FF:10061-101H7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004925 | ||
|accession_numbers=CAGE;DRX008744;DRR009616;DRZ001041;DRZ002426;DRZ012391;DRZ013776 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000341,UBERON:0000974,UBERON:0000479,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0001062,UBERON:0000153,UBERON:0007811 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010061 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/throat%252c%2520fetal%252c%2520donor1.CNhs11770.10061-101H7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10061-101H7 | |id=FF:10061-101H7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010061 | ||
|is_obsolete= | |||
|library_id=CNhs11770 | |||
|library_id_phase_based=2:CNhs11770 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10061 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10061 | |||
|name=throat, fetal, donor1 | |name=throat, fetal, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11770,LSID820,release009,COMPLETED | |profile_hcage=CNhs11770,LSID820,release009,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.0463716234329315,0,0,0.98092643819162,0,-0.160318030086386,0.092743246865863,-0.0433023403039134,0.633067421888761,0,0,0,0.092743246865863,0,0,0,0,0,0.092743246865863,0,0,0,0.272610600234812,0,0,0,0.084562136065824,0.169124272131648,0.644234776123826,0,0,0.609236082613022,0,0,0,0,0,0,0.0463716234329315,0,0,0,0.092743246865863,0,-0.00826525205369142,0.292285921270514,0,0,0,0,0,0,0,0.0685282257530287,0,0.092743246865863,0,0.234059791889601,0.234059791889601,0.177107097529025,0.169124272131648,0.432007118805573,0,0,-0.00460038034723392,0.169124272131648,0,0,0,0,0,0,0,0.092743246865863,0,0,0.0463716234329315,0,0,0,0,0.092743246865863,0.0873005880844235,0,0,0.169124272131648,0.0452073821653649,0,0.155406142068504,0.207947983806595,0.424195758476827,0,0.092743246865863,0.0427137397762714,0.0660236462376105,0,0.092743246865863,0.084562136065824,0,0.242472645271862,0.329227601413012,0,0,0,0,0,0,0.169124272131648,0,0,0,0,0,0,0,0,0.092743246865863,0,0.182903221111705,0.092743246865863,0,0,-0.0266094859650764,-0.306307393518869,0.169124272131648,0,0.169124272131648,0,0,0 | |||
|repeat_enrich_byname=0.092743246865863,0.290537150179147,0,0,0.242472645271862,0.169124272131648,0,0,0.169124272131648,0,0.463073691218343,0.385317825735311,0.169124272131648,0.092743246865863,0,0,0.47587924494715,0.1170298959448,0.248971901480706,-0.143515142523472,0.0463716234329315,0,-0.013803090937939,0,0.234059791889601,0,0,0.169124272131648,0.092743246865863,0.169124272131648,0,0,-0.0353766200867017,0,0.478586928458864,0.130933759498755,0,0.0978719862819789,0,0.130933759498755,0.253081399169925,0,0.0387087441421101,0.222192889101779,0,0.0377050659862884,0.092743246865863,0.169124272131648,0.0394481394781312,0,0.169657666385407,0.0864041038082304,0.758977949681526,0.351542227871877,-0.04680465889238,0,0,0,0.028638183717475,0.0229626847331912,0,0,0.287988463361789,0.385692803935312,0,0,1.65885571469445,0.340507996509568,0.079554354573893,0.0602148545632375,0,0.165481985825432,0,0,0,0,0,0,0,0.092743246865863,0.169124272131648,0,0,0.428277495109966,0.415204075712915,0,0.092743246865863,0.092743246865863,0.0188284286413477,0.200089410389412,0.169124272131648,0.121230523977704,0.308771411955583,-0.0208757274323506,0.100310790224949,0.356676644290124,0.092743246865863,0.608337794245353,0.202470161996028,0.37158506626997,0.0326542125185664,0.237915976364172,0.339017760498331,0.092743246865863,0.302231760423373,0.33236523819461,0.037131483062211,-0.105479474700922,0.129307722152741,0.259898802371095,0.149245994315611,0.092743246865863,0.290537150179147,0.156550865410298,0.182100011261945,0.092743246865863,0,0.501482744150593,0.0363290414458261,0.277390494679778,0.119743636047774,0.044394980306406,-0.207957649965757,0.766992144155886,0.284756219495289,0.16864969388107,0.91478562672679,0.092743246865863,0.660008035750531,0.15035941572625,0.0759857428628788,0.282752306705263,-0.0572725431103474,0.0657639799364566,0.451432142616835,-0.0683442610773682,0.163401519377732,0.102877124826969,0.143962922157939,0.169124272131648,0.234059791889601,0.248174761071851,0,0.092743246865863,-0.0469220936693376,0.0953505156541719,0.660008035750531,-0.023167096800903,-0.0422058169329269,0.107652434954023,0.0826984827136032,0.0322554324268408,0.0292676689251422,0.154721590769764,0.142308572640172,0.0792992092106803,0.0506115722574381,0.230925327686886,0.18072433269376,0.092743246865863,-0.0843810761409499,0.145423579480036,0.117354764978151,-0.0370769796564269,0.0342964200540378,0.204937670652084,0.342260861212097,0.0427137397762714,0.279724549022359,0.352733844957258,0.933995290620334,0.170640486332864,0.138577372577242,0.469522075760303,0.050638852730045,0.194232319245119,0,0.266675203396216,0.234059791889601,0.235580054663507,0,0.170675382295552,0.220085881601128,0.801919444574993,-0.097138837726031,0.092743246865863,0.40251192182672,0.49274088716295,0.092743246865863,0.0980992904090674,0.133731941544681,0.234059791889601,0.486411787154956,0.272290635398959,0.707917430195365,0.154122592384552,0,0.260561354572766,0,0.290537150179147,-0.0212674771947636,0.323077592303943,0,0.0149819085923508,0.00303376919654652,0.0778415267168553,0.0531531986967137,0,0,0.252139368790155,0,0.586224098127494,1.03840870656949,0.211593702201535,0.51431134490252,0.172607269096484,0.130933759498755,0.90150479732181,0.0878427555327473,0.169124272131648,0.056532025924425,0.340507996509568,0.0498201034998545,0.0133606160445328,0,0.0432307524649235,0,0.092743246865863,0.192658912867655,0.385317825735311,0.156255063554951,0.148987436419119,0.0777640217561144,0,0,0.13713212115012,0,0.206502587993951,0.683389006398901,0.0711002803667918,0.340507996509568,-0.311605627965514,0,0.234059791889601,0,0.463073691218343,0,0.0801458003309692,0.148644296378162,0.463073691218343,-0.128563187803921,0.376269272331354,0.0461068564552274,0.0463716234329315,0,0,0.092743246865863,0.018336389336126,0.0873005880844235,0.092743246865863,0.037261565634016,0.234059791889601,0,0.092743246865863,0,0.411145336308028,0,0,0.192658912867655,0,0.035012789812199,0.0311041805270625,0,0,0.0463716234329315,0.658455202826025,0,0,0,0.167320489859467,0.089444177835484,0,0,-0.13464384728914,0,-0.0265604456014898,0.0111613673190216,0,0.0243942897836415,-0.635211798817269,0.285085644675732,0,0.092743246865863,0.549924963588951,0,0,0.0747538333779505,0,0,0.0718184709197461,0,0,0.0463716234329315,0,0.103007563836394,0,0.755672089511786,0,0,0.092743246865863,0,0.092743246865863,0.234059791889601,0.497286326097239,0.092743246865863,0,0,0,-0.100078071577045,0.000519190207352624,0,0,0,0,0.84208544842815,0,0,0.177486008931721,0.155501958047224,0,0,0.0359012671863201,0,0,0.092743246865863,0,0.057009244831538,0.306678481170471,0,0,0,0.092743246865863,0,0.432007118805573,0,0.092743246865863,0,0.092743246865863,0.88081701804221,0,0,-0.0433023403039134,0,0.0104540917974564,0,0,0,0,0.0128642678854495,0.0360389826572089,0,0,0,0,0.0212069860335352,-0.123319086035448,-0.341735856072622,0,0.169124272131648,0,0,0,0.092743246865863,0.0298279625436886,0.361945572283505,0,0.385317825735311,0.0323269194660017,0,0.0552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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:RtHFN: Throat | |rna_catalog_number=Cat:RtHFN: