FF:10010-101C1: Difference between revisions

Latest revision as of 12:13, 3 June 2020

Name:	adipose tissue, adult, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs10615
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	adipose tissue
dev stage	65,65,76 years old adult
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Ambion
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	0910061 -1
catalog number	Cat:AM6000 Lot:0910061 -1
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-ToTALLY-RNA-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005635

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10615		CAGE		DRX008615		DRR009487

Accession ID Hg19

Library id		BAM		CTSS
CNhs10615		DRZ000912		DRZ002297

Accession ID Hg38

Library id		BAM		CTSS
CNhs10615		DRZ012262		DRZ013647

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0404
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.24
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.648
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.158
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0.112
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.158
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0.239
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.112
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.234
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.276
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.2
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.158
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.287
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0.0594
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0.463
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.157
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.0594
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0.0594
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.552
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.392
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.442
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.239
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.112
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.00381
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.00391
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0584
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.523
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0665
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.392
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.417
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.112
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0.505
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.505
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.081
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0594
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.112
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0.0594
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0.0594
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.14
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.0594
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0.0203
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.239
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.112
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0.0594
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0.0594
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10615

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.122
MA0003.1	MA0003.1	0.157
MA0004.1	MA0004.1	0.307
MA0006.1	MA0006.1	0.344
MA0007.1	MA0007.1	0.444
MA0009.1	MA0009.1	0.199
MA0014.1	MA0014.1	0.261
MA0017.1	MA0017.1	0.193
MA0018.2	MA0018.2	0.0875
MA0019.1	MA0019.1	0.0174
MA0024.1	MA0024.1	0.0242
MA0025.1	MA0025.1	0.913
MA0027.1	MA0027.1	0.554
MA0028.1	MA0028.1	1.67532e-6
MA0029.1	MA0029.1	0.569
MA0030.1	MA0030.1	0.011
MA0031.1	MA0031.1	0.003
MA0035.2	MA0035.2	0.238
MA0038.1	MA0038.1	0.406
MA0039.2	MA0039.2	0.933
MA0040.1	MA0040.1	0.367
MA0041.1	MA0041.1	0.0723
MA0042.1	MA0042.1	0.133
MA0043.1	MA0043.1	0.293
MA0046.1	MA0046.1	0.544
MA0047.2	MA0047.2	0.0578
MA0048.1	MA0048.1	0.0162
MA0050.1	MA0050.1	1.07754e-4
MA0051.1	MA0051.1	0.00717
MA0052.1	MA0052.1	1.29901e-11
MA0055.1	MA0055.1	4.32924e-5
MA0057.1	MA0057.1	0.795
MA0058.1	MA0058.1	0.358
MA0059.1	MA0059.1	0.0292
MA0060.1	MA0060.1	3.71016e-5
MA0061.1	MA0061.1	0.00665
MA0062.2	MA0062.2	3.91524e-8
MA0065.2	MA0065.2	0.466
MA0066.1	MA0066.1	0.232
MA0067.1	MA0067.1	0.459
MA0068.1	MA0068.1	3.46449e-4
MA0069.1	MA0069.1	0.845
MA0070.1	MA0070.1	0.551
MA0071.1	MA0071.1	0.327
MA0072.1	MA0072.1	0.794
MA0073.1	MA0073.1	0.928
MA0074.1	MA0074.1	0.844
MA0076.1	MA0076.1	3.15592e-7
MA0077.1	MA0077.1	0.854
MA0078.1	MA0078.1	0.0815
MA0079.2	MA0079.2	0.239
MA0080.2	MA0080.2	0.00171
MA0081.1	MA0081.1	0.265
MA0083.1	MA0083.1	0.00135
MA0084.1	MA0084.1	0.673
MA0087.1	MA0087.1	0.225
MA0088.1	MA0088.1	0.0504
MA0090.1	MA0090.1	0.0361
MA0091.1	MA0091.1	0.414
MA0092.1	MA0092.1	0.129
MA0093.1	MA0093.1	0.259
MA0099.2	MA0099.2	2.89192e-6
MA0100.1	MA0100.1	0.421
MA0101.1	MA0101.1	0.0897
MA0102.2	MA0102.2	0.404
MA0103.1	MA0103.1	0.00245
MA0104.2	MA0104.2	0.0108
MA0105.1	MA0105.1	7.35399e-5
MA0106.1	MA0106.1	0.0907
MA0107.1	MA0107.1	0.0838
MA0108.2	MA0108.2	1.56709e-12
MA0111.1	MA0111.1	0.895
MA0112.2	MA0112.2	0.654
MA0113.1	MA0113.1	0.024
MA0114.1	MA0114.1	0.375
MA0115.1	MA0115.1	0.731
MA0116.1	MA0116.1	0.0146
MA0117.1	MA0117.1	0.231
MA0119.1	MA0119.1	0.657
MA0122.1	MA0122.1	0.208
MA0124.1	MA0124.1	0.214
MA0125.1	MA0125.1	0.926
MA0131.1	MA0131.1	0.378
MA0135.1	MA0135.1	0.46
MA0136.1	MA0136.1	0.155
MA0137.2	MA0137.2	5.15049e-7
MA0138.2	MA0138.2	0.271
MA0139.1	MA0139.1	0.019
MA0140.1	MA0140.1	0.189
MA0141.1	MA0141.1	0.298
MA0142.1	MA0142.1	0.0408
MA0143.1	MA0143.1	0.746
MA0144.1	MA0144.1	3.61999e-4
MA0145.1	MA0145.1	0.0244
MA0146.1	MA0146.1	0.203
MA0147.1	MA0147.1	0.00418
MA0148.1	MA0148.1	0.0486
MA0149.1	MA0149.1	0.225
MA0150.1	MA0150.1	0.0282
MA0152.1	MA0152.1	0.343
MA0153.1	MA0153.1	0.264
MA0154.1	MA0154.1	0.924
MA0155.1	MA0155.1	0.304
MA0156.1	MA0156.1	0.606
MA0157.1	MA0157.1	0.0336
MA0159.1	MA0159.1	0.676
MA0160.1	MA0160.1	0.62
MA0162.1	MA0162.1	0.749
MA0163.1	MA0163.1	6.74361e-6
MA0164.1	MA0164.1	0.26
MA0258.1	MA0258.1	0.143
MA0259.1	MA0259.1	0.0717

