FF:10204-103F6: Difference between revisions

Revision as of 14:51, 15 May 2017

Name:	vagina, adult
Species:	Human (Homo sapiens)
Library ID:	CNhs12854
Sample type:	tissues
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	NA
dev stage	NA
sex	F
age	68
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Biochain
collaboration	NA
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	R1234283-10
sample type	NA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005937

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12854		CAGE		DRX008758		DRR009630

Accession ID Hg19

Library id		BAM		CTSS
CNhs12854		DRZ001055		DRZ002440

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0104
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.41
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.435
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0677
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.28
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.139
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.222
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.42
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.614
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.948
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.261
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.174
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.222
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.658
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.222
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.222
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0.368
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0128
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12854

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00903
MA0003.1	MA0003.1	0.702
MA0004.1	MA0004.1	0.365
MA0006.1	MA0006.1	0.557
MA0007.1	MA0007.1	0.689
MA0009.1	MA0009.1	0.119
MA0014.1	MA0014.1	0.36
MA0017.1	MA0017.1	0.153
MA0018.2	MA0018.2	0.834
MA0019.1	MA0019.1	0.122
MA0024.1	MA0024.1	0.0411
MA0025.1	MA0025.1	0.573
MA0027.1	MA0027.1	0.817
MA0028.1	MA0028.1	6.80957e-4
MA0029.1	MA0029.1	0.539
MA0030.1	MA0030.1	9.79043e-7
MA0031.1	MA0031.1	0.00136
MA0035.2	MA0035.2	0.202
MA0038.1	MA0038.1	0.611
MA0039.2	MA0039.2	0.743
MA0040.1	MA0040.1	0.0951
MA0041.1	MA0041.1	0.0581
MA0042.1	MA0042.1	0.124
MA0043.1	MA0043.1	0.713
MA0046.1	MA0046.1	0.0133
MA0047.2	MA0047.2	0.0141
MA0048.1	MA0048.1	0.246
MA0050.1	MA0050.1	0.82
MA0051.1	MA0051.1	0.79
MA0052.1	MA0052.1	0.015
MA0055.1	MA0055.1	0.0719
MA0057.1	MA0057.1	0.927
MA0058.1	MA0058.1	0.259
MA0059.1	MA0059.1	0.00676
MA0060.1	MA0060.1	0.255
MA0061.1	MA0061.1	0.0221
MA0062.2	MA0062.2	1.129e-5
MA0065.2	MA0065.2	0.00858
MA0066.1	MA0066.1	0.00906
MA0067.1	MA0067.1	0.501
MA0068.1	MA0068.1	7.33932e-6
MA0069.1	MA0069.1	0.891
MA0070.1	MA0070.1	0.655
MA0071.1	MA0071.1	0.0799
MA0072.1	MA0072.1	0.545
MA0073.1	MA0073.1	0.87
MA0074.1	MA0074.1	0.482
MA0076.1	MA0076.1	7.08353e-5
MA0077.1	MA0077.1	0.558
MA0078.1	MA0078.1	0.381
MA0079.2	MA0079.2	0.28
MA0080.2	MA0080.2	0.602
MA0081.1	MA0081.1	0.423
MA0083.1	MA0083.1	0.00218
MA0084.1	MA0084.1	0.883
MA0087.1	MA0087.1	0.17
MA0088.1	MA0088.1	0.0863
MA0090.1	MA0090.1	0.0218
MA0091.1	MA0091.1	0.882
MA0092.1	MA0092.1	0.773
MA0093.1	MA0093.1	0.367
MA0099.2	MA0099.2	4.95215e-4
MA0100.1	MA0100.1	0.093
MA0101.1	MA0101.1	0.239
MA0102.2	MA0102.2	0.0114
MA0103.1	MA0103.1	0.136
MA0104.2	MA0104.2	0.0116
MA0105.1	MA0105.1	2.8229e-6
MA0106.1	MA0106.1	0.105
MA0107.1	MA0107.1	0.315
MA0108.2	MA0108.2	3.08198e-11
MA0111.1	MA0111.1	0.512
MA0112.2	MA0112.2	0.00588
MA0113.1	MA0113.1	0.137
MA0114.1	MA0114.1	0.0523
MA0115.1	MA0115.1	0.0374
MA0116.1	MA0116.1	3.19712e-5
MA0117.1	MA0117.1	0.478
MA0119.1	MA0119.1	0.687
MA0122.1	MA0122.1	0.6
MA0124.1	MA0124.1	0.489
MA0125.1	MA0125.1	0.387
MA0131.1	MA0131.1	0.464
MA0135.1	MA0135.1	0.0194
MA0136.1	MA0136.1	0.0284
MA0137.2	MA0137.2	3.76052e-6
MA0138.2	MA0138.2	0.542
MA0139.1	MA0139.1	0.151
MA0140.1	MA0140.1	0.518
MA0141.1	MA0141.1	0.01
MA0142.1	MA0142.1	0.0696
MA0143.1	MA0143.1	0.546
MA0144.1	MA0144.1	0.0263
MA0145.1	MA0145.1	0.338
MA0146.1	MA0146.1	0.22
MA0147.1	MA0147.1	0.0025
MA0148.1	MA0148.1	0.0183
MA0149.1	MA0149.1	0.0432
MA0150.1	MA0150.1	0.156
MA0152.1	MA0152.1	0.473
MA0153.1	MA0153.1	0.0488
MA0154.1	MA0154.1	0.0791
MA0155.1	MA0155.1	0.907
MA0156.1	MA0156.1	0.0141
MA0157.1	MA0157.1	0.177
MA0159.1	MA0159.1	0.144
MA0160.1	MA0160.1	0.112
MA0162.1	MA0162.1	0.446
MA0163.1	MA0163.1	3.26858e-11
MA0164.1	MA0164.1	0.587
MA0258.1	MA0258.1	0.0152
MA0259.1	MA0259.1	0.122

