FF:11354-117H4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005116 | ||
|ancestors_in_cell_lineage_facet=CL:0000000 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005116 | ||
|accession_numbers=CAGE;DRX008393;DRR009265;DRZ000690;DRZ002075;DRZ012040;DRZ013425 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037052;DRR041418;DRZ007060 | |||
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000055,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000062 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000127,FF:0000128 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Osteoblast%252c%2520donor2.CNhs11385.11354-117H4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Osteoblast%252c%2520donor2.CNhs11385.11354-117H4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Osteoblast%252c%2520donor2.CNhs11385.11354-117H4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Osteoblast%252c%2520donor2.CNhs11385.11354-117H4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Osteoblast%252c%2520donor2.CNhs11385.11354-117H4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11354-117H4 | |id=FF:11354-117H4 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000127;;FF:0000128 | ||
|is_obsolete= | |||
|library_id=CNhs11385 | |||
|library_id_phase_based=2:CNhs11385 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11354 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10004.CGTACG.11354 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11354 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10004.CGTACG.11354 | |||
|name=Osteoblast, donor2 | |name=Osteoblast, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11385,LSID771,release012,COMPLETED | |profile_hcage=CNhs11385,LSID771,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10004,,, | |profile_srnaseq=SRhi10004,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.272839533358499,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.207347961920629,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.221212197891035,0,0,0,0.12421983664843,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0584468268118252,0.0829422661568527,0,0.367067139814408,0,0,0.269031788576702,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.154187968871398,-0.193090555725052,0,0,0,0,0,0 | |||
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| |||
|rna_box=117 | |rna_box=117 | ||
|rna_catalog_number=CA406-R10f | |rna_catalog_number=CA406-R10f | ||
| Line 56: | Line 82: | ||
|rna_tube_id=117H4 | |rna_tube_id=117H4 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10004.CGTACG | |||
|sample_age=embryo 22week | |sample_age=embryo 22week | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=U | |sample_ethnicity=U | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.28546642427268e-241!GO:0043226;organelle;3.44933404554594e-199!GO:0043229;intracellular organelle;7.06394130850015e-199!GO:0043231;intracellular membrane-bound organelle;1.44059221307484e-193!GO:0043227;membrane-bound organelle;3.23307565346004e-193!GO:0005737;cytoplasm;1.52645165759765e-176!GO:0044422;organelle part;7.84596587587991e-152!GO:0044446;intracellular organelle part;2.17827680893141e-150!GO:0044444;cytoplasmic part;2.39329727245272e-121!GO:0032991;macromolecular complex;7.79994941634091e-108!GO:0044237;cellular metabolic process;5.64788733535517e-91!GO:0044238;primary metabolic process;1.82434717848459e-90!GO:0030529;ribonucleoprotein complex;1.69448296763199e-87!GO:0043170;macromolecule metabolic process;2.29695427270859e-87!GO:0005634;nucleus;8.0226697414517e-85!GO:0005515;protein binding;7.49096964483991e-83!GO:0044428;nuclear part;1.68355454628115e-77!GO:0043233;organelle lumen;5.41138287398335e-75!GO:0031974;membrane-enclosed lumen;5.41138287398335e-75!GO:0003723;RNA binding;1.51280348371662e-73!GO:0005739;mitochondrion;8.5948261764659e-58!GO:0043234;protein complex;1.4711483943178e-55!GO:0016043;cellular component organization and biogenesis;6.41809704478284e-55!GO:0006396;RNA processing;1.87775277471394e-51!GO:0005840;ribosome;6.41779691977787e-50!GO:0043283;biopolymer metabolic process;8.66652944342676e-50!GO:0019538;protein metabolic process;1.15232305621362e-48!GO:0006412;translation;7.41959668026419e-48!GO:0031090;organelle membrane;3.14409439927817e-46!GO:0031981;nuclear lumen;5.73548720529951e-46!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;9.75413008309744e-44!GO:0003735;structural constituent of ribosome;1.48501171367382e-43!GO:0044260;cellular macromolecule metabolic process;1.80985408094738e-43!GO:0033036;macromolecule localization;2.61796302466591e-43!GO:0010467;gene expression;2.87774400116854e-43!GO:0044267;cellular protein metabolic process;7.28587692972046e-43!GO:0015031;protein transport;2.14304173210525e-42!GO:0043228;non-membrane-bound organelle;4.81898012556984e-41!GO:0043232;intracellular non-membrane-bound organelle;4.81898012556984e-41!GO:0016071;mRNA metabolic process;5.90137911166606e-41!GO:0008104;protein localization;1.84868479587053e-39!GO:0045184;establishment of protein localization;2.33478765480173e-39!GO:0044429;mitochondrial part;4.31432620968894e-39!GO:0009058;biosynthetic process;5.91379874635312e-38!GO:0033279;ribosomal subunit;6.28713455291622e-38!GO:0006996;organelle organization and biogenesis;1.63096375540601e-37!GO:0005829;cytosol;1.65014688456765e-37!GO:0009059;macromolecule biosynthetic process;2.25189340961089e-37!GO:0008380;RNA splicing;2.47113119690796e-37!GO:0006397;mRNA processing;3.44739992916061e-36!GO:0044249;cellular biosynthetic process;4.39709045034215e-36!GO:0031967;organelle envelope;8.01135636306547e-36!GO:0046907;intracellular transport;9.22855517048697e-36!GO:0031975;envelope;1.76022834416419e-35!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.45017194723783e-33!GO:0006259;DNA metabolic process;2.05592196411419e-32!GO:0065003;macromolecular complex assembly;4.42755521128008e-32!GO:0007049;cell cycle;9.10073304204914e-30!GO:0006886;intracellular protein transport;7.36237526325964e-29!GO:0022607;cellular component assembly;1.12697613327338e-28!GO:0005654;nucleoplasm;2.81817493249348e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.97742783803793e-28!GO:0005681;spliceosome;9.19809829722335e-27!GO:0000166;nucleotide binding;4.43759886747231e-26!GO:0003676;nucleic acid binding;3.01902308984412e-25!GO:0000278;mitotic cell cycle;1.33673040654379e-24!GO:0005740;mitochondrial envelope;3.9646387266723e-24!GO:0051641;cellular localization;2.54894017703982e-23!GO:0051649;establishment of cellular localization;2.82376255985319e-23!GO:0022402;cell cycle process;3.42425496918186e-23!GO:0016462;pyrophosphatase activity;4.41545681907512e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.93766523883662e-23!GO:0044451;nucleoplasm part;9.04432985016245e-23!GO:0044445;cytosolic part;1.07941777556356e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;1.20536640024854e-22!GO:0031966;mitochondrial membrane;1.28978263983744e-22!GO:0017111;nucleoside-triphosphatase activity;3.04371265964797e-22!GO:0019866;organelle inner membrane;8.33050218466683e-22!GO:0006457;protein folding;2.08467650646901e-21!GO:0012505;endomembrane system;1.61498881557343e-20!GO:0005743;mitochondrial inner membrane;9.14426540215498e-20!GO:0015934;large ribosomal subunit;1.47748819522351e-19!GO:0006119;oxidative