FFCP PHASE1:Mm9::chr3:130815382..130815401,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:130815382..130815401,+ to FFCP PHASE1:Mm9::chr3:130815382..130815401,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16842 | |EntrezGene=16842 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C402,Q3TEN5 | |UniProt=Q8C402,Q3TEN5 | ||
|association_with_transcript=-313bp_to_ENSMUST00000098611,ENSMUST00000136147,uc008rji.1,uc008rjj.1,uc008rjk.1_5end | |||
|cluster_id=chr3:130815382..130815401,+ | |||
|description=CAGE_peak_14_at_Lef1_5end | |||
|id=chr3:130815382..130815401,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.23e-08!9;CL:0000789!1.23e-08!9;CL:0002420!1.23e-08!9;CL:0002419!1.23e-08!9;CL:0000790!1.23e-08!9;CL:0000838!1.21e-07!12;CL:0000624!3.25e-07!8;CL:0000542!6.53e-07!13;CL:0000051!6.53e-07!13;CL:0000084!8.86e-07!11;CL:0000827!8.86e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.73e-14,9;CL:0000789,9.73e-14,9;CL:0002420,9.73e-14,9;CL:0002419,9.73e-14,9;CL:0000790,9.73e-14,9;CL:0000084,3.29e-11,11;CL:0000827,3.29e-11,11;CL:0000838,2.94e-10,12;CL:0000624,4.18e-10,8;CL:0000542,1.88e-09,13;CL:0000051,1.88e-09,13;CL:0000738,3.56e-07,17;CL:0002087,3.56e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.60e-19!23;UBERON:0000974!1.60e-19!23;UBERON:0004807!1.60e-19!23;UBERON:0005058!1.60e-19!23;UBERON:0003351!1.60e-19!23;UBERON:0009113!1.60e-19!23;UBERON:0003295!1.60e-19!23;UBERON:0009722!1.60e-19!23;UBERON:0005562!1.60e-19!23;UBERON:0007690!1.60e-19!23;UBERON:0004177!2.36e-19!29;UBERON:0006562!1.83e-18!24;UBERON:0003408!1.83e-18!24;UBERON:0001557!1.83e-18!24;UBERON:0001042!1.83e-18!24;UBERON:0008814!1.83e-18!24;UBERON:0009145!1.83e-18!24;UBERON:0000072!9.17e-16!27;UBERON:0002193!3.80e-14!48;UBERON:0002390!4.45e-14!45;UBERON:0003061!4.45e-14!45;UBERON:0000063!1.48e-13!35;UBERON:0000065!6.83e-12!41;UBERON:0001004!1.85e-11!42;UBERON:0005057!2.80e-09!51;UBERON:0002405!2.91e-08!70;UBERON:0002368!1.14e-07!60;UBERON:0002530!2.14e-07!65;UBERON:0000949!8.06e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.06e-43,23;UBERON:0000974,3.06e-43,23;UBERON:0004807,3.06e-43,23;UBERON:0005058,3.06e-43,23;UBERON:0003351,3.06e-43,23;UBERON:0009113,3.06e-43,23;UBERON:0003295,3.06e-43,23;UBERON:0009722,3.06e-43,23;UBERON:0005562,3.06e-43,23;UBERON:0007690,3.06e-43,23;UBERON:0006562,2.36e-41,24;UBERON:0003408,2.36e-41,24;UBERON:0001557,2.36e-41,24;UBERON:0001042,2.36e-41,24;UBERON:0008814,2.36e-41,24;UBERON:0009145,2.36e-41,24;UBERON:0000072,1.59e-36,27;UBERON:0004177,7.34e-34,29;UBERON:0005057,7.34e-34,29;UBERON:0000077,1.09e-27,35;UBERON:0007811,7.37e-27,36;UBERON:0000065,2.57e-23,41;UBERON:0001004,1.04e-22,42;UBERON:0002193,2.14e-22,48;UBERON:0002405,2.14e-22,48;UBERON:0000153,3.95e-22,43;UBERON:0002390,4.78e-21,45;UBERON:0003061,4.78e-21,45;UBERON:0003929,8.22e-17,55;UBERON:0002368,3.21e-15,60;UBERON:0002530,7.15e-14,65;UBERON:0000490,1.26e-13,66;UBERON:0005911,6.21e-13,69;UBERON:0000949,2.69e-12,72;UBERON:0001041,7.84e-11,80;UBERON:0003081,9.06e-10,87;UBERON:0004921,7.00e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0.422366166455,0.70219357896598,0,0,4.28001824828014,2.71003247498892,0,0,0,0.315462165358238,0.411343300817216,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,5.71359458542189,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.583353565032143,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,1.89606672376907,0.405450430580328,1.23253148597793,2.07873316764472,3.58053391334963,3.17890167650024,2.88469078847925,3.39685912501528,2.22126189885925,2.43861781295999,2.52065462842101,3.21611006441183,2.98256709085021,2.68816875017609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0.422366166455,0.70219357896598,0,0,4.28001824828014,2.71003247498892,0,0,0,0.315462165358238,0.411343300817216,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,5.71359458542189,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.484393280087717,0,0.119372344003136,0.164140899745061,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0.583353565032143,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,1.89606672376907,0.405450430580328,1.23253148597793,2.07873316764472,3.58053391334963,3.17890167650024,2.88469078847925,3.39685912501528,2.22126189885925,2.43861781295999,2.52065462842101,3.21611006441183,2.98256709085021,2.68816875017609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p14@Lef1 | |||
}} | }} |
Latest revision as of 14:56, 1 October 2015
Short description: | p14@Lef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Lef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -313bp_to_ENSMUST00000098611, ENSMUST00000136147, uc008rji.1, uc008rjj.1, uc008rjk.1_5end |
EntrezGene: | Lef1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.73e-14 | 9 |
alpha-beta T cell | 9.73e-14 | 9 |
immature T cell | 9.73e-14 | 9 |
mature T cell | 9.73e-14 | 9 |
immature alpha-beta T cell | 9.73e-14 | 9 |
T cell | 3.29e-11 | 11 |
pro-T cell | 3.29e-11 | 11 |
lymphoid lineage restricted progenitor cell | 2.94e-10 | 12 |
CD4-positive, alpha-beta T cell | 4.18e-10 | 8 |
lymphocyte | 1.88e-09 | 13 |
common lymphoid progenitor | 1.88e-09 | 13 |
leukocyte | 3.56e-07 | 17 |
nongranular leukocyte | 3.56e-07 | 17 |