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{{f5samples
{{f5samples
|id=FF:11290-117A3
|DRA_sample_Accession=CAGE@SAMD00005587
|name=Smooth Muscle Cells - Umbilical Artery, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005587
|sample_id=11290
|accession_numbers=CAGE;DRX008507;DRR009379;DRZ000804;DRZ002189;DRZ012154;DRZ013539
|rna_tube_id=117A3
|accession_numbers_RNASeq=sRNA-Seq;DRX037063;DRR041429;DRZ007071
|rna_box=117
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001637,UBERON:0000483,UBERON:0000479,UBERON:0000055,UBERON:0004111,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0003914,UBERON:0000025,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0010260,UBERON:0003509,UBERON:0007500,UBERON:0001981,UBERON:0002049,UBERON:0010317,UBERON:0007798,UBERON:0001310,UBERON:0004535,UBERON:0004572,UBERON:0004537,UBERON:0001009
|rna_position=A3
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002371,CL:0000393,CL:0000183,CL:0000187,CL:0000192,CL:0000211,CL:0000255,CL:0000359,CL:0002594
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Cell Applications
|rna_lot_number=1222
|rna_catalog_number=CA252-R10n
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=infant
|sample_tissue=umbilical artery
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=neonatal
|sample_ethnicity=U
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=smooth muscle cell
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs11091,LSID724,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10005,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000056,CL:0000144,CL:0000183,CL:0000187,CL:0000192,CL:0000211,CL:0000220,CL:0000222,CL:0000255,CL:0000355,CL:0000359,CL:0000393,CL:0000514,CL:0000548,CL:0000680,CL:0000723,CL:0002321,CL:0002371,CL:0002594
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000055,UBERON:0000061,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001009,UBERON:0001015,UBERON:0001062,UBERON:0001134,UBERON:0001310,UBERON:0001637,UBERON:0001981,UBERON:0002036,UBERON:0002049,UBERON:0002050,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003081,UBERON:0003082,UBERON:0003104,UBERON:0003509,UBERON:0003914,UBERON:0004111,UBERON:0004120,UBERON:0004290,UBERON:0004535,UBERON:0004537,UBERON:0004572,UBERON:0004872,UBERON:0005291,UBERON:0005423,UBERON:0006965,UBERON:0007500,UBERON:0007798,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000167
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr8:55370487..55370503,+!p1@SOX17!1.97!92.32!SOX17;;chr11:34642612..34642646,+!p1@EHF!1.62!40.58!EHF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.43!25.97!ZBED1;;chr11:46299199..46299233,+!p1@CREB3L1!1.42!125.20!CREB3L1;;chr16:86600426..86600441,+!p1@FOXC2!1.29!45.45!FOXC2;;chr11:46299539..46299620,+!p2@CREB3L1!1.16!22.93!CREB3L1;;chr4:81118647..81118666,+!p1@PRDM8!1.16!17.65!PRDM8;;chr12:54380404..54380433,+!p3@HOXC10!1.11!11.97!HOXC10;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.11!11.97!HOXC5;;chr6:34204921..34204939,+!p3@HMGA1!1.08!332.37!HMGA1;;chr7:1577899..1577943,+!p3@MAFK!1.08!11.16!MAFK;;chr12:54378923..54378966,+!p1@HOXC10!1.08!11.16!HOXC10;;chr18:19749541..19749557,+!p1@GATA6!1.05!32.47!GATA6;;chr1:151032860..151032918,+!p1@MLLT11!1.04!118.50!MLLT11;;chr12:66218255..66218304,+!p3@HMGA2!1.04!27.39!HMGA2;;chr12:66218598..66218645,+!p2@HMGA2!1.01!43.22!HMGA2;;chr7:27224842..27224872,-!p1@HOXA11!1.01!9.13!HOXA11;;chr4:174450089..174450153,-!p2@HAND2!1.01!9.13!HAND2;;chr17:46682321..46682362,-!p1@HOXB6!1.00!8.93!HOXB6;;chr18:19749386..19749404,+!p2@GATA6!0.99!12.58!GATA6;;chr4:111558135..111558198,-!p2@PITX2!0.99!8.73!PITX2;;chr12:66218836..66218888,+!p1@HMGA2!0.98!81.77!HMGA2;;chr9:35732647..35732678,+!p2@CREB3!0.98!48.50!CREB3;;chr7:27224795..27224840,-!p2@HOXA11!0.97!8.32!HOXA11;;chr5:72744594..72744609,-!p1@FOXD1!0.93!35.31!FOXD1;;chr9:35732514..35732530,+!p5@CREB3!0.93!10.96!CREB3;;chr4:111544219..111544240,-!p1@PITX2!0.92!7.30!PITX2;;chr12:54380036..54380091,+!p4@HOXC10!0.92!7.30!HOXC10;;chr5:72744445..72744466,-!p2@FOXD1!0.91!12.17!FOXD1;;chr1:151032922..151032951,+!p2@MLLT11!0.91!11.97!MLLT11;;chr12:54393880..54393962,+!p1@HOXC9!0.91!7.10!HOXC9;;chr12:54402745..54402788,+!p1@HOXC8!0.90!6.90!HOXC8;;chr11:61520075..61520136,+!p1@C11orf9!0.88!14.61!C11orf9;;chr12:26277817..26277863,-!p2@BHLHE41!0.87!8.93!BHLHE41;;chr1:8938709..8938720,-!p3@ENO1!0.86!317.15!ENO1;;chr17:46688334..46688385,-!p1@HOXB7!0.86!9.33!HOXB7;;chr6:134210243..134210257,+!p1@TCF21!0.86!6.29!TCF21;;chr1:37940170..37940190,+!p1@ZC3H12A!0.85!79.95!ZC3H12A;;chr16:86600870..86600921,+!p2@FOXC2!0.85!6.09!FOXC2;;chr19:42636586..42636607,-!p1@POU2F2!0.84!17.25!POU2F2;;chr11:65686732..65686756,+!p2@DRAP1!0.83!26.18!DRAP1;;chr11:65686802..65686818,+!p6@DRAP1!0.83!10.35!DRAP1;;chr11:65687362..65687436,+!p3@DRAP1!0.82!27.60!DRAP1;;chr17:46687959..46688007,-!p2@HOXB7!0.82!7.91!HOXB7;;chr11:34642656..34642667,+!p2@EHF!0.81!5.48!EHF;;chr12:54380112..54380126,+!p5@HOXC10!0.81!5.48!HOXC10;;chr7:27205106..27205134,-!p2@HOXA9!0.81!5.48!HOXA9;;chr7:150945865..150945896,-!p4@SMARCD3!0.80!5.28!SMARCD3;;chr4:174451370..174451387,-!p1@HAND2!0.80!5.28!HAND2;;chr10:94449703..94449718,+!p1@HHEX!0.77!20.49!HHEX;;chr7:35293685..35293718,-!p1@TBX20!0.77!4.87!TBX20;;chr17:59477233..59477263,+!p1@TBX2!0.76!16.03!TBX2;;chr12:124873357..124873401,-!p1@NCOR2!0.75!59.05!NCOR2;;chr5:134369905..134369972,-!p1@PITX1!0.75!7.51!PITX1;;chr20:30433396..30433414,-!p1@FOXS1!0.75!4.67!FOXS1;;chr19:45908292..45908374,-!p1@PPP1R13L!0.74!44.23!PPP1R13L;;chr12:27485762..27485776,+!p3@ARNTL2!0.74!13.19!ARNTL2;;chr12:66218904..66218913,+!p11@HMGA2!0.74!4.46!HMGA2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.72!341.50!TAX1BP3;;chr11:65667846..65667868,-!p1@FOSL1!0.72!127.02!FOSL1;;chr12:54366975..54367001,+!p1@HOXC11!0.72!4.26!HOXC11;;chr11:65667884..65667895,-!p2@FOSL1!0.71!17.65!FOSL1;;chr12:80085061..80085119,-!p6@PAWR!0.71!6.90!PAWR;;chr3:141087562..141087594,+!p12@ZBTB38!0.70!4.06!ZBTB38;;chr3:25469724..25469773,+!p1@RARB!0.69!5.88!RARB;;chr11:46299443..46299459,+!p4@CREB3L1!0.67!3.65!CREB3L1;;chr2:19558373..19558392,-!p1@OSR1!0.66!10.96!OSR1;;chr15:83953397..83953425,-!p1@BNC1!0.66!4.26!BNC1;;chr12:26277956..26277980,-!p1@BHLHE41!0.65!14.20!BHLHE41;;chr5:72744562..72744573,-!p3@FOXD1!0.65!4.46!FOXD1;;chr2:176969228..176969260,+!p1@HOXD11!0.65!3.45!HOXD11;;chr1:8938736..8938756,-!p1@ENO1!0.64!4409.04!ENO1;;chr20:42543441..42543497,+!p1@TOX2!0.64!17.65!TOX2;;chr6:34204973..34204990,+!p4@HMGA1!0.63!51.13!HMGA1;;chr20:42543506..42543549,+!p2@TOX2!0.63!8.93!TOX2;;chr1:151032782..151032801,+!p4@MLLT11!0.63!7.30!MLLT11;;chr2:5832508..5832524,+!p1@SOX11!0.63!3.25!SOX11;;chr12:54379029..54379057,+!p2@HOXC10!0.63!3.25!HOXC10;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.63!3.25!HOXC5;;chr9:35732592..35732640,+!p1@CREB3!0.62!50.12!CREB3;;chr21:30671690..30671762,+!p2@BACH1!0.62!12.38!BACH1;;chr2:239756739..239756755,+!p2@TWIST2!0.62!5.88!TWIST2;;chr12:66218378..66218401,+!p6@HMGA2!0.62!5.28!HMGA2;;chr2:71127699..71127744,+!p1@VAX2!0.61!7.10!VAX2;;chr12:66218183..66218209,+!p4@HMGA2!0.61!6.49!HMGA2;;chr2:192015701..192015743,-!p1@STAT4!0.61!4.46!STAT4;;chr12:66218923..66218934,+!p14@HMGA2!0.61!3.04!HMGA2;;chr1:8938766..8938774,-!p2@ENO1!0.60!249.78!ENO1;;chr3:141087393..141087426,+!p3@ZBTB38!0.60!14.00!ZBTB38;;chr20:50721803..50721857,-!p2@ZFP64!0.60!5.07!ZFP64;;chr6:34204672..34204692,+!p1@HMGA1!0.59!401.97!HMGA1;;chr15:96869114..968691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|fonse_cell_line_closure=
Line 66: Line 43:
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|fonse_treatment_closure=