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12854

Novel motif	Logo	P-value
1	1	0.0158
10	10	0.0517
100	100	0.116
101	101	0.366
102	102	0.303
103	103	0.0917
104	104	0.416
105	105	0.806
106	106	0.453
107	107	0.735
108	108	0.991
109	109	0.0156
11	11	0.0179
110	110	0.176
111	111	0.00727
112	112	0.384
113	113	0.5
114	114	0.0189
115	115	0.523
116	116	0.313
117	117	0.0165
118	118	0.111
119	119	0.639
12	12	0.818
120	120	0.246
121	121	0.659
122	122	0.616
123	123	0.0533
124	124	0.723
125	125	0.021
126	126	0.827
127	127	0.641
128	128	0.677
129	129	0.326
13	13	0.0467
130	130	0.433
131	131	0.182
132	132	0.401
133	133	0.534
134	134	0.51
135	135	0.758
136	136	0.527
137	137	0.522
138	138	0.551
139	139	0.382
14	14	0.781
140	140	0.413
141	141	0.237
142	142	0.584
143	143	0.0497
144	144	0.689
145	145	0.337
146	146	0.542
147	147	0.568
148	148	0.0495
149	149	0.469
15	15	0.0429
150	150	0.491
151	151	0.72
152	152	0.696
153	153	0.959
154	154	0.534
155	155	0.366
156	156	0.485
157	157	0.677
158	158	0.609
159	159	0.499
16	16	0.0502
160	160	0.394
161	161	0.202
162	162	0.382
163	163	0.735
164	164	0.0359
165	165	0.732
166	166	0.913
167	167	0.0284
168	168	0.878
169	169	0.0979
17	17	0.498
18	18	0.109
19	19	0.963
2	2	0.432
20	20	0.285
21	21	0.279
22	22	0.967
23	23	0.395
24	24	0.832
25	25	0.316
26	26	0.0123
27	27	0.664
28	28	0.776
29	29	0.00469
3	3	0.11
30	30	0.105
31	31	0.737
32	32	0.0544
33	33	0.142
34	34	0.373
35	35	0.152
36	36	0.0189
37	37	0.0919
38	38	0.649
39	39	0.496
4	4	0.235
40	40	0.0659
41	41	0.34
42	42	0.272
43	43	0.225
44	44	0.0425
45	45	0.385
46	46	0.024
47	47	0.0242
48	48	0.0804
49	49	0.0705
5	5	0.4
50	50	0.758
51	51	0.408
52	52	0.411
53	53	0.745
54	54	0.996
55	55	0.923
56	56	0.805
57	57	0.167
58	58	0.571
59	59	0.841
6	6	0.672
60	60	0.997
61	61	0.129
62	62	0.365
63	63	0.495
64	64	0.0765
65	65	0.6
66	66	0.1
67	67	0.723
68	68	0.453
69	69	0.183
7	7	0.227
70	70	0.0544
71	71	0.0156
72	72	0.736
73	73	0.218
74	74	0.558
75	75	0.0265
76	76	0.139
77	77	0.787
78	78	0.0588
79	79	0.13
8	8	0.0435
80	80	0.884
81	81	0.234
82	82	0.184
83	83	0.901
84	84	0.827
85	85	0.782
86	86	0.751
87	87	0.0671
88	88	0.884
89	89	0.22
9	9	0.566
90	90	0.0813
91	91	0.884
92	92	0.928
93	93	0.0247
94	94	0.0776
95	95	0.00478
96	96	0.288
97	97	0.801
98	98	0.0753
99	99	0.732