Throat | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity=A? | |sample_ethnicity=A? | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.17517053609418e-206!GO:0005737;cytoplasm;5.33829155383744e-177!GO:0043226;organelle;4.62080236876523e-154!GO:0043229;intracellular organelle;7.30117006593619e-154!GO:0043231;intracellular membrane-bound organelle;9.14706441537376e-128!GO:0043227;membrane-bound organelle;1.16059379694133e-127!GO:0044444;cytoplasmic part;6.79299609393003e-110!GO:0044422;organelle part;5.39971412856251e-109!GO:0044446;intracellular organelle part;1.13615165119725e-107!GO:0005515;protein binding;7.44172739705642e-102!GO:0032991;macromolecular complex;3.77765234816526e-83!GO:0016043;cellular component organization and biogenesis;2.68995820683151e-53!GO:0030529;ribonucleoprotein complex;1.1851798737288e-51!GO:0043170;macromolecule metabolic process;2.03860503365183e-50!GO:0043233;organelle lumen;2.44605373968669e-49!GO:0031974;membrane-enclosed lumen;2.44605373968669e-49!GO:0005634;nucleus;1.20906052638488e-48!GO:0044238;primary metabolic process;1.68802909245983e-48!GO:0043234;protein complex;2.2094562864546e-48!GO:0044428;nuclear part;2.49712070015193e-46!GO:0044237;cellular metabolic process;3.08142750183798e-46!GO:0003723;RNA binding;5.35656365119964e-44!GO:0005739;mitochondrion;2.03311784643407e-42!GO:0043228;non-membrane-bound organelle;9.90343114543296e-41!GO:0043232;intracellular non-membrane-bound organelle;9.90343114543296e-41!GO:0019538;protein metabolic process;6.77754281576024e-38!GO:0031090;organelle membrane;6.30536540208034e-35!GO:0033036;macromolecule localization;2.16337803465769e-33!GO:0015031;protein transport;8.35550487296567e-33!GO:0005840;ribosome;5.62758578626112e-32!GO:0044429;mitochondrial part;9.17627727046315e-32!GO:0044260;cellular macromolecule metabolic process;2.14672745874148e-31!GO:0031967;organelle envelope;6.15638853261656e-31!GO:0031975;envelope;8.35147510593775e-31!GO:0008104;protein localization;1.2864508474929e-30!GO:0044267;cellular protein metabolic process;1.50617802397292e-30!GO:0045184;establishment of protein localization;2.88876802956431e-30!GO:0022607;cellular component assembly;3.37276242794397e-30!GO:0065003;macromolecular complex assembly;4.96653403179693e-30!GO:0006996;organelle organization and biogenesis;8.81851187664294e-30!GO:0046907;intracellular transport;8.97710763186596e-30!GO:0043283;biopolymer metabolic process;5.5570630952737e-29!GO:0016071;mRNA metabolic process;3.14257130379674e-28!GO:0003735;structural constituent of ribosome;1.18145222735124e-27!GO:0008380;RNA splicing;5.61839891309656e-27!GO:0006412;translation;7.90031225574873e-27!GO:0031981;nuclear lumen;7.90031225574873e-27!GO:0005829;cytosol;3.42975349431176e-26!GO:0006396;RNA processing;1.07078356720401e-25!GO:0033279;ribosomal subunit;6.50844762765913e-25!GO:0010467;gene expression;1.87952260095912e-23!GO:0006397;mRNA processing;2.32509670577513e-23!GO:0006886;intracellular protein transport;3.51419485673968e-23!GO:0019866;organelle inner membrane;5.09710317551417e-22!GO:0008092;cytoskeletal protein binding;2.19528984045108e-21!GO:0009059;macromolecule biosynthetic process;6.686405150522e-21!GO:0005740;mitochondrial envelope;8.47314465979968e-21!GO:0031966;mitochondrial membrane;1.16427580115999e-20!GO:0005743;mitochondrial inner membrane;5.38397241611904e-20!GO:0005654;nucleoplasm;1.45470386822172e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.17708747905662e-19!GO:0006119;oxidative phosphorylation;2.63781987363886e-19!GO:0051641;cellular localization;1.18660427028619e-18!GO:0051649;establishment of cellular localization;1.60184849713197e-18!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.4746233638189e-18!GO:0005681;spliceosome;3.23492017539493e-18!GO:0044455;mitochondrial membrane part;6.8019382936246e-18!GO:0008134;transcription factor binding;8.30788130456459e-18!GO:0044445;cytosolic part;6.77206647172749e-17!GO:0009058;biosynthetic process;7.54043739980504e-17!GO:0005746;mitochondrial respiratory chain;7.90231452569318e-17!GO:0044249;cellular biosynthetic process;1.83140147232544e-16!GO:0015629;actin cytoskeleton;3.50531260567155e-16!GO:0044451;nucleoplasm part;8.04062575690433e-16!GO:0000166;nucleotide binding;3.34901315650896e-15!GO:0050136;NADH dehydrogenase (quinone) activity;3.62307855121114e-15!GO:0003954;NADH dehydrogenase activity;3.62307855121114e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.62307855121114e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.89533155583551e-15!GO:0006259;DNA metabolic process;1.37867643810793e-14!GO:0031980;mitochondrial lumen;4.59969889415816e-14!GO:0005759;mitochondrial matrix;4.59969889415816e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.60397749335134e-14!GO:0048770;pigment granule;5.80710803144766e-14!GO:0042470;melanosome;5.80710803144766e-14!GO:0005783;endoplasmic reticulum;6.53381285599954e-14!GO:0005794;Golgi apparatus;7.05658713487395e-14!GO:0012505;endomembrane system;1.03699569820279e-13!GO:0016192;vesicle-mediated transport;2.20208679345997e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;2.22234051719331e-13!GO:0044449;contractile fiber part;2.36895244351999e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.48943046632773e-13!GO:0019941;modification-dependent protein catabolic process;4.05668655169787e-13!GO:0043632;modification-dependent macromolecule catabolic process;4.05668655169787e-13!GO:0015934;large ribosomal subunit;4.25312096016566e-13!GO:0006457;protein folding;5.16894388258796e-13!GO:0006512;ubiquitin cycle;5.88724864014154e-13!GO:0030964;NADH dehydrogenase complex (quinone);5.88724864014154e-13!GO:0045271;respiratory chain complex I;5.88724864014154e-13!GO:0005747;mitochondrial respiratory chain complex I;5.88724864014154e-13!GO:0044257;cellular protein catabolic process;7.63647129271841e-13!GO:0015935;small ribosomal subunit;8.17624441044437e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.43513676550315e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.19467266671061e-12!GO:0042773;ATP synthesis coupled electron transport;1.19467266671061e-12!GO:0006461;protein complex assembly;1.65503954257469e-12!GO:0022618;protein-RNA complex assembly;1.70873592232201e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.77938055104196e-12!GO:0003779;actin binding;1.82732783479673e-12!GO:0048193;Golgi vesicle transport;1.86192456524392e-12!GO:0043292;contractile fiber;1.98652217040525e-12!GO:0005856;cytoskeleton;2.02460927339359e-12!GO:0043412;biopolymer modification;2.28534708481865e-12!GO:0048523;negative regulation of cellular process;6.63200596084273e-12!GO:0006366;transcription from RNA polymerase II promoter;7.30512069296502e-12!GO:0007010;cytoskeleton organization and biogenesis;8.80708271558164e-12!GO:0006605;protein targeting;1.18166446738692e-11!GO:0006464;protein modification process;1.33280636824401e-11!GO:0008307;structural constituent of muscle;1.81333842129075e-11!GO:0044265;cellular macromolecule catabolic process;1.97917612391629e-11!GO:0003676;nucleic acid binding;2.26691372675976e-11!GO:0030036;actin cytoskeleton organization and biogenesis;2.73988211536267e-11!GO:0030029;actin filament-based process;3.28073763897311e-11!GO:0003712;transcription cofactor activity;5.60817737685156e-11!GO:0016462;pyrophosphatase activity;5.94535622654938e-11!