid metabolic process;0.00137862443767703!GO:0005099;Ras GTPase activator activity;0.00138461449173293!GO:0005839;proteasome core complex (sensu Eukaryota);0.0014816064023299!GO:0008654;phospholipid biosynthetic process;0.0014899993761544!GO:0016791;phosphoric monoester hydrolase activity;0.00152843074627421!GO:0003724;RNA helicase activity;0.0015572725118016!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00157666576204331!GO:0005667;transcription factor complex;0.0016042738093703!GO:0030133;transport vesicle;0.00161206018640442!GO:0051223;regulation of protein transport;0.00166577813109414!GO:0031252;leading edge;0.00168601736025763!GO:0016251;general RNA polymerase II transcription factor activity;0.00170246197717697!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00178710844853129!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);0.00183934730158426!GO:0015992;proton transport;0.00187988525979058!GO:0030660;Golgi-associated vesicle membrane;0.00204093549335562!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00211316754274216!GO:0008286;insulin receptor signaling pathway;0.00212449288611476!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00213357400794263!GO:0030258;lipid modification;0.00216126909697846!GO:0045892;negative regulation of transcription, DNA-dependent;0.00223258651016795!GO:0007034;vacuolar transport;0.00230114113224364!GO:0030384;phosphoinositide metabolic process;0.00231226803567081!GO:0008234;cysteine-type peptidase activity;0.00236578094973295!GO:0030118;clathrin coat;0.00238922107806965!GO:0000287;magnesium ion binding;0.00249468206558937!GO:0006260;DNA replication;0.00255363910479703!GO:0022890;inorganic cation transmembrane transporter activity;0.00257614460293765!GO:0006650;glycerophospholipid metabolic process;0.00289426016933608!GO:0051427;hormone receptor binding;0.00295698276265322!GO:0051789;response to protein stimulus;0.0031732416403749!GO:0006986;response to unfolded protein;0.0031732416403749!GO:0050136;NADH dehydrogenase (quinone) activity;0.00324793717164399!GO:0003954;NADH dehydrogenase activity;0.00324793717164399!GO:0008137;NADH dehydrogenase (ubiquinone) activity;0.00324793717164399!GO:0031625;ubiquitin protein ligase binding;0.00331989562012515!GO:0006919;caspase activation;0.00334291108629689!GO:0044427;chromosomal part;0.00335629357458112!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00338040314303712!GO:0035257;nuclear hormone receptor binding;0.00343272941310989!GO:0006897;endocytosis;0.00343272941310989!GO:0010324;membrane invagination;0.00343272941310989!GO:0030521;androgen receptor signaling pathway;0.00347972432322942!GO:0004298;threonine endopeptidase activity;0.00359280219113894!GO:0006954;inflammatory response;0.00359316049251075!GO:0015935;small ribosomal subunit;0.00359316049251075!GO:0006952;defense response;0.00361440665482081!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;0.00370270950170103!GO:0032318;regulation of Ras GTPase activity;0.00379252240234708!GO:0030099;myeloid cell differentiation;0.00380015572443395!GO:0045941;positive regulation of transcription;0.00380015572443395!GO:0003729;mRNA binding;0.00401531703747712!GO:0042775;organelle ATP synthesis coupled electron transport;0.00405920872568853!GO:0042773;ATP synthesis coupled electron transport;0.00405920872568853!GO:0043280;positive regulation of caspase activity;0.00442413934265098!GO:0008287;protein serine/threonine phosphatase complex;0.00448909696670547!GO:0030518;steroid hormone receptor signaling pathway;0.00465157804874923!GO:0000245;spliceosome assembly;0.00467058802088066!GO:0043281;regulation of caspase activity;0.0052016227444247!GO:0015631;tubulin binding;0.00529356800134345!GO:0006914;autophagy;0.00529759537302356!GO:0030127;COPII vesicle coat;0.00540406625580967!GO:0012507;ER to Golgi transport vesicle membrane;0.00540406625580967!GO:0033157;regulation of intracellular protein transport;0.00540406625580967!GO:0042306;regulation of protein import into nucleus;0.00540406625580967!GO:0033367;protein localization in mast cell secretory granule;0.00540406625580967!GO:0033365;protein localization in organelle;0.00540406625580967!GO:0033371;T cell secretory granule organization and biogenesis;0.00540406625580967!