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12854

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010204 human vagina - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000996 (vagina)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0004119 (endoderm-derived structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010204 (human vagina - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr6:134210243..134210257,+!p1@TCF21!1.97!92.54!TCF21;;chr19:46801639..46801699,+!p1@HIF3A!1.90!77.89!HIF3A;;chr11:113930425..113930471,+!p1@ZBTB16!1.83!94.54!ZBTB16;;chr6:1312325..1312340,+!p1@FOXQ1!1.81!101.20!FOXQ1;;chr20:62680984..62680999,-!p1@SOX18!1.77!76.56!SOX18;;chr7:44143925..44143970,+!p1@AEBP1!1.76!1173.73!AEBP1;;chr16:86544113..86544145,+!p1@FOXF1!1.75!67.24!FOXF1;;chr15:42749722..42749739,-!p2@ZFP106!1.68!81.89!ZFP106;;chr11:34642612..34642646,+!p1@EHF!1.67!45.27!EHF;;chr7:44143978..44143989,+!p2@AEBP1!1.64!75.90!AEBP1;;chr7:35293685..35293718,-!p1@TBX20!1.61!39.28!TBX20;;chr3:126076242..126076257,-!p1@KLF15!1.59!46.60!KLF15;;chr1:201979743..201979762,+!p1@ELF3!1.59!37.95!ELF3;;chr11:113930401..113930422,+!p3@ZBTB16!1.58!37.28!ZBTB16;;chr21:39870339..39870443,-!p1@ERG!1.54!33.95!ERG;;chr22:38380543..38380569,-!p1@SOX10!1.53!32.62!SOX10;;chr1:201979703..201979721,+!p2@ELF3!1.52!31.96!ELF3;;chr5:134369879..134369898,-!p2@PITX1!1.49!29.96!PITX1;;chr7:27192185..27192209,-!p1@HOXA3!1.49!29.96!HOXA3;;chr7:44143997..44144008,+!p3@AEBP1!1.48!37.28!AEBP1;;chr12:52445218..52445237,+!p1@NR4A1!1.44!319.56!NR4A1;;chr12:52437488..52437507,+!p2@NR4A1!1.44!26.63!NR4A1;;chr10:8096631..8096660,+!p1@GATA3!1.43!31.29!GATA3;;chr3:169381420..169381535,-!p1@MECOM!1.43!29.96!MECOM;;chr17:6926362..6926377,+!p1@BCL6B!1.43!25.96!BCL6B;;chr1:40105299..40105326,-!p1@HEYL!1.42!25.30!HEYL;;chr11:47400078..47400106,-!p1@SPI1!1.41!24.63!SPI1;;chr11:113930291..113930339,+!p2@ZBTB16!1.40!38.61!ZBTB16;;chr20:51588873..51588953,+!p1@TSHZ2!1.39!30.62!TSHZ2;;chr13:72441315..72441454,-!p1@DACH1!1.37!43.94!DACH1;;chr4:174451370..174451387,-!p1@HAND2!1.37!22.64!HAND2;;chr5:71803177..71803255,-!p1@ZNF366!1.37!22.64!ZNF366;;chr8:10588010..10588030,-!p1@SOX7!1.37!22.64!SOX7;;chr9:77112244..77112262,+