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10615

Novel motif	Logo	P-value
1	1	0.0672
10	10	0.178
100	100	0.0753
101	101	0.516
102	102	0.348
103	103	0.447
104	104	0.437
105	105	0.529
106	106	0.42
107	107	0.0862
108	108	0.92
109	109	0.0958
11	11	0.18
110	110	0.256
111	111	0.112
112	112	0.859
113	113	0.343
114	114	0.174
115	115	0.258
116	116	0.637
117	117	0.00751
118	118	0.00952
119	119	0.622
12	12	0.867
120	120	0.0428
121	121	0.433
122	122	0.619
123	123	0.00409
124	124	0.765
125	125	0.323
126	126	0.695
127	127	0.463
128	128	0.637
129	129	0.704
13	13	0.206
130	130	0.728
131	131	0.6
132	132	0.157
133	133	0.135
134	134	0.582
135	135	0.0802
136	136	0.95
137	137	0.48
138	138	0.827
139	139	0.939
14	14	0.685
140	140	0.0161
141	141	0.522
142	142	0.417
143	143	0.0327
144	144	0.857
145	145	0.435
146	146	0.251
147	147	0.274
148	148	0.454
149	149	0.262
15	15	0.125
150	150	0.902
151	151	0.896
152	152	0.186
153	153	0.152
154	154	0.465
155	155	0.213
156	156	0.896
157	157	0.693
158	158	0.304
159	159	0.966
16	16	0.684
160	160	0.725
161	161	0.391
162	162	0.921
163	163	0.667
164	164	0.0622
165	165	0.161
166	166	0.967
167	167	0.0399
168	168	0.604
169	169	0.838
17	17	0.737
18	18	0.2
19	19	0.127
2	2	0.0833
20	20	0.0421
21	21	0.997
22	22	0.585
23	23	0.113
24	24	0.899
25	25	0.494
26	26	0.111
27	27	0.672
28	28	0.459
29	29	0.0309
3	3	0.371
30	30	0.0956
31	31	0.868
32	32	0.414
33	33	0.355
34	34	0.112
35	35	0.402
36	36	0.103
37	37	0.381
38	38	0.828
39	39	0.009
4	4	0.0794
40	40	0.0686
41	41	0.766
42	42	0.244
43	43	0.568
44	44	0.328
45	45	0.153
46	46	0.266
47	47	0.123
48	48	0.178
49	49	0.0782
5	5	0.916
50	50	0.425
51	51	0.852
52	52	0.222
53	53	0.887
54	54	0.819
55	55	0.634
56	56	0.607
57	57	0.136
58	58	0.695
59	59	0.542
6	6	0.554
60	60	0.395
61	61	0.388
62	62	0.757
63	63	0.932
64	64	0.126
65	65	0.749
66	66	0.0177
67	67	0.389
68	68	0.282
69	69	0.213
7	7	0.712
70	70	0.279
71	71	0.0811
72	72	0.453
73	73	0.684
74	74	0.949
75	75	0.0253
76	76	0.0722
77	77	0.091
78	78	0.547
79	79	0.408
8	8	0.404
80	80	0.305
81	81	0.78
82	82	0.997
83	83	0.278
84	84	0.519
85	85	0.226
86	86	0.875
87	87	0.173
88	88	0.809
89	89	0.671
9	9	0.193
90	90	0.548
91	91	0.305
92	92	0.415
93	93	0.179
94	94	0.176
95	95	0.0133
96	96	0.983
97	97	0.308
98	98	0.532
99	99	0.435

