FF:10084-102B3: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00005459 | ||
| | |accession_numbers=CAGE;DRX008625;DRR009497;DRZ000922;DRZ002307;DRZ012272;DRZ013657 | ||
| | |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000479,UBERON:0004121,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0001017,UBERON:0001016 | ||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010012 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.95!881.12!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.63!425.54!OLIG1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.14!136.68!PEG3;;chr21:34398234..34398250,+!p1@OLIG2!2.14!136.68!OLIG2;;chr22:38380543..38380569,-!p1@SOX10!2.08!120.20!SOX10;;chr17:53342311..53342400,+!p1@HLF!2.07!131.83!HLF;;chr9:77112244..77112262,+!p1@RORB!2.03!117.29!RORB;;chr21:34442540..34442560,+!p2@OLIG1!2.00!99.84!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!1.94!177.39!C11orf9;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.90!78.52!SEBOX;;chr4:57547454..57547469,-!p1@HOPX!1.90!77.55!HOPX;;chr1:2461692..2461710,-!p1@HES5!1.85!69.79!HES5;;chr3:181429704..181429722,+!p1@SOX2!1.83!66.88!SOX2;;chr16:1031762..1031781,+!p1@SOX8!1.83!66.88!SOX8;;chr14:29235961..29236008,+!p1@FOXG1!1.83!65.91!FOXG1;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.77!58.16!POU3F3;;chr2:95963052..95963106,+!p1@KCNIP3!1.77!58.16!KCNIP3;;chr12:106976774..106976788,+!p1@RFX4!1.73!52.34!RFX4;;chrX:25034067..25034088,-!p1@ARX!1.72!51.37!ARX;;chr9:126774018..126774055,+!p1@LHX2!1.70!49.44!LHX2;;chr10:134599649..134599653,-!p1@NKX6-2!1.70!49.44!NKX6-2;;chr15:80696703..80696754,+!p1@ARNT2!1.68!61.07!ARNT2;;chr15:80733570..80733659,+!p2@ARNT2!1.66!44.59!ARNT2;;chr2:2334997..2335053,-!p1@MYT1L!1.66!44.59!MYT1L;;chr12:54779511..54779577,-!p5@ZNF385A!1.61!39.74!ZNF385A;;chr2:60781201..60781258,-!p3@BCL11A!1.59!37.80!BCL11A;;chr9:114287433..114287513,+!p1@ZNF483!1.58!93.06!ZNF483;;chr15:80735246..80735321,+!p3@ARNT2!1.58!36.83!ARNT2;;chr1:214161272..214161322,+!p1@PROX1!1.57!50.41!PROX1;;chr2:162272785..162272836,+!p1@TBR1!1.57!35.87!TBR1;;chr12:106976678..106976708,+!p2@RFX4!1.57!35.87!RFX4;;chr4:81118647..81118666,+!p1@PRDM8!1.55!45.56!PRDM8;;chr8:40755333..40755352,-!p1@ZMAT4!1.54!33.93!ZMAT4;;chr17:37764128..37764258,-!p1@NEUROD2!1.53!32.96!NEUROD2;;chr22:41763452..41763466,+!p2@TEF!1.53!32.96!TEF;;chr5:88178983..88179012,-!p1@MEF2C!1.52!239.43!MEF2C;;chr19:46801639..46801699,+!p1@HIF3A!1.52!31.99!HIF3A;;chr10:48355030..48355090,+!p1@ZNF488!1.51!39.74!ZNF488;;chr14:29234581..29234601,+!p2@FOXG1!1.49!30.05!FOXG1;;chr14:33403881..33403924,+!p1@NPAS3!1.48!29.08!NPAS3;;chr2:145277882..145277967,-!p3@ZEB2!1.43!43.62!ZEB2;;chr11:8102846..8102892,+!p1@TUB!1.42!34.90!TUB;;chr8:53322304..53322340,-!p1@ST18!1.40!24.23!ST18;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.38!23.26!POU3F3;;chr2:95963120..95963136,+!p2@KCNIP3!1.38!23.26!KCNIP3;;chr21:34442584..34442587,+!p3@OLIG1!1.38!23.26!OLIG1;;chr10:64134120..64134183,+!p1@ZNF365!1.36!26.17!ZNF365;;chrY:21906594..21906622,-!p1@KDM5D!1.35!21.33!KDM5D;;chr16:51185318..51185348,-!p2@SALL1!1.35!21.33!SALL1;;chr19:38720294..38720348,-!p1@DPF1!1.34!26.17!DPF1;;chr11:113930425..113930471,+!p1@ZBTB16!1.33!29.08!ZBTB16;;chr19:13135386..13135435,+!p4@NFIX!1.33!20.36!NFIX;;chr19:13135582..13135600,+!p3@NFIX!1.31!19.39!NFIX;;chr20:62680984..62680999,-!p1@SOX18!1.30!25.20!SOX18;;chr2:166326200..166326216,+!p1@CSRNP3!1.29!27.14!CSRNP3;;chr8:145560371..145560449,-!p1@SCRT1!1.29!18.42!SCRT1;;chr6:19837592..19837621,+!p1@ID4!1.27!105.66!ID4;;chr5:88179017..88179046,-!p2@MEF2C!1.27!69.79!MEF2C;;chr18:53070846..53070902,-!p6@TCF4!1.27!17.45!TCF4;;chr11:31832658..31832681,-!p1@PAX6!1.27!17.45!PAX6;;chr12:54785074..54785122,-!p2@ZNF385A!1.26!26.17!ZNF385A;;chr2:60780607..60780624,-!p2@BCL11A!1.24!49.44!BCL11A;;chr12:26277817..26277863,-!p2@BHLHE41!1.24!22.29!BHLHE41;;chr11:125034640..125034655,+!p1@PKNOX2!1.24!16.48!PKNOX2;;chr4:57522598..57522664,-!p3@HOPX!1.24!16.48!HOPX;;chr5:92919375..92919438,+!p6@NR2F1!1.23!17.45!NR2F1;;chr19:33793430..33793447,-!p1@CEBPA!1.22!64.95!CEBPA;;chr3:126076242..126076257,-!p1@KLF15!1.22!19.39!KLF15;;chr3:181429741..181429767,+!p2@SOX2!1.22!15.51!SOX2;;chr9:126774058..126774081,+!p3@LHX2!1.22!15.51!LHX2;;chr4:57522166..57522260,-!p2@HOPX!1.19!16.48!HOPX;;chr2:73520667..73520683,-!p1@EGR4!1.19!14.54!EGR4;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.19!14.54!SEBOX;;chr19:30863271..30863338,+!p1@ZNF536!1.19!14.54!ZNF536;;chr8:145560111..145560165,-!p2@SCRT1!1.19!14.54!SCRT1;;chr11:125034605..125034636,+!p2@PKNOX2!1.19!14.54!PKNOX2;;chr19:46800289..46800327,+!p2@HIF3A!1.19!14.54!HIF3A;;chr1:244214577..244214593,+!p1@ZNF238!1.19!14.54!ZNF238;;chr1:151032860..151032918,+!p1@MLLT11!1.16!158.00!MLLT11;;chr17:38256822..38256851,-!p1@NR1D1!1.16!105.66!NR1D1;;chr6:126070769..126070801,+!p1@HEY2!1.16!15.51!HEY2;;chr15:80696666..80696700,+!p4@ARNT2!1.16!13.57!ARNT2;;chr20:30433396..30433414,-!p1@FOXS1!1.16!13.57!FOXS1;;chr11:31839488..31839515,-!p3@PAX6!1.16!13.57!PAX6;;chr12:103351444..103351461,+!p1@ASCL1!1.16!13.57!ASCL1;;chr13:95364784..95364806,-!p1@SOX21!1.16!13.57!SOX21;;chr14:29236269..29236285,+!p3@FOXG1!1.16!13.57!FOXG1;;chrX:82763292..82763317,+!p1@POU3F4!1.16!13.57!POU3F4;;chr17:7492684..7492778,-!p2@SOX15!1.14!27.14!SOX15;;chr2:2335109..2335134,-!p2@MYT1L!1.13!12.60!MYT1L;;chr10:119302232..119302265,+!p1@EMX2!1.13!12.60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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006238,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 41: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|is_a=EFO:0002091;;FF: | |hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520donor1.CNhs11796.10084-102B3.hg19.nobarcode.bam | ||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520donor1.CNhs11796.10084-102B3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520donor1.CNhs11796.10084-102B3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520donor1.CNhs11796.10084-102B3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/brain%252c%2520adult%252c%2520donor1.CNhs11796.10084-102B3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10084-102B3 | |||
|is_a=EFO:0002091;;FF:0010012 | |||
|is_obsolete= | |||
|library_id=CNhs11796 | |||
|library_id_phase_based=2:CNhs11796 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10084 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10084 | |||