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00540406625580967!GO:0033375;protease localization in T cell secretory granule;0.00540406625580967!GO:0042629;mast cell granule;0.00540406625580967!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00540406625580967!GO:0033364;mast cell secretory granule organization and biogenesis;0.00540406625580967!GO:0033380;granzyme B localization in T cell secretory granule;0.00540406625580967!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00540406625580967!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00540406625580967!GO:0033368;protease localization in mast cell secretory granule;0.00540406625580967!GO:0033366;protein localization in secretory granule;0.00540406625580967!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00540406625580967!GO:0033374;protein localization in T cell secretory granule;0.00540406625580967!GO:0006611;protein export from nucleus;0.0055412347872053!GO:0030029;actin filament-based process;0.00564841289187755!GO:0001816;cytokine production;0.00567951067127523!GO:0030041;actin filament polymerization;0.00574352091770846!GO:0050851;antigen receptor-mediated signaling pathway;0.00580577413644236!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;0.00601938255271715!GO:0042802;identical protein binding;0.00603241666424967!GO:0008186;RNA-dependent ATPase activity;0.00611221615772011!GO:0006672;ceramide metabolic process;0.00614547960561346!GO:0030964;NADH dehydrogenase complex (quinone);0.00625870729229097!GO:0045271;respiratory chain complex I;0.00625870729229097!GO:0005747;mitochondrial respiratory chain complex I;0.00625870729229097!GO:0030218;erythrocyte differentiation;0.00625870729229097!GO:0033673;negative regulation of kinase activity;0.00631754813658037!GO:0006469;negative regulation of protein kinase activity;0.00631754813658037!GO:0051090;regulation of transcription factor activity;0.00641637319857923!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00658902565658411!GO:0046519;sphingoid metabolic process;0.00680842021372806!GO:0031325;positive regulation of cellular metabolic process;0.0070064369043006!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;0.007235163034433!GO:0046983;protein dimerization activity;0.00741581012242466!GO:0000165;MAPKKK cascade;0.00778227510150297!GO:0000785;chromatin;0.00825486554673911!GO:0001819;positive regulation of cytokine production;0.0082900959572008!GO:0018193;peptidyl-amino acid modification;0.00831551348190168!GO:0045637;regulation of myeloid cell differentiation;0.00840521067891116!GO:0003690;double-stranded DNA binding;0.00850876172197289!GO:0046966;thyroid hormone receptor binding;0.00856213675519069!GO:0030134;ER to Golgi transport vesicle;0.00887251992623316!GO:0007041;lysosomal transport;0.00897510663193866!GO:0006891;intra-Golgi vesicle-mediated transport;0.00900264024230427!GO:0008017;microtubule binding;0.00952868769789253!GO:0022415;viral reproductive process;0.00966974345956886!GO:0002467;germinal center formation;0.0098729667435659!GO:0051345;positive regulation of hydrolase activity;0.0098887319634343!GO:0008383;manganese superoxide dismutase activity;0.00989169597294906!GO:0001315;age-dependent response to reactive oxygen species;0.00989169597294906!GO:0043506;regulation of JNK activity;0.0100460346805073!GO:0003702;RNA polymerase II transcription factor activity;0.0102565988625283!GO:0006607;NLS-bearing substrate import into nucleus;0.0104927930333855!GO:0019318;hexose metabolic process;0.010994877531154!