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|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Smooth%2520Muscle%2520Cells%2520-%2520Umbilical%2520Artery%252c%2520donor1.CNhs11091.11290-117A3.hg38.nobarcode.ctss.bed.gz
|id=FF:11290-117A3
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|is_obsolete=
|library_id=CNhs11091
|library_id_phase_based=2:CNhs11091
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11290
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|name=Smooth Muscle Cells - Umbilical Artery, donor1
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|rna_box=117
|rna_catalog_number=CA252-R10n
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=1222
|rna_od260/230=
|rna_od260/280=
|rna_position=A3
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=117A3
|rna_weight_ug=10
|rnaseq_library_id=SRhi10005.GTCCGC
|sample_age=neonatal
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=smooth muscle cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Cell Applications
|sample_description=
|sample_dev_stage=infant
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=U
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.26364071077996e-215!GO:0005737;cytoplasm;2.66632768498201e-205!GO:0043226;organelle;3.74722840873731e-164!GO:0043229;intracellular organelle;7.26537157726128e-164!GO:0043231;intracellular membrane-bound organelle;7.94095949308282e-159!GO:0043227;membrane-bound organelle;1.56788114238326e-158!GO:0044444;cytoplasmic part;2.0313200378766e-147!GO:0044422;organelle part;5.77677554386867e-131!GO:0044446;intracellular organelle part;1.54905791875574e-129!GO:0032991;macromolecular complex;1.60093284062217e-91!GO:0005515;protein binding;2.01766394311293e-81!GO:0030529;ribonucleoprotein complex;7.7862881486575e-80!GO:0044238;primary metabolic process;2.81345785127583e-76!GO:0044237;cellular metabolic process;4.56170477030164e-75!GO:0005739;mitochondrion;5.1974042773551e-69!GO:0043170;macromolecule metabolic process;1.18340519074558e-67!GO:0043233;organelle lumen;5.91527861512215e-66!GO:0031974;membrane-enclosed lumen;5.91527861512215e-66!GO:0044428;nuclear part;1.24927965323841e-56!GO:0031090;organelle membrane;1.09174046302127e-55!GO:0019538;protein metabolic process;1.92218106488164e-55!GO:0003723;RNA binding;2.02973621416441e-55!GO:0005840;ribosome;4.45483123304457e-52!GO:0006412;translation;1.99433749338126e-50!GO:0044260;cellular macromolecule metabolic process;5.04100753020472e-50!GO:0044267;cellular protein metabolic process;2.46277710189924e-49!GO:0044429;mitochondrial part;4.9977501249809e-48!GO:0009058;biosynthetic process;1.09944598260263e-47!GO:0005634;nucleus;1.43432478538798e-46!GO:0016043;cellular component organization and biogenesis;2.90068509551132e-46!GO:0003735;structural constituent of ribosome;3.41297738815147e-46!GO:0043234;protein complex;4.06277046458089e-46!GO:0015031;protein transport;1.31470912885291e-44!GO:0044249;cellular biosynthetic process;3.63115179873789e-43!GO:0009059;macromolecule biosynthetic process;3.8395838475199e-43!GO:0033036;macromolecule localization;9.06867247025584e-43!GO:0005829;cytosol;4.32985747209637e-42!GO:0045184;establishment of protein localization;7.26121900454907e-41!GO:0008104;protein localization;1.67521938522349e-40!GO:0031967;organelle envelope;1.84802806272999e-40!GO:0031975;envelope;4.42869318674046e-40!GO:0033279;ribosomal subunit;4.867809970321e-39!GO:0006396;RNA processing;1.84559256219648e-38!GO:0031981;nuclear lumen;6.93643310023454e-36!GO:0046907;intracellular transport;3.37056389504072e-35!GO:0005740;mitochondrial envelope;1.59468104244278e-32!GO:0043283;biopolymer metabolic process;1.21054206062146e-31!GO:0031966;mitochondrial membrane;1.32562422194803e-30!GO:0016071;mRNA metabolic process;6.608603122367e-29!GO:0006886;intracellular protein transport;7.23429761300563e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.98902667423655e-29!GO:0019866;organelle inner membrane;1.35157156529767e-28!GO:0005743;mitochondrial inner membrane;1.57827166587541e-27!GO:0006996;organelle organization and biogenesis;2.40246910964853e-27!GO:0008380;RNA splicing;4.15359674337061e-27!GO:0043228;non-membrane-bound organelle;4.15359674337061e-27!GO:0043232;intracellular non-membrane-bound organelle;4.15359674337061e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.54696269883213e-26!GO:0010467;gene expression;2.10165942838608e-26!GO:0065003;macromolecular complex assembly;4.86543671600644e-26!GO:0006397;mRNA processing;1.31273910454517e-25!GO:0044445;cytosolic part;8.53751009342634e-24!GO:0005783;endoplasmic reticulum;1.04092791851121e-23!GO:0006119;oxidative phosphorylation;7.45745979738308e-23!GO:0012505;endomembrane system;1.10908247361504e-22!GO:0051649;establishment of cellular localization;1.19328594357183e-22!GO:0022607;cellular component assembly;1.51145293975499e-22!GO:0051641;cellular localization;1.71789141956328e-22!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.46301000892452e-22!GO:0044455;mitochondrial membrane part;8.28899837335968e-22!GO:0005654;nucleoplasm;2.42769240420744e-21!GO:0015934;large ribosomal subunit;4.49549108676996e-21!GO:0006457;protein folding;1.12470140934384e-20!GO:0005681;spliceosome;2.23871878630377e-20!GO:0000166;nucleotide binding;4.17235539496919e-20!GO:0005794;Golgi apparatus;2.41115740643508e-19!GO:0016462;pyrophosphatase activity;3.34961662163064e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.57237490230894e-19!GO:0044432;endoplasmic reticulum part;3.57237490230894e-19!GO:0031980;mitochondrial lumen;4.17215511822201e-19!GO:0005759;mitochondrial matrix;4.17215511822201e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;5.06067761972191e-19!GO:0015935;small ribosomal subunit;6.76671497012088e-19!GO:0017111;nucleoside-triphosphatase activity;2.05641356694306e-18!GO:0005746;mitochondrial respiratory chain;6.74315885240047e-18!GO:0044451;nucleoplasm part;1.35171082486475e-17!GO:0016874;ligase activity;2.74933272726297e-17!GO:0048770;pigment granule;3.2007313306133e-17!GO:0042470;melanosome;3.2007313306133e-17!GO:0000502;proteasome complex (sensu Eukaryota);1.159536238049e-16!GO:0051186;cofactor metabolic process;3.71421964799447e-16!GO:0006259;DNA metabolic process;6.44443428429728e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.17022662500767e-15!GO:0005730;nucleolus;2.20116523773291e-15!GO:0043412;biopolymer modification;2.39935715129868e-15!GO:0022618;protein-RNA complex assembly;2.43977926390792e-15!GO:0048193;Golgi vesicle transport;3.06197888215689e-15!GO:0006512;ubiquitin cycle;3.10022167246664e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.12984097705441e-15!GO:0050136;NADH dehydrogenase (quinone) activity;4.46543388154725e-15!GO:0003954;NADH dehydrogenase activity;4.46543388154725e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.46543388154725e-15!GO:0051082;unfolded protein binding;5.535948156751e-15!GO:0044265;cellular macromolecule catabolic process;5.76801591837042e-15!GO:0016192;vesicle-mediated transport;7.45799957158865e-15!GO:0017076;purine nucleotide binding;7.68286716679825e-15!GO:0032553;ribonucleotide binding;7.83482547078501e-15!GO:0032555;purine ribonucleotide binding;7.83482547078501e-15!GO:0008134;transcription factor binding;1.63900181973696e-14!GO:0009057;macromolecule catabolic process;1.64846575488799e-14!GO:0043285;biopolymer catabolic process;2.14706642601068e-14!GO:0006464;protein modification process;2.77384189459331e-14!GO:0006605;protein targeting;2.80999487960638e-14!GO:0044248;cellular catabolic process;4.59984816481382e-14!GO:0005761;mitochondrial