|name=brain, adult, donor1 | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs11796,LSID820,release009,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,-0.160318030086386,0,-0.0427427956488631,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534859218241439,0,0,0,0.147159551208692,0,0.370192256948536,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.234565009121771,0,0,0,0,0,0,0,0,0.122944530095857,0,0.114813939339907,0,0.591954359268079,0,0.273083711174147,0.294319102417383,-0.0969923612426051,0,0,0.196975475204286,0,0,0,0,0,0,0,0,0.468150153216593,0,0,0,0,0,0,0,0,0,0,0.294319102417383,0,0.0891740144912245,0,0.294319102417383,0.651101734108459,0.147159551208692,0,0.182896330801112,0.370074754832964,0.502752768720149,0,0.294319102417383,0.147159551208692,0,0.196283751179677,-0.138477200800895,0,0,0,0,0,0,0,0,0,0.147159551208692,0,0,0,0,0,0,0,0.0507859572862305,0,0,0,0,-0.145446607019387,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.196283751179677,0.591954359268079,0,0,0.294319102417383,0,0,0.294319102417383,0,0.294319102417383,0,0,0.344775483982515,0.530613609312701,0.214096009837858,0.324635010693121,0.147159551208692,0,0.593370301053643,0,0.294319102417383,0,0.246918091921813,0.294319102417383,0,0.294319102417383,0,0.591954359268079,-0.128119866952565,0,0.417737601627278,0.359212652360548,0,0,0.294319102417383,0.128534270124841,0.286482128369672,0,0.319664295913254,0.399805892139225,0,0,0,0.104961546893359,0.509893402429195,0.125431355992828,0.471074875474339,0.385429984893176,1.36725624851521,0.449585282447925,0.238606605636201,0,0,0.147159551208692,0.854899386544761,0.473673111763918,0,0,0.876724415826394,0.835078960098177,0,0,1.52500884535532,0,-0.0100951010662892,-0.130322797988237,0,0,0,0,0,0,0,0,0,0,0.833529357256585,0,0,0.325960591282572,0.141161556537624,0.106051750530806,0,0,0.101518155882492,0.308122977550898,0.294319102417383,0.236649923233759,-0.373286155956567,-0.0564169108794754,0.30819715989873,-0.157287064438781,0.171289928136548,0.96355931409974,0.322668097242798,0.302048097766411,0.652860013708611,0.91939577321911,-0.189981719549847,0,0.63623906780362,0.315199245611674,0.504662330015986,-0.389212871455326,0.259334605295373,-0.0399577399943563,0.637246991906813,0,0.294319102417383,0.0484092308425574,0.0017643289705892,0.224841496902761,0.162286868243955,0.343414642779811,1.0906002163778,0.867890924217281,0.608606756006894,0.550243657418459,0.0792661987620418,1.42881795642998,0.734014315396153,0.341551526698681,0.0929841082933065,0.114588430605916,0.766908116208019,0.322353290436194,0.35758719841628,-0.491593004689939,0.0723560554111877,0.32429477174976,0.349551895445604,0.765185096179217,0.850776736643717,0.626611525877828,0.395643447322438,0.688182228589867,0,0.0131771283966672,0,0,0,0.33695424574593,0.891276982551438,-0.14759455370979,1.19541405596613,0.455326667034322,0.33818218157296,0.656167551064417,0,-0.06321100374429,0.390066855465527,0.143900040727401,-0.146009897457394,0.359441946481055,0.299320554671843,0.144787689868251,0.175057358516294,0.194615113603324,-0.0280677945686176,0.711186435022915,1.82029677820512,-0.0422897051858643,0.182896330801112,0.0787513646235876,-0.320789711573633,0.224106634411429,0.380023320741306,0.423959185240473,0.518429621585993,0.812553893535282,0.284765325852274,0.684247902029941,0,-0.345419578543293,0.987844714125527,-0.0177840503666457,0.0929770723120765,0.522008241437503,0.651017016819508,0.502950007370974,-0.0696285846604834,0.185238465061616,0.504208022528986,1.26664522824659,0.294319102417383,0.306290154717463,0.145378780919938,0,0.143952019082744,0.651101734108459,0.467780809873459,0.244464601424815,0.16073087242871,0.577176090125557,1.68571760153364,1.10147187472569,0.723609847356077,-0.235476037764389,0,0.121535315730633,-0.0172485549453171,0.162692075012724,0.178348028982449,0,0,0.487880902421928,0.468150153216593,1.02911286639401,-0.0139737045499512,0.575971575821972,0.969092915632332,-0.253326341486756,0.599645396138125,0.235468304840678,0.0580290276434772,0.294319102417383,0.116791336452208,1.54315688382244,0.159402620900458,0,0,0.195757194676896,0.177690989427251,0,0.514556433197005,1.65886298409661,0.360833523320304,0,0,0,0,0,0,0.213839569504626,0.505460587924687,-0.354833330216448,0,0.109377521989756,0,0.294319102417383,0.294319102417383,0,0,0.294319102417383,0.131095820888834,0,-0.650091456868017,0.0401763052545588,0.565164812913447,0,0,0,0,-0.215723402553475,0.484945666495143,0.766908116208019,0.336287446718962,0,0,0,0.591954359268079,0.208178112628172,0,0,0,0.29597717963404,-0.057730457053664,-0.178992678162017,0,0,0,-0.27695440160179,0,0.124915922276064,0,0.0571940997749008,0.117445153621312,0,0,0.240166773616846,0,0.117485607680345,1.01988999517884,0.102985825905623,-0.0771456559282855,-1.51461732155133,0.10872489836086,0.0321375352919875,0,0.330607227478192,0,0,-0.567794168416654,0,0,0.339793455148576,0,0,0,0,0,0,0.253835640816838,0,0,0,0,0,0.468150153216593,0,0,0,0,0.294319102417383,0.418745261314394,0.375926096558083,0,0,0.294319102417383,0,0,0,0,0.123053528129788,0.119719367150829,0,0,0,0,0,0.468150153216593,0,0,-0.177106837245859,0,0,0,0,0,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0,-0.277362132193514,0,0,0,0,0,0,0,0.079370070248766,0,0,0,0,0,-0.123319086035448,-0.0427427956488631,0,0,0,0,0,0,0,0.616443684345347,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0,0.147159551208692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128483205315577,-0.792264507396393,0.530052256242336,0.604069466578528,0.380980290682667,0,0,0.063348827000998,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232951174932469,0,0,0,0,0,0,0,0.370192256948536,0,0,-0.0920328098005262,0,0,0,0,0.116482773283665,0.167291590630765,-0.0539017640484128,-0.0491453232148505,0.338363500927559,0,0,0,0.55447907207703,0.591954359268079,0.18241570850119,0.233514395949275,0.294319102417383,-0.066777387418901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| |||
|rna_box=102 | |||
|rna_catalog_number=Cat: 636643 Lot: 8101369A-4 | |||
|rna_concentration=1 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0 | |||
|rna_lot_number=8101369A-4 | |||
|rna_od260/230= | |||
|rna_od260/280= | |||
|rna_position=B3 | |||
|rna_rin= | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=102B3 | |||
|rna_weight_ug=10 | |||
|sample_age= | |||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |||
|sample_cell_line= | |||
|sample_cell_lot=NA | |||
|sample_cell_type=CELL MIXTURE - tissue sample | |||
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest) | |||
|sample_company=Clontech | |||
|sample_description= | |||
|sample_dev_stage=18 years old adult | |||
|sample_disease=normal | |||
|sample_donor(cell lot)=1 | |||
|sample_ethnicity=C | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0044424;intracellular part;0!GO:0005622;intracellular;0!GO:0005737;cytoplasm;2.34477518848546e-171!GO:0044444;cytoplasmic part;1.36301727039826e-129!GO:0043226;organelle;3.52769875821284e-74!GO:0043229;intracellular organelle;9.31771849846193e-74!GO:0043227;membrane-bound organelle;2.35138617235241e-71!GO:0043231;intracellular membrane-bound organelle;3.11255095178583e-71!GO:0044422;organelle part;1.57349875002347e-63!GO:0044446;intracellular organelle part;1.86008798013957e-62!GO:0005739;mitochondrion;2.41555518745643e-56!GO:0005515;protein binding;6.89244922638138e-54!GO:0032991;macromolecular complex;3.23439198246868e-53!GO:0031090;organelle membrane;1.57801860717048e-49!GO:0044429;mitochondrial part;7.37716144324233e-42!GO:0030529;ribonucleoprotein complex;6.41138653558383e-37!GO:0016043;cellular component organization and biogenesis;2.75974626467821e-34!GO:0031975;envelope;1.90733807616372e-31!GO:0031967;organelle envelope;3.01282137831735e-31!GO:0015031;protein transport;1.43781815204665e-30!GO:0043234;protein complex;4.57581584327325e-30!GO:0033036;macromolecule localization;6.018070538781e-30!GO:0003723;RNA