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.10012528987819e-11!GO:0005635;nuclear envelope;7.4781354816612e-11!GO:0030163;protein catabolic process;7.95410480600743e-11!GO:0043687;post-translational protein modification;8.5753365651637e-11!GO:0016817;hydrolase activity, acting on acid anhydrides;9.01367210434533e-11!GO:0031965;nuclear membrane;1.01281904477124e-10!GO:0017111;nucleoside-triphosphatase activity;1.46307369610201e-10!GO:0016874;ligase activity;2.41377543711574e-10!GO:0008135;translation factor activity, nucleic acid binding;2.61038733757916e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.61935223955701e-10!GO:0030016;myofibril;2.93427227816581e-10!GO:0007049;cell cycle;2.97971343349076e-10!GO:0016070;RNA metabolic process;3.63919450544318e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.53523332266569e-10!GO:0000502;proteasome complex (sensu Eukaryota);4.61878683281497e-10!GO:0032553;ribonucleotide binding;5.49179157355399e-10!GO:0032555;purine ribonucleotide binding;5.49179157355399e-10!GO:0043285;biopolymer catabolic process;7.70040300188152e-10!GO:0005761;mitochondrial ribosome;8.73232766802118e-10!GO:0000313;organellar ribosome;8.73232766802118e-10!GO:0008565;protein transporter activity;1.03719764547166e-09!GO:0006913;nucleocytoplasmic transport;1.21246705930552e-09!GO:0006323;DNA packaging;1.29986358664148e-09!GO:0051276;chromosome organization and biogenesis;1.38884791598881e-09!GO:0051082;unfolded protein binding;1.39229964970653e-09!GO:0048519;negative regulation of biological process;1.49494544759748e-09!GO:0017076;purine nucleotide binding;1.67852332327444e-09!GO:0044432;endoplasmic reticulum part;1.87555732027164e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;2.20208629765659e-09!GO:0000375;RNA splicing, via transesterification reactions;2.20208629765659e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.20208629765659e-09!GO:0050794;regulation of cellular process;2.30905276440691e-09!GO:0051169;nuclear transport;2.88369183124225e-09!GO:0050789;regulation of biological process;4.63463605442651e-09!GO:0007517;muscle development;5.07848450078333e-09!GO:0030017;sarcomere;5.54496977541178e-09!GO:0005793;ER-Golgi intermediate compartment;5.79960513804483e-09!GO:0044420;extracellular matrix part;7.52406948024137e-09!GO:0006446;regulation of translational initiation;9.36090920484586e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.7279303530176e-09!GO:0009057;macromolecule catabolic process;1.00865655147795e-08!GO:0005788;endoplasmic reticulum lumen;1.01884607312613e-08!GO:0008639;small protein conjugating enzyme activity;1.13752112778516e-08!GO:0004842;ubiquitin-protein ligase activity;1.34371971278876e-08!GO:0051186;cofactor metabolic process;1.75973425676031e-08!GO:0016604;nuclear body;2.16709970873785e-08!GO:0016564;transcription repressor activity;2.6757615688108e-08!GO:0019829;cation-transporting ATPase activity;2.85351567693012e-08!GO:0005524;ATP binding;2.89289539384735e-08!GO:0032559;adenyl ribonucleotide binding;3.99189348526736e-08!GO:0005581;collagen;7.26930265456854e-08!GO:0016481;negative regulation of transcription;7.83523641521383e-08!GO:0019787;small conjugating protein ligase activity;8.01207585993389e-08!GO:0045333;cellular respiration;8.12267783997162e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.86738482509849e-08!GO:0044248;cellular catabolic process;1.06250143700323e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.12493178818301e-07!GO:0006793;phosphorus metabolic process;1.14728733038684e-07!GO:0006796;phosphate metabolic process;1.14728733038684e-07!GO:0006413;translational initiation;1.3000038464333e-07!GO:0016607;nuclear speck;1.53366359243227e-07!GO:0030554;adenyl nucleotide binding;1.54086720246668e-07!GO:0015630;microtubule cytoskeleton;1.60922943566751e-07!GO:0003743;translation initiation factor activity;1.65363304179037e-07!GO:0044453;nuclear membrane part;1.79387400224157e-07!GO:0017038;protein import;2.3254810126252e-07!GO:0031252;leading edge;2.70208536470436e-07!GO:0009060;aerobic respiration;2.77823529677262e-07!GO:0030120;vesicle coat;3.51472297470578e-07!GO:0030662;coated vesicle membrane;3.51472297470578e-07!GO:0016887;ATPase activity;3.64048803896958e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.85661174565099e-07!GO:0031324;negative regulation of cellular metabolic process;4.2311646097784e-07!GO:0022402;cell cycle process;5.46953299912033e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.70727790962597e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.77601491324972e-07!GO:0009055;electron carrier activity;7.14011530604327e-07!GO:0009892;negative regulation of metabolic process;7.70616728305442e-07!GO:0031982;vesicle;7.75809041941932e-07!GO:0012501;programmed cell death;8.94718551575353e-07!GO:0005730;nucleolus;9.594898416347e-07!GO:0031410;cytoplasmic vesicle;1.11720594767853e-06!GO:0006915;apoptosis;1.18335998114501e-06!GO:0048475;coated membrane;1.62129596366579e-06!GO:0030117;membrane coat;1.62129596366579e-06!GO:0006333;chromatin assembly or disassembly;1.69589209267193e-06!GO:0031988;membrane-bound vesicle;1.87663406353003e-06!GO:0000151;ubiquitin ligase complex;1.95717753966772e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.30073838503794e-06!GO:0016310;phosphorylation;2.41207545062146e-06!GO:0044431;Golgi apparatus part;2.64762085233572e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.67406288046799e-06!GO:0006099;tricarboxylic acid cycle;3.25426760714613e-06!GO:0046356;acetyl-CoA catabolic process;3.25426760714613e-06!GO:0009150;purine ribonucleotide metabolic process;3.67611603237905e-06!GO:0015986;ATP synthesis coupled proton transport;3.75086901957991e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.75086901957991e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.79799517286506e-06!GO:0007264;small GTPase mediated signal transduction;3.82700866899008e-06!GO:0016881;acid-amino acid ligase activity;3.88570153942403e-06!GO:0042623;ATPase activity, coupled;4.20576030260726e-06!GO:0065004;protein-DNA complex assembly;4.30772104003501e-06!GO:0006163;purine nucleotide metabolic process;4.42182113492633e-06!GO:0005583;fibrillar collagen;4.42182113492633e-06!GO:0008219;cell death;4.42182113492633e-06!GO:0016265;death;4.42182113492633e-06!GO:0016568;chromatin modification;4.59971501962554e-06!GO:0005643;nuclear pore;4.67850408846748e-06!GO:0005768;endosome;4.72603999700585e-06!GO:0003713;transcription coactivator activity;5.57525082871216e-06!GO:0006732;coenzyme metabolic process;6.06746715667727e-06!GO:0043566;structure-specific DNA binding;6.1838904601563e-06!GO:0005694;chromosome;6.56414642679416e-06!GO:0045259;proton-transporting ATP synthase complex;6.79181116908742e-06!GO:0006606;protein import into nucleus;6.87719137037512e-06!GO:0019899;enzyme binding;7.53871864269076e-06!GO:0015980;energy derivation by oxidation of organic compounds;7.62219088440074e-06!GO:0005667;transcription factor complex;7.62219088440074e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.73115006641248e-06!GO:0009144;purine nucleoside triphosphate metabolic process;7.73115006641248e-06!GO:0000785;chromatin;7.74642367266191e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.90797861315862e-06!GO:0000074;regulation of progression through