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0110461262071016!GO:0030176;integral to endoplasmic reticulum membrane;0.0110465354737985!GO:0003725;double-stranded RNA binding;0.0110677158465665!GO:0007040;lysosome organization and biogenesis;0.0110777923764766!GO:0016311;dephosphorylation;0.0111473857438105!GO:0000119;mediator complex;0.0119028956521884!GO:0046854;phosphoinositide phosphorylation;0.0120124663757887!GO:0008637;apoptotic mitochondrial changes;0.0120317576596599!GO:0030119;AP-type membrane coat adaptor complex;0.0120805662792089!GO:0002274;myeloid leukocyte activation;0.0121853715250476!GO:0006644;phospholipid metabolic process;0.0121853715250476!GO:0051348;negative regulation of transferase activity;0.0121853715250476!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0121853715250476!GO:0046578;regulation of Ras protein signal transduction;0.012253271758502!GO:0008656;caspase activator activity;0.0124217675525226!GO:0006984;ER-nuclear signaling pathway;0.0124641589261587!GO:0032640;tumor necrosis factor production;0.0127206783331794!GO:0045408;regulation of interleukin-6 biosynthetic process;0.0127869901418347!GO:0042990;regulation of transcription factor import into nucleus;0.0130985186937159!GO:0042991;transcription factor import into nucleus;0.0130985186937159!GO:0051056;regulation of small GTPase mediated signal transduction;0.0139544116820623!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0139544116820623!GO:0000278;mitotic cell cycle;0.0139729628324614!GO:0042110;T cell activation;0.0139987844419912!GO:0051252;regulation of RNA metabolic process;0.0140648655039772!GO:0045259;proton-transporting ATP synthase complex;0.0141122099943956!GO:0004402;histone acetyltransferase activity;0.0143109991849905!GO:0004468;lysine N-acetyltransferase activity;0.0143109991849905!GO:0004004;ATP-dependent RNA helicase activity;0.0147045372738557!GO:0004721;phosphoprotein phosphatase activity;0.0147259443038757!GO:0009060;aerobic respiration;0.0147941810805912!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.015008940005143!GO:0017091;AU-rich element binding;0.0152924055511884!GO:0050779;RNA destabilization;0.0152924055511884!GO:0000289;poly(A) tail shortening;0.0152924055511884!GO:0009117;nucleotide metabolic process;0.0154703752601219!GO:0005996;monosaccharide metabolic process;0.0154703752601219!GO:0043405;regulation of MAP kinase activity;0.0154703752601219!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0163849695591941!GO:0045792;negative regulation of cell size;0.0164781845590237!GO:0033116;ER-Golgi intermediate compartment membrane;0.0165076081982267!GO:0007165;signal transduction;0.0165823555925665!GO:0048487;beta-tubulin binding;0.0172972544235512!GO:0032635;interleukin-6 production;0.0172972544235512!GO:0043623;cellular protein complex assembly;0.0174708912180868!GO:0002378;immunoglobulin biosynthetic process;0.017817042685821!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.017817042685821!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.017817042685821!GO:0005484;SNAP receptor activity;0.0178643690243183!GO:0007033;vacuole organization and biogenesis;0.0183930763123167!GO:0008624;induction of apoptosis by extracellular signals;0.0184323090780291!GO:0007259;JAK-STAT cascade;0.0188017478060816!GO:0001891;phagocytic cup;0.019029527384907!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0192359603180364!GO:0002819;regulation of adaptive immune response;0.0192359603180364!GO:0019864;IgG binding;0.0192359603180364!GO:0030308;negative regulation of cell growth;0.0192489004081923!GO:0005669;transcription factor TFIID complex;0.0193877696784648!GO:0030131;clathrin adaptor complex;0.0196249808939518!GO:0016505;apoptotic protease activator activity;0.0200530502950528!GO:0030522;intracellular receptor-mediated signaling pathway;0.0205233088684334!GO:0009611;response to wounding;0.0206688265326382!GO:0015923;mannosidase activity;0.0210235056869563!