binding;1.73489679278634e-28!GO:0005740;mitochondrial envelope;3.03187681539821e-28!GO:0008104;protein localization;7.26752418367925e-28!GO:0019538;protein metabolic process;7.65218728158889e-28!GO:0031966;mitochondrial membrane;1.82160993662503e-27!GO:0045184;establishment of protein localization;2.63946653561337e-27!GO:0005829;cytosol;1.21089348580264e-26!GO:0005840;ribosome;4.32882357759464e-26!GO:0043233;organelle lumen;2.69936198161572e-25!GO:0031974;membrane-enclosed lumen;2.69936198161572e-25!GO:0009058;biosynthetic process;3.71424350344077e-25!GO:0044260;cellular macromolecule metabolic process;4.19482728138889e-25!GO:0019866;organelle inner membrane;8.11665321273238e-25!GO:0046907;intracellular transport;1.5705390831076e-24!GO:0044267;cellular protein metabolic process;4.09787399451061e-24!GO:0016192;vesicle-mediated transport;4.7831336778692e-24!GO:0005743;mitochondrial inner membrane;6.67881008687362e-24!GO:0006119;oxidative phosphorylation;2.80798647614097e-23!GO:0051641;cellular localization;5.03456949410407e-22!GO:0003735;structural constituent of ribosome;5.37579877313578e-22!GO:0044238;primary metabolic process;1.11892106374833e-21!GO:0051649;establishment of cellular localization;1.17236292663085e-21!GO:0044237;cellular metabolic process;3.34075274824278e-21!GO:0005794;Golgi apparatus;4.75484862972918e-21!GO:0044249;cellular biosynthetic process;3.80265513366588e-20!GO:0031982;vesicle;5.76304338912308e-20!GO:0031988;membrane-bound vesicle;1.10376382775327e-19!GO:0012505;endomembrane system;2.11924879972763e-19!GO:0031410;cytoplasmic vesicle;2.42173031380027e-19!GO:0006412;translation;3.0581989277686e-19!GO:0016023;cytoplasmic membrane-bound vesicle;4.39202525987308e-19!GO:0033279;ribosomal subunit;6.26255239676225e-19!GO:0044455;mitochondrial membrane part;2.18324999269705e-18!GO:0006886;intracellular protein transport;2.43200816738763e-18!GO:0005746;mitochondrial respiratory chain;1.13870584072032e-17!GO:0009059;macromolecule biosynthetic process;1.86731675453009e-17!GO:0044428;nuclear part;1.94938300568474e-17!GO:0005783;endoplasmic reticulum;6.79461745316622e-17!GO:0031980;mitochondrial lumen;1.00478523791251e-16!GO:0005759;mitochondrial matrix;1.00478523791251e-16!GO:0016071;mRNA metabolic process;4.87285493823577e-16!GO:0050136;NADH dehydrogenase (quinone) activity;1.74727916605261e-15!GO:0003954;NADH dehydrogenase activity;1.74727916605261e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.74727916605261e-15!GO:0006810;transport;4.25980227708037e-15!GO:0006396;RNA processing;9.28760267583137e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.29582870628466e-14!GO:0065003;macromolecular complex assembly;2.21530471638464e-14!GO:0008380;RNA splicing;3.40504108411753e-14!GO:0043170;macromolecule metabolic process;9.50186288815012e-14!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.30717562498891e-13!GO:0030964;NADH dehydrogenase complex (quinone);1.58868030106581e-13!GO:0045271;respiratory chain complex I;1.58868030106581e-13!GO:0005747;mitochondrial respiratory chain complex I;1.58868030106581e-13!GO:0000166;nucleotide binding;2.01430576953263e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.51791490789015e-13!GO:0042773;ATP synthesis coupled electron transport;2.51791490789015e-13!GO:0016874;ligase activity;2.73751750068845e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.87660610359262e-13!GO:0051186;cofactor metabolic process;5.0504003044156e-13!GO:0006397;mRNA processing;5.14970716025375e-13!GO:0006996;organelle organization and biogenesis;6.25729711248423e-13!GO:0044445;cytosolic part;1.14688814868375e-12!GO:0022607;cellular component assembly;1.23865357131783e-12!GO:0048770;pigment granule;1.28002649137354e-12!GO:0042470;melanosome;1.28002649137354e-12!GO:0043412;biopolymer modification;3.12986003875247e-12!GO:0006464;protein modification process;3.99531520648009e-12!GO:0051234;establishment of localization;5.45449053100684e-12!GO:0051179;localization;6.09622415300899e-12!GO:0006512;ubiquitin cycle;6.91572514036718e-12!GO:0030135;coated vesicle;9.72309484861436e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.48332183624399e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;1.65715985587821e-11!GO:0016462;pyrophosphatase activity;1.92521823140756e-11!GO:0043687;post-translational protein modification;3.41489666691532e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.74244168929072e-11!GO:0007399;nervous system development;8.16262025042723e-11!GO:0019829;cation-transporting ATPase activity;8.3274749734468e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.54515392679082e-11!GO:0044431;Golgi apparatus part;1.00390213029649e-10!GO:0044432;endoplasmic reticulum part;1.38833814656713e-10!GO:0017111;nucleoside-triphosphatase activity;1.41774042292591e-10!GO:0044248;cellular catabolic process;1.61782069833472e-10!GO:0045045;secretory pathway;2.05243458316871e-10!GO:0048193;Golgi vesicle transport;2.46070799066064e-10!GO:0015935;small ribosomal subunit;2.59618816758649e-10!GO:0006457;protein folding;3.06968404163024e-10!GO:0005681;spliceosome;3.67835355437788e-10!GO:0007264;small GTPase mediated signal transduction;4.53889170418607e-10!GO:0032553;ribonucleotide binding;5.40912788404753e-10!GO:0032555;purine ribonucleotide binding;5.40912788404753e-10!GO:0017076;purine nucleotide binding;6.71671095578167e-10!GO:0006732;coenzyme metabolic process;1.03196035536508e-09!GO:0016044;membrane organization and biogenesis;1.11513183866028e-09!GO:0008092;cytoskeletal protein binding;1.16633660824239e-09!GO:0015934;large ribosomal subunit;1.50395946227001e-09!GO:0031981;nuclear lumen;1.61060098665692e-09!GO:0006793;phosphorus metabolic process;1.61060098665692e-09!GO:0006796;phosphate metabolic process;1.61060098665692e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.09763064426151e-09!GO:0051082;unfolded protein binding;2.49098688756446e-09!GO:0005789;endoplasmic reticulum membrane;3.61162237017425e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.63886235383923e-09!GO:0043005;neuron projection;4.11917962007761e-09!GO:0015986;ATP synthesis coupled proton transport;4.99866947209277e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.99866947209277e-09!GO:0009055;electron carrier activity;5.23587859031779e-09!GO:0005768;endosome;1.19460595462742e-08!GO:0030136;clathrin-coated vesicle;1.97397446545898e-08!GO:0006605;protein targeting;2.11174636690227e-08!GO:0044265;cellular macromolecule catabolic process;2.27540068741782e-08!GO:0008135;translation factor activity, nucleic acid binding;2.32193890960811e-08!