cell cycle;9.41573290088482e-06!GO:0005798;Golgi-associated vesicle;9.71755898807267e-06!GO:0051246;regulation of protein metabolic process;9.79350603162674e-06!GO:0051170;nuclear import;1.00294447067057e-05!GO:0009141;nucleoside triphosphate metabolic process;1.09075065685812e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.10080411319544e-05!GO:0009259;ribonucleotide metabolic process;1.10080411319544e-05!GO:0051726;regulation of cell cycle;1.11372878083102e-05!GO:0045892;negative regulation of transcription, DNA-dependent;1.16727050962414e-05!GO:0016563;transcription activator activity;1.19529233510923e-05!GO:0006084;acetyl-CoA metabolic process;1.45112422710781e-05!GO:0045786;negative regulation of progression through cell cycle;1.57631988868799e-05!GO:0032446;protein modification by small protein conjugation;1.62510642144596e-05!GO:0051128;regulation of cellular component organization and biogenesis;1.66337523693006e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.8525619965674e-05!GO:0065007;biological regulation;2.22735098459432e-05!GO:0046034;ATP metabolic process;2.31384858197717e-05!GO:0042802;identical protein binding;2.36171357359382e-05!GO:0050657;nucleic acid transport;2.37028279261263e-05!GO:0051236;establishment of RNA localization;2.37028279261263e-05!GO:0050658;RNA transport;2.37028279261263e-05!GO:0006334;nucleosome assembly;2.44986666897699e-05!GO:0009109;coenzyme catabolic process;2.92915389741533e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.13330594697595e-05!GO:0006403;RNA localization;3.15524891352138e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.21024443580945e-05!GO:0009152;purine ribonucleotide biosynthetic process;3.40002194366213e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.4045685871346e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.4045685871346e-05!GO:0003714;transcription corepressor activity;3.45297569564985e-05!GO:0016567;protein ubiquitination;3.59465495539145e-05!GO:0000245;spliceosome assembly;3.74522467969048e-05!GO:0006164;purine nucleotide biosynthetic process;3.96065504075197e-05!GO:0006974;response to DNA damage stimulus;4.09911107446534e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.1338495869744e-05!GO:0003697;single-stranded DNA binding;4.4502834589549e-05!GO:0044427;chromosomal part;4.46186021868827e-05!GO:0007265;Ras protein signal transduction;4.82031889823464e-05!GO:0009142;nucleoside triphosphate biosynthetic process;4.98097536367426e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.98097536367426e-05!GO:0016044;membrane organization and biogenesis;5.0424614121678e-05!GO:0051427;hormone receptor binding;5.19022253387054e-05!GO:0031497;chromatin assembly;5.4844499552763e-05!GO:0014706;striated muscle development;5.51372420469853e-05!GO:0048471;perinuclear region of cytoplasm;5.99444244390566e-05!GO:0005789;endoplasmic reticulum membrane;6.64890431702875e-05!GO:0006613;cotranslational protein targeting to membrane;7.37749083056703e-05!GO:0065002;intracellular protein transport across a membrane;7.81330693848793e-05!GO:0006754;ATP biosynthetic process;9.69556025604637e-05!GO:0006753;nucleoside phosphate metabolic process;9.69556025604637e-05!GO:0035257;nuclear hormone receptor binding;9.86700855297472e-05!GO:0051187;cofactor catabolic process;0.00010339182595026!GO:0000139;Golgi membrane;0.00010339182595026!GO:0006260;DNA replication;0.000104101360004791!GO:0045893;positive regulation of transcription, DNA-dependent;0.00010670931278317!GO:0005865;striated muscle thin filament;0.000107110496728034!GO:0008361;regulation of cell size;0.000127175310104856!GO:0045941;positive regulation of transcription;0.00013698477339947!GO:0016049;cell growth;0.000145411946031615!GO:0009260;ribonucleotide biosynthetic process;0.000146020582749781!GO:0030133;transport vesicle;0.00015611685384373!GO:0005839;proteasome core complex (sensu Eukaryota);0.000159175160926464!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000163529660172532!GO:0030027;lamellipodium;0.000166501883060986!GO:0043623;cellular protein complex assembly;0.000169559822179631!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000171813365016046!GO:0005813;centrosome;0.000174227345292393!GO:0000278;mitotic cell cycle;0.000174227345292393!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000178900044447779!GO:0006941;striated muscle contraction;0.000202626831219735!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000223419850897103!GO:0046930;pore complex;0.000232018907179994!GO:0030018;Z disc;0.000244336141267012!GO:0031674;I band;0.000244658748251861!GO:0051028;mRNA transport;0.000252048781159244!GO:0006916;anti-apoptosis;0.000279991941323681!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000280269459040514!GO:0003012;muscle system process;0.000280269459040514!GO:0006936;muscle contraction;0.000280269459040514!GO:0005083;small GTPase regulator activity;0.000295698270591595!GO:0006414;translational elongation;0.000301722512420311!GO:0016859;cis-trans isomerase activity;0.000326128072972468!GO:0030867;rough endoplasmic reticulum membrane;0.000345715905266282!GO:0043069;negative regulation of programmed cell death;0.000361227306594443!GO:0043066;negative regulation of apoptosis;0.000384428554320399!GO:0051188;cofactor biosynthetic process;0.000403067981948582!GO:0003690;double-stranded DNA binding;0.000411877045364324!GO:0051789;response to protein stimulus;0.000420653724816577!GO:0006986;response to unfolded protein;0.000420653724816577!GO:0005773;vacuole;0.000431779466213241!GO:0006281;DNA repair;0.000440342779049002!GO:0004298;threonine endopeptidase activity;0.000480126823147543!GO:0005770;late endosome;0.000500062299577885!GO:0005815;microtubule organizing center;0.00050569075144523!GO:0005523;tropomyosin binding;0.000612209882111442!GO:0044430;cytoskeletal part;0.000696175929829059!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000696175929829059!GO:0004812;aminoacyl-tRNA ligase activity;0.000696175929829059!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000696175929829059!GO:0005762;mitochondrial large ribosomal subunit;0.000711581143433869!GO:0000315;organellar large ribosomal subunit;0.000711581143433869!GO:0003924;GTPase activity;0.000717476775978783!GO:0009056;catabolic process;0.000720792310524508!GO:0030031;cell projection biogenesis;0.000763962106588019!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000800757349571438!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000801252525930512!GO:0004576;oligosaccharyl transferase activity;0.00082218449539465!GO:0004386;helicase activity;0.000880094350276407!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000913903822310907!GO:0007266;Rho protein signal transduction;0.00093343752594339!GO:0031589;cell-substrate adhesion;0.000941053210329984!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000978773709264078!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000978773709264078!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000978773709264078!GO:0008250;oligosaccharyl transferase complex;0.000979661957437738!GO:0005769;early endosome;0.000979876668148683!GO:0005525;GTP binding;0.00105594786697911!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00109004999061766!GO:0005791;rough endoplasmic reticulum;0.00111482708100386!GO:0003702;RNA polymerase II transcription factor activity;0.00113271632345405!