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.0210235056869563!GO:0042226;interleukin-6 biosynthetic process;0.0214732356022223!GO:0031980;mitochondrial lumen;0.0214732356022223!GO:0005759;mitochondrial matrix;0.0214732356022223!GO:0002252;immune effector process;0.0218340499857986!GO:0006405;RNA export from nucleus;0.0218762789307166!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0220302165548259!GO:0031098;stress-activated protein kinase signaling pathway;0.0220721762815522!GO:0045321;leukocyte activation;0.0220834243504691!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0240028775725198!GO:0030097;hemopoiesis;0.0246648412375014!GO:0045926;negative regulation of growth;0.0248598997668587!GO:0015934;large ribosomal subunit;0.025816606329172!GO:0006516;glycoprotein catabolic process;0.0265555928337401!GO:0001726;ruffle;0.0265804244374064!GO:0031072;heat shock protein binding;0.0265804244374064!GO:0051059;NF-kappaB binding;0.0268031625191029!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0268446946978641!GO:0045047;protein targeting to ER;0.0268446946978641!GO:0046834;lipid phosphorylation;0.0270500581603696!GO:0019901;protein kinase binding;0.0273357204636221!GO:0051049;regulation of transport;0.0275299470919112!GO:0008625;induction of apoptosis via death domain receptors;0.0275755564737319!GO:0000209;protein polyubiquitination;0.0276341284982074!GO:0050811;GABA receptor binding;0.0276341284982074!GO:0050900;leukocyte migration;0.0282201527879856!GO:0032386;regulation of intracellular transport;0.0285800271791132!GO:0001775;cell activation;0.0285886763436629!GO:0007005;mitochondrion organization and biogenesis;0.0286792879980167!GO:0006509;membrane protein ectodomain proteolysis;0.0286792879980167!GO:0033619;membrane protein proteolysis;0.0286792879980167!GO:0001817;regulation of cytokine production;0.0294564993296386!GO:0051251;positive regulation of lymphocyte activation;0.0295875599969198!GO:0030968;unfolded protein response;0.0300362584212079!GO:0030674;protein binding, bridging;0.0300971649158855!GO:0045646;regulation of erythrocyte differentiation;0.0303908396267646!GO:0046467;membrane lipid biosynthetic process;0.0303957730181586!GO:0008154;actin polymerization and/or depolymerization;0.0304672257853598!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.0305891294902893!GO:0048002;antigen processing and presentation of peptide antigen;0.0306621578693257!GO:0006458;'de novo' protein folding;0.0306621578693257!GO:0051084;'de novo' posttranslational protein folding;0.0306621578693257!GO:0006470;protein amino acid dephosphorylation;0.0311496051431141!GO:0030693;caspase activity;0.0311496051431141!GO:0051092;activation of NF-kappaB transcription factor;0.0317138696819388!GO:0008139;nuclear localization sequence binding;0.0317702996354476!GO:0045603;positive regulation of endothelial cell differentiation;0.0330702398663659!GO:0003682;chromatin binding;0.0331025979946717!GO:0043433;negative regulation of transcription factor activity;0.0334137205760134!GO:0012506;vesicle membrane;0.0334137205760134!GO:0002250;adaptive immune response;0.0338696371758262!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0338696371758262!GO:0004982;N-formyl peptide receptor activity;0.0340619933699519!GO:0019783;small conjugating protein-specific protease activity;0.0341101800809966!GO:0004860;protein kinase inhibitor activity;0.0342723763354234!GO:0030659;cytoplasmic vesicle membrane;0.0342777847436031!GO:0045113;regulation of integrin biosynthetic process;0.0350719888500055!GO:0045112;integrin biosynthetic process;0.0350719888500055!GO:0016671;oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor;0.0351089787813226!GO:0048500;signal recognition