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.37847721183006e-08!GO:0000139;Golgi membrane;2.93022715963593e-08!GO:0000502;proteasome complex (sensu Eukaryota);4.19950108090292e-08!GO:0009060;aerobic respiration;4.56784517781219e-08!GO:0008639;small protein conjugating enzyme activity;4.7016545638131e-08!GO:0003924;GTPase activity;4.7016545638131e-08!GO:0022618;protein-RNA complex assembly;5.74424714915072e-08!GO:0008565;protein transporter activity;5.96739018830901e-08!GO:0005761;mitochondrial ribosome;6.06852661442223e-08!GO:0000313;organellar ribosome;6.06852661442223e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;7.60785490092818e-08!GO:0015078;hydrogen ion transmembrane transporter activity;8.01188295035419e-08!GO:0030695;GTPase regulator activity;8.12259397740971e-08!GO:0004842;ubiquitin-protein ligase activity;8.9385288004617e-08!GO:0051603;proteolysis involved in cellular protein catabolic process;9.63911143615778e-08!GO:0006163;purine nucleotide metabolic process;9.71550875480362e-08!GO:0046034;ATP metabolic process;1.01065629114332e-07!GO:0005525;GTP binding;1.01065629114332e-07!GO:0009141;nucleoside triphosphate metabolic process;1.18940783758862e-07!GO:0009150;purine ribonucleotide metabolic process;1.26032103995511e-07!GO:0006511;ubiquitin-dependent protein catabolic process;1.27425913182935e-07!GO:0045333;cellular respiration;1.36208344604486e-07!GO:0019941;modification-dependent protein catabolic process;1.444200566061e-07!GO:0043632;modification-dependent macromolecule catabolic process;1.444200566061e-07!GO:0005083;small GTPase regulator activity;1.46933581563813e-07!GO:0006164;purine nucleotide biosynthetic process;1.55172877845774e-07!GO:0044257;cellular protein catabolic process;1.56732787582804e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.61873326136119e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.61873326136119e-07!GO:0006461;protein complex assembly;1.66666635504952e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.91160767166068e-07!GO:0009199;ribonucleoside triphosphate metabolic process;2.12056334021495e-07!GO:0006754;ATP biosynthetic process;2.16204925081324e-07!GO:0006753;nucleoside phosphate metabolic process;2.16204925081324e-07!GO:0015631;tubulin binding;2.31672209050727e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.46928559632518e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.30987693314116e-07!GO:0019787;small conjugating protein ligase activity;3.55149117494556e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.5765347149952e-07!GO:0009259;ribonucleotide metabolic process;4.84774168993865e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.17454961774071e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.17454961774071e-07!GO:0009142;nucleoside triphosphate biosynthetic process;7.05467073884387e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;7.05467073884387e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.20483463575612e-07!GO:0009056;catabolic process;7.48931831002164e-07!GO:0051187;cofactor catabolic process;8.05837310891647e-07!GO:0005905;coated pit;1.06650235256564e-06!GO:0009057;macromolecule catabolic process;1.07685284190805e-06!GO:0019717;synaptosome;1.28508828192443e-06!GO:0009260;ribonucleotide biosynthetic process;1.53724474031539e-06!GO:0006099;tricarboxylic acid cycle;1.53724474031539e-06!GO:0046356;acetyl-CoA catabolic process;1.53724474031539e-06!GO:0048471;perinuclear region of cytoplasm;1.54648073210349e-06!GO:0016310;phosphorylation;1.57263131329734e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.57263131329734e-06!GO:0016881;acid-amino acid ligase activity;1.90618907183919e-06!GO:0022890;inorganic cation transmembrane transporter activity;1.9092745917539e-06!GO:0008134;transcription factor binding;2.26122806569526e-06!GO:0006897;endocytosis;2.27408513525893e-06!GO:0010324;membrane invagination;2.27408513525893e-06!GO:0008287;protein serine/threonine phosphatase complex;2.30878559344984e-06!GO:0009109;coenzyme catabolic process;2.71748867904043e-06!GO:0007010;cytoskeleton organization and biogenesis;2.80935373271629e-06!GO:0043285;biopolymer catabolic process;3.02778678129055e-06!GO:0030163;protein catabolic process;3.09295017235388e-06!GO:0032561;guanyl ribonucleotide binding;3.10596532909904e-06!GO:0019001;guanyl nucleotide binding;3.10596532909904e-06!GO:0006084;acetyl-CoA metabolic process;3.14786484664568e-06!GO:0032940;secretion by cell;3.14786484664568e-06!GO:0045259;proton-transporting ATP synthase complex;3.17866726669714e-06!GO:0048475;coated membrane;4.73034214760357e-06!GO:0030117;membrane coat;4.73034214760357e-06!GO:0006091;generation of precursor metabolites and energy;5.00081709874996e-06!GO:0003743;translation initiation factor activity;5.13167723258226e-06!GO:0005654;nucleoplasm;5.39973135411908e-06!GO:0005773;vacuole;5.6704081053594e-06!GO:0006446;regulation of translational initiation;6.93649105142294e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;7.14527771911696e-06!GO:0015399;primary active transmembrane transporter activity;7.14527771911696e-06!GO:0030036;actin cytoskeleton organization and biogenesis;7.62179215522118e-06!GO:0006082;organic acid metabolic process;1.06803405758696e-05!GO:0032559;adenyl ribonucleotide binding;1.18708390717568e-05!GO:0019752;carboxylic acid metabolic process;1.19773789804693e-05!GO:0044451;nucleoplasm part;1.3034681432829e-05!GO:0044255;cellular lipid metabolic process;1.36086641782722e-05!GO:0006752;group transfer coenzyme metabolic process;1.40012625306641e-05!GO:0030554;adenyl nucleotide binding;1.52449993289713e-05!GO:0006413;translational initiation;1.54225901683166e-05!GO:0006629;lipid metabolic process;1.60575227281623e-05!GO:0000398;nuclear mRNA splicing, via spliceosome;1.67454558244754e-05!GO:0000375;RNA splicing, via transesterification reactions;1.67454558244754e-05!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.67454558244754e-05!GO:0030425;dendrite;1.92406556458565e-05!GO:0006913;nucleocytoplasmic transport;2.06604348339231e-05!GO:0044440;endosomal part;2.1990708213908e-05!GO:0010008;endosome membrane;2.1990708213908e-05!GO:0008021;synaptic vesicle;2.23809870652567e-05!GO:0005770;late endosome;2.29233295125195e-05!GO:0043228;non-membrane-bound organelle;2.77913509703174e-05!GO:0043232;intracellular non-membrane-bound organelle;2.77913509703174e-05!GO:0051169;nuclear transport;2.8629691593e-05!GO:0005798;Golgi-associated vesicle;2.86797948537565e-05!GO:0031965;nuclear membrane;2.86797948537565e-05!GO:0051188;cofactor biosynthetic process;2.93725921507274e-05!GO:0043492;ATPase activity, coupled to movement of substances;3.20404788595353e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;3.40022914898787e-05!GO:0016491;oxidoreductase activity;3.84808546024802e-05!GO:0030029;actin filament-based process;3.99194629184222e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;4.25869492970034e-05!GO:0005769;early endosome;4.35186690010108e-05!GO:0003779;actin binding;4.59107701555974e-05!GO:0005524;ATP binding;4.66603410412355e-05!GO:0005635;nuclear envelope;4.72825009044467e-05!GO:0016740;transferase activity;5.32090530919004e-05!GO:0008654;phospholipid biosynthetic process;5.77139346900605e-05!GO:0016791;phosphoric monoester hydrolase activity;7.40743956145101e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.7042349536083e-05!GO:0000323;lytic vacuole;7.78116973447213e-05!GO:0005764;lysosome;7.78116973447213e-05!GO:0005741;mitochondrial outer membrane;8.28883599292658e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.3236295848619e-05!GO:0030120;vesicle coat;8.35454468631341e-05!GO:0030662;coated vesicle membrane;8.35454468631341e-05!GO:0008017;microtubule binding;8.53066487674239e-05!GO:0008610;lipid