ribosome;4.88771877259911e-14!GO:0000313;organellar ribosome;4.88771877259911e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.03925016821599e-14!GO:0008135;translation factor activity, nucleic acid binding;5.03925016821599e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.62114943023027e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.12492082586073e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.58672700543068e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.7843919997597e-13!GO:0042773;ATP synthesis coupled electron transport;1.7843919997597e-13!GO:0019941;modification-dependent protein catabolic process;1.92973682586736e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.92973682586736e-13!GO:0044257;cellular protein catabolic process;2.37630517139234e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.53699338759657e-13!GO:0045271;respiratory chain complex I;2.53699338759657e-13!GO:0005747;mitochondrial respiratory chain complex I;2.53699338759657e-13!GO:0006511;ubiquitin-dependent protein catabolic process;3.71412879927063e-13!GO:0005789;endoplasmic reticulum membrane;3.97246533198575e-13!GO:0030163;protein catabolic process;4.94168102675192e-13!GO:0006732;coenzyme metabolic process;4.97686375899573e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.17534304925286e-13!GO:0007049;cell cycle;1.00218680024475e-12!GO:0009055;electron carrier activity;1.14160114597954e-12!GO:0005524;ATP binding;9.15067245323651e-12!GO:0042254;ribosome biogenesis and assembly;9.50422975875849e-12!GO:0032559;adenyl ribonucleotide binding;1.77056161288935e-11!GO:0030554;adenyl nucleotide binding;2.32897425147163e-11!GO:0009259;ribonucleotide metabolic process;2.45415169449122e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;3.13374608647198e-11!GO:0000375;RNA splicing, via transesterification reactions;3.13374608647198e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.13374608647198e-11!GO:0005793;ER-Golgi intermediate compartment;3.2739414837088e-11!GO:0043687;post-translational protein modification;3.36103038524467e-11!GO:0012501;programmed cell death;6.08419285673063e-11!GO:0006163;purine nucleotide metabolic process;6.54120661375936e-11!GO:0009150;purine ribonucleotide metabolic process;1.01776909214395e-10!GO:0006915;apoptosis;1.16308522196984e-10!GO:0003743;translation initiation factor activity;1.26128433810054e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.81831905558583e-10!GO:0006164;purine nucleotide biosynthetic process;3.95704406414115e-10!GO:0009260;ribonucleotide biosynthetic process;5.04812864049909e-10!GO:0009152;purine ribonucleotide biosynthetic process;6.01151963408221e-10!GO:0044431;Golgi apparatus part;7.45253727028052e-10!GO:0022402;cell cycle process;9.15459793477876e-10!GO:0019787;small conjugating protein ligase activity;9.59089081690495e-10!GO:0006413;translational initiation;1.01718350654639e-09!GO:0008639;small protein conjugating enzyme activity;1.01752484460496e-09!GO:0004842;ubiquitin-protein ligase activity;1.73353272109252e-09!GO:0008219;cell death;1.85510077589244e-09!GO:0016265;death;1.85510077589244e-09!GO:0048523;negative regulation of cellular process;1.94313839874575e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.98502831484314e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.98502831484314e-09!GO:0030120;vesicle coat;2.04947401519051e-09!GO:0030662;coated vesicle membrane;2.04947401519051e-09!GO:0006913;nucleocytoplasmic transport;2.14393839996435e-09!GO:0005635;nuclear envelope;2.3693063712802e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.3693063712802e-09!GO:0003712;transcription cofactor activity;2.53531080361865e-09!GO:0009141;nucleoside triphosphate metabolic process;2.54431379321775e-09!GO:0003676;nucleic acid binding;2.63693516738083e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.63693516738083e-09!GO:0006399;tRNA metabolic process;2.89868041583521e-09!GO:0000278;mitotic cell cycle;3.79855686297489e-09!GO:0008565;protein transporter activity;4.13153215006573e-09!GO:0009056;catabolic process;4.26540945134908e-09!GO:0009060;aerobic respiration;4.66811329861461e-09!GO:0051169;nuclear transport;4.88046001188758e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.01976153251983e-09!GO:0009144;purine nucleoside triphosphate metabolic process;5.01976153251983e-09!GO:0006446;regulation of translational initiation;5.01976153251983e-09!GO:0042623;ATPase activity, coupled;7.82052397359863e-09!GO:0016881;acid-amino acid ligase activity;7.82052397359863e-09!GO:0009142;nucleoside triphosphate biosynthetic process;7.8905583731336e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.8905583731336e-09!GO:0031965;nuclear membrane;8.61905293653576e-09!GO:0048475;coated membrane;9.29549095789348e-09!GO:0030117;membrane coat;9.29549095789348e-09!GO:0016887;ATPase activity;9.32396825046568e-09!GO:0015986;ATP synthesis coupled proton transport;1.13680775720606e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.13680775720606e-08!GO:0044453;nuclear membrane part;1.13945568937522e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.20354590137098e-08!GO:0005788;endoplasmic reticulum lumen;1.52558608643467e-08!GO:0045333;cellular respiration;1.69520360190613e-08!GO:0003924;GTPase activity;1.91276672042182e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.09121058525577e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.09121058525577e-08!GO:0048519;negative regulation of biological process;2.43356579544401e-08!GO:0009117;nucleotide metabolic process;2.83610998055913e-08!GO:0016491;oxidoreductase activity;2.8394996362411e-08!GO:0005768;endosome;3.48855795074118e-08!GO:0019829;cation-transporting ATPase activity;3.48905699749429e-08!GO:0016604;nuclear body;3.54976153727172e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.69964316550304e-08!GO:0004812;aminoacyl-tRNA ligase activity;3.69964316550304e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.69964316550304e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.43144823518658e-08!GO:0016740;transferase activity;4.82110887749674e-08!GO:0051246;regulation of protein metabolic process;5.24950842134535e-08!GO:0051188;cofactor biosynthetic process;5.59885789635262e-08!GO:0046034;ATP metabolic process;6.30840195802889e-08!GO:0043038;amino acid activation;6.80434998433065e-08!GO:0006418;tRNA aminoacylation for protein translation;6.80434998433065e-08!GO:0043039;tRNA aminoacylation;6.80434998433065e-08!GO:0017038;protein import;7.45873649533415e-08!GO:0016070;RNA metabolic process;8.24971569286197e-08!GO:0006461;protein complex assembly;9.68827913421712e-08!GO:0006364;rRNA processing;1.04444500607073e-07!GO:0006325;establishment and/or maintenance of chromatin architecture;1.11296128822872e-07!GO:0051726;regulation of cell cycle;1.18248801584457e-07!GO:0000074;regulation of progression through cell cycle;1.4671797721157e-07!GO:0000139;Golgi membrane;1.66567252470005e-07!GO:0016072;rRNA metabolic process;1.8282034253901e-07!GO:0043069;negative regulation of programmed cell death;1.99149579899247e-07!GO:0065002;intracellular protein transport across a membrane;2.22111849934923e-07!GO:0006754;ATP biosynthetic process;2.30610155296887e-07!GO:0006753;nucleoside phosphate metabolic process;2.30610155296887e-07!GO:0005798;Golgi-associated vesicle;2.70129599115878e-07!GO:0043067;regulation of programmed cell death;3.11542370078194e-07!GO:0006099;tricarboxylic acid cycle;3.23116443694995e-07!GO:0046356;acetyl-CoA catabolic process;3.23116443694995e-07!GO:0006916;anti-apoptosis;3.2447005793675e-07!GO:0005643;nuclear pore;3.40317167326457e-07!GO:0006323;DNA