phosphorylation;2.18523788168167e-19!GO:0016070;RNA metabolic process;2.74278976920034e-19!GO:0015935;small ribosomal subunit;3.60531700383751e-19!GO:0032553;ribonucleotide binding;5.62301228747211e-19!GO:0032555;purine ribonucleotide binding;5.62301228747211e-19!GO:0000087;M phase of mitotic cell cycle;6.39421481286395e-19!GO:0022618;protein-RNA complex assembly;6.89281615796204e-19!GO:0005783;endoplasmic reticulum;9.28709480177571e-19!GO:0005730;nucleolus;1.31387050525549e-18!GO:0017076;purine nucleotide binding;1.32811230823381e-18!GO:0007067;mitosis;1.38936912669682e-18!GO:0005694;chromosome;1.94834909393644e-18!GO:0022403;cell cycle phase;4.20526827476327e-18!GO:0048770;pigment granule;5.99818730801625e-18!GO:0042470;melanosome;5.99818730801625e-18!GO:0031980;mitochondrial lumen;9.86513935499798e-18!GO:0005759;mitochondrial matrix;9.86513935499798e-18!GO:0016874;ligase activity;1.19538767553895e-17!GO:0006974;response to DNA damage stimulus;1.75965741620615e-17!GO:0044455;mitochondrial membrane part;7.03797534848495e-17!GO:0051301;cell division;1.34790845872987e-16!GO:0044427;chromosomal part;1.46628415677214e-16!GO:0005524;ATP binding;1.57950286842733e-16!GO:0008135;translation factor activity, nucleic acid binding;2.89560803057843e-16!GO:0005794;Golgi apparatus;3.82061677844247e-16!GO:0044432;endoplasmic reticulum part;4.23997239858598e-16!GO:0032559;adenyl ribonucleotide binding;5.25089978314183e-16!GO:0008134;transcription factor binding;5.29334597189455e-16!GO:0044265;cellular macromolecule catabolic process;6.87967066117666e-16!GO:0006512;ubiquitin cycle;9.58138467722611e-16!GO:0051276;chromosome organization and biogenesis;1.9410373627374e-15!GO:0030554;adenyl nucleotide binding;1.98819288324606e-15!GO:0042254;ribosome biogenesis and assembly;3.4065453228558e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.32115148694976e-15!GO:0000279;M phase;5.10456751967088e-15!GO:0006605;protein targeting;6.46131899191521e-15!GO:0048193;Golgi vesicle transport;1.06217607522861e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.2671268561729e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.50031344013642e-14!GO:0043285;biopolymer catabolic process;1.70839457686127e-14!GO:0006281;DNA repair;1.97798279113078e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.24356319398939e-14!GO:0019941;modification-dependent protein catabolic process;2.28357185609678e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.28357185609678e-14!GO:0044257;cellular protein catabolic process;3.45089921315135e-14!GO:0051082;unfolded protein binding;3.50745009004388e-14!GO:0005761;mitochondrial ribosome;3.66683971608086e-14!GO:0000313;organellar ribosome;3.66683971608086e-14!GO:0009057;macromolecule catabolic process;5.59601459938877e-14!GO:0009719;response to endogenous stimulus;7.10916697548852e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.11091527886619e-14!GO:0005746;mitochondrial respiratory chain;9.13296998550126e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.37669129232941e-14!GO:0000375;RNA splicing, via transesterification reactions;9.37669129232941e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.37669129232941e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.28386034438188e-13!GO:0043412;biopolymer modification;2.45441592696847e-13!GO:0051186;cofactor metabolic process;2.85447930722939e-13!GO:0003743;translation initiation factor activity;7.90861178438553e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.03691797555658e-12!GO:0003954;NADH dehydrogenase activity;1.03691797555658e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.03691797555658e-12!GO:0044453;nuclear membrane part;1.20153766853358e-12!GO:0031965;nuclear membrane;1.40875990955199e-12!GO:0016887;ATPase activity;1.43354518452022e-12!GO:0030163;protein catabolic process;1.9248543233945e-12!GO:0006260;DNA replication;1.9886529023424e-12!GO:0005635;nuclear envelope;2.16837023273128e-12!GO:0044248;cellular catabolic process;4.52290141988604e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;4.56544685231843e-12!GO:0042623;ATPase activity, coupled;5.68146627284199e-12!GO:0005793;ER-Golgi intermediate compartment;6.27453871526581e-12!GO:0006413;translational initiation;6.67755348126873e-12!GO:0051726;regulation of cell cycle;9.53580085524185e-12!GO:0000074;regulation of progression through cell cycle;1.0913406398964e-11!GO:0006464;protein modification process;1.17394838304224e-11!GO:0006323;DNA packaging;1.53116912461114e-11!GO:0016192;vesicle-mediated transport;1.69830197185964e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.94633066265823e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.19270684690141e-11!GO:0006913;nucleocytoplasmic transport;4.3346300071863e-11!GO:0042775;organelle ATP synthesis coupled electron transport;5.77865022166588e-11!GO:0042773;ATP synthesis coupled electron transport;5.77865022166588e-11!GO:0016604;nuclear body;6.37536520789244e-11!GO:0030964;NADH dehydrogenase complex (quinone);7.70935733265283e-11!GO:0045271;respiratory chain complex I;7.70935733265283e-11!GO:0005747;mitochondrial respiratory chain complex I;7.70935733265283e-11!GO:0009259;ribonucleotide metabolic process;9.63120071722486e-11!GO:0051169;nuclear transport;1.05709098529947e-10!GO:0006732;coenzyme metabolic process;1.24662324108469e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.41571971404667e-10!GO:0003712;transcription cofactor activity;1.50582594953486e-10!GO:0005789;endoplasmic reticulum membrane;1.53424201938293e-10!GO:0004386;helicase activity;1.86632520129179e-10!GO:0006366;transcription from RNA polymerase II promoter;2.60488690144124e-10!GO:0005643;nuclear pore;2.70619277006875e-10!GO:0006446;regulation of translational initiation;3.397389605409e-10!GO:0043687;post-translational protein modification;4.14735379045783e-10!GO:0006163;purine nucleotide metabolic process;4.66019672205889e-10!GO:0065004;protein-DNA complex assembly;6.50463578090477e-10!GO:0015630;microtubule cytoskeleton;6.8616495253928e-10!GO:0009150;purine ribonucleotide metabolic process;7.62995078549283e-10!GO:0006364;rRNA processing;7.98527643154411e-10!GO:0008026;ATP-dependent helicase activity;1.02610864771599e-09!GO:0009260;ribonucleotide biosynthetic process;1.66483812176477e-09!GO:0016072;rRNA metabolic process;1.69056255772597e-09!GO:0006399;tRNA metabolic process;1.81886513079456e-09!GO:0065002;intracellular protein transport across a membrane;2.08364183510514e-09!GO:0000785;chromatin;2.36971599324066e-09!GO:0008565;protein transporter activity;2.76398116103341e-09!GO:0048523;negative regulation of cellular process;2.78206074669591e-09!GO:0006333;chromatin assembly or disassembly;2.86540048676112e-09!GO:0006164;purine nucleotide biosynthetic process;2.99383119099554e-09!GO:0006403;RNA localization;3.19395028757228e-09!GO:0050657;nucleic acid transport;3.79475518057712e-09!GO:0051236;establishment of RNA localization;3.79475518057712e-09!GO:0050658;RNA transport;3.79475518057712e-09!GO:0006888;ER to Golgi vesicle-mediated transport;3.82196447531591e-09!GO:0008639;small protein conjugating enzyme activity;3.91727885954914e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.67774917997573e-09!GO:0009152;purine ribonucleotide biosynthetic process;4.67774917997573e-09!GO:0009055;electron carrier activity;4.67774917997573e-09!GO:0019787;small conjugating protein ligase activity;4.98658354571831e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.68164095590135e-09!GO:0016607;nuclear speck;6.00128517527336e-09!GO:0009141;nucleoside triphosphate metabolic process;6.38139119664176e-09!GO:0009199;ribonucleoside triphosphate metabolic process;6.9006007141991e-09!GO:0004842;ubiquitin-protein ligase activity;7.25657344200175e-09!GO:0046930;pore complex;7.33985789973239e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.28024073594544e-09!GO:0004812;aminoacyl-tRNA ligase activity;8.28024073594544e-09!