biosynthetic process;9.20271927843943e-05!GO:0005793;ER-Golgi intermediate compartment;9.24144037024055e-05!GO:0015980;energy derivation by oxidation of organic compounds;0.000102496426929731!GO:0007242;intracellular signaling cascade;0.000102496426929731!GO:0005634;nucleus;0.000108199015164868!GO:0044262;cellular carbohydrate metabolic process;0.000128378308417517!GO:0016126;sterol biosynthetic process;0.000128758629576894!GO:0032446;protein modification by small protein conjugation;0.00013925178277959!GO:0042623;ATPase activity, coupled;0.000155954944865311!GO:0031252;leading edge;0.000163292744179821!GO:0016567;protein ubiquitination;0.000164354883997816!GO:0019867;outer membrane;0.000168797188294365!GO:0046467;membrane lipid biosynthetic process;0.000168797188294365!GO:0031968;organelle outer membrane;0.000170156141057534!GO:0019226;transmission of nerve impulse;0.000187914029085959!GO:0017038;protein import;0.00021480094151972!GO:0016311;dephosphorylation;0.000223890424067526!GO:0007265;Ras protein signal transduction;0.000230550094357739!GO:0051128;regulation of cellular component organization and biogenesis;0.000289632368950602!GO:0051056;regulation of small GTPase mediated signal transduction;0.000299936088091356!GO:0030133;transport vesicle;0.00032264165069836!GO:0019899;enzyme binding;0.000344796155905704!GO:0006650;glycerophospholipid metabolic process;0.000400055785846285!GO:0016887;ATPase activity;0.000409669243823681!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000411679164793231!GO:0051246;regulation of protein metabolic process;0.000435188650260156!GO:0009108;coenzyme biosynthetic process;0.000447773095820598!GO:0004721;phosphoprotein phosphatase activity;0.000448451005140285!GO:0000151;ubiquitin ligase complex;0.000473148001569971!GO:0030426;growth cone;0.000498594834728375!GO:0006643;membrane lipid metabolic process;0.000569929706573796!GO:0006695;cholesterol biosynthetic process;0.000570909535853225!GO:0009117;nucleotide metabolic process;0.000596999242272861!GO:0008047;enzyme activator activity;0.000615620565783243!GO:0000902;cell morphogenesis;0.000658348827722435!GO:0032989;cellular structure morphogenesis;0.000658348827722435!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000663270581784553!GO:0005874;microtubule;0.000712659233920589!GO:0048523;negative regulation of cellular process;0.000795458234173961!GO:0006066;alcohol metabolic process;0.000805091152894692!GO:0045786;negative regulation of progression through cell cycle;0.000846227127338832!GO:0030427;site of polarized growth;0.000875481412930809!GO:0015630;microtubule cytoskeleton;0.000879314450289635!GO:0007019;microtubule depolymerization;0.000944252213647613!GO:0000159;protein phosphatase type 2A complex;0.000969991228962083!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00110963924768081!GO:0004722;protein serine/threonine phosphatase activity;0.00116237184394813!GO:0006470;protein amino acid dephosphorylation;0.0012076336616881!GO:0016301;kinase activity;0.00124836689560094!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00124836689560094!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00124836689560094!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00124836689560094!GO:0048699;generation of neurons;0.00125929549242447!GO:0030118;clathrin coat;0.00126116838600329!GO:0012506;vesicle membrane;0.00127236193955605!GO:0007269;neurotransmitter secretion;0.00131603442634748!GO:0022008;neurogenesis;0.00133589723347384!GO:0006888;ER to Golgi vesicle-mediated transport;0.00136199121574111!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00141625050118558!GO:0004812;aminoacyl-tRNA ligase activity;0.00141625050118558!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00141625050118558!GO:0043283;biopolymer metabolic process;0.00143581888661389!GO:0006613;cotranslational protein targeting to membrane;0.00150996009740567!GO:0048489;synaptic vesicle transport;0.00153149743819703!GO:0005085;guanyl-nucleotide exchange factor activity;0.00155097053073828!GO:0030027;lamellipodium;0.00157663228178189!GO:0044453;nuclear membrane part;0.00164156184931477!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00178548490374222!GO:0043623;cellular protein complex assembly;0.00184406093905385!GO:0030867;rough endoplasmic reticulum membrane;0.00188581690112217!GO:0005791;rough endoplasmic reticulum;0.00190985175925588!GO:0030424;axon;0.0019196715376232!GO:0005774;vacuolar membrane;0.00200232042142678!GO:0016604;nuclear body;0.00208115648140442!GO:0008154;actin polymerization and/or depolymerization;0.00208757738416163!GO:0050767;regulation of neurogenesis;0.00209073620187358!GO:0030182;neuron differentiation;0.00217985078421943!GO:0005730;nucleolus;0.00231560753079569!GO:0000245;spliceosome assembly;0.00233803259041627!GO:0019208;phosphatase regulator activity;0.00241723330882279!GO:0006414;translational elongation;0.0024718648972365!GO:0043038;amino acid activation;0.00268828718318295!GO:0006418;tRNA aminoacylation for protein translation;0.00268828718318295!GO:0043039;tRNA aminoacylation;0.00268828718318295!GO:0048487;beta-tubulin binding;0.00271830967221785!GO:0045055;regulated secretory pathway;0.00285138709813635!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0029396775109818!GO:0005096;GTPase activator activity;0.00305284808840913!GO:0016125;sterol metabolic process;0.00306436114260957!GO:0001505;regulation of neurotransmitter levels;0.00307406099769279!GO:0051920;peroxiredoxin activity;0.00307848007668964!GO:0031114;regulation of microtubule depolymerization;0.00310679822401361!GO:0007026;negative regulation of microtubule depolymerization;0.00310679822401361!GO:0044433;cytoplasmic vesicle part;0.00310679822401361!GO:0042578;phosphoric ester hydrolase activity;0.00323841530858831!GO:0005839;proteasome core complex (sensu Eukaryota);0.00342815624184031!GO:0003729;mRNA binding;0.00350531027872112!GO:0048519;negative regulation of biological process;0.0036351401633258!GO:0030532;small nuclear ribonucleoprotein complex;0.0036351401633258!GO:0005762;mitochondrial large ribosomal subunit;0.00386115976209553!GO:0000315;organellar large ribosomal subunit;0.00386115976209553!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00388042499377093!GO:0019318;hexose metabolic process;0.00407324968068663!GO:0051258;protein polymerization;0.00419532728999364!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00422386787810411!GO:0043209;myelin sheath;0.00422386787810411!GO:0004667;prostaglandin-D synthase activity;0.00422386787810411!GO:0050802;circadian sleep/wake cycle, sleep;0.00422386787810411!GO:0022410;circadian sleep/wake cycle process;0.00422386787810411!GO:0042749;regulation of circadian sleep/wake cycle;0.00422386787810411!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0043254035054545!