FFCP PHASE1:Mm9::chrX:39855773..39855829,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20400 | |EntrezGene=20400 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=O88890,Q544F1 | |UniProt=O88890,Q544F1 | ||
|association_with_transcript=0bp_to_NM_011364,uc009tbb.1_5end | |association_with_transcript=0bp_to_NM_011364,uc009tbb.1_5end | ||
|cluster_id=chrX:39855773..39855829,+ | |||
|description=CAGE_peak_1_at_Sh2d1a_5end | |description=CAGE_peak_1_at_Sh2d1a_5end | ||
|id=chrX:39855773..39855829,+ | |id=chrX:39855773..39855829,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.80e-09!9;CL:0000789!4.80e-09!9;CL:0002420!4.80e-09!9;CL:0002419!4.80e-09!9;CL:0000790!4.80e-09!9;CL:0000624!3.31e-08!8;CL:0000838!2.72e-07!12;CL:0000084!8.95e-07!11;CL:0000827!8.95e-07!11 | |ontology_enrichment_celltype=CL:0000791!4.80e-09!9;CL:0000789!4.80e-09!9;CL:0002420!4.80e-09!9;CL:0002419!4.80e-09!9;CL:0000790!4.80e-09!9;CL:0000624!3.31e-08!8;CL:0000838!2.72e-07!12;CL:0000084!8.95e-07!11;CL:0000827!8.95e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.01e-17,9;CL:0000789,1.01e-17,9;CL:0002420,1.01e-17,9;CL:0002419,1.01e-17,9;CL:0000790,1.01e-17,9;CL:0000624,6.50e-16,8;CL:0000084,3.91e-14,11;CL:0000827,3.91e-14,11;CL:0000838,8.62e-13,12;CL:0000893,5.51e-12,6;CL:0002489,5.51e-12,6;CL:0000898,5.51e-12,6;CL:0000809,5.51e-12,6;CL:0000810,5.51e-12,6;CL:0000895,5.51e-12,6;CL:0000808,5.51e-12,6;CL:0000894,5.51e-12,6;CL:0000806,5.51e-12,6;CL:0000807,5.51e-12,6;CL:0000805,5.51e-12,6;CL:0002425,5.51e-12,6;CL:0002436,5.51e-12,6;CL:0002427,5.51e-12,6;CL:0002428,5.51e-12,6;CL:0002429,5.51e-12,6;CL:0002433,5.51e-12,6;CL:0002431,5.51e-12,6;CL:0002432,5.51e-12,6;CL:0000542,1.18e-11,13;CL:0000051,1.18e-11,13;CL:0002031,5.53e-11,25;CL:0000738,1.86e-08,17;CL:0002087,1.86e-08,17;CL:0000988,6.61e-08,32;CL:0002032,6.61e-08,32;CL:0000037,6.61e-08,32;CL:0000837,6.61e-08,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.13e-16!29;UBERON:0003408!1.09e-15!24;UBERON:0002370!4.49e-15!23;UBERON:0000974!4.49e-15!23;UBERON:0004807!4.49e-15!23;UBERON:0005058!4.49e-15!23;UBERON:0003351!4.49e-15!23;UBERON:0009113!4.49e-15!23;UBERON:0003295!4.49e-15!23;UBERON:0009722!4.49e-15!23;UBERON:0005562!4.49e-15!23;UBERON:0007690!4.49e-15!23;UBERON:0002193!3.63e-14!48;UBERON:0006562!4.57e-14!24;UBERON:0001557!4.57e-14!24;UBERON:0001042!4.57e-14!24;UBERON:0008814!4.57e-14!24;UBERON:0009145!4.57e-14!24;UBERON:0001004!2.32e-13!42;UBERON:0000065!8.71e-13!41;UBERON:0002390!8.76e-13!45;UBERON:0003061!8.76e-13!45;UBERON:0000072!1.60e-11!27;UBERON:0002405!8.60e-11!70;UBERON:0005057!2.50e-10!51;UBERON:0001041!7.94e-10!92;UBERON:0000077!1.24e-09!97;UBERON:0000063!5.75e-08!35;UBERON:0004119!1.09e-07!130;UBERON:0000925!1.09e-07!130;UBERON:0006595!1.09e-07!130;UBERON:0003081!1.21e-07!88;UBERON:0001007!1.59e-07!128;UBERON:0001555!1.59e-07!128;UBERON:0007026!1.59e-07!128;UBERON:0005911!1.78e-07!69;UBERON:0004921!4.90e-07!126;UBERON:0004185!4.90e-07!126 | |ontology_enrichment_uberon=UBERON:0004177!5.13e-16!29;UBERON:0003408!1.09e-15!24;UBERON:0002370!4.49e-15!23;UBERON:0000974!4.49e-15!23;UBERON:0004807!4.49e-15!23;UBERON:0005058!4.49e-15!23;UBERON:0003351!4.49e-15!23;UBERON:0009113!4.49e-15!23;UBERON:0003295!4.49e-15!23;UBERON:0009722!4.49e-15!23;UBERON:0005562!4.49e-15!23;UBERON:0007690!4.49e-15!23;UBERON:0002193!3.63e-14!48;UBERON:0006562!4.57e-14!24;UBERON:0001557!4.57e-14!24;UBERON:0001042!4.57e-14!24;UBERON:0008814!4.57e-14!24;UBERON:0009145!4.57e-14!24;UBERON:0001004!2.32e-13!42;UBERON:0000065!8.71e-13!41;UBERON:0002390!8.76e-13!45;UBERON:0003061!8.76e-13!45;UBERON:0000072!1.60e-11!27;UBERON:0002405!8.60e-11!70;UBERON:0005057!2.50e-10!51;UBERON:0001041!7.94e-10!92;UBERON:0000077!1.24e-09!97;UBERON:0000063!5.75e-08!35;UBERON:0004119!1.09e-07!130;UBERON:0000925!1.09e-07!130;UBERON:0006595!1.09e-07!130;UBERON:0003081!1.21e-07!88;UBERON:0001007!1.59e-07!128;UBERON:0001555!1.59e-07!128;UBERON:0007026!1.59e-07!128;UBERON:0005911!1.78e-07!69;UBERON:0004921!4.90e-07!126;UBERON:0004185!4.90e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.12e-36,29;UBERON:0005057,3.12e-36,29;UBERON:0003408,2.67e-34,24;UBERON:0002370,5.79e-33,23;UBERON:0000974,5.79e-33,23;UBERON:0004807,5.79e-33,23;UBERON:0005058,5.79e-33,23;UBERON:0003351,5.79e-33,23;UBERON:0009113,5.79e-33,23;UBERON:0003295,5.79e-33,23;UBERON:0009722,5.79e-33,23;UBERON:0005562,5.79e-33,23;UBERON:0007690,5.79e-33,23;UBERON:0006562,2.36e-31,24;UBERON:0001557,2.36e-31,24;UBERON:0001042,2.36e-31,24;UBERON:0008814,2.36e-31,24;UBERON:0009145,2.36e-31,24;UBERON:0000077,3.11e-31,35;UBERON:0002193,1.41e-29,48;UBERON:0002405,1.41e-29,48;UBERON:0002390,1.42e-29,45;UBERON:0003061,1.42e-29,45;UBERON:0001004,7.62e-29,42;UBERON:0000065,1.42e-27,41;UBERON:0000072,3.05e-27,27;UBERON:0007811,6.50e-21,36;UBERON:0001041,6.44e-18,80;UBERON:0000153,1.42e-16,43;UBERON:0005911,8.25e-15,69;UBERON:0003081,9.75e-13,87;UBERON:0003929,9.07e-12,55;UBERON:0004119,3.16e-11,118;UBERON:0000925,3.16e-11,118;UBERON:0006595,3.16e-11,118;UBERON:0004921,4.93e-11,114;UBERON:0001007,1.05e-10,116;UBERON:0001555,1.05e-10,116;UBERON:0007026,1.05e-10,116;UBERON:0002368,2.48e-10,60;UBERON:0002530,4.27e-10,65;UBERON:0000490,6.61e-09,66;UBERON:0000949,1.19e-08,72;UBERON:0000926,5.73e-08,120;UBERON:0004120,5.73e-08,120;UBERON:0006603,5.73e-08,120;UBERON:0001048,1.57e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,73.8585410085816,14.0788722151667,12.4054198950657,8.73211637950075,11.1681022593471,61.4610620453029,48.4309029401246,0.666219523631325,2.83465374345756,0.699561878128147,9.30613387806801,8.08975158273859,3.81950686618227,2.04103896362567,0,0,0.159992422793407,0.68822784320151,0,0,0,0.190023419456374,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,67.458679207055,48.3975070765148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0,0,0,0.893811366596314,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,22.0097201100096,0.890652834388949,0,0,0,0,0,0,0,0.86759614151947,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0.360124259610698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.700592054203017,0,0,0.486412857275134,0.584799949701329,0.219550115291051,0.402619256281115,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,4.24932337383191,0,0,0,0,1