!p1@RORB!1.35!23.97!RORB;;chr7:44143738..44143760,+!p4@AEBP1!1.33!23.30!AEBP1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.31!ZBED1;;chr3:128212033..128212051,-!p1@GATA2!1.29!18.64!GATA2;;chr10:131762504..131762555,-!p1@EBF3!1.28!17.98!EBF3;;chr17:46682321..46682362,-!p1@HOXB6!1.26!17.31!HOXB6;;chr2:19558373..19558392,-!p1@OSR1!1.25!45.94!OSR1;;chr1:61548069..61548102,+!p3@NFIA!1.25!40.61!NFIA;;chr7:15726243..15726293,-!p2@MEOX2!1.25!16.64!MEOX2;;chr7:113726357..113726443,+!p1@FOXP2!1.24!27.96!FOXP2;;chr1:209979467..209979494,-!p1@IRF6!1.23!17.98!IRF6;;chr4:174450089..174450153,-!p2@HAND2!1.23!15.98!HAND2;;chrX:106960285..106960299,-!p1@TSC22D3!1.22!411.44!TSC22D3;;chr7:63505799..63505904,+!p1@ZNF727!1.21!15.31!ZNF727;;chr8:48650715..48650735,-!p1@CEBPD!1.20!1832.16!CEBPD;;chr3:126076264..126076305,-!p2@KLF15!1.20!20.64!KLF15;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.19!14.65!PEG3;;chr2:177001290..177001315,+!p1@HOXD3!1.18!13.98!HOXD3;;chr6:85474299..85474324,-!p1@TBX18!1.17!24.63!TBX18;;chr14:38064429..38064486,-!p1@FOXA1!1.16!13.32!FOXA1;;chr12:26277956..26277980,-!p1@BHLHE41!1.15!46.60!BHLHE41;;chr5:134369905..134369972,-!p1@PITX1!1.15!19.97!PITX1;;chr8:106330656..106330684,+!p1@ZFPM2!1.14!33.29!ZFPM2;;chr1:214161272..214161322,+!p1@PROX1!1.14!17.98!PROX1;;chr12:115122318..115122331,-!p2@TBX3!1.14!12.65!TBX3;;chr7:15726296..15726315,-!p1@MEOX2!1.14!12.65!MEOX2;;chr1:61548225..61548299,+!p1@NFIA!1.13!161.11!NFIA;;chrX:66763856..66763896,+!p1@AR!1.13!17.98!AR;;chr3:12330560..12330579,+!p1@PPARG!1.12!13.98!PPARG;;chr9:114287433..114287513,+!p1@ZNF483!1.11!31.29!ZNF483;;chr11:34642656..34642667,+!p2@EHF!1.11!11.98!EHF;;chr15:96873984..96873999,+!p3@NR2F2!1.10!84.55!NR2F2;;chr17:7492684..7492778,-!p2@SOX15!1.10!24.63!SOX15;;chr20:2673383..2673441,+!p1@EBF4!1.10!18.64!EBF4;;chr11:12696579..12696611,+!p4@TEAD1!1.09!11.32!TEAD1;;chr5:122424918..122424944,+!p1@PRDM6!1.09!11.32!PRDM6;;chr12:115122005..115122016,-!p3@TBX3!1.08!13.32!TBX3;;chr1:61548374..61548415,+!p4@NFIA!1.07!19.97!NFIA;;chr12:115121802..115121814,-!p5@TBX3!1.07!10.65!TBX3;;chr2:176994408..176994492,+!p1@HOXD8!1.07!10.65!HOXD8;;chr9:94186101..94186122,-!p1@NFIL3!1.06!146.47!NFIL3;;chr1:61547894..