packaging;3.55493798517463e-07!GO:0006793;phosphorus metabolic process;3.91987608320119e-07!GO:0006796;phosphate metabolic process;3.91987608320119e-07!GO:0042981;regulation of apoptosis;4.43995701936878e-07!GO:0006974;response to DNA damage stimulus;4.46184197418777e-07!GO:0043066;negative regulation of apoptosis;4.66081551285203e-07!GO:0030532;small nuclear ribonucleoprotein complex;5.10024165213675e-07!GO:0007005;mitochondrion organization and biogenesis;5.2286350728314e-07!GO:0016469;proton-transporting two-sector ATPase complex;7.56762383847311e-07!GO:0006084;acetyl-CoA metabolic process;7.69147970944031e-07!GO:0005839;proteasome core complex (sensu Eukaryota);9.01581606359879e-07!GO:0051276;chromosome organization and biogenesis;9.69898034670644e-07!GO:0008026;ATP-dependent helicase activity;1.05082746940923e-06!GO:0016787;hydrolase activity;1.11468900021323e-06!GO:0009109;coenzyme catabolic process;1.14446926462618e-06!GO:0044440;endosomal part;1.2765781130856e-06!GO:0010008;endosome membrane;1.2765781130856e-06!GO:0051187;cofactor catabolic process;1.4407064428364e-06!GO:0016607;nuclear speck;1.80647132472097e-06!GO:0016310;phosphorylation;2.1656454080127e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.43085414672904e-06!GO:0031252;leading edge;2.75613173014499e-06!GO:0005770;late endosome;2.99556985425142e-06!GO:0031988;membrane-bound vesicle;3.07220156896465e-06!GO:0046930;pore complex;3.16763539500168e-06!GO:0009108;coenzyme biosynthetic process;3.19556478064549e-06!GO:0065004;protein-DNA complex assembly;3.36237600602077e-06!GO:0006752;group transfer coenzyme metabolic process;3.4675875290459e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.59042262493742e-06!GO:0000087;M phase of mitotic cell cycle;3.6041894993995e-06!GO:0007067;mitosis;3.84901276831996e-06!GO:0006091;generation of precursor metabolites and energy;4.06204331128659e-06!GO:0016567;protein ubiquitination;4.43323674770876e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.09505950092636e-06!GO:0032446;protein modification by small protein conjugation;5.25384489299877e-06!GO:0016853;isomerase activity;5.52732889670108e-06!GO:0004386;helicase activity;5.62033556630864e-06!GO:0045259;proton-transporting ATP synthase complex;5.72460814766506e-06!GO:0005525;GTP binding;6.19154155430429e-06!GO:0004298;threonine endopeptidase activity;6.93908143823231e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.44037108323637e-06!GO:0045454;cell redox homeostasis;7.56405814557913e-06!GO:0006281;DNA repair;8.53125094729399e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.16177014579813e-05!GO:0015980;energy derivation by oxidation of organic compounds;1.19884143182853e-05!GO:0006260;DNA replication;1.22945770842658e-05!GO:0003714;transcription corepressor activity;1.26656847043215e-05!GO:0001558;regulation of cell growth;1.35848812767453e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.36297557899705e-05!GO:0008361;regulation of cell size;1.37089408924014e-05!GO:0005905;coated pit;1.45436670655974e-05!GO:0016049;cell growth;1.47610011033235e-05!GO:0006333;chromatin assembly or disassembly;1.50280072079524e-05!GO:0005773;vacuole;1.51926744996845e-05!GO:0005667;transcription factor complex;1.63652208004282e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.70297460611858e-05!GO:0044262;cellular carbohydrate metabolic process;1.77946517441398e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.91530168763013e-05!GO:0008092;cytoskeletal protein binding;2.13945934454492e-05!GO:0005762;mitochondrial large ribosomal subunit;2.1892379031062e-05!GO:0000315;organellar large ribosomal subunit;2.1892379031062e-05!GO:0008654;phospholipid biosynthetic process;2.27663960743913e-05!GO:0000151;ubiquitin ligase complex;2.4191075084675e-05!GO:0016779;nucleotidyltransferase activity;2.51872760415018e-05!GO:0000245;spliceosome assembly;2.52294886225881e-05!GO:0031982;vesicle;2.52842114586969e-05!GO:0022403;cell cycle phase;2.54347160368261e-05!GO:0051170;nuclear import;2.6291620713913e-05!GO:0051301;cell division;2.6421090309629e-05!GO:0015630;microtubule cytoskeleton;2.65667510982448e-05!GO:0031410;cytoplasmic vesicle;2.66066396128761e-05!GO:0006613;cotranslational protein targeting to membrane;2.87954858719587e-05!GO:0030867;rough endoplasmic reticulum membrane;2.97707924808765e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.77337128302832e-05!GO:0005694;chromosome;3.90906193751538e-05!GO:0050657;nucleic acid transport;3.95957265872634e-05!GO:0051236;establishment of RNA localization;3.95957265872634e-05!GO:0050658;RNA transport;3.95957265872634e-05!GO:0032561;guanyl ribonucleotide binding;4.00405831106928e-05!GO:0019001;guanyl nucleotide binding;4.00405831106928e-05!GO:0006403;RNA localization;4.06572515817065e-05!GO:0031968;organelle outer membrane;4.0836921195755e-05!GO:0051789;response to protein stimulus;4.14324698242079e-05!GO:0006986;response to unfolded protein;4.14324698242079e-05!GO:0006606;protein import into nucleus;4.65740210567446e-05!GO:0009719;response to endogenous stimulus;4.88980502416866e-05!GO:0006366;transcription from RNA polymerase II promoter;5.08397104969269e-05!GO:0033116;ER-Golgi intermediate compartment membrane;5.16129406524579e-05!GO:0019867;outer membrane;5.59298336957651e-05!GO:0005048;signal sequence binding;5.66056687772317e-05!GO:0030133;transport vesicle;6.16634986567166e-05!GO:0003724;RNA helicase activity;6.18443898249743e-05!GO:0050794;regulation of cellular process;6.28926818511338e-05!GO:0003697;single-stranded DNA binding;6.92654473266506e-05!GO:0016568;chromatin modification;7.29214215384606e-05!GO:0006334;nucleosome assembly;7.31534559265524e-05!GO:0044427;chromosomal part;7.4160988328927e-05!GO:0030176;integral to endoplasmic reticulum membrane;7.89456604069507e-05!GO:0003899;DNA-directed RNA polymerase activity;8.22749675320571e-05!GO:0030029;actin filament-based process;0.000100776259378419!GO:0043623;cellular protein complex assembly;0.00011348423311451!GO:0048522;positive regulation of cellular process;0.000114639036525359!GO:0045786;negative regulation of progression through cell cycle;0.000123112139348037!GO:0007010;cytoskeleton organization and biogenesis;0.000124662731193314!GO:0005741;mitochondrial outer membrane;0.000125309302105286!GO:0016859;cis-trans isomerase activity;0.000130275442385111!GO:0009165;nucleotide biosynthetic process;0.000139989983634978!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000141266080879261!GO:0000323;lytic vacuole;0.000141266080879261!GO:0005764;lysosome;0.000141266080879261!GO:0016564;transcription repressor activity;0.000141996620078394!GO:0031324;negative regulation of cellular metabolic process;0.000156392517661005!GO:0000785;chromatin;0.000156545419440997!GO:0031497;chromatin assembly;0.000161671909704797!GO:0005769;early endosome;0.000165858161858366!GO:0043566;structure-specific DNA binding;0.000169862770623291!GO:0003713;transcription coactivator activity;0.00017706028705261!GO:0016563;transcription activator activity;0.000214095834727037!GO:0005885;Arp2/3 protein complex;0.000248621489056771!GO:0030658;transport vesicle membrane;0.000261456886407987!GO:0000314;organellar small ribosomal subunit;0.000275469680190691!GO:0005763;mitochondrial small ribosomal subunit;0.000275469680190691!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000289764705108068!GO:0007243;protein kinase cascade;0.000305009278981788!