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10615

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010010 human adipose tissue - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0001013 (adipose tissue)
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010010 (human adipose tissue - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
+|DRA_sample_Accession=CAGE@SAMD00005635
+|accession_numbers=CAGE;DRX008615;DRR009487;DRZ000912;DRZ002297;DRZ012262;DRZ013647
 |ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0001013,UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
 |ancestors_in_cell_lineage_facet=
@@ Line 7: / Line 9: @@
 |created_by=
 |creation_date=
-|datafreeze_phase=1
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr3:12330560..12330579,+!p1@PPARG!2.13!152.37!PPARG;;chr21:39870339..39870443,-!p1@ERG!1.99!97.72!ERG;;chr11:113930425..113930471,+!p1@ZBTB16!1.97!130.39!ZBTB16;;chr20:62680984..62680999,-!p1@SOX18!1.87!96.26!SOX18;;chr11:47400078..47400106,-!p1@SPI1!1.83!66.66!SPI1;;chr19:46801639..46801699,+!p1@HIF3A!1.82!65.20!HIF3A;;chr2:68592406..68592424,+!p1@PLEK!1.82!64.90!PLEK;;chr8:55370487..55370503,+!p1@SOX17!1.78!59.19!SOX17;;chr1:170632285..170632309,+!p1@PRRX1!1.75!62.71!PRRX1;;chr16:85932760..85932775,+!p1@IRF8!1.67!45.42!IRF8;;chr11:47279504..47279563,+!p1@NR1H3!1.66!99.48!NR1H3;;chr15:42749722..42749739,-!p2@ZFP106!1.66!78.09!ZFP106;;chr7:15726243..15726293,-!p2@MEOX2!1.65!43.95!MEOX2;;chr5:71803177..71803255,-!p1@ZNF366!1.65!43.22!ZNF366;;chr11:113930291..113930339,+!p2@ZBTB16!1.57!58.02!ZBTB16;;chr12:52437488..52437507,+!p2@NR4A1!1.57!36.19!NR4A1;;chr7:15726296..15726315,-!p1@MEOX2!1.57!35.89!MEOX2;;chr8:10588010..10588030,-!p1@SOX7!1.54!33.40!SOX7;;chr8:25902876..25902936,-!p1@EBF2!1.53!32.96!EBF2;;chr12:54778471..54778528,-!p1@ZNF385A!1.51!31.65!ZNF385A;;chr11:113930401..113930422,+!p3@ZBTB16!1.51!31.50!ZBTB16;;chr3:21792682..21792720,-!p1@ZNF385D!1.50!30.91!ZNF385D;;chr7:73038839..73038862,-!p1@MLXIPL!1.49!29.89!MLXIPL;;chr19:33793430..33793447,-!p1@CEBPA!1.46!113.54!CEBPA;;chr18:53068911..53068935,-!p4@TCF4!1.46!31.65!TCF4;;chr3:169381420..169381535,-!p1@MECOM!1.42!29.30!MECOM;;chr14:74256787..74256858,-!p6@C14orf43!1.41!24.61!C14orf43;;chr20:39317868..39317884,-!p1@MAFB!1.40!273.97!MAFB;;chr3:12329397..12329433,+!p2@PPARG!1.40!54.21!PPARG;;chr3:126076242..126076257,-!p1@KLF15!1.40!29.59!KLF15;;chr1:40105299..40105326,-!p1@HEYL!1.37!22.71!HEYL;;chr10:63809013..63809041,+!p3@ARID5B!1.35!115.01!ARID5B;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.34!20.95!HOXC5;;chr17:6926362..6926377,+!p1@BCL6B!1.33!20.36!BCL6B;;chr18:53177984..53178004,-!p17@TCF4!1.32!20.07!TCF4;;chr20:51588873..51588953,+!p1@TSHZ2!1.30!25.05!TSHZ2;;chr7:115670804..115670825,-!p1@TFEC!1.27!17.43!TFEC;;chr5:88178983..88179012,-!p1@MEF2C!1.26!130.25!MEF2C