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FFCP PHASE1:Mm9::chr6:57531119..57531132,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:57531119..57531132,+
|DHSsupport=NA
|short_description=p4@Herc6
|DPIdataset=NA
|description=CAGE_peak_4_at_Herc6_5end
|association_with_transcript=133bp_to_uc009cci.2_5end
|EntrezGene=67138
|EntrezGene=67138
|HGNC=
|HGNC=
|MCL_coexpression_id=123
|TSSclassifier=NA
|UniProt=Q3UEA7
|UniProt=Q3UEA7
|association_with_transcript=133bp_to_uc009cci.2_5end
|cluster_id=chr6:57531119..57531132,+
|description=CAGE_peak_4_at_Herc6_5end
|id=chr6:57531119..57531132,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.74e-10!29;UBERON:0002370!3.36e-08!23;UBERON:0000974!3.36e-08!23;UBERON:0004807!3.36e-08!23;UBERON:0005058!3.36e-08!23;UBERON:0003351!3.36e-08!23;UBERON:0009113!3.36e-08!23;UBERON:0003295!3.36e-08!23;UBERON:0009722!3.36e-08!23;UBERON:0005562!3.36e-08!23;UBERON:0007690!3.36e-08!23;UBERON:0006562!5.62e-08!24;UBERON:0001557!5.62e-08!24;UBERON:0001042!5.62e-08!24;UBERON:0008814!5.62e-08!24;UBERON:0009145!5.62e-08!24;UBERON:0000065!9.23e-08!41;UBERON:0003408!2.13e-07!24;UBERON:0001004!3.23e-07!42;UBERON:0002193!5.79e-07!48;UBERON:0005057!6.68e-07!51;UBERON:0002390!9.69e-07!45;UBERON:0003061!9.69e-07!45;UBERON:0004921!9.86e-07!126;UBERON:0004185!9.86e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.85e-23,29;UBERON:0005057,4.85e-23,29;UBERON:0002193,8.13e-21,48;UBERON:0002405,8.13e-21,48;UBERON:0000077,1.60e-20,35;UBERON:0002390,2.84e-20,45;UBERON:0003061,2.84e-20,45;UBERON:0002370,1.84e-18,23;UBERON:0000974,1.84e-18,23;UBERON:0004807,1.84e-18,23;UBERON:0005058,1.84e-18,23;UBERON:0003351,1.84e-18,23;UBERON:0009113,1.84e-18,23;UBERON:0003295,1.84e-18,23;UBERON:0009722,1.84e-18,23;UBERON:0005562,1.84e-18,23;UBERON:0007690,1.84e-18,23;UBERON:0006562,1.52e-17,24;UBERON:0003408,1.52e-17,24;UBERON:0001557,1.52e-17,24;UBERON:0001042,1.52e-17,24;UBERON:0008814,1.52e-17,24;UBERON:0009145,1.52e-17,24;UBERON:0000072,3.35e-15,27;UBERON:0003081,3.84e-13,87;UBERON:0000065,1.59e-11,41;UBERON:0001004,3.71e-11,42;UBERON:0007811,1.55e-10,36;UBERON:0001041,4.13e-10,80;UBERON:0003929,6.50e-09,55;UBERON:0000926,1.18e-08,120;UBERON:0004120,1.18e-08,120;UBERON:0006603,1.18e-08,120;UBERON:0000153,2.83e-08,43;UBERON:0005911,4.67e-08,69;UBERON:0002368,7.81e-08,60;UBERON:0004921,9.66e-08,114;UBERON:0001007,1.67e-07,116;UBERON:0001555,1.67e-07,116;UBERON:0007026,1.67e-07,116;UBERON:0004119,2.82e-07,118;UBERON:0000925,2.82e-07,118;UBERON:0006595,2.82e-07,118;UBERON:0001048,4.44e-07,134;UBERON:0002530,6.31e-07,65;UBERON:0000490,9.22e-07,66
|phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0.500895729946347,0.33575854382378,0.467225281191051,2.1950964985068,0.422366166455,0.70219357896598,0.68487187290202,0.159544317990673,3.42401459862411,2.62261207256992,0.333109761815663,0.607425802169478,2.09868563438444,1.10411757875383,1.09691546884591,0.42438965179803,0.510259740906419,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0.86152399231815,0.215471232685889,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0.838913030288682,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.45839474333043,0.294628585473668,0,0,0.151452386666368,0.151143120213571,1.44932244350839,1.72084775396277,0.679971333707751,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.68510327831436,3.36619248741323,0.445326417194474,0.173485326766136,0,0,0.452167921657868,0.705532242814229,0.376999773989026,0.247194967734374,0.86759614151947,1.76922110389975,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0.254140454146129,0.299581278809645,0,0.125654352112864,0.347648640384553,0.767146371990992,0.41557608911912,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0,0.390361328888111,0.229902104433473,0.540186389416048,0.60281927134286,0.272145996605311,0.2562274405697,0,0,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