.84256883185997,0,0.390267295715598,0.157635144106191,1.32878813789265,0.318909537314974,1.96635977658886,1.38147985492716,1.3018415272336,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,1.17335854031855,0,0,0,0,0,0,0,0.582961673259701,0,4.95525554313773,0,0,1.69531611304222,2.32380187125743,2.97411625168479,0,0,0.138199973804424,0.954670618015114,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,93.2232805853126,1.62180172232131,8.21687657318618,27.5432144712925,40.1019798295158,61.5912199821921,54.4485386325459,64.0972547937665,70.3736156138589,63.1754427169949,74.8130293715357,69.8773004904025,84.1853614352883,96.0728135932497,0,0,0,0,0.19318959403219,1.50145980360946,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0,1.68342681497322,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0,73.8585410085816,14.0788722151667,12.4054198950657,8.73211637950075,11.1681022593471,61.4610620453029,48.4309029401246,0.666219523631325,2.83465374345756,0.699561878128147,9.30613387806801,8.08975158273859,3.81950686618227,2.04103896362567,0,0,0.159992422793407,0.68822784320151,0,0,0,0.190023419456374,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,67.458679207055,48.3975070765148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0,0,0,0.893811366596314,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,2.05530983494308,22.0097201100096,0.890652834388949,0,0,0,0,0,0,0,0.86759614151947,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.497627882440372,0.252722758433675,0,0,0,0.360124259610698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.700592054203017,0,0,0.486412857275134,0.584799949701329,0.219550115291051,0.402619256281115,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,4.24932337383191,0,0,0,0,1.84256883185997,0,0.390267295715598,0.157635144106191,1.32878813789265,0.318909537314974,1.96635977658886,1.38147985492716,1.3018415272336,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,2.65490276679926,0,0.302323556964751,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0.304464949114599,1.17335854031855,0,0,0,0,0,0,0,0.582961673259701,0,4.95525554313773,0,0,1.69531611304222,2.32380187125743,2.97411625168479,0,0,0.138199973804424,0.954670618015114,0,0.406638934253697,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,93.2232805853126,1.62180172232131,8.21687657318618,27.5432144712925,40.1019798295158,61.5912199821921,54.4485386325459,64.0972547937665,70.3736156138589,63.1754427169949,74.8130293715357,69.8773004904025,84.1853614352883,96.0728135932497,0,0,0,0,0.19318959403219,1.50145980360946,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.229741875822453,0,0,0,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0,1.68342681497322,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p1@Sh2d1a | |short_description=p1@Sh2d1a | ||
}} | }} |
Latest revision as of 20:49, 1 October 2015
Short description: | p1@Sh2d1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sh2d1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_NM_011364, uc009tbb.1_5end |
EntrezGene: | Sh2d1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data