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.28024073594544e-09!GO:0012501;programmed cell death;1.31815824237243e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.54282666724674e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.54282666724674e-08!GO:0043038;amino acid activation;1.67619636333529e-08!GO:0006418;tRNA aminoacylation for protein translation;1.67619636333529e-08!GO:0043039;tRNA aminoacylation;1.67619636333529e-08!GO:0030120;vesicle coat;1.83454401090245e-08!GO:0030662;coated vesicle membrane;1.83454401090245e-08!GO:0005788;endoplasmic reticulum lumen;2.00019251756199e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.59523360899763e-08!GO:0017038;protein import;2.65957042169465e-08!GO:0006915;apoptosis;2.70927596716386e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.9948619919129e-08!GO:0005819;spindle;4.26440734872147e-08!GO:0006334;nucleosome assembly;4.33305623829438e-08!GO:0009060;aerobic respiration;4.70835955380571e-08!GO:0006461;protein complex assembly;4.85041022787492e-08!GO:0043566;structure-specific DNA binding;5.25429295710947e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.7961344261024e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.7961344261024e-08!GO:0050794;regulation of cellular process;6.94042844117676e-08!GO:0044431;Golgi apparatus part;7.60824913354629e-08!GO:0016881;acid-amino acid ligase activity;8.0963820273339e-08!GO:0015986;ATP synthesis coupled proton transport;8.30025235153121e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.30025235153121e-08!GO:0045333;cellular respiration;8.58635172952224e-08!GO:0046034;ATP metabolic process;1.10290539262866e-07!GO:0003924;GTPase activity;1.11098720500635e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.32389420040375e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.32389420040375e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.32389420040375e-07!GO:0031497;chromatin assembly;1.34361118601354e-07!GO:0008219;cell death;1.47978885314938e-07!GO:0016265;death;1.47978885314938e-07!GO:0048519;negative regulation of biological process;1.72074450938259e-07!GO:0048475;coated membrane;1.81438830581722e-07!GO:0030117;membrane coat;1.81438830581722e-07!GO:0016740;transferase activity;2.06049108436503e-07!GO:0051028;mRNA transport;2.17023708782575e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.19193006306371e-07!GO:0031324;negative regulation of cellular metabolic process;2.62284955109997e-07!GO:0000775;chromosome, pericentric region;2.75812414049406e-07!GO:0003697;single-stranded DNA binding;3.20805959224283e-07!GO:0005667;transcription factor complex;3.49801003628101e-07!GO:0019829;cation-transporting ATPase activity;3.57837327341446e-07!GO:0006099;tricarboxylic acid cycle;5.17634228940273e-07!GO:0046356;acetyl-CoA catabolic process;5.17634228940273e-07!GO:0051246;regulation of protein metabolic process;5.53527897745252e-07!GO:0051329;interphase of mitotic cell cycle;6.0396826059809e-07!GO:0016568;chromatin modification;6.59356539422572e-07!GO:0016853;isomerase activity;8.12992135556709e-07!GO:0005813;centrosome;8.53981209961374e-07!GO:0006754;ATP biosynthetic process;8.62925440279692e-07!GO:0006753;nucleoside phosphate metabolic process;8.62925440279692e-07!GO:0032446;protein modification by small protein conjugation;8.84329282740515e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.84579171935622e-07!GO:0009109;coenzyme catabolic process;1.0602537847513e-06!GO:0005798;Golgi-associated vesicle;1.12585048833006e-06!GO:0007051;spindle organization and biogenesis;1.29699511064631e-06!GO:0016567;protein ubiquitination;1.31286314822559e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.46332097579813e-06!GO:0006793;phosphorus metabolic process;1.48982334607748e-06!GO:0006796;phosphate metabolic process;1.48982334607748e-06!GO:0051325;interphase;1.51960866252111e-06!GO:0006084;acetyl-CoA metabolic process;1.56742261177122e-06!GO:0009056;catabolic process;1.65030465405018e-06!GO:0051187;cofactor catabolic process;1.65386986995145e-06!GO:0005815;microtubule organizing center;1.674240840582e-06!GO:0009117;nucleotide metabolic process;1.72740134411835e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.77825344860828e-06!GO:0000245;spliceosome assembly;2.22357395655325e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.28019339240738e-06!GO:0051188;cofactor biosynthetic process;2.30348290154163e-06!GO:0006613;cotranslational protein targeting to membrane;3.15483563266495e-06!GO:0016310;phosphorylation;3.32740003576626e-06!GO:0000151;ubiquitin ligase complex;3.4938355577896e-06!GO:0007005;mitochondrion organization and biogenesis;4.11541636185011e-06!GO:0000075;cell cycle checkpoint;4.11541636185011e-06!GO:0003714;transcription corepressor activity;4.44281260764442e-06!GO:0005768;endosome;4.4841867234319e-06!GO:0016779;nucleotidyltransferase activity;5.4472319212443e-06!GO:0000139;Golgi membrane;5.48259823895233e-06!GO:0009892;negative regulation of metabolic process;6.11391363125698e-06!GO:0045259;proton-transporting ATP synthase complex;6.93134671143611e-06!GO:0051170;nuclear import;6.96952295705529e-06!GO:0007010;cytoskeleton organization and biogenesis;7.6475953644823e-06!GO:0016563;transcription activator activity;7.73531180281046e-06!GO:0006606;protein import into nucleus;8.20781227499776e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.36596794489659e-06!GO:0006261;DNA-dependent DNA replication;8.73038378382759e-06!GO:0006752;group transfer coenzyme metabolic process;9.82387031308734e-06!GO:0043067;regulation of programmed cell death;1.04447783224767e-05!GO:0045786;negative regulation of progression through cell cycle;1.14260995511675e-05!GO:0016859;cis-trans isomerase activity;1.21331657280608e-05!GO:0042981;regulation of apoptosis;1.26394528884152e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.29076735119441e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.29645953859091e-05!GO:0016564;transcription repressor activity;1.78563775458084e-05!GO:0016491;oxidoreductase activity;1.8419620359703e-05!GO:0008361;regulation of cell size;1.94614819166004e-05!GO:0005525;GTP binding;2.05928286967395e-05!GO:0043623;cellular protein complex assembly;2.1014031408602e-05!GO:0031252;leading edge;2.21748995107717e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.30442379837178e-05!GO:0016049;cell growth;2.30442379837178e-05!GO:0030867;rough endoplasmic reticulum membrane;2.40135022205143e-05!GO:0005762;mitochondrial large ribosomal subunit;2.40135022205143e-05!GO:0000315;organellar large ribosomal subunit;2.40135022205143e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.44909430990278e-05!GO:0016787;hydrolase activity;2.58631809582007e-05!GO:0003724;RNA