,1.03562886267751,0,1.2604344302271,0.23674473558521,0.393528463494808,0.617068451549513,0,1.07309360559848,0.233530684734339,0,0,0.162137619091711,0,0.878200461164203,0.134206418760372,0.210289948564127,0,1.32167513193519,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,1.1937388322469,1.36474860983384,0.898819408654221,0,0.398282546508734,0.189667900953082,0.685491075658373,1.1270773567308,0.203651327845314,0.969762435838129,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0.372140947668503,1.24815069245824,0.757736633841335,0.358794827043824,0.482443521363367,1.10851914099963,0.37898282354097,0.325929952884052,1.01847051465113,0.469380496577004,0.335012514883631,0.714130922658041,0.585400943573396,0.472905432318573,0.664394068946325,0,0.163863314715738,0.172684981865896,0.433947175744535,0,1.08781136763742,0.491764273019036,0.551873492609465,0.160550589987792,0.117211686592203,0,0,0,0,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0,0,0.567760340833074,0,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0.661585194164886,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,0.370850604021019,1.19609616558497,0.206386867963223,1.11116716421827,1.50694765603753,1.23024804948923,0.457556346413045,0.339956859987711,0.69975726161829,0.690999869022119,0,0.316335993581135,0,0.216010681643603,0.836353184057875,0.436725127492355,0,0.247960367176008,0,0,0,0,0.598066184175915,0,1.55560950675238,0.129159823477731,0.506868376472335,0.938857909166032,0.5208175393758,0.629156066554265,0.724752362478018,0,4.4241556887945,0.405450430580328,0.718976700153791,1.94881234466693,2.32734704367726,2.38417625737518,2.16351809135944,2.06765338044408,2.22126189885925,2.057583779685,2.82313318383153,3.11865218367208,3.55983814069219,2.80504565235765,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.375364950902364,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0.51776031175182,0.62272408550506,0.399024873401031,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0,0,0,0.342869252385415,0.532427418478012,0.715308569841963,0.726732083161643,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0,0,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421
|phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0.500895729946347,0.33575854382378,0.467225281191051,2.1950964985068,0.422366166455,0.70219357896598,0.68487187290202,0.159544317990673,3.42401459862411,2.62261207256992,0.333109761815663,0.607425802169478,2.09868563438444,1.10411757875383,1.09691546884591,0.42438965179803,0.510259740906419,0,0.261199789138935,0.159992422793407,0.22940928106717,0,0.86152399231815,0.215471232685889,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,0,0.838913030288682,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.45839474333043,0.294628585473668,0,0,0.151452386666368,0.151143120213571,1.44932244350839,1.72084775396277,0.679971333707751,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.68510327831436,3.36619248741323,0.445326417194474,0.173485326766136,0,0,0.452167921657868,0.705532242814229,0.376999773989026,0.247194967734374,0.86759614151947,1.76922110389975,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,0,0,0.254140454146129,0.299581278809645,0,0.125654352112864,0.347648640384553,0.767146371990992,0.41557608911912,0.162241263067758,0.101839363850316,0.373220911830279,0.252722758433675,0,0.390361328888111,0.229902104433473,0.540186389416048,0.60281927134286,0.272145996605311,0.2562274405697,0,0,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0.348252166522167,0.61734640922383,0,0,0,0,1.03562886267751,0,1.2604344302271,0.23674473558521,0.393528463494808,0.617068451549513,0,1.07309360559848,0.233530684734339,0,0,0.162137619091711,0,0.878200461164203,0.134206418760372,0.210289948564127,0,1.32167513193519,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,1.1937388322469,1.36474860983384