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0003065770426615!GO:0043021;ribonucleoprotein binding;0.000310404968034849!GO:0008047;enzyme activator activity;0.000348958042670624!GO:0030663;COPI coated vesicle membrane;0.000364716696018512!GO:0030126;COPI vesicle coat;0.000364716696018512!GO:0046474;glycerophospholipid biosynthetic process;0.000367028138754051!GO:0006414;translational elongation;0.000391896528387439!GO:0008250;oligosaccharyl transferase complex;0.000432951866994656!GO:0006612;protein targeting to membrane;0.000437599328903727!GO:0030137;COPI-coated vesicle;0.000464023538873342!GO:0006891;intra-Golgi vesicle-mediated transport;0.00049518738625436!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000551152497772614!GO:0015399;primary active transmembrane transporter activity;0.000551152497772614!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000586465863294037!GO:0051028;mRNA transport;0.000600575648175442!GO:0040008;regulation of growth;0.000608076711716358!GO:0030660;Golgi-associated vesicle membrane;0.000641092810073999!GO:0016044;membrane organization and biogenesis;0.000662973097776291!GO:0004576;oligosaccharyl transferase activity;0.000707702912639009!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000717263646298178!GO:0008186;RNA-dependent ATPase activity;0.000724241164755127!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000742052427231632!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000753269988192656!GO:0043284;biopolymer biosynthetic process;0.000775955825494624!GO:0030118;clathrin coat;0.000838143113214481!GO:0009892;negative regulation of metabolic process;0.000857523408470644!GO:0051920;peroxiredoxin activity;0.000860557621174415!GO:0042802;identical protein binding;0.000875501739621346!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000894610747894135!GO:0006082;organic acid metabolic process;0.000935346833979351!GO:0030132;clathrin coat of coated pit;0.000951959602282846!GO:0043681;protein import into mitochondrion;0.000977401137688178!GO:0019752;carboxylic acid metabolic process;0.00104037568944692!GO:0051427;hormone receptor binding;0.00107675159706305!GO:0000279;M phase;0.001085231605327!GO:0030880;RNA polymerase complex;0.00109199357027706!GO:0019899;enzyme binding;0.0011302436746762!GO:0007006;mitochondrial membrane organization and biogenesis;0.0011302436746762!GO:0006839;mitochondrial transport;0.0011687257741612!GO:0046467;membrane lipid biosynthetic process;0.00117119974915909!GO:0065009;regulation of a molecular function;0.00123746872574509!GO:0051329;interphase of mitotic cell cycle;0.00130762097427254!GO:0007264;small GTPase mediated signal transduction;0.0013111790400273!GO:0031301;integral to organelle membrane;0.00135436923118548!GO:0031072;heat shock protein binding;0.0013711476746826!GO:0019843;rRNA binding;0.00137205569177577!GO:0018196;peptidyl-asparagine modification;0.00140825016268863!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00140825016268863!GO:0006626;protein targeting to mitochondrion;0.00144710148595291!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00146147332989766!GO:0030134;ER to Golgi transport vesicle;0.00153014585201629!GO:0048487;beta-tubulin binding;0.00163413160782263!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00167878611414936!GO:0046489;phosphoinositide biosynthetic process;0.00171541781699913!GO:0004004;ATP-dependent RNA helicase activity;0.00172381310602415!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00172381310602415!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00172381310602415!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00172381310602415!GO:0030659;cytoplasmic vesicle membrane;0.00181852338670178!GO:0015631;tubulin binding;0.00184074420142109!GO:0050789;regulation of biological process;0.00192067122001882!GO:0004177;aminopeptidase activity;0.00192286758181849!GO:0008632;apoptotic program;0.00192385440166225!GO:0051168;nuclear export;0.00197574658528239!GO:0035257;nuclear hormone receptor binding;0.00203348505442261!GO:0045792;negative regulation of cell size;0.0020578376886453!GO:0005813;centrosome;0.00206893371288231!GO:0015992;proton transport;0.00207233556994698!GO:0005791;rough endoplasmic reticulum;0.00210577762462447!GO:0045045;secretory pathway;0.00211170226019828!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00220484458923737!GO:0030308;negative regulation of cell growth;0.00223364220106759!GO:0006818;hydrogen transport;0.0024730870969123!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00250013067261041!GO:0000428;DNA-directed RNA polymerase complex;0.00250013067261041!GO:0048471;perinuclear region of cytoplasm;0.00252254587378039!GO:0005096;GTPase activator activity;0.00253148167639367!GO:0016197;endosome transport;0.00267850293408246!GO:0030127;COPII vesicle coat;0.00270134218830778!GO:0012507;ER to Golgi transport vesicle membrane;0.00270134218830778!GO:0046483;heterocycle metabolic process;0.00288313082388401!GO:0022890;inorganic cation transmembrane transporter activity;0.00314172404574765!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00324921830028021!GO:0043492;ATPase activity, coupled to movement of substances;0.0033750578625361!GO:0008610;lipid biosynthetic process;0.00345841734324185!GO:0030125;clathrin vesicle coat;0.00348927209194638!GO:0030665;clathrin coated vesicle membrane;0.00348927209194638!GO:0051325;interphase;0.0035168226580154!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00354483690877375!GO:0046519;sphingoid metabolic process;0.00362824358999747!GO:0048500;signal recognition particle;0.00367709512300782!GO:0006383;transcription from RNA polymerase III promoter;0.0036843681943179!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00383332399181615!GO:0000059;protein import into nucleus, docking;0.00388083702464545!GO:0005819;spindle;0.00389233902785021!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00406113758750538!GO:0006007;glucose catabolic process;0.00406284270115583!GO:0008139;nuclear localization sequence binding;0.00413568025611048!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00420180665808122!GO:0015002;heme-copper terminal oxidase activity;0.00420180665808122!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00420180665808122!GO:0004129;cytochrome-c oxidase activity;0.00420180665808122!GO:0044433;cytoplasmic vesicle part;0.00453642242861202!GO:0003779;actin binding;0.00454953429635633!GO:0008033;tRNA processing;0.00454953429635633!GO:0005815;microtubule organizing center;0.00460183588895554!GO:0003746;translation elongation factor activity;0.00478072790671486!GO:0044452;nucleolar part;0.00481463567332113!GO:0003711;transcription elongation regulator activity;0.00486330845879535!GO:0006520;amino acid metabolic process;0.00492166558932151!GO:0017166;vinculin binding;0.00503281549030961!GO:0031902;late endosome membrane;0.00504581336730396!GO:0030027;lamellipodium;0.00510314591788223!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00537149718895202!GO:0006807;nitrogen compound metabolic process;0.00550759936719499!GO:0006497;protein amino acid lipidation;0.00561801745888847!GO:0008243;plasminogen activator activity;0.00563383089451814!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00566728178607741!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00576672396527706!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00594902590105487!GO:0009967;positive regulation of signal transduction;0.00594902590105487!GO:0030119;AP-type membrane coat adaptor complex;0.00594902590105487!GO:0005874;microtubule;0.00597316113756289!GO:0006672;ceramide metabolic process;0.00617105759458547!GO:0006595;polyamine metabolic process;0.00619026432133095!GO:0007050;cell cycle arrest;0.00625944463199084!GO:0008180;signalosome;0.0064889612167536!