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00115036264022601!GO:0001558;regulation of cell growth;0.00115526669565174!GO:0000323;lytic vacuole;0.00115526669565174!GO:0005764;lysosome;0.00115526669565174!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00118811896446257!GO:0033043;regulation of organelle organization and biogenesis;0.00118811896446257!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00120352865826546!GO:0005912;adherens junction;0.00120907400291946!GO:0030695;GTPase regulator activity;0.00124130059199406!GO:0043284;biopolymer biosynthetic process;0.00124847850077389!GO:0009719;response to endogenous stimulus;0.0012617116336582!GO:0009117;nucleotide metabolic process;0.00126597466858135!GO:0007160;cell-matrix adhesion;0.00132234197485972!GO:0008154;actin polymerization and/or depolymerization;0.00135883381831399!GO:0007519;skeletal muscle development;0.00151751560538088!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00154453259964816!GO:0051920;peroxiredoxin activity;0.0015459691521018!GO:0007005;mitochondrion organization and biogenesis;0.00157176150231557!GO:0005905;coated pit;0.00157176150231557!GO:0016529;sarcoplasmic reticulum;0.00172141081327172!GO:0016528;sarcoplasm;0.00172141081327172!GO:0043038;amino acid activation;0.00176925518951536!GO:0006418;tRNA aminoacylation for protein translation;0.00176925518951536!GO:0043039;tRNA aminoacylation;0.00176925518951536!GO:0001726;ruffle;0.00176925518951536!GO:0022890;inorganic cation transmembrane transporter activity;0.00183893492184458!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00196778798106715!GO:0044440;endosomal part;0.00197235794949959!GO:0010008;endosome membrane;0.00197235794949959!GO:0006091;generation of precursor metabolites and energy;0.00198783576471062!GO:0015631;tubulin binding;0.00199614303155616!GO:0030663;COPI coated vesicle membrane;0.00200596039928234!GO:0030126;COPI vesicle coat;0.00200596039928234!GO:0019222;regulation of metabolic process;0.00201379374948532!GO:0006897;endocytosis;0.00214413312104305!GO:0010324;membrane invagination;0.00214413312104305!GO:0035258;steroid hormone receptor binding;0.00214839984261161!GO:0000314;organellar small ribosomal subunit;0.00214839984261161!GO:0005763;mitochondrial small ribosomal subunit;0.00214839984261161!GO:0042254;ribosome biogenesis and assembly;0.00216231122156878!GO:0006612;protein targeting to membrane;0.00220149923792379!GO:0005874;microtubule;0.00227070015975033!GO:0008654;phospholipid biosynthetic process;0.0023530343580811!GO:0030934;anchoring collagen;0.00236875860093216!GO:0033673;negative regulation of kinase activity;0.00255975822464755!GO:0006469;negative regulation of protein kinase activity;0.00255975822464755!GO:0005048;signal sequence binding;0.00276151635305449!GO:0042981;regulation of apoptosis;0.00276151635305449!GO:0006979;response to oxidative stress;0.00284275174502855!GO:0033116;ER-Golgi intermediate compartment membrane;0.00284682479057451!GO:0003746;translation elongation factor activity;0.0029523641958206!GO:0030658;transport vesicle membrane;0.00337700172191152!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00360838627226374!GO:0015002;heme-copper terminal oxidase activity;0.00360838627226374!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00360838627226374!GO:0004129;cytochrome-c oxidase activity;0.00360838627226374!GO:0030118;clathrin coat;0.0036257442794184!GO:0000902;cell morphogenesis;0.00379393013029943!GO:0032989;cellular structure morphogenesis;0.00379393013029943!GO:0051301;cell division;0.00379497254392214!GO:0005885;Arp2/3 protein complex;0.00380519269459108!GO:0043067;regulation of programmed cell death;0.00414638783016255!GO:0003729;mRNA binding;0.00421007326430623!GO:0016197;endosome transport;0.00448156040185711!GO:0030134;ER to Golgi transport vesicle;0.00459904849724061!GO:0009966;regulation of signal transduction;0.00459904849724061!GO:0001725;stress fiber;0.00464501555891904!GO:0032432;actin filament bundle;0.00464501555891904!GO:0006891;intra-Golgi vesicle-mediated transport;0.00469987002905786!GO:0032561;guanyl ribonucleotide binding;0.00471554707012915!GO:0019001;guanyl nucleotide binding;0.00471554707012915!GO:0006402;mRNA catabolic process;0.00473743688866722!GO:0051168;nuclear export;0.00474342982126439!GO:0043488;regulation of mRNA stability;0.00474342982126439!GO:0043487;regulation of RNA stability;0.00474342982126439!GO:0043021;ribonucleoprotein binding;0.00493285909201168!GO:0003724;RNA helicase activity;0.00500821977417552!GO:0008139;nuclear localization sequence binding;0.00500821977417552!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.00512354217999725!GO:0005938;cell cortex;0.00513825882007903!GO:0005859;muscle myosin complex;0.00516425739129092!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00526234965312212!GO:0015399;primary active transmembrane transporter activity;0.00526234965312212!GO:0008026;ATP-dependent helicase activity;0.00528359657903276!GO:0051252;regulation of RNA metabolic process;0.00529523675092114!GO:0017022;myosin binding;0.00540843555739129!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.00547689663295249!GO:0007167;enzyme linked receptor protein signaling pathway;0.00548276953626991!GO:0051348;negative regulation of transferase activity;0.00582083304290819!GO:0030132;clathrin coat of coated pit;0.00594073614320604!GO:0030137;COPI-coated vesicle;0.00599988889680863!GO:0030832;regulation of actin filament length;0.00604105118395558!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00613069342982306!GO:0009108;coenzyme biosynthetic process;0.00620448466060661!GO:0000786;nucleosome;0.00649242529185182!GO:0022403;cell cycle phase;0.00693075394625695!GO:0016363;nuclear matrix;0.00713516598429567!GO:0006818;hydrogen transport;0.00730161731556649!GO:0032535;regulation of cellular component size;0.00737830186962966!GO:0005637;nuclear inner membrane;0.00741133677138418!GO:0005604;basement membrane;0.00746118640756123!GO:0030127;COPII vesicle coat;0.00766131649314182!GO:0012507;ER to Golgi transport vesicle membrane;0.00766131649314182!GO:0006607;NLS-bearing substrate import into nucleus;0.00789430105192951!GO:0005741;mitochondrial outer membrane;0.00800800239410706!GO:0046983;protein dimerization activity;0.00805268334962133!GO:0005586;collagen type III;0.00822095090369256!GO:0005593;FACIT collagen;0.00824031375741898!GO:0048500;signal recognition particle;0.00833198622492139!GO:0030518;steroid hormone receptor signaling pathway;0.00844125925494993!GO:0030041;actin filament polymerization;0.00849336496712656!GO:0030521;androgen receptor signaling pathway;0.0085415021055475!GO:0015992;proton transport;0.00855052692145913!GO:0008287;protein serine/threonine phosphatase complex;0.00884708428218714!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0093888707034664!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0093888707034664!GO:0016584;nucleosome positioning;0.0095294878922564!GO:0051287;NAD binding;0.00962335435373545!GO:0048522;positive regulation of cellular process;0.00971426023816092!GO:0018196;peptidyl-asparagine modification;0.00975900344238508!