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0043254035054545!GO:0005996;monosaccharide metabolic process;0.00457454985809256!GO:0005869;dynactin complex;0.00457454985809256!GO:0003712;transcription cofactor activity;0.00465967971393837!GO:0005048;signal sequence binding;0.00465967971393837!GO:0016607;nuclear speck;0.00466610284503553!GO:0007268;synaptic transmission;0.0047040379353186!GO:0005643;nuclear pore;0.00486843969002663!GO:0016050;vesicle organization and biogenesis;0.00504864466623053!GO:0009165;nucleotide biosynthetic process;0.00515236325297739!GO:0043284;biopolymer biosynthetic process;0.00518498910980846!GO:0030054;cell junction;0.00532986945478791!GO:0031072;heat shock protein binding;0.00549327739031604!GO:0006892;post-Golgi vesicle-mediated transport;0.0055622606153595!GO:0008601;protein phosphatase type 2A regulator activity;0.00556265224387922!GO:0007272;ensheathment of neurons;0.00567721036673639!GO:0008366;axon ensheathment;0.00567721036673639!GO:0005516;calmodulin binding;0.00579725454182094!GO:0046578;regulation of Ras protein signal transduction;0.00603070187694817!GO:0001578;microtubule bundle formation;0.00606255867639672!GO:0031902;late endosome membrane;0.00606461030344252!GO:0032787;monocarboxylic acid metabolic process;0.00611590613502505!GO:0007266;Rho protein signal transduction;0.00629989748918474!GO:0019888;protein phosphatase regulator activity;0.00647893184338547!GO:0032011;ARF protein signal transduction;0.00681921229406263!GO:0032012;regulation of ARF protein signal transduction;0.00681921229406263!GO:0044437;vacuolar part;0.00691331993615192!GO:0000314;organellar small ribosomal subunit;0.00693697085662568!GO:0005763;mitochondrial small ribosomal subunit;0.00693697085662568!GO:0006644;phospholipid metabolic process;0.0071028705560615!GO:0000096;sulfur amino acid metabolic process;0.00712336838881263!GO:0030384;phosphoinositide metabolic process;0.00719790765034597!GO:0006818;hydrogen transport;0.00721068841226687!GO:0030132;clathrin coat of coated pit;0.00740479319675111!GO:0006606;protein import into nucleus;0.00745392783527983!GO:0050811;GABA receptor binding;0.00759190200768743!GO:0048167;regulation of synaptic plasticity;0.00760325916671305!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00760325916671305!GO:0015002;heme-copper terminal oxidase activity;0.00760325916671305!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00760325916671305!GO:0004129;cytochrome-c oxidase activity;0.00760325916671305!GO:0005765;lysosomal membrane;0.00769320141763527!GO:0051287;NAD binding;0.00771507539100822!GO:0005975;carbohydrate metabolic process;0.00771507539100822!GO:0006665;sphingolipid metabolic process;0.00775093332693799!GO:0009966;regulation of signal transduction;0.0077893177955806!GO:0048037;cofactor binding;0.00786075582998733!GO:0051261;protein depolymerization;0.00787809067594506!GO:0051170;nuclear import;0.00798898415095456!GO:0030041;actin filament polymerization;0.0081696911451011!GO:0046474;glycerophospholipid biosynthetic process;0.00831734569965373!GO:0030659;cytoplasmic vesicle membrane;0.00834706616846162!GO:0051540;metal cluster binding;0.00844871481579395!GO:0051536;iron-sulfur cluster binding;0.00844871481579395!GO:0046488;phosphatidylinositol metabolic process;0.00845909863461242!GO:0016197;endosome transport;0.0085899282122558!GO:0031901;early endosome membrane;0.00887708558468758!GO:0019902;phosphatase binding;0.00887708558468758!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0088773084553004!GO:0003746;translation elongation factor activity;0.00916318301375686!GO:0005938;cell cortex;0.00925476668288865!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00941724959543843!GO:0042802;identical protein binding;0.00965546094960681!GO:0003714;transcription corepressor activity;0.00976107643650994!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0100742680195941!GO:0000062;acyl-CoA binding;0.0100742680195941!GO:0006612;protein targeting to membrane;0.0101656532064951!GO:0004298;threonine endopeptidase activity;0.0101656532064951!GO:0019843;rRNA binding;0.0102078849753792!GO:0006891;intra-Golgi vesicle-mediated transport;0.0105089350230058!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0105089350230058!GO:0055083;monovalent inorganic anion homeostasis;0.0105089350230058!GO:0055064;chloride ion homeostasis;0.0105089350230058!GO:0030644;cellular chloride ion homeostasis;0.0105089350230058!GO:0015992;proton transport;0.0107826566568517!GO:0004674;protein serine/threonine kinase activity;0.0108838367903154!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0108838367903154!GO:0000287;magnesium ion binding;0.0108932204162945!GO:0006631;fatty acid metabolic process;0.0109044244728158!GO:0048666;neuron development;0.0111216961386918!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.0113013224255084!GO:0019198;transmembrane receptor protein phosphatase activity;0.0113013224255084!GO:0008250;oligosaccharyl transferase complex;0.0115557694524542!GO:0006325;establishment and/or maintenance of chromatin architecture;0.0116389610021814!GO:0003697;single-stranded DNA binding;0.011692580579031!GO:0030660;Golgi-associated vesicle membrane;0.0117942800860967!GO:0006007;glucose catabolic process;0.0119399788833843!GO:0008203;cholesterol metabolic process;0.0119695641023417!GO:0051087;chaperone binding;0.0119695641023417!GO:0006672;ceramide metabolic process;0.012147722242165!GO:0043025;cell soma;0.0125017377617425!GO:0031301;integral to organelle membrane;0.012600647683573!GO:0030137;COPI-coated vesicle;0.0127286194894384!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0129613388976626!GO:0050803;regulation of synapse structure and activity;0.0134057608419623!GO:0065002;intracellular protein transport across a membrane;0.0135430223771132!GO:0001508;regulation of action potential;0.0136104959574965!GO:0006403;RNA localization;0.0137979762364955!GO:0008286;insulin receptor signaling pathway;0.0138877929019135!GO:0043681;protein import into mitochondrion;0.0141182209711665!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.014367535606877!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.0144355859945966!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0145986262754652!GO:0050662;coenzyme binding;0.0151068139162927!GO:0050657;nucleic acid transport;0.0151068139162927!GO:0051236;establishment of RNA localization;0.0151068139162927!GO:0050658;RNA transport;0.0151068139162927!GO:0043566;structure-specific DNA binding;0.0151721762061515!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.015802110332443!GO:0006096;glycolysis;0.0162581992546754!GO:0009066;aspartate family amino acid metabolic process;0.0162699733668771!GO:0003724;RNA helicase activity;0.0163122852343508!GO:0006006;glucose metabolic process;0.0164367616357645!GO:0008139;nuclear localization sequence binding;0.0164367616357645!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0165172946588545!GO:0007006;mitochondrial membrane organization and biogenesis;0.0165402556119539!GO:0005092;GDP-dissociation inhibitor activity;0.0167241438192851!GO:0046930;pore complex;0.0168601308536739!GO:0006519;amino acid and derivative metabolic process;0.0168631895316534!GO:0051659;maintenance of mitochondrion localization;0.0171653050598808!GO:0051657;maintenance of organelle localization;0.0171653050598808!GO:0046519;sphingoid metabolic process;0.017481199384701!GO:0007005;mitochondrion organization and biogenesis;0.0176365276170081!GO:0006595;polyamine metabolic process;0.0181712381038947!