helicase activity;2.69502652028159e-05!GO:0050789;regulation of biological process;2.75007682028497e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.77460601447183e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.77529231886394e-05!GO:0003899;DNA-directed RNA polymerase activity;2.9357204484387e-05!GO:0031988;membrane-bound vesicle;2.97683006027281e-05!GO:0009108;coenzyme biosynthetic process;3.8263796493414e-05!GO:0043069;negative regulation of programmed cell death;3.9455798370474e-05!GO:0043021;ribonucleoprotein binding;3.96321320795523e-05!GO:0019222;regulation of metabolic process;4.36863393683206e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.61490563661437e-05!GO:0019843;rRNA binding;4.86226737940782e-05!GO:0044440;endosomal part;5.04775980018702e-05!GO:0010008;endosome membrane;5.04775980018702e-05!GO:0019867;outer membrane;5.30358856922036e-05!GO:0019899;enzyme binding;5.52891485752211e-05!GO:0051789;response to protein stimulus;6.57434518907476e-05!GO:0006986;response to unfolded protein;6.57434518907476e-05!GO:0031968;organelle outer membrane;7.31453792193294e-05!GO:0003713;transcription coactivator activity;7.37499113819421e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.52339254506173e-05!GO:0045454;cell redox homeostasis;7.56425429587516e-05!GO:0005657;replication fork;7.70444398516636e-05!GO:0016481;negative regulation of transcription;8.13472597975287e-05!GO:0008094;DNA-dependent ATPase activity;8.3422336587295e-05!GO:0043066;negative regulation of apoptosis;9.19099627735081e-05!GO:0005770;late endosome;9.5981510683033e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000106781944659867!GO:0001558;regulation of cell growth;0.00010865388393227!GO:0006916;anti-apoptosis;0.000109140649447541!GO:0004298;threonine endopeptidase activity;0.0001124819912561!GO:0051427;hormone receptor binding;0.00014763194191397!GO:0032561;guanyl ribonucleotide binding;0.000152406774451494!GO:0019001;guanyl nucleotide binding;0.000152406774451494!GO:0030133;transport vesicle;0.000153961946144664!GO:0008654;phospholipid biosynthetic process;0.000153961946144664!GO:0005048;signal sequence binding;0.000162999407076043!GO:0031982;vesicle;0.000163210649794281!GO:0015980;energy derivation by oxidation of organic compounds;0.000182045822268508!GO:0031410;cytoplasmic vesicle;0.000184444177949385!GO:0016363;nuclear matrix;0.000186217664548249!GO:0030663;COPI coated vesicle membrane;0.000202336646164583!GO:0030126;COPI vesicle coat;0.000202336646164583!GO:0051168;nuclear export;0.000217133560654804!GO:0000776;kinetochore;0.000222441209004859!GO:0003682;chromatin binding;0.000227322531667838!GO:0033116;ER-Golgi intermediate compartment membrane;0.000241248310944329!GO:0005741;mitochondrial outer membrane;0.000249276298574936!GO:0030036;actin cytoskeleton organization and biogenesis;0.000251130605552631!GO:0003690;double-stranded DNA binding;0.000256293287675613!GO:0006612;protein targeting to membrane;0.000268976540752134!GO:0005885;Arp2/3 protein complex;0.00028543563876008!GO:0006302;double-strand break repair;0.000287584592923364!GO:0035257;nuclear hormone receptor binding;0.000298176516136903!GO:0008250;oligosaccharyl transferase complex;0.000321980921322012!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000345844154056463!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000352491605661185!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000368831126305601!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000368831126305601!GO:0000314;organellar small ribosomal subunit;0.000368831126305601!GO:0005763;mitochondrial small ribosomal subunit;0.000368831126305601!GO:0006091;generation of precursor metabolites and energy;0.000398094526321813!GO:0007059;chromosome segregation;0.000398094526321813!GO:0005905;coated pit;0.000434711004369448!GO:0004576;oligosaccharyl transferase activity;0.000458012504843391!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000478857253361732!GO:0030137;COPI-coated vesicle;0.000535958215080128!GO:0007093;mitotic cell cycle checkpoint;0.000546357404352261!GO:0048522;positive regulation of cellular process;0.000580280498789621!GO:0003678;DNA helicase activity;0.000597456861073753!GO:0005874;microtubule;0.000603886992458302!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00065387452869695!GO:0007052;mitotic spindle organization and biogenesis;0.00068278994653401!GO:0000082;G1/S transition of mitotic cell cycle;0.000709068889620368!GO:0044262;cellular carbohydrate metabolic process;0.000713690232034995!GO:0000786;nucleosome;0.000719492265255057!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000727919087063186!GO:0008186;RNA-dependent ATPase activity;0.000732176861714544!GO:0044452;nucleolar part;0.000741581558460579!GO:0000059;protein import into nucleus, docking;0.000775333936935829!GO:0006626;protein targeting to mitochondrion;0.000783252651064037!GO:0003729;mRNA binding;0.00079383034061385!GO:0018196;peptidyl-asparagine modification;0.000831206471530552!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000831206471530552!GO:0007088;regulation of mitosis;0.000839619392102512!GO:0051052;regulation of DNA metabolic process;0.00087868391473362!GO:0009165;nucleotide biosynthetic process;0.000890252847407484!GO:0048500;signal recognition particle;0.000902896164862603!GO:0051920;peroxiredoxin activity;0.000984298795221729!GO:0005769;early endosome;0.001004408997167!GO:0008092;cytoskeletal protein binding;0.00102310343418283!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00103858734001568!GO:0006383;transcription from RNA polymerase III promoter;0.00105277979361548!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00111187315635491!GO:0043681;protein import into mitochondrion;0.00111469421162498!GO:0051252;regulation of RNA metabolic process;0.00114503002458428!GO:0005773;vacuole;0.00120393617534627!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00121253988233575!GO:0003684;damaged DNA binding;0.00121957572252677!GO:0006310;DNA recombination;0.00125895648864358!GO:0005791;rough endoplasmic reticulum;0.0015035508177123!GO:0030029;actin filament-based process;0.00155305574357003!GO:0007050;cell cycle arrest;0.00161016376233866!GO:0030658;transport vesicle membrane;0.00183118152737498!GO:0007006;mitochondrial membrane organization and biogenesis;0.00188872668779284!GO:0004004;ATP-dependent RNA helicase activity;0.00191226200802643!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00197634074320217!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00197634074320217!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00197634074320217!GO:0031072;heat shock protein binding;0.00200015292887479!GO:0030134;ER to Golgi transport vesicle;0.0020070255964219!GO:0065009;regulation of a molecular function;0.00214921440404508!GO:0005684;U2-dependent spliceosome;0.00216740945460132!GO:0008312;7S RNA binding;0.00223349820331882!GO:0006891;intra-Golgi vesicle-mediated transport;0.00225565048996889!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00228215706410252!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00234614447124027!GO:0045047;protein targeting to ER;0.00234614447124027!