particle;0.0357371746500015!GO:0002440;production of molecular mediator of immune response;0.0357371746500015!GO:0030125;clathrin vesicle coat;0.0357752770046746!GO:0030665;clathrin coated vesicle membrane;0.0357752770046746!GO:0019210;kinase inhibitor activity;0.0358000365380965!GO:0030140;trans-Golgi network transport vesicle;0.0360689650674904!GO:0046934;phosphatidylinositol-4,5-bisphosphate 3-kinase activity;0.0360689650674904!GO:0043028;caspase regulator activity;0.0362305746246527!GO:0043300;regulation of leukocyte degranulation;0.036831457251696!GO:0050727;regulation of inflammatory response;0.0369326947042529!GO:0031347;regulation of defense response;0.0369326947042529!GO:0045576;mast cell activation;0.0373381074285601!GO:0032760;positive regulation of tumor necrosis factor production;0.0388060955158726!GO:0000060;protein import into nucleus, translocation;0.0393192062239208!GO:0031461;cullin-RING ubiquitin ligase complex;0.0400936786243212!GO:0016779;nucleotidyltransferase activity;0.0410670433334255!GO:0007254;JNK cascade;0.0415861706743856!GO:0004718;Janus kinase activity;0.0415861706743856!GO:0004177;aminopeptidase activity;0.0417327015159371!GO:0044255;cellular lipid metabolic process;0.0417327015159371!GO:0050871;positive regulation of B cell activation;0.0417327015159371!GO:0002682;regulation of immune system process;0.0417873400995897!GO:0045746;negative regulation of Notch signaling pathway;0.0421958837670785!GO:0030137;COPI-coated vesicle;0.0424351901475133!GO:0030149;sphingolipid catabolic process;0.0426756935196244!GO:0004702;receptor signaling protein serine/threonine kinase activity;0.0429041157769088!GO:0002253;activation of immune response;0.0429041157769088!GO:0001667;ameboidal cell migration;0.0430444367095951!GO:0032027;myosin light chain binding;0.0430444367095951!GO:0046488;phosphatidylinositol metabolic process;0.0432848125165748!GO:0002443;leukocyte mediated immunity;0.0433334536432322!GO:0006099;tricarboxylic acid cycle;0.0435767597064742!GO:0046356;acetyl-CoA catabolic process;0.0435767597064742!GO:0000118;histone deacetylase complex;0.0437219353087276!GO:0032763;regulation of mast cell cytokine production;0.0437219353087276!GO:0032762;mast cell cytokine production;0.0437219353087276!GO:0005521;lamin binding;0.0438019094250598!GO:0043507;positive regulation of JNK activity;0.0439202216775459!GO:0043407;negative regulation of MAP kinase activity;0.0445535659480003!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0446454743415367!GO:0046456;icosanoid biosynthetic process;0.0448024752851589!GO:0008312;7S RNA binding;0.0451317047245739!GO:0043299;leukocyte degranulation;0.0453711140354214!GO:0047485;protein N-terminus binding;0.0455194957645325!GO:0031301;integral to organelle membrane;0.0457757332159319!GO:0030867;rough endoplasmic reticulum membrane;0.0458520646990737!GO:0000082;G1/S transition of mitotic cell cycle;0.0460910320500335!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.046124474046795!GO:0051329;interphase of mitotic cell cycle;0.046244772938011!GO:0004843;ubiquitin-specific protease activity;0.0464237962608357!GO:0045309;protein phosphorylated amino acid binding;0.0469237236993319!GO:0019883;antigen processing and presentation of endogenous antigen;0.0470205509741103!GO:0005048;signal sequence binding;0.0477699934361952!GO:0005942;phosphoinositide 3-kinase complex;0.0485221863706528!GO:0019865;immunoglobulin binding;0.0496810815937942!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0497242775196561!GO:0017166;vinculin binding;0.0499647541659561!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.0499647541659561
|sample_id=11390
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
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|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11390-118C4;search_select_hide=table117:FF:11390-118C4
}}
}}