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0181716731310016!GO:0048667;neuron morphogenesis during differentiation;0.0184881877268905!GO:0048812;neurite morphogenesis;0.0184881877268905!GO:0051427;hormone receptor binding;0.0206045922923341!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0209302487995911!GO:0000904;cellular morphogenesis during differentiation;0.021890267362212!GO:0007158;neuron adhesion;0.021890267362212!GO:0005875;microtubule associated complex;0.022028372919873!GO:0031109;microtubule polymerization or depolymerization;0.022147817476558!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.022147817476558!GO:0019887;protein kinase regulator activity;0.0224341332090086!GO:0005885;Arp2/3 protein complex;0.0227533988885062!GO:0030658;transport vesicle membrane;0.0227533988885062!GO:0016568;chromatin modification;0.0228242836527603!GO:0031175;neurite development;0.0234219216595264!GO:0035035;histone acetyltransferase binding;0.0234219216595264!GO:0051248;negative regulation of protein metabolic process;0.0254743391728132!GO:0030742;GTP-dependent protein binding;0.0267498787591113!GO:0016564;transcription repressor activity;0.0267848670548189!GO:0030030;cell projection organization and biogenesis;0.0282253612330564!GO:0048858;cell projection morphogenesis;0.0282253612330564!GO:0032990;cell part morphogenesis;0.0282253612330564!GO:0019894;kinesin binding;0.0286644420279858!GO:0030176;integral to endoplasmic reticulum membrane;0.029201202140996!GO:0016579;protein deubiquitination;0.0293659561972185!GO:0007033;vacuole organization and biogenesis;0.0295566193095384!GO:0006916;anti-apoptosis;0.0298061450823975!GO:0050749;apolipoprotein E receptor binding;0.0300155838712416!GO:0004576;oligosaccharyl transferase activity;0.0301701485912748!GO:0006118;electron transport;0.0301701485912748!GO:0030145;manganese ion binding;0.030213241954167!GO:0043021;ribonucleoprotein binding;0.0303366422105345!GO:0008652;amino acid biosynthetic process;0.0305671435629151!GO:0048468;cell development;0.0305671435629151!GO:0008219;cell death;0.0305671435629151!GO:0016265;death;0.0305671435629151!GO:0050435;beta-amyloid metabolic process;0.0307617264115607!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0313412067962473!GO:0019903;protein phosphatase binding;0.0318704664806349!GO:0019207;kinase regulator activity;0.0321498658700916!GO:0004113;2',3'-cyclic-nucleotide 3'-phosphodiesterase activity;0.0321979414250907!GO:0009214;cyclic nucleotide catabolic process;0.0321979414250907!GO:0033116;ER-Golgi intermediate compartment membrane;0.032380398057628!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0326643104214978!GO:0006607;NLS-bearing substrate import into nucleus;0.0328104997636454!GO:0004680;casein kinase activity;0.0331827081702422!GO:0006323;DNA packaging;0.0331827081702422!GO:0043069;negative regulation of programmed cell death;0.0333671955190328!GO:0035257;nuclear hormone receptor binding;0.0333733176763101!GO:0008180;signalosome;0.0341017010171952!GO:0042552;myelination;0.0341468385609842!GO:0004683;calmodulin-dependent protein kinase activity;0.0341915852543093!GO:0019911;structural constituent of myelin sheath;0.0345987862280984!GO:0043254;regulation of protein complex assembly;0.0347144915717053!GO:0006633;fatty acid biosynthetic process;0.0355411318698925!GO:0008026;ATP-dependent helicase activity;0.0356423603619232!GO:0006778;porphyrin metabolic process;0.0356577000340355!GO:0033013;tetrapyrrole metabolic process;0.0356577000340355!GO:0043066;negative regulation of apoptosis;0.0356726984400476!GO:0031124;mRNA 3'-end processing;0.0358039556399837!GO:0030125;clathrin vesicle coat;0.0361324513831649!GO:0030665;clathrin coated vesicle membrane;0.0361324513831649!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0365732193137075!GO:0008361;regulation of cell size;0.0366252933033244!GO:0030911;TPR domain binding;0.0371626867361721!GO:0050839;cell adhesion molecule binding;0.0378502804012906!GO:0043488;regulation of mRNA stability;0.0379571639129026!GO:0043487;regulation of RNA stability;0.0379571639129026!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0379571639129026!GO:0010257;NADH dehydrogenase complex assembly;0.0379571639129026!GO:0033108;mitochondrial respiratory chain complex assembly;0.0379571639129026!GO:0005868;cytoplasmic dynein complex;0.0382724740261931!GO:0042176;regulation of protein catabolic process;0.0382724740261931!GO:0000097;sulfur amino acid biosynthetic process;0.0390586994238576!GO:0006790;sulfur metabolic process;0.0395540508053077!GO:0006402;mRNA catabolic process;0.0401634661279223!GO:0016829;lyase activity;0.0403722044906169!GO:0051168;nuclear export;0.0412171334477457!GO:0050178;phenylpyruvate tautomerase activity;0.0412171334477457!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0418614487856603!GO:0044438;microbody part;0.0420585334649309!GO:0044439;peroxisomal part;0.0420585334649309!GO:0046164;alcohol catabolic process;0.0429293655010929!GO:0008429;phosphatidylethanolamine binding;0.0433826429980276!GO:0007611;learning and/or memory;0.0436932294126105!GO:0044448;cell cortex part;0.0438851071016631!GO:0006520;amino acid metabolic process;0.0446818836013824!GO:0030139;endocytic vesicle;0.044772183946568!GO:0051252;regulation of RNA metabolic process;0.0455957153063549!GO:0031371;ubiquitin conjugating enzyme complex;0.0455957153063549!GO:0009308;amine metabolic process;0.0465230116594579!GO:0005100;Rho GTPase activator activity;0.0465495012256652!GO:0045454;cell redox homeostasis;0.0467554263699417!GO:0008088;axon cargo transport;0.047553336736827!GO:0046489;phosphoinositide biosynthetic process;0.0477037869941495!GO:0016049;cell growth;0.0480556006141085!GO:0030641;cellular hydrogen ion homeostasis;0.0491842130186903 | |||
|sample_id=10084 | |||
|sample_note= | |||
|sample_sex=male | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=brain | |||
|top_motifs=REST:4.3503546587;ZBTB6:3.82433215092;EGR1..3:3.70487202668;NHLH1,2:3.56479657339;TFAP2B:3.477414159;PAX5:3.36818481581;MTF1:3.34974381291;MYFfamily:3.11249709878;HIC1:3.09095010079;MED-1{core}:3.03743370246;ZFP161:3.03626490677;CUX2:2.95114010298;ZNF423:2.93427850358;MTE{core}:2.88836541787;AHR_ARNT_ARNT2:2.76992453976;HOXA9_MEIS1:2.7494335622;RREB1:2.61186013866;FOXM1:2.60205797683;NFIX:2.5552244865;GTF2I:2.4872091493;ATF2:2.47669292202;LMO2:2.44116316952;GCM1,2:2.36872753776;PAX6:2.26373078389;PATZ1:2.20236559689;RFX1:2.19601036613;PRRX1,2:2.09203583432;OCT4_SOX2{dimer}:2.06730339908;MZF1:2.06644230426;XBP1:2.03471790019;DBP:2.00683259992;SMAD1..7,9:1.98148895802;SOX5:1.98002841595;TFDP1:1.96602385506;RBPJ:1.92417059041;JUN:1.91613555331;GFI1B:1.89410455424;BREu{core}:1.81197271519;MAZ:1.77772169264;POU5F1:1.77685527796;EBF1:1.73007703462;SOX2:1.70893665957;POU6F1:1.69420929963;TFAP2{A,C}:1.67800847664;SOX{8,9,10}:1.6693952768;FOX{F1,F2,J1}:1.5986809424;GTF2A1,2:1.57295691108;ZNF384:1.55388537172;NANOG:1.49643105709;MYOD1:1.49611926582;PRDM1:1.47150709915;KLF4:1.43750002463;MAFB:1.32344913775;SOX17:1.29305770275;HOX{A4,D4}:1.26805982154;NFIL3:1.26544397214;ARID5B:1.20453301556;POU3F1..4:1.20095549868;RFX2