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00975900344238508!GO:0030660;Golgi-associated vesicle membrane;0.010043512996486!GO:0051087;chaperone binding;0.010144289474388!GO:0000059;protein import into nucleus, docking;0.0102124322193133!GO:0019867;outer membrane;0.0103493767813134!GO:0031968;organelle outer membrane;0.0103615808084616!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0104049922651898!GO:0008022;protein C-terminus binding;0.0107795674457104!GO:0016460;myosin II complex;0.010897340302638!GO:0006752;group transfer coenzyme metabolic process;0.0110103092021956!GO:0017166;vinculin binding;0.0112922113457263!GO:0006892;post-Golgi vesicle-mediated transport;0.0116869436814339!GO:0019904;protein domain specific binding;0.0116929668438875!GO:0045445;myoblast differentiation;0.0119152491513677!GO:0043492;ATPase activity, coupled to movement of substances;0.0120610463035795!GO:0030055;cell-matrix junction;0.0121585397580668!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.0122176961131127!GO:0005924;cell-substrate adherens junction;0.0123217906839256!GO:0043681;protein import into mitochondrion;0.0129900655482451!GO:0005100;Rho GTPase activator activity;0.0135268761283925!GO:0005578;proteinaceous extracellular matrix;0.0135734385463201!GO:0005201;extracellular matrix structural constituent;0.0137171894716154!GO:0042692;muscle cell differentiation;0.0139211790378898!GO:0005862;muscle thin filament tropomyosin;0.0140456293344851!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.0140761514697951!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.014239475992178!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.014239475992178!GO:0031032;actomyosin structure organization and biogenesis;0.0145199138629123!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0145554751754422!GO:0040008;regulation of growth;0.0149257521758489!GO:0043034;costamere;0.0151505659153621!GO:0001666;response to hypoxia;0.0155598001763885!GO:0031072;heat shock protein binding;0.0156876461738213!GO:0019843;rRNA binding;0.0162712381019257!GO:0051325;interphase;0.016540802020263!GO:0004721;phosphoprotein phosphatase activity;0.0167287958565964!GO:0004674;protein serine/threonine kinase activity;0.0167933251693587!GO:0050681;androgen receptor binding;0.0171854395748376!GO:0016311;dephosphorylation;0.017229993449135!GO:0001527;microfibril;0.0173021711883544!GO:0006942;regulation of striated muscle contraction;0.0192752067708985!GO:0006937;regulation of muscle contraction;0.0194813390636536!GO:0008286;insulin receptor signaling pathway;0.0197063070218925!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0197764086671935!GO:0045047;protein targeting to ER;0.0197764086671935!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0207635274405483!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0210308942111791!GO:0031625;ubiquitin protein ligase binding;0.0213120130528049!GO:0050811;GABA receptor binding;0.0215305862798385!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0215305862798385!GO:0016853;isomerase activity;0.0217131490317917!GO:0051329;interphase of mitotic cell cycle;0.0217229279822703!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0217229279822703!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0217229279822703!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0218656625127213!GO:0030199;collagen fibril organization;0.0220642270390223!GO:0048041;focal adhesion formation;0.0222770506589781!GO:0009081;branched chain family amino acid metabolic process;0.0222770506589781!GO:0005096;GTPase activator activity;0.0222770506589781!GO:0006839;mitochondrial transport;0.0223266366845754!GO:0005869;dynactin complex;0.0230350509557649!GO:0016791;phosphoric monoester hydrolase activity;0.0241399210511018!GO:0003711;transcription elongation regulator activity;0.0242487727615022!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.024372505233667!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0245949562841411!GO:0046314;phosphocreatine biosynthetic process;0.0246912368878375!GO:0006603;phosphocreatine metabolic process;0.0246912368878375!GO:0005684;U2-dependent spliceosome;0.0246912368878375!GO:0044448;cell cortex part;0.0255080755163029!GO:0045045;secretory pathway;0.0256054530084562!GO:0008047;enzyme activator activity;0.0256078487841428!GO:0030119;AP-type membrane coat adaptor complex;0.0256078487841428!GO:0048741;skeletal muscle fiber development;0.0256078487841428!GO:0048747;muscle fiber development;0.0256078487841428!GO:0042805;actinin binding;0.0257324646634388!GO:0048487;beta-tubulin binding;0.0262186448960024!GO:0008147;structural constituent of bone;0.0271790308421616!GO:0048468;cell development;0.0279128596884835!GO:0007050;cell cycle arrest;0.0279128596884835!GO:0016740;transferase activity;0.0282378941824359!GO:0000087;M phase of mitotic cell cycle;0.0284315957910917!GO:0005584;collagen type I;0.0284315957910917!GO:0046474;glycerophospholipid biosynthetic process;0.0286467441971018!GO:0031628;opioid receptor binding;0.02925980137058!GO:0031852;mu-type opioid receptor binding;0.02925980137058!GO:0008312;7S RNA binding;0.0293421918239941!GO:0000159;protein phosphatase type 2A complex;0.0293421918239941!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0294435117719864!GO:0000118;histone deacetylase complex;0.0296607540578232!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0300108000467344!GO:0005518;collagen binding;0.0300566480368949!GO:0007067;mitosis;0.0300936756508939!GO:0030125;clathrin vesicle coat;0.0304575830172941!GO:0030665;clathrin coated vesicle membrane;0.0304575830172941!GO:0004722;protein serine/threonine phosphatase activity;0.0313064411066574!GO:0051146;striated muscle cell differentiation;0.0317723177180352!GO:0030984;kininogen binding;0.0323368976940388!GO:0004213;cathepsin B activity;0.0323368976940388!GO:0005925;focal adhesion;0.0325878379691231!GO:0008186;RNA-dependent ATPase activity;0.0327821598779033!GO:0030522;intracellular receptor-mediated signaling pathway;0.0330337362235065!GO:0031901;early endosome membrane;0.0331349152472143!GO:0006338;chromatin remodeling;0.0332104870568519!GO:0016301;kinase activity;0.0337475458189109!GO:0051056;regulation of small GTPase mediated signal transduction;0.0340022075697862!GO:0055001;muscle cell development;0.0340022075697862!GO:0030239;myofibril assembly;0.0340022075697862!GO:0055002;striated muscle cell development;0.0340022075697862!GO:0006364;rRNA processing;0.0341461715028701!GO:0030131;clathrin adaptor complex;0.0346582504709977!GO:0008601;protein phosphatase type 2A regulator activity;0.0352731323646469!GO:0000792;heterochromatin;0.0352731323646469!GO:0005159;insulin-like growth factor receptor binding;0.0352731323646469!GO:0030659;cytoplasmic vesicle membrane;0.0352731323646469!GO:0005099;Ras GTPase activator activity;0.0361107428835025!GO:0045947;negative regulation of translational initiation;0.0367801423567979!GO:0006399;tRNA metabolic process;0.0369432546568245!GO:0006650;glycerophospholipid metabolic process;0.0370932542029926!GO:0033017;sarcoplasmic reticulum membrane;0.0372935611256591!GO:0008017;microtubule binding;0.0385007503895974!