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00234641986373609!GO:0015399;primary active transmembrane transporter activity;0.00234641986373609!GO:0051087;chaperone binding;0.00261725422266536!GO:0007017;microtubule-based process;0.00273213312428989!GO:0006352;transcription initiation;0.00282704536535457!GO:0006402;mRNA catabolic process;0.00292818738707798!GO:0040008;regulation of growth;0.00294174017667944!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00295320133347454!GO:0031323;regulation of cellular metabolic process;0.00295763588519978!GO:0015631;tubulin binding;0.00296150485125357!GO:0030127;COPII vesicle coat;0.00306055141612851!GO:0012507;ER to Golgi transport vesicle membrane;0.00306055141612851!GO:0007243;protein kinase cascade;0.00306938289804453!GO:0004527;exonuclease activity;0.00308857577606732!GO:0030521;androgen receptor signaling pathway;0.00320057111189834!GO:0046474;glycerophospholipid biosynthetic process;0.00320425868705811!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00349211316555557!GO:0030880;RNA polymerase complex;0.00351698362436204!GO:0006839;mitochondrial transport;0.00363484892416272!GO:0030132;clathrin coat of coated pit;0.00374437053046195!GO:0008022;protein C-terminus binding;0.00374437053046195!GO:0031543;peptidyl-proline dioxygenase activity;0.00374437053046195!GO:0006414;translational elongation;0.00392756387959273!GO:0048471;perinuclear region of cytoplasm;0.00394856753431096!GO:0008180;signalosome;0.004055053188045!GO:0006401;RNA catabolic process;0.00420506875879403!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00439981803994238!GO:0000910;cytokinesis;0.00447427555074882!GO:0005876;spindle microtubule;0.00451919925556667!GO:0008168;methyltransferase activity;0.00468615057145773!GO:0031124;mRNA 3'-end processing;0.00471056111580609!GO:0004674;protein serine/threonine kinase activity;0.00495651289029221!GO:0030660;Golgi-associated vesicle membrane;0.00501352130585771!GO:0006595;polyamine metabolic process;0.00505844801242616!GO:0005637;nuclear inner membrane;0.00509248562188882!GO:0042802;identical protein binding;0.00513190540265316!GO:0016044;membrane organization and biogenesis;0.00519231957212505!GO:0043488;regulation of mRNA stability;0.00522713776343532!GO:0043487;regulation of RNA stability;0.00522713776343532!GO:0016741;transferase activity, transferring one-carbon groups;0.00539479141224356!GO:0000323;lytic vacuole;0.0056641985283753!GO:0005764;lysosome;0.0056641985283753!GO:0000339;RNA cap binding;0.00567291914814943!GO:0005869;dynactin complex;0.0057809027255355!GO:0051128;regulation of cellular component organization and biogenesis;0.00588470195450106!GO:0032508;DNA duplex unwinding;0.00588470195450106!GO:0032392;DNA geometric change;0.00588470195450106!GO:0017166;vinculin binding;0.00612687871226404!GO:0045892;negative regulation of transcription, DNA-dependent;0.00629775185095946!GO:0000049;tRNA binding;0.0063152554735121!GO:0016408;C-acyltransferase activity;0.00648878831364189!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00649988078418692!GO:0006275;regulation of DNA replication;0.00649988078418692!GO:0030118;clathrin coat;0.00697623258833215!GO:0045941;positive regulation of transcription;0.00700891772011563!GO:0030176;integral to endoplasmic reticulum membrane;0.00700891772011563!GO:0019798;procollagen-proline dioxygenase activity;0.00700891772011563!GO:0008033;tRNA processing;0.00720306799121884!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00723812223371171!GO:0000428;DNA-directed RNA polymerase complex;0.00723812223371171!GO:0000922;spindle pole;0.00743211178346031!GO:0065007;biological regulation;0.00748203839977251!GO:0045893;positive regulation of transcription, DNA-dependent;0.00748203839977251!GO:0043022;ribosome binding;0.00748572334964068!GO:0016251;general RNA polymerase II transcription factor activity;0.00756385409297666!GO:0008139;nuclear localization sequence binding;0.00759782048897703!GO:0008047;enzyme activator activity;0.00794976531329661!GO:0006405;RNA export from nucleus;0.00794976531329661!GO:0005669;transcription factor TFIID complex;0.008153446188264!GO:0031418;L-ascorbic acid binding;0.00819437901612669!GO:0046489;phosphoinositide biosynthetic process;0.00820095673467054!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0084627750679469!GO:0003702;RNA polymerase II transcription factor activity;0.0084627750679469!GO:0003711;transcription elongation regulator activity;0.00847598022726323!GO:0004003;ATP-dependent DNA helicase activity;0.00874264396055432!GO:0006350;transcription;0.00876962178224759!GO:0006268;DNA unwinding during replication;0.00886496758807674!GO:0016126;sterol biosynthetic process;0.00909667255676604!GO:0043284;biopolymer biosynthetic process;0.00914213374657805!GO:0005862;muscle thin filament tropomyosin;0.00941172579637425!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0095208101914828!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0095208101914828!GO:0000792;heterochromatin;0.0095208101914828!GO:0035258;steroid hormone receptor binding;0.00957640750187116!GO:0043624;cellular protein complex disassembly;0.00961626310772603!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00963690618635464!GO:0030027;lamellipodium;0.0101797188749717!GO:0006509;membrane protein ectodomain proteolysis;0.0104611498343863!GO:0033619;membrane protein proteolysis;0.0104611498343863!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0104942786247617!GO:0016272;prefoldin complex;0.0105731089558747!GO:0005832;chaperonin-containing T-complex;0.011316603952367!GO:0015992;proton transport;0.0113343707546751!GO:0000228;nuclear chromosome;0.0114774762434142!GO:0045045;secretory pathway;0.0114774762434142!GO:0019752;carboxylic acid metabolic process;0.0115772104228755!GO:0006818;hydrogen transport;0.0116182078442646!GO:0048487;beta-tubulin binding;0.0119318503895017!GO:0006007;glucose catabolic process;0.0120802833336499!GO:0006082;organic acid metabolic process;0.0125295512655525!GO:0016197;endosome transport;0.012575803592757!GO:0006892;post-Golgi vesicle-mediated transport;0.0129405968555394!GO:0043492;ATPase activity, coupled to movement of substances;0.0133329329243715!GO:0006520;amino acid metabolic process;0.0138203726983992!GO:0031625;ubiquitin protein ligase binding;0.0138278806301973!GO:0050681;androgen receptor binding;0.0138437408950194!GO:0006378;mRNA polyadenylation;0.0142991979517436!GO:0022408;negative regulation of cell-cell adhesion;0.0144443893289629!GO:0000287;magnesium ion binding;0.014483183471267!GO:0051287;NAD binding;0.0145940895436429!GO:0006740;NADPH regeneration;0.0145940895436429!GO:0006098;pentose-phosphate shunt;0.0145940895436429!GO:0001726;ruffle;0.0147737755698838!GO:0046483;heterocycle metabolic process;0.0155303011582925!GO:0000096;sulfur amino acid metabolic process;0.01560478691658!GO:0032984;macromolecular complex disassembly;0.01560478691658!GO:0031123;RNA 3'-end processing;0.0156101120985967!GO:0022890;inorganic cation transmembrane transporter activity;0.015992644943649!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0160154552480953!GO:0007021;tubulin folding;0.0160154552480953!GO:0003746;translation elongation factor activity;0.0160903345475259!GO:0051101;regulation of DNA binding;0.0163218641657988!