;;chr18:53089538..53089578,-!p14@TCF4!1.26!16.99!TCF4;;chr5:158526917..158526932,-!p1@EBF1!1.22!38.97!EBF1;;chr3:21792585..21792625,-!p2@ZNF385D!1.21!16.99!ZNF385D;;chr9:124991204..124991246,-!p1@LHX6!1.21!15.24!LHX6;;chr6:391743..391759,+!p1@IRF4!1.21!15.09!IRF4;;chr12:24715376..24715432,-!p1@SOX5!1.20!18.90!SOX5;;chr13:41240737..41240787,-!p1@FOXO1!1.19!170.39!FOXO1;;chr11:47400062..47400077,-!p2@SPI1!1.19!14.65!SPI1;;chr7:44143925..44143970,+!p1@AEBP1!1.18!310.30!AEBP1;;chr2:145277882..145277967,-!p3@ZEB2!1.18!24.17!ZEB2;;chr1:61548225..61548299,+!p1@NFIA!1.16!174.49!NFIA;;chr16:79634624..79634642,-!p1@MAF!1.15!51.28!MAF;;chr12:10875658..10875708,-!p2@CSDA!1.15!29.89!CSDA;;chr13:41240717..41240735,-!p2@FOXO1!1.14!86.59!FOXO1;;chr10:45495946..45495976,+!p2@ZNF22!1.13!12.45!ZNF22;;chr4:26165074..26165110,+!p9@RBPJ!1.12!12.16!RBPJ;;chr22:38597987..38598021,+!p2@MAFF!1.11!73.11!MAFF;;chr1:61548374..61548415,+!p4@NFIA!1.11!22.12!NFIA;;chr17:41739283..41739297,-!p1@MEOX1!1.11!11.87!MEOX1;;chr10:131762504..131762555,-!p1@EBF3!1.10!11.57!EBF3;;chr8:48650715..48650735,-!p1@CEBPD!1.09!1443.25!CEBPD;;chr3:12392991..12393030,+!p7@PPARG!1.09!11.43!PPARG;;chr12:54393880..54393962,+!p1@HOXC9!1.09!11.43!HOXC9;;chr3:69788576..69788648,+!p1@MITF!1.08!59.34!MITF;;chr1:158969752..158969780,+!p6@IFI16!1.08!19.49!IFI16;;chr11:128457446..128457461,-!p4@ETS1!1.08!10.99!ETS1;;chr10:63809077..63809089,+!p5@ARID5B!1.07!23.44!ARID5B;;chr16:79633894..79633954,-!p3@MAF!1.07!21.10!MAF;;chr10:63809106..63809127,+!p1@ARID5B!1.06!143.43!ARID5B;;chr2:176994408..176994492,+!p1@HOXD8!1.05!10.26!HOXD8;;chr2:46524537..46524553,+!p1@EPAS1!1.04!979.11!EPAS1;;chrX:106960285..106960299,-!p1@TSC22D3!1.04!270.01!TSC22D3;;chr17:40440481..40440550,+!p1@STAT5A!1.04!72.81!STAT5A;;chr9:73028814..73028895,-!p1@KLF9!1.03!97.72!KLF9;;chr9:73029219..73029289,-!p2@KLF9!1.03!30.03!KLF9;;chr18:52989031..52989079,-!p2@TCF4!1.03!23.29!TCF4;;chr13:72441315..72441454,-!p1@DACH1!1.03!19.49!DACH1;;chr6:106546808..106546833,+!p3@PRDM1!1.03!12.45!PRDM1;;chr3:21792631..21792665,-!p3@ZNF385D!1.03!9.67!ZNF385D;;chr12:26277956..26277980,-!p1@BHLHE41!1.02!34.43!BHLHE41;;chr3:126076264..126076305,-!p2@KLF15!1.02!13.33!KLF15;;chr17:53342311..53342400,+!p1@HLF!1.02!10.84!HLF;;chr6:108977520..108977534,+!p7@FOXO3!1.02!9.38!FOXO3;;chr3:187463179..187463201,-!p2@BCL6!1.01!38.97!BCL6;;chr3:12329358..12329393,+!p3@PPARG!1.01!23.29!PPARG;;chr16:79634595..79634620,-!p2@MAF!1.01!17.29!MAF;;chr1:170632115..170632136,+!p9@PRRX1!1.01!9.23!PRRX1;;chr2:145275162..145275202,-!p2@ZEB2!1.00!54.79!ZEB2;;chr1:61548069..61548102,+!p3@NFIA!1.00!22.12!NFIA;;chr7:15726220..15726236,-!p4@MEOX2!1.00!8.94!MEOX2;;chr12:52445218..52445237,+!p1@NR4A1!0.99!113.40!NR4A1;;chr1:170632959..170632987,+!p4@PRRX1!0.99!9.67!PRRX1;;chr2:19558373..19558392,-!p1@OSR1!0.98!24.17!OSR1;;chr1:170