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0385205606362047!GO:0005605;basal lamina;0.0385583617603797!GO:0030911;TPR domain binding;0.0389253356142605!GO:0033018;sarcoplasmic reticulum lumen;0.0389802733499896!GO:0006509;membrane protein ectodomain proteolysis;0.0404197981460046!GO:0033619;membrane protein proteolysis;0.0404197981460046!GO:0007006;mitochondrial membrane organization and biogenesis;0.0405852437493245!GO:0031143;pseudopodium;0.0418436258501172!GO:0012506;vesicle membrane;0.0418962552934008!GO:0051260;protein homooligomerization;0.0419523458917741!GO:0005861;troponin complex;0.043422034943617!GO:0008097;5S rRNA binding;0.0436416796812261!GO:0016072;rRNA metabolic process;0.0436416796812261!GO:0043414;biopolymer methylation;0.0456062302017563!GO:0008180;signalosome;0.0458439615678459!GO:0030032;lamellipodium biogenesis;0.047486715110038!GO:0060090;molecular adaptor activity;0.0476719085458629!GO:0006376;mRNA splice site selection;0.0478435530346363!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0478435530346363!GO:0030140;trans-Golgi network transport vesicle;0.047861515622681!GO:0003682;chromatin binding;0.047861515622681!GO:0005819;spindle;0.047861515622681!GO:0048518;positive regulation of biological process;0.0479982501949267!GO:0019208;phosphatase regulator activity;0.0489450775250158!GO:0006635;fatty acid beta-oxidation;0.0490759047305196!GO:0009893;positive regulation of metabolic process;0.0496674415240785 | |||
|sample_id=10061 | |sample_id=10061 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=throat | |sample_tissue=throat | ||
|top_motifs=MEF2{A,B,C,D}:4.15116208778;ZNF384:3.91640936039;MYBL2:3.09895486916;HOX{A4,D4}:2.79698051754;SPZ1:2.58302879695;TGIF1:2.49203911724;SOX5:2.3343367086;MAZ:2.32883940431;IKZF2:2.29592656067;TAL1_TCF{3,4,12}:2.25636778738;HMGA1,2:2.13100996522;TBP:2.0858957283;PAX6:1.98704983596;HIC1:1.94559210094;GCM1,2:1.94526767579;POU3F1..4:1.90997601167;ZIC1..3:1.90072237726;LMO2:1.79146145848;CDC5L:1.77590019315;PAX5:1.77057916247;KLF4:1.7332640335;BPTF:1.6176458952;PATZ1:1.60519473547;RFX2..5_RFXANK_RFXAP:1.58618990389;MYOD1:1.57861284823;FOXP1:1.55831619468;MZF1:1.54143816735;RBPJ:1.520956569;NR5A1,2:1.50755890299;NKX6-1,2:1.50096531339;SP1:1.49583781116;PRDM1:1.46904314798;CDX1,2,4:1.46802542399;NKX2-3_NKX2-5:1.46220991139;TFAP2{A,C}:1.46108325652;FOXL1:1.44970094048;SMAD1..7,9:1.43342469515;FOXP3:1.42883231177;SNAI1..3:1.42091915791;MED-1{core}:1.419713458;FOXO1,3,4:1.38884041134;ESR1:1.37596929805;NR1H4:1.36300744738;VSX1,2:1.3350921463;NHLH1,2:1.31024142676;GLI1..3:1.24365770219;RFX1:1.24157551856;IKZF1:1.21958177719;SRF:1.19743740569;EP300:1.19064824687;TLX2:1.18014303675;TFAP2B:1.1557015509;GATA4:1.15326433847;GTF2I:1.1245911936;NR6A1:1.11256643031;NKX2-1,4:1.10729770233;NFATC1..3:1.10613096558;TEAD1:1.10217403215;RREB1:1.10047143325;TBX4,5:1.09896714734;EGR1..3:1.08894714299;XBP1:1.07193771986;TFAP4:1.06290321644;MTF1:1.05666865116;MTE{core}:1.03654086589;TLX1..3_NFIC{dimer}:1.01401794188;ALX1:1.00642315658;POU6F1:0.995917831195;GFI1B:0.981641095091;XCPE1{core}:0.955755896784;ZBTB16:0.942904579334;FOXD3:0.939265694946;SOX{8,9,10}:0.934947749866;GFI1:0.933940244573;CUX2:0.927193470179;TFCP2:0.919638988237;FOXN1:0.917684431086;ZEB1:0.900610765337;HMX1:0.892609252424;BREu{core}:0.846493900584;SOX2:0.834194771233;NFIX:0.825280335197;FOX{D1,D2}:0.814914652354;POU1F1:0.790730778634;NR3C1:0.789698758813;ZFP161:0.783893718381;ATF2:0.753163054284;POU5F1:0.752889303363;RORA:0.748929426224;GTF2A1,2:0.735293804859;NKX3-1:0.710703414531;LHX3,4:0.692939312091;HOX{A6,A7,B6,B7}:0.692816422233;NANOG{mouse}:0.68926704999;RXRA_VDR{dimer}:0.680609733007;MYFfamily:0.651411181257;FOXA2:0.631857455649;UFEwm:0.598338359674;HSF1,2:0.572364051032;AIRE:0.568621579759;TOPORS:0.542431477844;ZNF238:0.542293359511;FOXM1:0.54149989643;REST:0.533974456093;PBX1:0.470333874238;ZNF423:0.461406768841;FOXQ1:0.440732335365;SOX17:0.431926474273;NKX3-2:0.428326067934;DBP:0.421474321036;ZNF143:0.375200565382;TEF:0.294572297682;HBP1_HMGB_SSRP1_UBTF:0.294037821104;STAT1,3:0.289757661432;ZNF148:0.221363341695;PAX3,7:0.198899069452;ATF6:0.159979321929;NFY{A,B,C}:0.143391484916;YY1:0.135148682872;HAND1,2:0.113918986068;ARID5B:0.0979431644466;IRF7:0.0912956500984;NRF1:0.079870231066;STAT5{A,B}:0.06780926698;ALX4:0.0672587119971;GZF1:0.0670373962903;PITX1..3:0.0594139788839;EVI1:0.0543236657771;E2F1..5:-0.0138855277834;AR:-0.0322523968682;IRF1,2:-0.0347482944509;OCT4_SOX2{dimer}:-0.0354710669325;ONECUT1,2:-0.0370579123759;RXR{A,B,G}:-0.0517352507717;LEF1_TCF7_TCF7L1,2:-0.0551477998538;TP53:-0.0620913498787;PRRX1,2:-0.0867211201429;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.102684257242;ETS1,2:-0.13551743164;DMAP1_NCOR{1,2}_SMARC:-0.160869531248;GATA6:-0.165892574563;FOX{I1,J2}:-0.18930991981;ELF1,2,4:-0.195848866134;SREBF1,2:-0.200663968515;JUN:-0.212402757687;EN1,2:-0.242976898318;PAX4:-0.267026870616;STAT2,4,6:-0.274845304378;EBF1:-0.290379949466;ZBTB6:-0.298624269686;SPI1:-0.310690083592;NANOG:-0.387502008982;FOX{F1,F2,J1}:-0.392627161659;MAFB:-0.3938737986;PDX1:-0.395688279111;T:-0.396018905278;HNF4A_NR2F1,2:-0.401989353436;PAX1,9:-0.408006600711;ESRRA:-0.417271465132;TFDP1:-0.428639822483;SPIB:-0.430665781317;HES1:-0.442353454778;CREB1:-0.484174811206;PAX2:-0.538620110541;HNF1A:-0.578098933297;CRX:-0.595134267791;ATF4:-0.626901716712;NKX2-2,8:-0.63530178169;NFIL3:-0.645084983141;NFE2L1:-0.649883360488;HIF1A:-0.666528918339;ADNP_IRX_SIX_ZHX:-0.673748679085;HOXA9_MEIS1:-0.695080871277;NFKB1_REL_RELA:-0.730098403681;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.736412958037;RUNX1..3:-0.764353502169;HLF:-0.824084378297;FOSL2:-0.833818730169;ELK1,4_GABP{A,B1}:-0.871936788394;AHR_ARNT_ARNT2:-0.909418202468;FOS_FOS{B,L1}_JUN{B,D}:-1.0506927738;ATF5_CREB3:-1.05841964027;MYB:-1.06150266035;POU2F1..3:-1.10632421351;HOX{A5,B5}:-1.12465260136;BACH2:-1.14873482176;NFE2:-1.15819177442;CEBPA,B_DDIT3:-1.16860224223;NFE2L2:-1.44998330922;PAX8:-1.51231357873;bHLH_family:-1.66149427794;PPARG:-1.68436384075 | |top_motifs=MEF2{A,B,C,D}:4.15116208778;ZNF384:3.91640936039;MYBL2:3.09895486916;HOX{A4,D4}:2.79698051754;SPZ1:2.58302879695;TGIF1:2.49203911724;SOX5:2.3343367086;MAZ:2.32883940431;IKZF2:2.29592656067;TAL1_TCF{3,4,12}:2.25636778738;HMGA1,2:2.13100996522;TBP:2.0858957283;PAX6:1.98704983596;HIC1:1.94559210094;GCM1,2:1.94526767579;POU3F1..4:1.90997601167;ZIC1..3:1.90072237726;LMO2:1.79146145848;CDC5L:1.77590019315;PAX5:1.77057916247;KLF4:1.7332640335;BPTF:1.6176458952;PATZ1:1.60519473547;RFX2..5_RFXANK_RFXAP:1.58618990389;MYOD1:1.57861284823;FOXP1:1.55831619468;MZF1:1.54143816735;RBPJ:1.520956569;NR5A1,2:1.50755890299;NKX6-1,2:1.50096531339;SP1:1.49583781116;PRDM1:1.46904314798;CDX1,2,4:1.46802542399;NKX2-3_NKX2-5:1.46220991139;TFAP2{A,C}:1.46108325652;FOXL1:1.44970094048;SMAD1..7,9:1.43342469515;FOXP3:1.42883231177;SNAI1..3:1.42091915791;MED-1{core}:1.419713458;FOXO1,3,4:1.38884041134;ESR1:1.37596929805;NR1H4:1.36300744738;VSX1,2:1.3350921463;NHLH1,2:1.31024142676;GLI1..3:1.24365770219;RFX1:1.24157551856;IKZF1:1.21958177719;SRF:1.19743740569;EP300:1.19064824687;TLX2:1.18014303675;TFAP2B:1.1557015509;GATA4:1.15326433847;GTF2I:1.1245911936;NR6A1:1.11256643031;NKX2-1,4:1.10729770233;NFATC1..3:1.10613096558;TEAD1:1.10217403215;RREB1:1.10047143325;TBX4,5:1.09896714734;EGR1..3:1.08894714299;XBP1:1.07193771986;TFAP4:1.06290321644;MTF1:1.05666865116;MTE{core}:1.03654086589;TLX1..3_NFIC{dimer}:1.01401794188;ALX1:1.00642315658;POU6F1:0.995917831195;GFI1B:0.981641095091;XCPE1{core}:0.955755896784;ZBTB16:0.942904579334;FOXD3:0.939265694946;SOX{8,9,10}:0.934947749866;GFI1:0.933940244573;CUX2:0.927193470179;TFCP2:0.919638988237;FOXN1:0.917684431086;ZEB1:0.900610765337;HMX1:0.892609252424;BREu{core}:0.846493900584;SOX2:0.834194771233;NFIX:0.825280335197;FOX{D1,D2}:0.814914652354;POU1F1:0.790730778634;NR3C1:0.789698758813;ZFP161:0.783893718381;ATF2:0.753163054284;POU5F1:0.752889303363;RORA:0.748929426224;GTF2A1,2:0.735293804859;NKX3-1:0.710703414531;LHX3,4:0.692939312091;HOX{A6,A7,B6,B7}:0.692816422233;NANOG{mouse}:0.68926704999;RXRA_VDR{dimer}:0.680609733007;MYFfamily:0.651411181257;FOXA2:0.631857455649;UFEwm:0.598338359674;HSF1,2:0.572364051032;AIRE:0.568621579759;TOPORS:0.542431477844;ZNF238:0.542293359511;FOXM1:0.54149989643;REST:0.533974456093;PBX1:0.470333874238;ZNF423:0.461406768841;FOXQ1:0.440732335365;SOX17:0.431926474273;NKX3-2:0.428326067934;DBP:0.421474321036;ZNF143:0.375200565382;TEF:0.294572297682;HBP1_HMGB_SSRP1_UBTF:0.294037821104;STAT1,3:0.289757661432;ZNF148:0.221363341695;PAX3,7:0.198899069452;ATF6:0.159979321929;NFY{A,B,C}:0.143391484916;YY1:0.135148682872;HAND1,2:0.113918986068;ARID5B:0.0979431644466;IRF7:0.0912956500984;NRF1:0.079870231066;STAT5{A,B}:0.06780926698;ALX4:0.0672587119971;GZF1:0.0670373962903;PITX1..3:0.0594139788839;EVI1:0.0543236657771;E2F1..5:-0.0138855277834;AR:-0.0322523968682;IRF1,2:-0.0347482944509;OCT4_SOX2{dimer}:-0.0354710669325;ONECUT1,2:-0.0370579123759;RXR{A,B,G}:-0.0517352507717;LEF1_TCF7_TCF7L1,2:-0.0551477998538;TP53:-0.0620913498787;PRRX1,2:-0.0867211201429;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.102684257242;ETS1,2:-0.13551743164;DMAP1_NCOR{1,2}_SMARC:-0.160869531248;GATA6:-0.165892574563;FOX{I1,J2}:-0.18930991981;ELF1,2,4:-0.195848866134;SREBF1,2:-0.200663968515;JUN:-0.212402757687;EN1,2:-0.242976898318;PAX4:-0.267026870616;STAT2,4,6:-0.274845304378;EBF1:-0.290379949466;ZBTB6:-0.298624269686;SPI1:-0.310690083592;NANOG:-0.387502008982;FOX{F1,F2,J1}:-0.392627161659;MAFB:-0.3938737986;PDX1:-0.395688279111;T:-0.396018905278;HNF4A_NR2F1,2:-0.401989353436;PAX1,9:-0.408006600711;ESRRA:-0.417271465132;TFDP1:-0.428639822483;SPIB:-0.430665781317;HES1:-0.442353454778;CREB1:-0.484174811206;PAX2:-0.538620110541;HNF1A:-0.578098933297;CRX:-0.595134267791;ATF4:-0.626901716712;NKX2-2,8:-0.63530178169;NFIL3:-0.645084983141;NFE2L1:-0.649883360488;HIF1A:-0.666528918339;ADNP_IRX_SIX_ZHX:-0.673748679085;HOXA9_MEIS1:-0.695080871277;NFKB1_REL_RELA:-0.730098403681;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.736412958037;RUNX1..3:-0.764353502169;HLF:-0.824084378297;FOSL2:-0.833818730169;ELK1,4_GABP{A,B1}:-0.871936788394;AHR_ARNT_ARNT2:-0.909418202468;FOS_FOS{B,L1}_JUN{B,D}:-1.0506927738;ATF5_CREB3:-1.05841964027;MYB:-1.06150266035;POU2F1..3:-1.10632421351;HOX{A5,B5}:-1.12465260136;BACH2:-1.14873482176;NFE2:-1.15819177442;CEBPA,B_DDIT3:-1.16860224223;NFE2L2:-1.44998330922;PAX8:-1.51231357873;bHLH_family:-1.66149427794;PPARG:-1.68436384075 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10061-101H7;search_select_hide=table117:FF:10061-101H7 | |||
}} | }} | ||
Latest revision as of 12:18, 3 June 2020
| Name: | throat, fetal, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11770 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11770
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11770
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0546 |
| 10 | 10 | 0.0476 |
| 100 | 100 | 0.408 |
| 101 | 101 | 0.772 |
| 102 | 102 | 0.577 |
| 103 | 103 | 0.0595 |
| 104 | 104 | 0.551 |
| 105 | 105 | 0.764 |
| 106 | 106 | 0.16 |
| 107 | 107 | 0.978 |
| 108 | 108 | 0.935 |
| 109 | 109 | 0.00253 |
| 11 | 11 | 0.0694 |
| 110 | 110 | 0.166 |
| 111 | 111 | 0.0604 |
| 112 | 112 | 0.737 |
| 113 | 113 | 0.0199 |
| 114 | 114 | 0.00247 |
| 115 | 115 | 0.43 |
| 116 | 116 | 0.86 |
| 117 | 117 | 0.0147 |
| 118 | 118 | 0.0467 |
| 119 | 119 | 0.242 |
| 12 | 12 | 0.426 |
| 120 | 120 | 0.248 |
| 121 | 121 | 0.9 |
| 122 | 122 | 0.112 |
| 123 | 123 | 0.139 |
| 124 | 124 | 0.19 |
| 125 | 125 | 0.302 |
| 126 | 126 | 0.672 |
| 127 | 127 | 0.126 |
| 128 | 128 | 0.534 |
| 129 | 129 | 0.674 |
| 13 | 13 | 0.215 |
| 130 | 130 | 0.798 |
| 131 | 131 | 0.568 |
| 132 | 132 | 0.0795 |
| 133 | 133 | 0.302 |
| 134 | 134 | 0.472 |
| 135 | 135 | 0.47 |
| 136 | 136 | 0.325 |
| 137 | 137 | 0.502 |
| 138 | 138 | 0.452 |
| 139 | 139 | 0.137 |
| 14 | 14 | 0.737 |
| 140 | 140 | 0.652 |
| 141 | 141 | 0.273 |
| 142 | 142 | 0.287 |
| 143 | 143 | 1.3921e-4 |
| 144 | 144 | 0.85 |
| 145 | 145 | 0.663 |
| 146 | 146 | 0.472 |
| 147 | 147 | 0.315 |
| 148 | 148 | 0.0574 |
| 149 | 149 | 0.658 |
| 15 | 15 | 0.0563 |
| 150 | 150 | 0.42 |
| 151 | 151 | 0.477 |
| 152 | 152 | 0.46 |
| 153 | 153 | 0.606 |
| 154 | 154 | 0.809 |
| 155 | 155 | 0.164 |
| 156 | 156 | 0.626 |
| 157 | 157 | 0.804 |
| 158 | 158 | 0.414 |
| 159 | 159 | 0.81 |
| 16 | 16 | 0.315 |
| 160 | 160 | 0.522 |
| 161 | 161 | 0.373 |
| 162 | 162 | 0.262 |
| 163 | 163 | 0.0399 |
| 164 | 164 | 0.208 |
| 165 | 165 | 0.605 |
| 166 | 166 | 0.251 |
| 167 | 167 | 0.0861 |
| 168 | 168 | 0.829 |
| 169 | 169 | 0.0117 |
| 17 | 17 | 0.123 |
| 18 | 18 | 0.00571 |
| 19 | 19 | 0.777 |
| 2 | 2 | 0.713 |
| 20 | 20 | 0.139 |
| 21 | 21 | 0.484 |
| 22 | 22 | 0.367 |
| 23 | 23 | 0.576 |
| 24 | 24 | 0.188 |
| 25 | 25 | 0.61 |
| 26 | 26 | 0.0202 |
| 27 | 27 | 0.619 |
| 28 | 28 | 0.551 |
| 29 | 29 | 0.0435 |
| 3 | 3 | 0.126 |
| 30 | 30 | 0.194 |
| 31 | 31 | 0.736 |
| 32 | 32 | 0.191 |
| 33 | 33 | 0.292 |
| 34 | 34 | 0.783 |
| 35 | 35 | 0.183 |
| 36 | 36 | 0.0186 |
| 37 | 37 | 0.0358 |
| 38 | 38 | 0.31 |
| 39 | 39 | 0.734 |
| 4 | 4 | 0.717 |
| 40 | 40 | 0.0643 |
| 41 | 41 | 0.104 |
| 42 | 42 | 0.204 |
| 43 | 43 | 0.047 |
| 44 | 44 | 0.811 |
| 45 | 45 | 0.903 |
| 46 | 46 | 0.0722 |
| 47 | 47 | 0.0424 |
| 48 | 48 | 0.108 |
| 49 | 49 | 0.0495 |
| 5 | 5 | 0.331 |
| 50 | 50 | 0.889 |
| 51 | 51 | 0.345 |
| 52 | 52 | 0.915 |
| 53 | 53 | 0.733 |
| 54 | 54 | 0.382 |
| 55 | 55 | 0.333 |
| 56 | 56 | 0.446 |
| 57 | 57 | 0.265 |
| 58 | 58 | 0.323 |
| 59 | 59 | 0.167 |
| 6 | 6 | 0.759 |
| 60 | 60 | 0.526 |
| 61 | 61 | 0.13 |
| 62 | 62 | 0.22 |
| 63 | 63 | 0.484 |
| 64 | 64 | 0.222 |
| 65 | 65 | 0.28 |
| 66 | 66 | 0.0545 |
| 67 | 67 | 0.415 |
| 68 | 68 | 0.787 |
| 69 | 69 | 0.841 |
| 7 | 7 | 0.623 |
| 70 | 70 | 0.0325 |
| 71 | 71 | 0.0191 |
| 72 | 72 | 0.158 |
| 73 | 73 | 0.102 |
| 74 | 74 | 0.468 |
| 75 | 75 | 0.0152 |
| 76 | 76 | 0.125 |
| 77 | 77 | 0.509 |
| 78 | 78 | 0.0989 |
| 79 | 79 | 0.649 |
| 8 | 8 | 0.0904 |
| 80 | 80 | 0.896 |
| 81 | 81 | 0.404 |
| 82 | 82 | 0.314 |
| 83 | 83 | 0.473 |
| 84 | 84 | 0.781 |
| 85 | 85 | 0.336 |
| 86 | 86 | 0.176 |
| 87 | 87 | 0.00227 |
| 88 | 88 | 0.78 |
| 89 | 89 | 0.526 |
| 9 | 9 | 0.8 |
| 90 | 90 | 0.0868 |
| 91 | 91 | 0.673 |
| 92 | 92 | 0.376 |
| 93 | 93 | 0.974 |
| 94 | 94 | 0.0446 |
| 95 | 95 | 0.00647 |
| 96 | 96 | 0.277 |
| 97 | 97 | 0.965 |
| 98 | 98 | 0.117 |
| 99 | 99 | 0.55 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11770
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010061 human throat - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000341 (throat)
0000974 (neck)
0000479 (tissue)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0000153 (anterior region of body)
0007811 (craniocervical region)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010061 (human throat - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