61547968,+!p2@NFIA!1.06!30.62!NFIA;;chr3:24536253..24536328,-!p1@THRB!1.06!19.97!THRB;;chr12:80085061..80085119,-!p6@PAWR!1.06!16.64!PAWR;;chr2:85980919..85980942,+!p4@ATOH8!1.06!11.32!ATOH8;;chr4:4861385..4861398,+!p1@MSX1!1.05!30.62!MSX1;;chr17:59477197..59477212,+!p2@TBX2!1.05!17.98!TBX2;;chrX:107019163..107019179,-!p7@TSC22D3!1.05!11.98!TSC22D3;;chr2:145275162..145275202,-!p2@ZEB2!1.04!59.92!ZEB2;;chr18:19749541..19749557,+!p1@GATA6!1.04!31.96!GATA6;;chrX:107018969..107019024,-!p6@TSC22D3!1.04!13.98!TSC22D3;;chr18:53068911..53068935,-!p4@TCF4!1.04!11.32!TCF4;;chr3:21792682..21792720,-!p1@ZNF385D!1.04!9.99!ZNF385D;;chr9:124991204..124991246,-!p1@LHX6!1.04!9.99!LHX6;;chr2:145277882..145277967,-!p3@ZEB2!1.02!16.64!ZEB2;;chr12:54785074..54785122,-!p2@ZNF385A!1.02!14.65!ZNF385A;;chr2:85980951..85981004,+!p1@ATOH8!1.01!15.31!ATOH8;;chr8:106330696..106330719,+!p2@ZFPM2!1.01!11.98!ZFPM2;;chr17:53342311..53342400,+!p1@HLF!1.01!10.65!HLF;;chr17:46690839..46690884,-!p1@HOXB8!1.01!9.32!HOXB8;;chr6:391743..391759,+!p1@IRF4!1.01!9.32!IRF4;;chr7:27205136..27205164,-!p1@HOXA9!1.01!9.32!HOXA9;;chr7:27224842..27224872,-!p1@HOXA11!1.01!9.32!HOXA11;;chr12:115121770..115121781,-!p4@TBX3!1.01!9.32!TBX3;;chr2:28615716..28615733,+!p1@FOSL2!1.00!432.08!FOSL2;;chr3:71632864..71632885,-!p4@FOXP1!1.00!31.29!FOXP1;;chr5:158526459..158526481,-!p2@EBF1!1.00!11.98!EBF1;;chr1:164528410..164528428,+!p1@PBX1!0.99!67.91!PBX1;;chr9:14314131..14314147,-!p2@NFIB!0.99!49.93!NFIB;;chr3:69788576..69788648,+!p1@MITF!0.99!47.93!MITF;;chr12:24715376..24715432,-!p1@SOX5!0.99!11.32!SOX5;;chr10:111985713..111985774,+!p2@MXI1!0.98!83.22!MXI1;;chr17:46687959..46688007,-!p2@HOXB7!0.98!11.98!HOXB7;;chr13:73633131..73633149,+!p1@KLF5!0.97!90.54!KLF5;;chr16:73093174..73093209,-!p3@ZFHX3!0.97!11.32!ZFHX3;;chr3:18466787..18466839,-!p1@SATB1!0.96!37.28!SATB1;;chr1:170632285..170632309,+!p1@PRRX1!0.96!9.32!PRRX1;;chr14:89883509..89883587,-!p2@FOXN3!0.95!55.92!FOXN3;;chr19:33793430..33793447,-!p1@CEBPA!0.95!34.62!CEBPA;;chr3:187463179..187463201,-!p2@BCL6!0.95!33.95!BCL6;;chr5:122424955..122424988,+!p2@PRDM6!0.95!7.99!PRDM6;;chr18:45935720..45935772,-!p1@ZBTB7C!0.95!7.99!ZBTB7C;;chr15:37392616..37392638,-!p2@MEIS2!0.94!24.63!MEIS2