633262..170633285,+!p3@PRRX1!0.98!9.82!PRRX1;;chr3:12392932..12392962,+!p8@PPARG!0.98!8.50!PPARG;;chr2:239756671..239756732,+!p1@TWIST2!0.97!27.54!TWIST2;;chr1:170633348..170633399,+!p2@PRRX1!0.97!11.57!PRRX1;;chr5:158526459..158526481,-!p2@EBF1!0.97!11.28!EBF1;;chr12:81101404..81101421,+!p1@MYF6!0.97!8.35!MYF6;;chr1:221052776..221052799,+!p1@HLX!0.96!14.94!HLX;;chr7:44143997..44144008,+!p3@AEBP1!0.96!10.40!AEBP1;;chr5:88180342..88180365,-!p10@MEF2C!0.96!8.06!MEF2C;;chr6:126240380..126240430,+!p2@NCOA7!0.95!21.24!NCOA7;;chr10:63808979..63808990,+!p8@ARID5B!0.95!8.64!ARID5B;;chr3:114790132..114790174,-!p18@ZBTB20!0.95!7.91!ZBTB20;;chr6:19837592..19837621,+!p1@ID4!0.94!49.37!ID4;;chr12:96588368..96588394,+!p3@ELK3!0.94!21.54!ELK3;;chr3:114819124..114819200,-!p3@ZBTB20!0.94!18.46!ZBTB20;;chr7:27192185..27192209,-!p1@HOXA3!0.94!7.62!HOXA3;;chr7:19157248..19157268,-!p1@TWIST1!0.93!21.24!TWIST1;;chr3:24536253..24536328,-!p1@THRB!0.93!14.65!THRB;;chr7:44143978..44143989,+!p2@AEBP1!0.93!14.21!AEBP1;;chr3:168864315..168864339,-!p2@MECOM!0.93!12.60!MECOM;;chr8:80679993..80680011,-!p1@HEY1!0.93!11.13!HEY1;;chrX:66763856..66763896,+!p1@AR!0.93!11.13!AR;;chrX:107018969..107019024,-!p6@TSC22D3!0.93!10.40!TSC22D3;;chr20:51589133..51589159,+!p2@TSHZ2!0.93!7.47!TSHZ2;;chr8:106330656..106330684,+!p1@ZFPM2!0.92!19.78!ZFPM2;;chr10:31288398..31288455,-!p2@ZNF438!0.92!8.64!ZNF438;;chr7:63505799..63505904,+!p1@ZNF727!0.92!7.33!ZNF727;;chr1:170633058..170633084,+!p5@PRRX1!0.92!7.33!PRRX1;;chr7:28725740..28725778,+!p1@CREB5!0.91!66.51!CREB5;;chr2:145274900..145274934,-!p4@ZEB2!0.91!45.42!ZEB2;;chr10:35484804..35484902,+!p2@CREM!0.91!28.57!CREM;;chr2:85980951..85981004,+!p1@ATOH8!0.91!12.01!ATOH8;;chr11:113930477..113930488,+!p4@ZBTB16!0.91!7.18!ZBTB16;;chr2:28615716..28615733,+!p1@FOSL2!0.90!341.51!FOSL2;;chr9:14314566..14314618,-!p1@NFIB!0.90!87.90!NFIB;;chr5:88179195..88179224,-!p3@MEF2C!0.90!11.28!MEF2C;;chr12:54779511..54779577,-!p5@ZNF385A!0.90!7.03!ZNF385A;;chr18:53257001..53257015,-!p5@TCF4!0.89!12.01!TCF4;;chr7:137620684..137620711,-!p4@CREB3L2!0.89!6.74!CREB3L2;;chr1:170632137..170632172,+!p10@PRRX1!0.89!6.74!PRRX1;;chr2:177001290..177001315,+!p1@HOXD3!0.89!6.74!HOXD3;;chr19:16435625..16435682,+!p1@KLF2!0.88!225.92!KLF2;;chr3:114343768..114343822,-!p1@ZBTB20!0.88!30.03!ZBTB20;;chrX:56258844..56258882,+!p1@KLF8!0.88!9.23!KLF8;;chr3:114790272..114790294,-!p34@ZBTB20!0.88!6.59!ZBTB20;;chr19:54041669..54041697,+!p2@ZNF331!0.88!6.59!ZNF331;;chr2:46524897..46524911,+!p2@EPAS1!0.87!18.90!EPAS1;;chr7:15725757..15725828,-!p5@MEOX2!0.87!6.45!MEOX2;;chr1:119530706..119530736,-!p3@TBX15!0.86!6.30!TBX15;;chr11:47399996..47400014,-!p4@SPI1!0.86!6.30!SPI1;;chr12:54378923..54378966,+!p1@HOXC10!0.86!6.30!HOXC10;;chr2:145277640..145277771,-!p1@ZEB2!0.85!87.17!ZEB2;;chr5:88179017..88179046,-!p2@MEF2C!0.85!25.79!MEF2C;