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00669456127749946!GO:0051087;chaperone binding;0.00719410601802228!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00746862906266608!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00746862906266608!GO:0031543;peptidyl-proline dioxygenase activity;0.00749083410003912!GO:0048468;cell development;0.00764828147941382!GO:0003729;mRNA binding;0.00772788564179878!GO:0000049;tRNA binding;0.00784756920883783!GO:0051540;metal cluster binding;0.00812884985314653!GO:0051536;iron-sulfur cluster binding;0.00812884985314653!GO:0045941;positive regulation of transcription;0.00814080242680783!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00817167198586519!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00826551660926859!GO:0045047;protein targeting to ER;0.00826551660926859!GO:0005862;muscle thin filament tropomyosin;0.0086671123098935!GO:0030131;clathrin adaptor complex;0.00885637946801832!GO:0007040;lysosome organization and biogenesis;0.00951716549910951!GO:0016363;nuclear matrix;0.00962228502518845!GO:0005684;U2-dependent spliceosome;0.00974006374909253!GO:0016126;sterol biosynthetic process;0.00992043467568814!GO:0005869;dynactin complex;0.0099680987235663!GO:0006509;membrane protein ectodomain proteolysis;0.0100522434156037!GO:0033619;membrane protein proteolysis;0.0100522434156037!GO:0008312;7S RNA binding;0.0102764496574438!GO:0051252;regulation of RNA metabolic process;0.0102764496574438!GO:0045893;positive regulation of transcription, DNA-dependent;0.010282683921525!GO:0045936;negative regulation of phosphate metabolic process;0.0105544480220619!GO:0007033;vacuole organization and biogenesis;0.0105572673670536!GO:0016481;negative regulation of transcription;0.0105805968021756!GO:0051539;4 iron, 4 sulfur cluster binding;0.010648574562973!GO:0050662;coenzyme binding;0.010648574562973!GO:0005774;vacuolar membrane;0.010802882997758!GO:0030521;androgen receptor signaling pathway;0.010802882997758!GO:0012506;vesicle membrane;0.0108484938301611!GO:0006740;NADPH regeneration;0.0108484938301611!GO:0006098;pentose-phosphate shunt;0.0108484938301611!GO:0001726;ruffle;0.0112040443487502!GO:0004674;protein serine/threonine kinase activity;0.0112626886917305!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0113543941628201!GO:0051287;NAD binding;0.012633758783422!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0126439768922661!GO:0016301;kinase activity;0.0127882001826259!GO:0019798;procollagen-proline dioxygenase activity;0.0131373915894357!GO:0045926;negative regulation of growth;0.0131513493914654!GO:0048144;fibroblast proliferation;0.0131605563408242!GO:0048145;regulation of fibroblast proliferation;0.0131605563408242!GO:0048518;positive regulation of biological process;0.0132237132018251!GO:0005832;chaperonin-containing T-complex;0.0133697426219631!GO:0009308;amine metabolic process;0.0135782131785642!GO:0006118;electron transport;0.0136083558806058!GO:0019318;hexose metabolic process;0.0138402077663128!GO:0003684;damaged DNA binding;0.0141167745559354!GO:0033673;negative regulation of kinase activity;0.0143151811557101!GO:0006469;negative regulation of protein kinase activity;0.0143151811557101!GO:0005975;carbohydrate metabolic process;0.014347282700638!GO:0031418;L-ascorbic acid binding;0.0146532927171983!GO:0050811;GABA receptor binding;0.0146644294250598!GO:0007034;vacuolar transport;0.0147549166120695!GO:0000786;nucleosome;0.0149850994093606!GO:0005996;monosaccharide metabolic process;0.0150808967077779!GO:0006650;glycerophospholipid metabolic process;0.0151436005806776!GO:0006354;RNA elongation;0.0157402266236366!GO:0043022;ribosome binding;0.0169305174500848!GO:0050790;regulation of catalytic activity;0.0169952064704942!GO:0042158;lipoprotein biosynthetic process;0.0173700416105626!GO:0043488;regulation of mRNA stability;0.0173700416105626!GO:0043487;regulation of RNA stability;0.0173700416105626!GO:0005100;Rho GTPase activator activity;0.017573899191289!GO:0006417;regulation of translation;0.0177005193841639!GO:0051348;negative regulation of transferase activity;0.0180159192404722!GO:0031300;intrinsic to organelle membrane;0.0187100757254015!GO:0018193;peptidyl-amino acid modification;0.0188883188208153!GO:0035258;steroid hormone receptor binding;0.0193214266478346!GO:0006352;transcription initiation;0.0194407328832606!GO:0000209;protein polyubiquitination;0.0204030060692709!GO:0031529;ruffle organization and biogenesis;0.020540720838888!GO:0006289;nucleotide-excision repair;0.0208261950180971!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0209314189165892!GO:0016272;prefoldin complex;0.0213295843640156!GO:0031124;mRNA 3'-end processing;0.0215379869131901!GO:0006506;GPI anchor biosynthetic process;0.0216429419776286!GO:0032940;secretion by cell;0.0216639445242342!GO:0009112;nucleobase metabolic process;0.0218125631294873!GO:0007265;Ras protein signal transduction;0.0218152168678933!GO:0046426;negative regulation of JAK-STAT cascade;0.0220109899774346!GO:0000287;magnesium ion binding;0.0220143174759726!GO:0007021;tubulin folding;0.0220587885173063!GO:0008022;protein C-terminus binding;0.0227394141071731!GO:0006778;porphyrin metabolic process;0.0230238199020441!GO:0033013;tetrapyrrole metabolic process;0.0230238199020441!GO:0031901;early endosome membrane;0.0230335847985204!GO:0006096;glycolysis;0.0230965137196639!GO:0042326;negative regulation of phosphorylation;0.0231541182557556!GO:0003756;protein disulfide isomerase activity;0.0231541182557556!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0231541182557556!GO:0006979;response to oxidative stress;0.0236483618845993!GO:0044437;vacuolar part;0.0240911293266006!GO:0048146;positive regulation of fibroblast proliferation;0.0241523624127161!GO:0006695;cholesterol biosynthetic process;0.0244427054906055!GO:0006984;ER-nuclear signaling pathway;0.0245894313395784!GO:0006897;endocytosis;0.0247525101374991!GO:0010324;membrane invagination;0.0247525101374991!GO:0042168;heme metabolic process;0.0248541768401983!GO:0006378;mRNA polyadenylation;0.0250052339426366!GO:0008538;proteasome activator activity;0.0250930746872169!GO:0000030;mannosyltransferase activity;0.025155822488307!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0261289616407852!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0261378118861883!GO:0006739;NADP metabolic process;0.0265967198957955!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0268743815242316!GO:0007242;intracellular signaling cascade;0.0269973522828704!GO:0016408;C-acyltransferase activity;0.0273547329620539!GO:0000082;G1/S transition of mitotic cell cycle;0.0273574221781143!GO:0006611;protein export from nucleus;0.0284104600900107!GO:0046365;monosaccharide catabolic process;0.0289438380922892!GO:0009116;nucleoside metabolic process;0.0294059247042946!GO:0035035;histone acetyltransferase binding;0.0294910819120009!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0297646929824538!GO:0006892;post-Golgi vesicle-mediated transport;0.0304117010673144!GO:0008637;apoptotic mitochondrial changes;0.0305213581795672!GO:0005765;lysosomal membrane;0.030745490360364!GO:0006779;porphyrin biosynthetic process;0.0308752329731696!GO:0033014;tetrapyrrole biosynthetic process;0.0308752329731696!GO:0006783;heme biosynthetic process;0.0315204042560396!GO:0048037;cofactor binding;0.0315557384566116!GO:0051098;regulation of binding;0.0316309188846445!GO:0000339;RNA cap binding;0.0317961717470733!GO:0031970;organelle envelope lumen;0.031923594227857!GO:0005092;GDP-dissociation inhibitor activity;0.031923594227857!GO:0009889;regulation of biosynthetic process;0.031923594227857!GO:0006458;'de novo' protein folding;0.031923594227857!GO:0051084;'de novo' posttranslational protein folding;0.031923594227857!GO:0006405;RNA export from nucleus;0.0320730623521403!GO:0006401;RNA catabolic process;0.0323307878737804!GO:0006505;GPI anchor metabolic process;0.0323307878737804!GO:0031625;ubiquitin protein ligase binding;0.0324099626248384!GO:0030433;ER-associated protein catabolic process;0.0326463302102704!