Latest revision as of 17:57, 4 June 2020

Name:Neutrophils, donor3
Species:Human (Homo sapiens)
Library ID:CNhs11905
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stage29 years old adult
sexfemale
age29
cell typeneutrophil
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNeu736
catalog number3H100-94-25
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004721
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11905 CAGE DRX008380 DRR009252
Accession ID Hg19

Library idBAMCTSS
CNhs11905 DRZ000677 DRZ002062
Accession ID Hg38

Library idBAMCTSS
CNhs11905 DRZ012027 DRZ013412
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004721
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10013.CAGATC sRNA-Seq DRX037208 DRR041574
Accession ID Hg19

Library idBAMCTSS
SRhi10013.CAGATC DRZ007216


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.183
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.405
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.452
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0414
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.151
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.647
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.151
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.262
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.151
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40.151
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural1.178
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.931
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.383
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.262
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast1.224
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.325
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.197
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.159
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.151
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.816
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory1.543
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.87
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole1.06
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.495
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.151
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.137
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.151
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.542
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.396
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.709
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.612
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.591
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.894
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood1.185
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.897
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.542
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11905

Jaspar motifP-value
MA0002.22.44277e-13
MA0003.10.234
MA0004.10.49
MA0006.10.362
MA0007.10.473
MA0009.10.113
MA0014.10.639
MA0017.10.151
MA0018.21.98783e-4
MA0019.10.534
MA0024.10.00227
MA0025.11.47707e-4
MA0027.10.789
MA0028.10.664
MA0029.10.436
MA0030.14.95949e-5
MA0031.10.0013
MA0035.20.91
MA0038.10.0903
MA0039.20.726
MA0040.10.0105
MA0041.10.332
MA0042.10.0677
MA0043.15.61227e-14
MA0046.10.194
MA0047.20.0586
MA0048.10.658
MA0050.17.1593e-5
MA0051.10.037
MA0052.10.0777
MA0055.10.0577
MA0057.10.26
MA0058.10.493
MA0059.10.385
MA0060.14.94136e-6
MA0061.14.31212e-10
MA0062.29.07635e-4
MA0065.20.0955
MA0066.10.0843
MA0067.11.81026e-4
MA0068.10.968
MA0069.10.527
MA0070.10.0429
MA0071.10.318
MA0072.10.904
MA0073.10.192
MA0074.10.381
MA0076.10.938
MA0077.10.282
MA0078.10.522
MA0079.20.747
MA0080.25.16442e-16
MA0081.12.16744e-5
MA0083.10.219
MA0084.10.971
MA0087.10.626
MA0088.10.112
MA0090.10.106
MA0091.10.804
MA0092.10.599
MA0093.10.374
MA0099.24.69803e-9
MA0100.10.939
MA0101.11.73674e-10
MA0102.21.56598e-15
MA0103.10.988
MA0104.20.12
MA0105.11.29583e-9
MA0106.10.186
MA0107.15.74117e-13
MA0108.20.00151
MA0111.10.474
MA0112.20.0149
MA0113.10.725
MA0114.10.619
MA0115.10.631
MA0116.10.00323
MA0117.10.0664
MA0119.10.953
MA0122.10.414
MA0124.10.738
MA0125.10.203
MA0131.10.804
MA0135.10.15
MA0136.11.31327e-20
MA0137.20.0107
MA0138.20.412
MA0139.10.981
MA0140.10.697
MA0141.10.159
MA0142.10.805
MA0143.10.738
MA0144.10.0103
MA0145.10.212
MA0146.10.135
MA0147.10.0847
MA0148.10.317
MA0149.10.956
MA0150.12.57977e-12
MA0152.10.0613
MA0153.10.164
MA0154.10.00291
MA0155.10.596
MA0156.18.8347e-15
MA0157.10.0102
MA0159.10.0515
MA0160.10.055
MA0162.10.971
MA0163.10.0182
MA0164.10.753
MA0258.10.0517
MA0259.10.115



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11905

Novel motifP-value
10.285
100.0797
1000.253
1010.667
1020.832
1030.175
1040.666
1050.34
1062.99429e-4
1070.509
1080.429
1090.253
110.245
1100.671
1110.383
1120.361
1130.47
1140.0292
1150.553
1160.606
1170.0183
1180.144
1190.532
120.436
1200.653
1210.604
1220.85
1230.519
1240.84
1250.225
1260.118
1270.433
1280.0148
1290.807
130.556
1300.634
1310.767
1320.0787
1330.785
1340.506
1350.211
1360.581
1373.74809e-4
1380.148
1390.164
140.259
1400.51
1410.338
1420.484
1430.0252
1440.889
1450.943
1460.407
1470.49
1480.0665
1490.619
150.0713
1500.644
1510.378
1520.162
1530.433
1540.858
1550.147
1560.454
1570.697
1580.00724
1590.453
160.508
1600.612
1610.956
1620.14
1630.562
1640.17
1650.181
1660.929
1670.796
1680.528
1690.0967
170.352
180.157
190.377
20.923
200.619
210.908
220.164
230.00572
240.355
250.251
260.162
270.623
280.265
290.438
30.301
300.767
310.758
320.537
330.302
340.588
350.137
360.34
370.224
380.482
390.779
40.607
400.626
410.00445
420.573
430.0599
440.943
450.435
460.398
470.658
480.755
490.155
50.129
500.983
510.358
520.221
530.429
540.286
550.706
560.66
570.48
580.138
590.0882
60.735
600.0181
610.323
620.0382
630.742
640.569
650.272
660.206
670.556
680.269
690.847
70.279
700.187
710.0557
720.463
730.297
740.0732
750.209
760.242
770.853
780.292
790.515
80.677
800.028
810.41
820.0367
830.306
840.775
850.0677
860.0283
870.424
880.594
890.106
90.161
900.122
910.408
920.226
930.445
940.0509
950.711
960.43
970.971
980.172
990.0124



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11905


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000081 (blood cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000094 (granulocyte)
0000775 (neutrophil)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000122 (human neutrophil sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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