..5_RFXANK_RFXAP:1.15783308763;TGIF1:1.14940736165;EP300:1.14048154771;SP1:1.1099788051;FOXP1:1.07208385603;RORA:1.0452107451;LEF1_TCF7_TCF7L1,2:1.0320304283;bHLH_family:0.930432056132;HNF1A:0.905139493333;GATA4:0.903185352335;ZEB1:0.890727734752;FOXQ1:0.869398134967;ZIC1..3:0.859425455885;ESRRA:0.858942891467;HMGA1,2:0.857240584418;LHX3,4:0.817572163191;CREB1:0.80876202093;NRF1:0.78630132123;NKX3-2:0.784653870994;HAND1,2:0.784634470647;ONECUT1,2:0.729482223414;HNF4A_NR2F1,2:0.728852477359;HOX{A6,A7,B6,B7}:0.727643026458;YY1:0.714941039414;SPZ1:0.66978500711;NR3C1:0.665754854362;NKX2-3_NKX2-5:0.660149142063;XCPE1{core}:0.639513846823;SREBF1,2:0.548753318896;MEF2{A,B,C,D}:0.500435680284;ZNF143:0.463547611718;CDC5L:0.435271399588;FOX{D1,D2}:0.418554224321;ESR1:0.418354065753;GZF1:0.409569948191;IKZF2:0.389352272173;TLX1..3_NFIC{dimer}:0.380274676884;NKX6-1,2:0.377299175391;NFE2L1:0.361715046396;ZNF238:0.320165950198;AR:0.314236921261;ATF4:0.303759021722;FOXL1:0.289594486991;CRX:0.274156700622;ADNP_IRX_SIX_ZHX:0.239742549265;MYBL2:0.130967980867;RXR{A,B,G}:0.126660142185;TBX4,5:0.117060620596;UFEwm:0.064321931259;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.030800907528;TOPORS:0.00910113744791;NR5A1,2:0.00868760378158;GFI1:-0.0232663857601;ATF5_CREB3:-0.0339917646823;STAT1,3:-0.0340933767413;TFCP2:-0.0377939722767;PAX2:-0.0441796666633;STAT2,4,6:-0.116965239874;CEBPA,B_DDIT3:-0.183131465402;SNAI1..3:-0.185071442863;PITX1..3:-0.191106589706;ZNF148:-0.199883735344;TLX2:-0.204137410799;TFAP4:-0.216238184205;IKZF1:-0.221625778963;NFE2L2:-0.223293311658;NFY{A,B,C}:-0.235839561631;VSX1,2:-0.289623658623;PBX1:-0.300518724296;NR1H4:-0.353295167916;HBP1_HMGB_SSRP1_UBTF:-0.390656717492;BPTF:-0.412517828879;HMX1:-0.459237776148;PDX1:-0.47253643629;FOXD3:-0.508567122764;PAX1,9:-0.529123330767;GATA6:-0.540011435862;NANOG{mouse}:-0.565164344479;PAX3,7:-0.583123291139;SPI1:-0.589317104768;POU1F1:-0.599526698249;FOXA2:-0.612019954085;GLI1..3:-0.626481527559;ATF6:-0.64666937057;IRF7:-0.681285144033;NFE2:-0.691516283336;TBP:-0.740397882313;IRF1,2:-0.776183740694;TEF:-0.777697776275;TP53:-0.834014293664;RUNX1..3:-0.920520157715;SPIB:-0.926283802569;PAX4:-0.926653027569;ETS1,2:-0.936309870385;TAL1_TCF{3,4,12}:-0.950878324716;FOXN1:-0.96627618091;DMAP1_NCOR{1,2}_SMARC:-1.00159701622;FOXP3:-1.03000956639;BACH2:-1.06230090962;T:-1.0832639331;ALX4:-1.08737776685;PPARG:-1.09919088014;TEAD1:-1.11361047507;FOS_FOS{B,L1}_JUN{B,D}:-1.1364686916;FOSL2:-1.151939988;RXRA_VDR{dimer}:-1.1555125867;FOXO1,3,4:-1.1595684668;HSF1,2:-1.17933999065;NFKB1_REL_RELA:-1.21707131548;HLF:-1.22363458135;FOX{I1,J2}:-1.25039529392;SRF:-1.27867400511;PAX8:-1.31325380022;STAT5{A,B}:-1.39110511132;ALX1:-1.39988030624;HES1:-1.41928809784;E2F1..5:-1.44906149538;NFATC1..3:-1.488518604;POU2F1..3:-1.50831263917;HIF1A:-1.52413088808;EVI1:-1.61651347443;NR6A1:-1.64546565762;NKX2-1,4:-1.66273511123;ELK1,4_GABP{A,B1}:-1.67860536426;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.71217664291;NKX2-2,8:-1.75252333523;AIRE:-2.04104992671;MYB:-2.06475116095;EN1,2:-2.09836902825;ELF1,2,4:-2.10977355278;ZBTB16:-2.28156995797;CDX1,2,4:-2.32990322285;NKX3-1:-2.37053267203;HOX{A5,B5}:-2.56847072626 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10084-102B3;search_select_hide=table117:FF:10084-102B3 | |||
}} | }} |
Latest revision as of 12:20, 3 June 2020
Name: | brain, adult, donor1 |
---|---|
Species: | Human (Homo sapiens) |
Library ID: | CNhs11796 |
Sample type: | tissues |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11796
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11796
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0371 |
10 | 10 | 0.0171 |
100 | 100 | 0.35 |
101 | 101 | 0.866 |
102 | 102 | 0.669 |
103 | 103 | 0.0894 |
104 | 104 | 0.173 |
105 | 105 | 0.356 |
106 | 106 | 0.148 |
107 | 107 | 0.192 |
108 | 108 | 0.887 |
109 | 109 | 0.00905 |
11 | 11 | 0.0223 |
110 | 110 | 0.0273 |
111 | 111 | 0.158 |
112 | 112 | 0.443 |
113 | 113 | 0.535 |
114 | 114 | 0.106 |
115 | 115 | 0.654 |
116 | 116 | 0.382 |
117 | 117 | 0.00522 |
118 | 118 | 0.107 |
119 | 119 | 0.405 |
12 | 12 | 0.719 |
120 | 120 | 0.139 |
121 | 121 | 0.612 |
122 | 122 | 0.509 |
123 | 123 | 0.854 |
124 | 124 | 0.0284 |
125 | 125 | 0.325 |
126 | 126 | 0.0163 |
127 | 127 | 0.371 |
128 | 128 | 0.391 |
129 | 129 | 0.881 |
13 | 13 | 4.29961e-4 |
130 | 130 | 0.282 |
131 | 131 | 0.155 |
132 | 132 | 0.316 |
133 | 133 | 0.00461 |
134 | 134 | 0.605 |
135 | 135 | 0.265 |
136 | 136 | 0.00794 |
137 | 137 | 0.359 |
138 | 138 | 0.821 |
139 | 139 | 0.17 |
14 | 14 | 0.93 |
140 | 140 | 0.375 |
141 | 141 | 0.302 |
142 | 142 | 0.898 |
143 | 143 | 0.0086 |
144 | 144 | 0.964 |
145 | 145 | 0.12 |
146 | 146 | 0.386 |
147 | 147 | 0.851 |
148 | 148 | 0.187 |
149 | 149 | 0.736 |
15 | 15 | 0.0475 |
150 | 150 | 0.136 |
151 | 151 | 0.767 |
152 | 152 | 0.227 |
153 | 153 | 0.499 |
154 | 154 | 0.499 |
155 | 155 | 0.483 |
156 | 156 | 0.893 |
157 | 157 | 0.264 |
158 | 158 | 0.395 |
159 | 159 | 0.435 |
16 | 16 | 0.0675 |
160 | 160 | 0.269 |
161 | 161 | 0.188 |
162 | 162 | 0.889 |
163 | 163 | 0.738 |
164 | 164 | 0.0155 |
165 | 165 | 0.0534 |
166 | 166 | 0.988 |
167 | 167 | 0.344 |
168 | 168 | 0.631 |
169 | 169 | 0.0131 |
17 | 17 | 0.192 |
18 | 18 | 0.168 |
19 | 19 | 0.343 |
2 | 2 | 0.777 |
20 | 20 | 0.0709 |
21 | 21 | 0.0781 |
22 | 22 | 0.316 |
23 | 23 | 0.503 |
24 | 24 | 0.05 |
25 | 25 | 0.311 |
26 | 26 | 5.47113e-5 |
27 | 27 | 0.924 |
28 | 28 | 0.551 |
29 | 29 | 0.00338 |
3 | 3 | 0.0106 |
30 | 30 | 0.512 |
31 | 31 | 0.926 |
32 | 32 | 0.079 |
33 | 33 | 0.0473 |
34 | 34 | 0.962 |
35 | 35 | 0.565 |
36 | 36 | 0.121 |
37 | 37 | 0.0441 |
38 | 38 | 0.364 |
39 | 39 | 0.309 |
4 | 4 | 0.914 |
40 | 40 | 0.095 |
41 | 41 | 0.313 |
42 | 42 | 0.0937 |
43 | 43 | 0.0968 |
44 | 44 | 0.471 |
45 | 45 | 0.895 |
46 | 46 | 0.069 |
47 | 47 | 0.0878 |
48 | 48 | 0.0606 |
49 | 49 | 0.183 |
5 | 5 | 0.361 |
50 | 50 | 0.325 |
51 | 51 | 0.531 |
52 | 52 | 0.878 |
53 | 53 | 0.67 |
54 | 54 | 0.567 |
55 | 55 | 0.444 |
56 | 56 | 0.54 |
57 | 57 | 0.231 |
58 | 58 | 0.293 |
59 | 59 | 0.245 |
6 | 6 | 0.524 |
60 | 60 | 0.0993 |
61 | 61 | 0.0443 |
62 | 62 | 0.164 |
63 | 63 | 0.225 |
64 | 64 | 0.247 |
65 | 65 | 0.443 |
66 | 66 | 0.115 |
67 | 67 | 0.297 |
68 | 68 | 0.583 |
69 | 69 | 0.689 |
7 | 7 | 0.0267 |
70 | 70 | 0.0355 |
71 | 71 | 0.00431 |
72 | 72 | 0.299 |
73 | 73 | 0.0621 |
74 | 74 | 0.517 |
75 | 75 | 0.0201 |
76 | 76 | 0.244 |
77 | 77 | 0.432 |
78 | 78 | 0.00174 |
79 | 79 | 0.457 |
8 | 8 | 0.0964 |
80 | 80 | 0.611 |
81 | 81 | 0.578 |
82 | 82 | 0.566 |
83 | 83 | 0.0681 |
84 | 84 | 0.744 |
85 | 85 | 0.542 |
86 | 86 | 0.172 |
87 | 87 | 0.0191 |
88 | 88 | 0.892 |
89 | 89 | 0.63 |
9 | 9 | 0.461 |
90 | 90 | 0.0207 |
91 | 91 | 0.391 |
92 | 92 | 0.555 |
93 | 93 | 0.841 |
94 | 94 | 0.05 |
95 | 95 | 0.0212 |
96 | 96 | 0.942 |
97 | 97 | 0.73 |
98 | 98 | 0.316 |
99 | 99 | 0.941 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11796
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010012 human brain - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010012 (human brain - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006238 (future brain)
UBERON:0010316 (germ layer / neural crest)