;;chr5:158526917..158526932,-!p1@EBF1!0.94!19.97!EBF1;;chr2:28618532..28618610,+!p4@FOSL2!0.94!13.32!FOSL2;;chr18:19749386..19749404,+!p2@GATA6!0.94!11.32!GATA6;;chr14:33408072..33408114,+!p2@NPAS3!0.94!9.32!NPAS3;;chrX:70315688..70315709,+!p1@FOXO4!0.93!17.98!FOXO4;;chr3:114819124..114819200,-!p3@ZBTB20!0.93!17.98!ZBTB20;;chr17:38256822..38256851,-!p1@NR1D1!0.92!59.25!NR1D1;;chr2:10183651..10183713,+!p1@KLF11!0.92!55.26!KLF11;;chr1:8483878..8483907,-!p4@RERE!0.92!29.29!RERE;;chr1:40367668..40367684,-!p2@MYCL1!0.92!7.32!MYCL1;;chr6:1312155..1312187,+!p2@FOXQ1!0.92!7.32!FOXQ1;;chr7:50344289..50344323,+!p1@IKZF1!0.92!7.32!IKZF1;;chr8:25902876..25902936,-!p1@EBF2!0.92!7.32!EBF2;;chr11:125034640..125034655,+!p1@PKNOX2!0.92!7.32!PKNOX2;;chr14:64761083..64761101,-!p1@ESR2!0.92!7.32!ESR2;;chr3:189507432..189507459,+!p1@TP63!0.92!7.32!TP63;;chr9:132427883..132427951,+!p2@PRRX2!0.92!7.32!PRRX2;;chr19:16435625..16435682,+!p1@KLF2!0.91!238.34!KLF2;;chr3:128206762..128206781,-!p2@GATA2!0.91!46.60!GATA2;;chr3:12329397..12329433,+!p2@PPARG!0.91!16.64!PPARG;;chr12:52430894..52430952,+!p3@NR4A1!0.91!13.98!NR4A1;;chr9:16870710..16870763,-!p1@BNC2!0.91!12.65!BNC2;;chr20:50159198..50159299,-!p1@NFATC2!0.91!10.65!NFATC2;;chr5:88178983..88179012,-!p1@MEF2C!0.90!55.92!MEF2C;;chr2:46524897..46524911,+!p2@EPAS1!0.90!19.97!EPAS1;;chr16:3313791..3313834,+!p2@ZNF263!0.90!15.98!ZNF263;;chr2:10091815..10091864,+!p1@GRHL1!0.90!9.32!GRHL1;;chr18:56530573..56530591,+!p9@ZNF532!0.90!8.65!ZNF532;;chr17:38219209..38219230,+!p1@THRA!0.89!92.54!THRA;;chr5:139487363..139487444,+!p1@PURA!0.89!53.93!PURA;;chr10:63809013..63809041,+!p3@ARID5B!0.89!39.28!ARID5B;;chr14:61116183..61116208,-!p1@SIX1!0.88!25.96!SIX1;;chr2:239756671..239756732,+!p1@TWIST2!0.88!21.97!TWIST2;;chr1:8483756..8483809,-!p5@RERE!0.88!19.31!RERE;;chr15:61521417..61521460,-!p2@RORA!0.88!15.31!RORA;;chr9:94186085..94186096,-!p3@NFIL3!0.88!11.32!NFIL3;;chr17:46655672..46655697,-!p3@HOXB4!0.88!6.66!HOXB4;;chr2:114036488..114036504,-!p1@PAX8!0.88!6.66!PAX8;;chr7:27170359..27170381,-!p1@HOXA4!0.88!6.66!HOXA4;;chr8:55370487..55370503,+!p1@SOX17!0.88!6.66!SOX17;;chr8:93115274..93115323,-!p4@RUNX1T1!0.88!6.66!RUNX1T1;;chr1:200008734..200008765,+!p2@NR5A2!