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.016909529916376!GO:0030496;midbody;0.0174190298510357!GO:0045936;negative regulation of phosphate metabolic process;0.0174523481636139!GO:0016584;nucleosome positioning;0.01769823348837!GO:0030659;cytoplasmic vesicle membrane;0.0188032368370717!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0188730004590617!GO:0009303;rRNA transcription;0.0188730004590617!GO:0031529;ruffle organization and biogenesis;0.019297911572804!GO:0006289;nucleotide-excision repair;0.0193908201094378!GO:0004518;nuclease activity;0.0194064812194986!GO:0006220;pyrimidine nucleotide metabolic process;0.0194875196213248!GO:0006611;protein export from nucleus;0.0196605471599541!GO:0001952;regulation of cell-matrix adhesion;0.0213585788316617!GO:0032200;telomere organization and biogenesis;0.0219408788794408!GO:0000723;telomere maintenance;0.0219408788794408!GO:0045792;negative regulation of cell size;0.0219786441779918!GO:0030041;actin filament polymerization;0.0219786441779918!GO:0030125;clathrin vesicle coat;0.0219786441779918!GO:0030665;clathrin coated vesicle membrane;0.0219786441779918!GO:0006338;chromatin remodeling;0.0221392406656454!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0223014103190378!GO:0000819;sister chromatid segregation;0.0223014103190378!GO:0033673;negative regulation of kinase activity;0.0224609119171299!GO:0006469;negative regulation of protein kinase activity;0.0224609119171299!GO:0006950;response to stress;0.0226097246061266!GO:0007569;cell aging;0.0226097246061266!GO:0042770;DNA damage response, signal transduction;0.0229670362729351!GO:0016301;kinase activity;0.0229670362729351!GO:0006376;mRNA splice site selection;0.0230432320593148!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0230432320593148!GO:0022415;viral reproductive process;0.0232776999767531!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0234719325810797!GO:0009112;nucleobase metabolic process;0.0237567551526444!GO:0030833;regulation of actin filament polymerization;0.0242210881033235!GO:0030032;lamellipodium biogenesis;0.0243739260650905!GO:0048518;positive regulation of biological process;0.0247804174597859!GO:0043241;protein complex disassembly;0.0248955878269227!GO:0009116;nucleoside metabolic process;0.0251261148092831!GO:0007004;telomere maintenance via telomerase;0.025149515401394!GO:0005801;cis-Golgi network;0.025149515401394!GO:0007346;regulation of progression through mitotic cell cycle;0.0253716002144281!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.025814297646245!GO:0051098;regulation of binding;0.025928927984519!GO:0030119;AP-type membrane coat adaptor complex;0.025928927984519!GO:0006984;ER-nuclear signaling pathway;0.0260931219371472!GO:0048468;cell development;0.0263730375621739!GO:0006607;NLS-bearing substrate import into nucleus;0.0263862210242057!GO:0000070;mitotic sister chromatid segregation;0.0264771108877727!GO:0030308;negative regulation of cell growth;0.0265544520796538!GO:0000178;exosome (RNase complex);0.0268607706510192!GO:0000209;protein polyubiquitination;0.0269675875067373!GO:0003756;protein disulfide isomerase activity;0.0271905148314242!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0271905148314242!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0272803830726398!GO:0009225;nucleotide-sugar metabolic process;0.027620340096615!GO:0031570;DNA integrity checkpoint;0.0277140578958001!GO:0050790;regulation of catalytic activity;0.0277599506069065!GO:0008154;actin polymerization and/or depolymerization;0.0277599506069065!GO:0046467;membrane lipid biosynthetic process;0.0278677422536055!GO:0048146;positive regulation of fibroblast proliferation;0.0278742106650203!GO:0051348;negative regulation of transferase activity;0.0279683232651378!GO:0043433;negative regulation of transcription factor activity;0.0279727498021571!GO:0007264;small GTPase mediated signal transduction;0.0279727498021571!GO:0000781;chromosome, telomeric region;0.0280360073088328!GO:0006144;purine base metabolic process;0.0288214822259155!GO:0001527;microfibril;0.0288993134027388!GO:0048144;fibroblast proliferation;0.0289140166024761!GO:0048145;regulation of fibroblast proliferation;0.0289140166024761!GO:0010468;regulation of gene expression;0.0289387887414721!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0293947020041767!GO:0040029;regulation of gene expression, epigenetic;0.0296566179835121!GO:0042393;histone binding;0.0296891060632509!GO:0031901;early endosome membrane;0.0306434930775714!GO:0004177;aminopeptidase activity;0.031020100131724!GO:0030508;thiol-disulfide exchange intermediate activity;0.0314317966206234!GO:0008652;amino acid biosynthetic process;0.0317071256741229!GO:0001953;negative regulation of cell-matrix adhesion;0.0318761966537762!GO:0007030;Golgi organization and biogenesis;0.0320450299933392!GO:0005938;cell cortex;0.0321661558146012!GO:0006497;protein amino acid lipidation;0.0324659015310556!GO:0005856;cytoskeleton;0.0326392464236178!GO:0031371;ubiquitin conjugating enzyme complex;0.0340113947905543!GO:0042326;negative regulation of phosphorylation;0.0344950555321995!GO:0043596;nuclear replication fork;0.0345285663618267!GO:0009451;RNA modification;0.0352794741744175!GO:0043130;ubiquitin binding;0.0355872003059249!GO:0032182;small conjugating protein binding;0.0355872003059249!GO:0006695;cholesterol biosynthetic process;0.0356290221689893!GO:0006650;glycerophospholipid metabolic process;0.0361650153811716!GO:0005096;GTPase activator activity;0.0366578945797998!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0367567035075016!GO:0022411;cellular component disassembly;0.037030839170533!GO:0005784;translocon complex;0.0374822295738746!GO:0044433;cytoplasmic vesicle part;0.0376808547669546!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0377650592035998!GO:0033043;regulation of organelle organization and biogenesis;0.0377650592035998!GO:0008629;induction of apoptosis by intracellular signals;0.0377650592035998!GO:0042585;germinal vesicle;0.0382788026453185!GO:0008538;proteasome activator activity;0.0384164368328119!GO:0030145;manganese ion binding;0.0393529316358018!GO:0035267;NuA4 histone acetyltransferase complex;0.0396781775698364!GO:0030433;ER-associated protein catabolic process;0.0402269377398146!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0402269377398146!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0402269377398146!GO:0015002;heme-copper terminal oxidase activity;0.0402269377398146!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0402269377398146!GO:0004129;cytochrome-c oxidase activity;0.0402269377398146!GO:0030518;steroid hormone receptor signaling pathway;0.0404662591483429!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0406244521779497!GO:0030131;clathrin adaptor complex;0.0406244521779497!GO:0047485;protein N-terminus binding;0.040673875882096!GO:0031577;spindle checkpoint;0.0412253655145441!GO:0000086;G2/M transition of mitotic cell cycle;0.0416554599096391!GO:0017134;fibroblast growth factor binding;0.0429265601811187!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0431561951067378!GO:0000077;DNA damage checkpoint;0.0433487859222754!GO:0008632;apoptotic program;0.04405058706357!GO:0016407;acetyltransferase activity;0.04405058706357!GO:0007034;vacuolar transport;0.0442877759406808!GO:0019206;nucleoside kinase activity;0.0448205445802653!GO:0008283;cell proliferation;0.0454700925768886!GO:0000726;non-recombinational repair;0.0454700925768886!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0464569491181239!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0475668425033224!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0476612073205559!GO:0005680;anaphase-promoting complex;0.0478348547084351!GO:0003779;actin binding;0.0478348547084351!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0479283276190471!GO:0000152;nuclear ubiquitin ligase complex;0.0482364034485736!GO:0043189;H4/H2A histone acetyltransferase complex;0.0482364034485736!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0482364034485736!GO:0032153;cell division site;0.0483900728543439!GO:0032155;cell division site part;0.0483900728543439!GO:0008610;lipid biosynthetic process;0.0486046990212761!GO:0051338;regulation of transferase activity;0.0497009686418685!GO:0006541;glutamine metabolic process;0.0499908150417783 | |||