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0326463302102704!GO:0030032;lamellipodium biogenesis;0.0329483738243741!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0331718956246656!GO:0006376;mRNA splice site selection;0.0331718956246656!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0331718956246656!GO:0006635;fatty acid beta-oxidation;0.0344641198915825!GO:0005099;Ras GTPase activator activity;0.0349991296774401!GO:0006519;amino acid and derivative metabolic process;0.0350087171355903!GO:0004722;protein serine/threonine phosphatase activity;0.0351884737016399!GO:0007030;Golgi organization and biogenesis;0.0359908165895584!GO:0030041;actin filament polymerization;0.0370199974239595!GO:0007088;regulation of mitosis;0.03702103175469!GO:0022415;viral reproductive process;0.0379495515537709!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0379495515537709!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0379495515537709!GO:0005669;transcription factor TFIID complex;0.0379495515537709!GO:0030384;phosphoinositide metabolic process;0.0379790661984127!GO:0006402;mRNA catabolic process;0.0382049935938994!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0382301746963359!GO:0005758;mitochondrial intermembrane space;0.0385355819489149!GO:0009166;nucleotide catabolic process;0.0390544424632349!GO:0006643;membrane lipid metabolic process;0.0390544424632349!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0401105502657681!GO:0030140;trans-Golgi network transport vesicle;0.0403529477350739!GO:0032984;macromolecular complex disassembly;0.0410423839244306!GO:0030911;TPR domain binding;0.0412951525137063!GO:0019320;hexose catabolic process;0.0415387596822671!GO:0030145;manganese ion binding;0.0419977031394655!GO:0006261;DNA-dependent DNA replication;0.0420387623402466!GO:0032906;transforming growth factor-beta2 production;0.0424676845342857!GO:0032909;regulation of transforming growth factor-beta2 production;0.0424676845342857!GO:0031326;regulation of cellular biosynthetic process;0.0426859742564337!GO:0048660;regulation of smooth muscle cell proliferation;0.0428916644625915!GO:0050681;androgen receptor binding;0.0430127723129713!GO:0009303;rRNA transcription;0.0430478573519794!GO:0019206;nucleoside kinase activity;0.0430478573519794!GO:0045334;clathrin-coated endocytic vesicle;0.0432435208294246!GO:0035267;NuA4 histone acetyltransferase complex;0.0433320694036522!GO:0043189;H4/H2A histone acetyltransferase complex;0.0434212678779653!GO:0000096;sulfur amino acid metabolic process;0.0436289355107607!GO:0006518;peptide metabolic process;0.0439399029776111!GO:0046164;alcohol catabolic process;0.0440993044561402!GO:0016860;intramolecular oxidoreductase activity;0.0443488358696719!GO:0001666;response to hypoxia;0.0452269430037163!GO:0004680;casein kinase activity;0.0458338530282656!GO:0030518;steroid hormone receptor signaling pathway;0.0468605269189117!GO:0030508;thiol-disulfide exchange intermediate activity;0.0469222597868996!GO:0031371;ubiquitin conjugating enzyme complex;0.0474353355646703!GO:0006220;pyrimidine nucleotide metabolic process;0.0489165957927842!GO:0030149;sphingolipid catabolic process;0.0491571394464975!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0494815949502689!GO:0010257;NADH dehydrogenase complex assembly;0.0494815949502689!GO:0033108;mitochondrial respiratory chain complex assembly;0.0494815949502689!GO:0008652;amino acid biosynthetic process;0.0497878651207023!GO:0000075;cell cycle checkpoint;0.0499094075874386
|sample_id=11290
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=umbilical artery
|top_motifs=SRF:1.99009551903;GTF2A1,2:1.54357716842;HOX{A5,B5}:1.51221815614;PPARG:1.43476968909;CRX:1.26580281245;TP53:1.20368089187;HIF1A:1.18116578484;PAX8:1.11218436655;ADNP_IRX_SIX_ZHX:1.0495266116;EN1,2:1.00732174067;ZNF148:0.978859440105;IKZF1:0.964699490127;SOX17:0.927376337053;NFE2L1:0.921176728581;GLI1..3:0.896061711538;ONECUT1,2:0.875836028304;HAND1,2:0.866945626428;HES1:0.817030442645;TFAP4:0.796205397753;STAT5{A,B}:0.779914798671;ZBTB6:0.750714666733;TEAD1:0.732975614247;NFATC1..3:0.729782176389;POU3F1..4:0.700832309361;TBX4,5:0.691602543248;TFAP2{A,C}:0.668515013599;TBP:0.667023810548;MAFB:0.66180011479;GCM1,2:0.648283700359;NR3C1:0.635698581438;ATF6:0.630551067325;HMGA1,2:0.62879212817;EBF1:0.62608887948;FOX{I1,J2}:0.557810162149;TLX1..3_NFIC{dimer}:0.551434936008;GFI1B:0.534969931227;TFCP2:0.529418349729;FOSL2:0.524734499685;NFE2L2:0.522350016729;ZNF238:0.514904318332;KLF4:0.498082582421;MYBL2:0.492012627879;SMAD1..7,9:0.473354241257;FOXL1:0.448494503771;BACH2:0.435971873623;HMX1:0.423077014112;NR5A1,2:0.418710864591;AR:0.409766153631;ZIC1..3:0.402831218807;LHX3,4:0.395166185014;FOS_FOS{B,L1}_JUN{B,D}:0.379687732526;XCPE1{core}:0.37210637532;HSF1,2:0.351663507619;SOX{8,9,10}:0.344532985639;POU6F1:0.322598134914;MEF2{A,B,C,D}:0.317214403483;TEF:0.312488659872;NKX3-2:0.310652074865;ELK1,4_GABP{A,B1}:0.308213104041;JUN:0.306728190525;ESR1:0.290367127266;GZF1:0.273816535277;MTE{core}:0.271253937484;ZNF384:0.264731439197;XBP1:0.26305780639;LEF1_TCF7_TCF7L1,2:0.259436664922;POU1F1:0.259253986494;NR6A1:0.244615560267;REST:0.23638316121;RXR{A,B,G}:0.235708823264;HLF:0.235334631388;VSX1,2:0.209138133076;SOX2:0.206855709615;NHLH1,2:0.205621760808;TAL1_TCF{3,4,12}:0.2016107689;NFE2:0.19500078166;UFEwm:0.194364313291;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.179414954515;GATA6:0.168563937556;NKX2-3_NKX2-5:0.16437637381;HIC1:0.162403226779;HBP1_HMGB_SSRP1_UBTF:0.153466624137;ALX4:0.144813418764;bHLH_family:0.138839919221;POU2F1..3:0.137369627886;ARID5B:0.124508363036;GTF2I:0.123895138223;PRDM1:0.118313190101;NANOG{mouse}:0.110750137765;MYOD1:0.105812044045;TFAP2B:0.105271439065;NANOG:0.0895661393571;CDC5L:0.081094728291;AHR_ARNT_ARNT2:0.06101716491;NFKB1_REL_RELA:0.0576804629357;HNF1A:0.0566799731667;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0514376145257;ZNF423:0.0466416693458;PBX1:0.0370315257636;PAX5:0.0342340633776;NKX2-2,8:0.0192970264889;NFIX:0.00802384982266;SPZ1:-0.00865058634691;NKX3-1:-0.013427132743;RXRA_VDR{dimer}:-0.0147055118797;EVI1:-0.0251123003301;ETS1,2:-0.0271449501028;DBP:-0.043350368236;FOX{F1,F2,J1}:-0.0518366565446;ALX1:-0.0538980625857;RUNX1..3:-0.0751439041785;PAX1,9:-0.111169229643;MAZ:-0.121843547767;ZNF143:-0.125235627039;PAX2:-0.139389881256;MZF1:-0.140540167156;TFDP1:-0.142553629567;CEBPA,B_DDIT3:-0.146613228966;PDX1:-0.149902365323;LMO2:-0.157683235367;PITX1..3:-0.165879366971;GATA4:-0.169588733955;OCT4_SOX2{dimer}:-0.173656934548;ZFP161:-0.176547531566;PATZ1:-0.180845729294;EP300:-0.216650387739;MYB:-0.217183484607;TOPORS:-0.219053158256;POU5F1:-0.220821710969;SP1:-0.225549157785;ESRRA:-0.228385395805;ELF1,2,4:-0.241700539424;FOXA2:-0.25355608363;GFI1:-0.261734114274;YY1:-0.262839867328;RFX1:-0.267527729747;NRF1:-0.281416672003;STAT2,4,6:-0.284455942585;AIRE:-0.289229163883;ATF2:-0.289853733481;MTF1:-0.308777791314;DMAP1_NCOR{1,2}_SMARC:-0.336407133998;RREB1:-0.352575252239;HNF4A_NR2F1,2:-0.362197571743;RORA:-0.362618180717;EGR1..3:-0.378346895587;PRRX1,2:-0.399028988326;SPI1:-0.424610559225;ZEB1:-0.442625568578;MYFfamily:-0.450323325323;FOX{D1,D2}:-0.455210550226;TGIF1:-0.457367301071;HOX{A6,A7,B6,B7}:-0.463208777292;T:-0.466772209922;NFIL3:-0.46992921107;SPIB:-0.472832231924;MED-1{core}:-0.528906433098;SNAI1..3:-0.533883176222;HOXA9_MEIS1:-0.535050653827;PAX6:-0.535169900937;PAX3,7:-0.563322792498;ATF4:-0.659977038627;NFY{A,B,C}:-0.66460904689;ATF5_CREB3:-0.685913686694;HOX{A4,D4}:-0.6985259115;FOXQ1:-0.71468005656;TLX2:-0.751805483155;CREB1:-0.756739881171;PAX4:-0.759852700529;IKZF2:-0.760717977752;CUX2:-0.77071152849;E2F1..5:-0.771634704568;FOXM1:-0.779281321007;NKX2-1,4:-0.791686625064;SREBF1,2:-0.793135854948;IRF1,2:-0.831113659217;NR1H4:-0.845516958707;IRF7:-0.878677656124;FOXD3:-0.928677751275;SOX5:-0.947899599516;RFX2..5_RFXANK_RFXAP:-0.95648300633;CDX1,2,4:-0.973642102348;BREu{core}:-1.02823898174;ZBTB16:-1.02940079777;STAT1,3:-1.09776376735;FOXP3:-1.10265957168;FOXN1:-1.10295778058;BPTF:-1.18439507682;FOXP1:-1.27200010821;FOXO1,3,4:-1.27728202876;NKX6-1,2:-1.41240287779;RBPJ:-2.18996424925