,0.898819408654221,0,0.398282546508734,0.189667900953082,0.685491075658373,1.1270773567308,0.203651327845314,0.969762435838129,0.210407459670956,0.126473074248515,0.147610147979602,0.31399745568275,0,0,0.333690211432188,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.549122826376163,0,0.372140947668503,1.24815069245824,0.757736633841335,0.358794827043824,0.482443521363367,1.10851914099963,0.37898282354097,0.325929952884052,1.01847051465113,0.469380496577004,0.335012514883631,0.714130922658041,0.585400943573396,0.472905432318573,0.664394068946325,0,0.163863314715738,0.172684981865896,0.433947175744535,0,1.08781136763742,0.491764273019036,0.551873492609465,0.160550589987792,0.117211686592203,0,0,0,0,0,0.477937595905104,0.222798674082394,0,0.404810701674894,0,0,0,0.567760340833074,0,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0.661585194164886,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0.582961673259701,0.370850604021019,1.19609616558497,0.206386867963223,1.11116716421827,1.50694765603753,1.23024804948923,0.457556346413045,0.339956859987711,0.69975726161829,0.690999869022119,0,0.316335993581135,0,0.216010681643603,0.836353184057875,0.436725127492355,0,0.247960367176008,0,0,0,0,0.598066184175915,0,1.55560950675238,0.129159823477731,0.506868376472335,0.938857909166032,0.5208175393758,0.629156066554265,0.724752362478018,0,4.4241556887945,0.405450430580328,0.718976700153791,1.94881234466693,2.32734704367726,2.38417625737518,2.16351809135944,2.06765338044408,2.22126189885925,2.057583779685,2.82313318383153,3.11865218367208,3.55983814069219,2.80504565235765,0.226730383615211,0.221985953374065,0,0,0.386379188064381,0.375364950902364,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0.51776031175182,0.62272408550506,0.399024873401031,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.347652977834566,0,0,0,0.342869252385415,0.532427418478012,0.715308569841963,0.726732083161643,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0,0,0.499621155875892,0.467863216890817,0,0,0,0.231867835620421
|short_description=p4@Herc6
}}
}}

Latest revision as of 14:37, 1 October 2015

Short description:p4@Herc6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Herc6_5end
Coexpression cluster:MCL_coexpression_mm9:123
Association with transcript: 133bp_to_uc009cci.2_5end
EntrezGene:Herc6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Herc6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A23.12
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ4.85e-2329
immune organ4.85e-2329
hemolymphoid system8.13e-2148
immune system8.13e-2148
mixed endoderm/mesoderm-derived structure1.60e-2035
hematopoietic system2.84e-2045
blood island2.84e-2045
thymus1.84e-1823
neck1.84e-1823
respiratory system epithelium1.84e-1823
hemolymphoid system gland1.84e-1823
pharyngeal epithelium1.84e-1823
thymic region1.84e-1823
pharyngeal gland1.84e-1823
entire pharyngeal arch endoderm1.84e-1823
thymus primordium1.84e-1823
early pharyngeal endoderm1.84e-1823
pharynx1.52e-1724
gland of gut1.52e-1724
upper respiratory tract1.52e-1724
chordate pharynx1.52e-1724
pharyngeal arch system1.52e-1724
pharyngeal region of foregut1.52e-1724
segment of respiratory tract3.35e-1527
lateral plate mesoderm3.84e-1387
respiratory tract1.59e-1141
respiratory system3.71e-1142
craniocervical region1.55e-1036
foregut4.13e-1080
gut epithelium6.50e-0955
mesoderm1.18e-08120
mesoderm-derived structure1.18e-08120
presumptive mesoderm1.18e-08120
anterior region of body2.83e-0843
endo-epithelium4.67e-0869
endocrine gland7.81e-0860
subdivision of digestive tract9.66e-08114
digestive system1.67e-07116
digestive tract1.67e-07116
primitive gut1.67e-07116
endoderm-derived structure2.82e-07118
endoderm2.82e-07118
presumptive endoderm2.82e-07118
primordium4.44e-07134
gland6.31e-0765
unilaminar epithelium9.22e-0766
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