|sample_id=11354 | |sample_id=11354 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=bone | |sample_tissue=bone | ||
|top_motifs=HOX{A5,B5}:1.57357646352;ZNF384:1.40323111245;GATA4:1.37143765574;NR3C1:1.36433550473;NKX3-1:1.29420013109;CDC5L:1.19804204465;PAX8:1.18177910888;NKX2-2,8:1.13471725677;MYBL2:1.09164994446;SRF:1.05828047442;SOX17:1.05532223004;ZIC1..3:1.05117596099;PRDM1:1.03002603268;HAND1,2:1.01554200788;PDX1:1.01220806956;HMGA1,2:1.01088398992;EN1,2:1.00481016446;TAL1_TCF{3,4,12}:0.991424594775;HOX{A4,D4}:0.974945041709;HSF1,2:0.966062618041;KLF4:0.934477180158;ALX4:0.931476372306;MYB:0.922991183293;EVI1:0.873393098869;UFEwm:0.774943729353;GFI1:0.772298861997;TEAD1:0.764295753506;MAFB:0.763699133053;LHX3,4:0.762802254639;ATF6:0.762451790672;GFI1B:0.729425831108;SMAD1..7,9:0.721345257144;E2F1..5:0.706337778739;XBP1:0.687353147038;FOXL1:0.661648085778;GZF1:0.65734234457;POU3F1..4:0.649607364718;PRRX1,2:0.618559353334;MZF1:0.61143377197;TFDP1:0.609867807385;HMX1:0.60791986377;NFATC1..3:0.601699426944;NFE2L1:0.571518247869;SPZ1:0.57121747482;HES1:0.567167246066;MTE{core}:0.564850396329;GTF2A1,2:0.555577079472;POU5F1:0.513921947999;NKX2-3_NKX2-5:0.471818399923;GTF2I:0.44451335782;ZBTB6:0.440224296812;TBX4,5:0.431765164502;SOX2:0.424074395087;HBP1_HMGB_SSRP1_UBTF:0.41694735769;IKZF1:0.415471619529;AHR_ARNT_ARNT2:0.401370643811;GLI1..3:0.396803431744;CRX:0.392965967758;LEF1_TCF7_TCF7L1,2:0.350848075209;NR6A1:0.329106233284;NR1H4:0.302326070442;FOXD3:0.293529874189;ZNF143:0.28259279048;ZNF238:0.27268886642;RXR{A,B,G}:0.260749599487;HIF1A:0.246091098922;NFIX:0.244645753175;FOXA2:0.237121947732;ONECUT1,2:0.231053393252;NFE2L2:0.225892977384;BACH2:0.218820814472;NRF1:0.216890826649;ARID5B:0.212822533619;TFAP4:0.208845976896;NFY{A,B,C}:0.208467577921;PAX3,7:0.191476583341;MAZ:0.157043529896;T:0.148944403173;ZNF423:0.133810108548;TOPORS:0.129509161816;FOSL2:0.127889270638;JUN:0.110445182768;PAX4:0.107767529827;NKX3-2:0.090671028664;TLX1..3_NFIC{dimer}:0.0852392794943;TFCP2:0.0424754893953;GCM1,2:0.0301778693478;POU6F1:0.0275263775058;RREB1:0.0198106788779;ZBTB16:0.0170667007123;FOS_FOS{B,L1}_JUN{B,D}:0.00539175727784;RFX1:0.00306697348636;ESR1:0.00244251752122;AIRE:-0.000517763699132;MEF2{A,B,C,D}:-0.0259458324227;CDX1,2,4:-0.027143070149;BREu{core}:-0.0286445195762;RUNX1..3:-0.0376874626255;ADNP_IRX_SIX_ZHX:-0.041309480623;OCT4_SOX2{dimer}:-0.0435575803637;PAX5:-0.0488932644724;SOX{8,9,10}:-0.0522022704516;ZNF148:-0.0664842623683;CEBPA,B_DDIT3:-0.0723895188365;HNF1A:-0.0850354013143;ELK1,4_GABP{A,B1}:-0.112507604461;XCPE1{core}:-0.113086317859;HLF:-0.116905221211;EBF1:-0.122773184778;TEF:-0.134959630482;NFE2:-0.140422951998;POU1F1:-0.149765781924;HOXA9_MEIS1:-0.152538590545;NHLH1,2:-0.154278659311;NKX6-1,2:-0.154462881116;TGIF1:-0.156771949684;TBP:-0.158555810633;DBP:-0.16755871067;FOXM1:-0.167755736511;HIC1:-0.176705105726;TP53:-0.184498233884;PATZ1:-0.184805179491;VSX1,2:-0.200183113103;ZFP161:-0.207566993877;FOXP3:-0.211643662068;NR5A1,2:-0.246947539449;POU2F1..3:-0.249076472335;PPARG:-0.250556559557;MED-1{core}:-0.252645255048;IKZF2:-0.256850567904;YY1:-0.265310194031;MYFfamily:-0.267176624744;STAT2,4,6:-0.277438291482;NFIL3:-0.282980762737;REST:-0.285358258625;GATA6:-0.301860669177;TFAP2{A,C}:-0.311634426553;DMAP1_NCOR{1,2}_SMARC:-0.312555077539;EP300:-0.325544212616;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.332750251601;FOX{I1,J2}:-0.33306970884;PBX1:-0.340544082993;PAX2:-0.345472043127;NFKB1_REL_RELA:-0.345603237097;BPTF:-0.361586739441;CUX2:-0.375620876034;NANOG{mouse}:-0.376233602373;bHLH_family:-0.37926773379;STAT1,3:-0.388538095586;TFAP2B:-0.390326320845;ELF1,2,4:-0.403672989599;HNF4A_NR2F1,2:-0.404678364551;EGR1..3:-0.409077743268;LMO2:-0.409652055874;STAT5{A,B}:-0.413162817005;MTF1:-0.417305307615;NANOG:-0.429679413899;FOXN1:-0.443809743653;SNAI1..3:-0.467366443855;FOXO1,3,4:-0.495372671769;SPI1:-0.504400598731;ETS1,2:-0.526778120738;FOXQ1:-0.548121348172;IRF1,2:-0.548834179858;SPIB:-0.559414895285;FOX{F1,F2,J1}:-0.562827355688;AR:-0.573451417501;CREB1:-0.577606551071;RFX2..5_RFXANK_RFXAP:-0.581796717948;ATF5_CREB3:-0.605166113185;PAX6:-0.646452833602;RXRA_VDR{dimer}:-0.654304321239;ESRRA:-0.654791159117;FOX{D1,D2}:-0.665365481814;ATF4:-0.675084773084;FOXP1:-0.679254430294;SOX5:-0.6794423873;PAX1,9:-0.682449111905;ZEB1:-0.709251272934;IRF7:-0.728727209503;PITX1..3:-0.730638602868;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.807323246513;MYOD1:-0.842090079295;NKX2-1,4:-0.844103112199;HOX{A6,A7,B6,B7}:-0.84672801216;SREBF1,2:-0.88626022506;RBPJ:-0.886739785481;SP1:-0.955849768793;ATF2:-1.04570434111;RORA:-1.0934932745;ALX1:-1.19486245669;TLX2:-2.06264439268 | |top_motifs=HOX{A5,B5}:1.57357646352;ZNF384:1.40323111245;GATA4:1.37143765574;NR3C1:1.36433550473;NKX3-1:1.29420013109;CDC5L:1.19804204465;PAX8:1.18177910888;NKX2-2,8:1.13471725677;MYBL2:1.09164994446;SRF:1.05828047442;SOX17:1.05532223004;ZIC1..3:1.05117596099;PRDM1:1.03002603268;HAND1,2:1.01554200788;PDX1:1.01220806956;HMGA1,2:1.01088398992;EN1,2:1.00481016446;TAL1_TCF{3,4,12}:0.991424594775;HOX{A4,D4}:0.974945041709;HSF1,2:0.966062618041;KLF4:0.934477180158;ALX4:0.931476372306;MYB:0.922991183293;EVI1:0.873393098869;UFEwm:0.774943729353;GFI1:0.772298861997;TEAD1:0.764295753506;MAFB:0.763699133053;LHX3,4:0.762802254639;ATF6:0.762451790672;GFI1B:0.729425831108;SMAD1..7,9:0.721345257144;E2F1..5:0.706337778739;XBP1:0.687353147038;FOXL1:0.661648085778;GZF1:0.65734234457;POU3F1..4:0.649607364718;PRRX1,2:0.618559353334;MZF1:0.61143377197;TFDP1:0.609867807385;HMX1:0.60791986377;NFATC1..3:0.601699426944;NFE2L1:0.571518247869;SPZ1:0.57121747482;HES1:0.567167246066;MTE{core}:0.564850396329;GTF2A1,2:0.555577079472;POU5F1:0.513921947999;NKX2-3_NKX2-5:0.471818399923;GTF2I:0.44451335782;ZBTB6:0.440224296812;TBX4,5:0.431765164502;SOX2:0.424074395087;HBP1_HMGB_SSRP1_UBTF:0.41694735769;IKZF1:0.415471619529;AHR_ARNT_ARNT2:0.401370643811;GLI1..3:0.396803431744;CRX:0.392965967758;LEF1_TCF7_TCF7L1,2:0.350848075209;NR6A1:0.329106233284;NR1H4:0.302326070442;FOXD3:0.293529874189;ZNF143:0.28259279048;ZNF238:0.27268886642;RXR{A,B,G}:0.260749599487;HIF1A:0.246091098922;NFIX:0.244645753175;FOXA2:0.237121947732;ONECUT1,2:0.231053393252;NFE2L2:0.225892977384;BACH2:0.218820814472;NRF1:0.216890826649;ARID5B:0.212822533619;TFAP4:0.208845976896;NFY{A,B,C}:0.208467577921;PAX3,7:0.191476583341;MAZ:0.157043529896;T:0.148944403173;ZNF423:0.133810108