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.85!6.15!HOXC5;;chr11:113930355..113930366,+!p5@ZBTB16!0.85!6.01!ZBTB16;;chr3:12393032..12393047,+!p15@PPARG!0.85!6.01!PPARG;;chr15:96873984..96873999,+!p3@NR2F2!0.84!46.30!NR2F2;;chr7:19157043..19157088,-!p2@TWIST1!0.84!15.68!TWIST1;;chr1:23694556..23694584,-!p6@ZNF436!0.84!7.76!ZNF436;;chrX:107019163..107019179,-!p7@TSC22D3!0.84!6.89!TSC22D3;;chr7:137620650..137620677,-!p3@CREB3L2!0.84!5.86!CREB3L2;;chr17:38256822..38256851,-!p1@NR1D1!0.83!48.49!NR1D1;;chr20:50179368..50179392,-!p2@NFATC2!0.83!7.62!NFATC2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.83!5.71!PEG3;;chrY:21906594..21906622,-!p1@KDM5D!0.83!5.71!KDM5D;;chr3:114866084..114866118,-!p2@ZBTB20!0.82!21.83!ZBTB20;;chr1:170632250..170632277,+!p7@PRRX1!0.82!5.57!PRRX1;;chr7:113726357..113726443,+!p1@FOXP2!0.81!9.67!FOXP2;;chr19:45260775..45260838,+!p5@BCL3!0.81!7.18!BCL3;;chr5:158526756..158526797,-!p3@EBF1!0.81!5.42!EBF1;;chr4:26165146..26165163,+!p19@RBPJ!0.81!5.42!RBPJ;;chr9:110252035..110252057,-!p1@KLF4!0.80!91.86!KLF4;;chr4:87928413..87928433,+!p3@AFF1!0.80!36.04!AFF1;;chr10:51572408..51572454,+!p3@NCOA4!0.80!33.70!NCOA4;;chr15:60884706..60884743,-!p1@RORA!0.80!29.30!RORA;;chr1:61547894..61547968,+!p2@NFIA!0.80!16.41!NFIA;;chr16:3313791..3313834,+!p2@ZNF263!0.80!12.45!ZNF263;;chr2:239756739..239756755,+!p2@TWIST2!0.80!9.38!TWIST2;;chr1:8483756..8483809,-!p5@RERE!0.79!15.53!RERE;;chr13:41635067..41635100,-!p5@ELF1!0.79!10.26!ELF1;;chr12:26277817..26277863,-!p2@BHLHE41!0.79!7.18!BHLHE41;;chr3:168864383..168864400,-!p7@MECOM!0.79!5.13!MECOM;;chr18:22932080..22932170,-!p1@ZNF521!0.78!23.00!ZNF521;;chr2:231084639..231084654,-!p2@SP110!0.78!8.79!SP110;;chr7:27213893..27213954,-!p1@HOXA10!0.78!4.98!HOXA10;;chr6:126112074..126112144,+!p1@NCOA7!0.77!71.79!NCOA7;;chr18:53255415..53255491,-!p1@TCF4!0.77!44.98!TCF4;;chr4:140098339..140098392,-!p1@ELF2!0.77!44.39!ELF2;;chr3:71179699..71179744,-!p2@FOXP1!0.77!39.85!FOXP1;;chr4:87928353..87928401,+!p4@AFF1!0.77!24.03!AFF1;;chr10:63809134..63809145,+!p6@ARID5B!0.77!12.01!ARID5B;;chr11:47399947..47399961,-!p3@SPI1!0.77!4.83!SPI1;;chr11:47400032..47400043,-!p5@SPI1!0.77!4.83!SPI1;;chr3:114790179..114790213,-!p22@ZBTB20!0.77!4.83!ZBTB20;;c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@@ Line 37: / Line 40: @@
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@@ Line 45: / Line 59: @@
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 |sample_cell_line=
@@ Line 82: / Line 99: @@
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 |xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10010-101C1;search_select_hide=table117:FF:10010-101C1
 }}

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FF:10010-101C1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:13, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0