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11290-117A3;search_select_hide=table117:FF:11290-117A3
}}
}}

Latest revision as of 16:31, 3 June 2020

Name:Smooth Muscle Cells - Umbilical Artery, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11091
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueumbilical artery
dev stageinfant
sexfemale
ageneonatal
cell typesmooth muscle cell
cell lineNA
companyCell Applications
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number1222
catalog numberCA252-R10n
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005587
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11091 CAGE DRX008507 DRR009379
Accession ID Hg19

Library idBAMCTSS
CNhs11091 DRZ000804 DRZ002189
Accession ID Hg38

Library idBAMCTSS
CNhs11091 DRZ012154 DRZ013539
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00005587
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10005.GTCCGC sRNA-Seq DRX037063 DRR041429
Accession ID Hg19

Library idBAMCTSS
SRhi10005.GTCCGC DRZ007071


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.178
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.217
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.419
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-9.645669e-4
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.36
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.386
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.148
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.232
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.151
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.0802
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0167
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0802
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.107
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.00575
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.148
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.148
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.472
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.95
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.304
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.384
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11091

Jaspar motifP-value
MA0002.20.212
MA0003.10.277
MA0004.10.484
MA0006.10.201
MA0007.10.14
MA0009.10.154
MA0014.10.915
MA0017.10.508
MA0018.20.00426
MA0019.10.303
MA0024.16.40844e-8
MA0025.10.336
MA0027.10.729
MA0028.10.915
MA0029.10.124
MA0030.10.709
MA0031.10.162
MA0035.20.2
MA0038.10.237
MA0039.20.927
MA0040.10.535
MA0041.10.343
MA0042.10.659
MA0043.10.057
MA0046.10.919
MA0047.20.681
MA0048.10.172
MA0050.11.31471e-9
MA0051.10.00519
MA0052.10.376
MA0055.10.36
MA0057.10.332
MA0058.10.241
MA0059.10.343
MA0060.10.00794
MA0061.10.395
MA0062.20.172
MA0065.20.301
MA0066.10.152
MA0067.10.0366
MA0068.10.99
MA0069.10.883
MA0070.10.72
MA0071.10.773
MA0072.10.229
MA0073.10.36
MA0074.10.236
MA0076.10.608
MA0077.10.0671
MA0078.10.142
MA0079.20.872
MA0080.20.00343
MA0081.10.182
MA0083.12.68064e-10
MA0084.10.68
MA0087.10.789
MA0088.10.424
MA0090.10.00124
MA0091.10.337
MA0092.10.0358
MA0093.10.449
MA0099.23.02487e-15
MA0100.10.161
MA0101.10.341
MA0102.20.0424
MA0103.10.278
MA0104.20.208
MA0105.10.352
MA0106.10.00805
MA0107.10.151
MA0108.25.51589e-5
MA0111.10.0595
MA0112.20.0126
MA0113.10.229
MA0114.10.646
MA0115.10.407
MA0116.10.586
MA0117.10.639
MA0119.10.115
MA0122.10.807
MA0124.10.343
MA0125.10.986
MA0131.10.416
MA0135.10.446
MA0136.10.189
MA0137.20.0596
MA0138.20.686
MA0139.10.65
MA0140.10.188
MA0141.10.771
MA0142.10.722
MA0143.10.93
MA0144.10.851
MA0145.10.113
MA0146.10.315
MA0147.10.527
MA0148.10.327
MA0149.10.479
MA0150.10.0339
MA0152.10.851
MA0153.10.973
MA0154.10.246
MA0155.10.0708
MA0156.10.776
MA0157.10.604
MA0159.10.544
MA0160.10.708
MA0162.10.0228
MA0163.10.0158
MA0164.10.756
MA0258.10.162
MA0259.10.904



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11091

Novel motifP-value
10.602
100.449
1000.918
1010.392
1020.816
1030.266
1040.397
1050.64
1060.0158
1070.0302
1080.438
1090.102
110.12
1100.518
1110.744
1120.511
1130.109
1140.132
1150.903
1160.168
1170.728
1180.804
1190.0683
120.698
1200.11
1210.503
1220.469
1230.0103
1240.379
1250.829
1260.815
1270.561
1280.145
1290.989
130.991
1300.548
1310.0788
1320.906
1330.885
1340.177
1350.0216
1360.853
1370.631
1380.236
1390.0832
140.621
1400.483
1410.152
1420.869
1430.00956
1440.598
1450.189
1460.302
1470.206
1480.818
1490.121
150.421
1500.0797
1510.484
1520.0233
1530.605
1540.896
1550.0529
1560.789
1570.441
1580.0537
1590.362
160.205
1600.0915
1610.945
1620.435
1630.712
1640.472
1650.586
1660.915
1670.628
1680.48
1690.0701
170.0911
180.0983
190.129
20.34
200.534
210.797
220.203
230.0487
240.0927
250.496
260.676
270.724
280.416
290.308
30.439
300.594
310.372
322.73488e-4
330.487
340.482
350.493
360.477
370.054
380.914
390.42
40.333
400.185
410.302
420.587
430.31
440.713
450.342
460.218
470.335
480.224
490.498
50.487
500.479
510.889
520.416
530.48
540.777
550.569
560.385
570.276
580.589
590.116
60.981
600.375
610.906
620.83
630.14
640.52
650.353
660.687
670.342
680.205
690.624
70.994
700.0861
710.41
720.662
730.0109
740.954
750.357
760.458
770.0253
780.487
790.317
80.0853
800.376
810.652
820.274
830.979
840.786
850.0857
860.76
870.0187
880.0874
890.0661
90.268
900.993
910.743
920.338
930.291
940.74
950.295
960.908
970.402
980.457
990.00219



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11091


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0000393 (electrically responsive cell)
0000183 (contractile cell)
0000187 (muscle cell)
0000192 (smooth muscle cell)
0000211 (electrically active cell)
0000255 (eukaryotic cell)
0000359 (vascular associated smooth muscle cell)
0002594 (smooth muscle cell of the umbilical artery)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001637 (artery)
0000483 (epithelium)
0000479 (tissue)
0000055 (vessel)
0004111 (anatomical conduit)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0003914 (epithelial tube)
0000025 (tube)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0010260 (umbilical blood vessel)
0003509 (arterial blood vessel)
0007500 (epithelial tube open at both ends)
0001981 (blood vessel)
0002049 (vasculature)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0001310 (umbilical artery)
0004535 (cardiovascular system)
0004572 (arterial system)
0004537 (blood vasculature)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000167 (smooth muscle cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000514 (smooth muscle myoblast)

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