548;TOPORS:0.129509161816;FOSL2:0.127889270638;JUN:0.110445182768;PAX4:0.107767529827;NKX3-2:0.090671028664;TLX1..3_NFIC{dimer}:0.0852392794943;TFCP2:0.0424754893953;GCM1,2:0.0301778693478;POU6F1:0.0275263775058;RREB1:0.0198106788779;ZBTB16:0.0170667007123;FOS_FOS{B,L1}_JUN{B,D}:0.00539175727784;RFX1:0.00306697348636;ESR1:0.00244251752122;AIRE:-0.000517763699132;MEF2{A,B,C,D}:-0.0259458324227;CDX1,2,4:-0.027143070149;BREu{core}:-0.0286445195762;RUNX1..3:-0.0376874626255;ADNP_IRX_SIX_ZHX:-0.041309480623;OCT4_SOX2{dimer}:-0.0435575803637;PAX5:-0.0488932644724;SOX{8,9,10}:-0.0522022704516;ZNF148:-0.0664842623683;CEBPA,B_DDIT3:-0.0723895188365;HNF1A:-0.0850354013143;ELK1,4_GABP{A,B1}:-0.112507604461;XCPE1{core}:-0.113086317859;HLF:-0.116905221211;EBF1:-0.122773184778;TEF:-0.134959630482;NFE2:-0.140422951998;POU1F1:-0.149765781924;HOXA9_MEIS1:-0.152538590545;NHLH1,2:-0.154278659311;NKX6-1,2:-0.154462881116;TGIF1:-0.156771949684;TBP:-0.158555810633;DBP:-0.16755871067;FOXM1:-0.167755736511;HIC1:-0.176705105726;TP53:-0.184498233884;PATZ1:-0.184805179491;VSX1,2:-0.200183113103;ZFP161:-0.207566993877;FOXP3:-0.211643662068;NR5A1,2:-0.246947539449;POU2F1..3:-0.249076472335;PPARG:-0.250556559557;MED-1{core}:-0.252645255048;IKZF2:-0.256850567904;YY1:-0.265310194031;MYFfamily:-0.267176624744;STAT2,4,6:-0.277438291482;NFIL3:-0.282980762737;REST:-0.285358258625;GATA6:-0.301860669177;TFAP2{A,C}:-0.311634426553;DMAP1_NCOR{1,2}_SMARC:-0.312555077539;EP300:-0.325544212616;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.332750251601;FOX{I1,J2}:-0.33306970884;PBX1:-0.340544082993;PAX2:-0.345472043127;NFKB1_REL_RELA:-0.345603237097;BPTF:-0.361586739441;CUX2:-0.375620876034;NANOG{mouse}:-0.376233602373;bHLH_family:-0.37926773379;STAT1,3:-0.388538095586;TFAP2B:-0.390326320845;ELF1,2,4:-0.403672989599;HNF4A_NR2F1,2:-0.404678364551;EGR1..3:-0.409077743268;LMO2:-0.409652055874;STAT5{A,B}:-0.413162817005;MTF1:-0.417305307615;NANOG:-0.429679413899;FOXN1:-0.443809743653;SNAI1..3:-0.467366443855;FOXO1,3,4:-0.495372671769;SPI1:-0.504400598731;ETS1,2:-0.526778120738;FOXQ1:-0.548121348172;IRF1,2:-0.548834179858;SPIB:-0.559414895285;FOX{F1,F2,J1}:-0.562827355688;AR:-0.573451417501;CREB1:-0.577606551071;RFX2..5_RFXANK_RFXAP:-0.581796717948;ATF5_CREB3:-0.605166113185;PAX6:-0.646452833602;RXRA_VDR{dimer}:-0.654304321239;ESRRA:-0.654791159117;FOX{D1,D2}:-0.665365481814;ATF4:-0.675084773084;FOXP1:-0.679254430294;SOX5:-0.6794423873;PAX1,9:-0.682449111905;ZEB1:-0.709251272934;IRF7:-0.728727209503;PITX1..3:-0.730638602868;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.807323246513;MYOD1:-0.842090079295;NKX2-1,4:-0.844103112199;HOX{A6,A7,B6,B7}:-0.84672801216;SREBF1,2:-0.88626022506;RBPJ:-0.886739785481;SP1:-0.955849768793;ATF2:-1.04570434111;RORA:-1.0934932745;ALX1:-1.19486245669;TLX2:-2.06264439268 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11354-117H4;search_select_hide=table117:FF:11354-117H4 | |||
}} | }} | ||
Latest revision as of 17:54, 4 June 2020
| Name: | Osteoblast, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11385 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11385
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11385
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.456 |
| 10 | 10 | 0.528 |
| 100 | 100 | 0.55 |
| 101 | 101 | 0.778 |
| 102 | 102 | 0.245 |
| 103 | 103 | 0.156 |
| 104 | 104 | 0.89 |
| 105 | 105 | 0.397 |
| 106 | 106 | 0.399 |
| 107 | 107 | 0.106 |
| 108 | 108 | 0.981 |
| 109 | 109 | 0.9 |
| 11 | 11 | 0.0723 |
| 110 | 110 | 0.515 |
| 111 | 111 | 0.557 |
| 112 | 112 | 0.592 |
| 113 | 113 | 0.0346 |
| 114 | 114 | 0.359 |
| 115 | 115 | 0.376 |
| 116 | 116 | 0.272 |
| 117 | 117 | 0.416 |
| 118 | 118 | 0.272 |
| 119 | 119 | 0.685 |
| 12 | 12 | 0.408 |
| 120 | 120 | 0.514 |
| 121 | 121 | 0.823 |
| 122 | 122 | 0.141 |
| 123 | 123 | 0.0057 |
| 124 | 124 | 0.907 |
| 125 | 125 | 0.239 |
| 126 | 126 | 0.286 |
| 127 | 127 | 0.792 |
| 128 | 128 | 0.741 |
| 129 | 129 | 0.964 |
| 13 | 13 | 0.404 |
| 130 | 130 | 0.342 |
| 131 | 131 | 0.315 |
| 132 | 132 | 0.868 |
| 133 | 133 | 0.234 |
| 134 | 134 | 0.0322 |
| 135 | 135 | 0.954 |
| 136 | 136 | 0.0927 |
| 137 | 137 | 0.583 |
| 138 | 138 | 0.137 |
| 139 | 139 | 0.562 |
| 14 | 14 | 0.3 |
| 140 | 140 | 0.92 |
| 141 | 141 | 0.545 |
| 142 | 142 | 0.709 |
| 143 | 143 | 0.126 |
| 144 | 144 | 0.715 |
| 145 | 145 | 0.928 |
| 146 | 146 | 0.477 |
| 147 | 147 | 0.0749 |
| 148 | 148 | 0.266 |
| 149 | 149 | 0.276 |
| 15 | 15 | 0.85 |
| 150 | 150 | 0.566 |
| 151 | 151 | 0.368 |
| 152 | 152 | 0.447 |
| 153 | 153 | 0.85 |
| 154 | 154 | 0.52 |
| 155 | 155 | 7.50796e-4 |
| 156 | 156 | 0.715 |
| 157 | 157 | 0.0142 |
| 158 | 158 | 0.0267 |
| 159 | 159 | 0.14 |
| 16 | 16 | 0.0596 |
| 160 | 160 | 0.322 |
| 161 | 161 | 0.111 |
| 162 | 162 | 0.0465 |
| 163 | 163 | 0.521 |
| 164 | 164 | 0.485 |
| 165 | 165 | 0.474 |
| 166 | 166 | 0.0106 |
| 167 | 167 | 0.899 |
| 168 | 168 | 0.702 |
| 169 | 169 | 0.627 |
| 17 | 17 | 0.816 |
| 18 | 18 | 0.161 |
| 19 | 19 | 0.044 |
| 2 | 2 | 0.56 |
| 20 | 20 | 0.122 |
| 21 | 21 | 0.254 |
| 22 | 22 | 0.655 |
| 23 | 23 | 0.122 |
| 24 | 24 | 0.678 |
| 25 | 25 | 0.738 |
| 26 | 26 | 0.875 |
| 27 | 27 | 0.853 |
| 28 | 28 | 0.217 |
| 29 | 29 | 0.714 |
| 3 | 3 | 0.337 |
| 30 | 30 | 0.518 |
| 31 | 31 | 0.8 |
| 32 | 32 | 3.48657e-6 |
| 33 | 33 | 0.934 |
| 34 | 34 | 0.773 |
| 35 | 35 | 0.601 |
| 36 | 36 | 0.303 |
| 37 | 37 | 0.49 |
| 38 | 38 | 0.509 |
| 39 | 39 | 0.273 |
| 4 | 4 | 0.235 |
| 40 | 40 | 0.0538 |
| 41 | 41 | 0.878 |
| 42 | 42 | 0.528 |
| 43 | 43 | 0.945 |
| 44 | 44 | 0.299 |
| 45 | 45 | 0.363 |
| 46 | 46 | 0.137 |
| 47 | 47 | 0.228 |
| 48 | 48 | 0.303 |
| 49 | 49 | 0.757 |
| 5 | 5 | 0.51 |
| 50 | 50 | 0.936 |
| 51 | 51 | 0.79 |
| 52 | 52 | 0.563 |
| 53 | 53 | 0.224 |
| 54 | 54 | 0.446 |
| 55 | 55 | 0.406 |
| 56 | 56 | 0.87 |
| 57 | 57 | 0.334 |
| 58 | 58 | 0.873 |
| 59 | 59 | 0.229 |
| 6 | 6 | 0.549 |
| 60 | 60 | 0.701 |
| 61 | 61 | 0.728 |
| 62 | 62 | 0.312 |
| 63 | 63 | 0.513 |
| 64 | 64 | 0.887 |
| 65 | 65 | 0.808 |
| 66 | 66 | 0.14 |
| 67 | 67 | 0.983 |
| 68 | 68 | 0.424 |
| 69 | 69 | 0.498 |
| 7 | 7 | 0.64 |
| 70 | 70 | 0.232 |
| 71 | 71 | 0.294 |
| 72 | 72 | 0.432 |
| 73 | 73 | 0.618 |
| 74 | 74 | 0.158 |
| 75 | 75 | 0.72 |
| 76 | 76 | 0.536 |
| 77 | 77 | 0.241 |
| 78 | 78 | 0.434 |
| 79 | 79 | 0.107 |
| 8 | 8 | 0.257 |
| 80 | 80 | 0.808 |
| 81 | 81 | 0.398 |
| 82 | 82 | 0.809 |
| 83 | 83 | 0.17 |
| 84 | 84 | 0.338 |
| 85 | 85 | 0.532 |
| 86 | 86 | 0.994 |
| 87 | 87 | 0.998 |
| 88 | 88 | 0.763 |
| 89 | 89 | 0.0464 |
| 9 | 9 | 0.529 |
| 90 | 90 | 0.044 |
| 91 | 91 | 0.314 |
| 92 | 92 | 0.487 |
| 93 | 93 | 0.168 |
| 94 | 94 | 0.425 |
| 95 | 95 | 0.161 |
| 96 | 96 | 0.583 |
| 97 | 97 | 0.696 |
| 98 | 98 | 0.287 |
| 99 | 99 | 0.0434 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11385
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000127 human osteoblast-Sciencell sample
FF:0000128 human osteoblast-Cell applications sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000055 (non-terminally differentiated cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000062 (osteoblast)
UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000127 (human osteoblast-Sciencell sample)
0000128 (human osteoblast-Cell applications sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000335 (mesenchyme condensation cell)