0.88!6.66!NR5A2;;chr20:61051039..61051057,-!p1@GATA5!0.88!6.66!GATA5;;chr11:113930355..113930366,+!p5@ZBTB16!0.88!6.66!ZBTB16;;chr12:115122303..115122314,-!p6@TBX3!0.88!6.66!TBX3;;chr13:37494248..37494260,-!p3@SMAD9!0.88!6.66!SMAD9;;chr16:79634624..79634642,-!p1@MAF!0.87!26.63!MAF;;chr7:19157043..19157088,-!p2@TWIST1!0.87!16.64!TWIST1;;chr7:6655225..6655279,+!p1@ENST00000457543!0.87!9.99!ZNF853;;chr22:38597987..38598021,+!p2@MAFF!0.86!40.61!MAFF;;chr1:153939955..153940009,+!p2@CREB3L4!0.86!15.31!CREB3L4;;chr3:25469724..25469773,+!p1@RARB!0.86!9.32!RARB;;chr1:170633348..170633399,+!p2@PRRX1!0.86!8.65!PRRX1;;chr6:126070769..126070801,+!p1@HEY2!0.86!7.32!HEY2;;chr5:172483347..172483407,+!p1@C5orf41!0.85!48.60!CREBRF;;chr14:21994449..21994524,-!p2@SALL2!0.85!19.31!SALL2;;chr9:102584159..102584174,+!p2@NR4A3!0.85!11.32!NR4A3;;chr10:8095593..8095625,+!p3@GATA3!0.85!7.32!GATA3;;chr4:26322419..26322479,+!p2@RBPJ!0.84!76.56!RBPJ;;chr2:66662249..66662267,+!p2@MEIS1!0.84!23.97!MEIS1;;chr17:59477233..59477263,+!p1@TBX2!0.84!19.31!TBX2;;chr16:4323246..4323299,-!p5@TFAP4!0.84!5.99!TFAP4;;chr16:67198633..67198671,+!p1@HSF4!0.84!5.99!HSF4;;chr17:80797886..80797906,-!p1@ZNF750!0.84!5.99!ZNF750;;chr7:27196267..27196311,-!p1@HOXA7!0.84!5.99!HOXA7;;chr7:73038839..73038862,-!p1@MLXIPL!0.84!5.99!MLXIPL;;chr21:34442439..34442455,+!p1@OLIG1!0.84!5.99!OLIG1;;chr3:24536485..24536500,-!p3@THRB!0.84!5.99!THRB;;chr13:37494275..37494304,-!p2@SMAD9!0.84!5.99!SMAD9;;chr3:71179699..71179744,-!p2@FOXP1!0.83!45.94!FOXP1;;chr5:92918894..92918912,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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000990;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001353;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003134;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003975;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004122
 |ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0006603,UBERON:0010316
 |fonse_cell_line=

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FF:10204-103F6: Difference between revisions

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Revision as of 14:51, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0