Personal tools

FFCP PHASE1:Mm9::chr13:24506973..24506992,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12763
|EntrezGene=12763
|HGNC=
|HGNC=
|MCL_coexpression_id=18
|MCL_coexpression_id=18
|TSSclassifier=NA
|UniProt=Q61419,Q3TLI9
|UniProt=Q61419,Q3TLI9
|association_with_transcript=0bp_to_ENSMUST00000110390,ENSMUST00000110391,NM_007717,uc007pvt.2,uc011yxm.1,uc011yxn.1_5end
|association_with_transcript=0bp_to_ENSMUST00000110390,ENSMUST00000110391,NM_007717,uc007pvt.2,uc011yxm.1,uc011yxn.1_5end
|cluster_id=chr13:24506973..24506992,+
|description=CAGE_peak_3_at_Cmah_5end
|description=CAGE_peak_3_at_Cmah_5end
|id=chr13:24506973..24506992,+
|id=chr13:24506973..24506992,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000553,8.41e-10,6;CL:0000556,8.41e-10,6;CL:0002031,7.48e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.45e-11!48;UBERON:0004177!3.33e-11!29;UBERON:0002405!8.87e-10!70;UBERON:0002390!1.38e-09!45;UBERON:0003061!1.38e-09!45;UBERON:0003408!9.55e-09!24;UBERON:0005057!1.66e-08!51;UBERON:0002370!3.25e-08!23;UBERON:0000974!3.25e-08!23;UBERON:0004807!3.25e-08!23;UBERON:0005058!3.25e-08!23;UBERON:0003351!3.25e-08!23;UBERON:0009113!3.25e-08!23;UBERON:0003295!3.25e-08!23;UBERON:0009722!3.25e-08!23;UBERON:0005562!3.25e-08!23;UBERON:0007690!3.25e-08!23;UBERON:0000077!6.54e-08!97;UBERON:0001041!6.90e-08!92;UBERON:0001007!7.30e-08!128;UBERON:0001555!7.30e-08!128;UBERON:0007026!7.30e-08!128;UBERON:0004119!1.03e-07!130;UBERON:0000925!1.03e-07!130;UBERON:0006595!1.03e-07!130;UBERON:0001004!1.54e-07!42;UBERON:0006562!1.55e-07!24;UBERON:0001557!1.55e-07!24;UBERON:0001042!1.55e-07!24;UBERON:0008814!1.55e-07!24;UBERON:0009145!1.55e-07!24;UBERON:0004921!4.22e-07!126;UBERON:0004185!4.22e-07!126;UBERON:0000065!4.31e-07!41
|ontology_enrichment_uberon=UBERON:0002193!2.45e-11!48;UBERON:0004177!3.33e-11!29;UBERON:0002405!8.87e-10!70;UBERON:0002390!1.38e-09!45;UBERON:0003061!1.38e-09!45;UBERON:0003408!9.55e-09!24;UBERON:0005057!1.66e-08!51;UBERON:0002370!3.25e-08!23;UBERON:0000974!3.25e-08!23;UBERON:0004807!3.25e-08!23;UBERON:0005058!3.25e-08!23;UBERON:0003351!3.25e-08!23;UBERON:0009113!3.25e-08!23;UBERON:0003295!3.25e-08!23;UBERON:0009722!3.25e-08!23;UBERON:0005562!3.25e-08!23;UBERON:0007690!3.25e-08!23;UBERON:0000077!6.54e-08!97;UBERON:0001041!6.90e-08!92;UBERON:0001007!7.30e-08!128;UBERON:0001555!7.30e-08!128;UBERON:0007026!7.30e-08!128;UBERON:0004119!1.03e-07!130;UBERON:0000925!1.03e-07!130;UBERON:0006595!1.03e-07!130;UBERON:0001004!1.54e-07!42;UBERON:0006562!1.55e-07!24;UBERON:0001557!1.55e-07!24;UBERON:0001042!1.55e-07!24;UBERON:0008814!1.55e-07!24;UBERON:0009145!1.55e-07!24;UBERON:0004921!4.22e-07!126;UBERON:0004185!4.22e-07!126;UBERON:0000065!4.31e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.22e-19,48;UBERON:0002405,2.22e-19,48;UBERON:0002390,3.27e-16,45;UBERON:0003061,3.27e-16,45;UBERON:0004177,1.17e-15,29;UBERON:0005057,1.17e-15,29;UBERON:0003408,1.91e-13,24;UBERON:0002370,1.65e-12,23;UBERON:0000974,1.65e-12,23;UBERON:0004807,1.65e-12,23;UBERON:0005058,1.65e-12,23;UBERON:0003351,1.65e-12,23;UBERON:0009113,1.65e-12,23;UBERON:0003295,1.65e-12,23;UBERON:0009722,1.65e-12,23;UBERON:0005562,1.65e-12,23;UBERON:0007690,1.65e-12,23;UBERON:0000077,6.49e-12,35;UBERON:0006562,8.63e-12,24;UBERON:0001557,8.63e-12,24;UBERON:0001042,8.63e-12,24;UBERON:0008814,8.63e-12,24;UBERON:0009145,8.63e-12,24;UBERON:0001004,7.46e-11,42;UBERON:0000065,4.28e-10,41;UBERON:0000072,5.79e-10,27;UBERON:0001041,2.62e-09,80;UBERON:0003081,6.07e-09,87;UBERON:0001007,7.90e-09,116;UBERON:0001555,7.90e-09,116;UBERON:0007026,7.90e-09,116;UBERON:0004119,1.69e-08,118;UBERON:0000925,1.69e-08,118;UBERON:0006595,1.69e-08,118;UBERON:0004921,1.05e-07,114;UBERON:0007811,2.37e-07,36
|phase1_expression=0,1.04692622291808,0,0,0,0,0,1.29123323441576,2.25261955442667,1.17032263160997,0.856089841127525,0.159544317990673,1.54080656938085,0.0874204024189974,13.9906099962578,29.5613890389146,5.59649502502517,150.159990710521,162.069260521983,96.3364509581529,0.510259740906419,0.0992909512008853,0,6.55968933452967,5.50582274561208,0,0,0,0.570070258369122,0.756090389279792,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,101.005128846757,5.80289713609076,13.779845764841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,2.38755514223978,0.170430322578058,0,0,0,0,0,0,0,0,0,3.76806803072898,131.281507009116,0.148442139064825,0,0,0,0,0,0.376999773989026,0,8.6759614151947,5.30766331169925,0,6.40440403535141,5.33362778448744,0,0,0,4.85368404896324,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,10.2013715900276,0.505445516867349,0.841767423545896,0,0,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0.492502392237286,0.405344047729279,0.438599962275997,0.878200461164203,1.07365135008297,0,0,0.991256348951394,1.32225283331772,0,0,0,0,0,0,0.474529061544512,0,1.00534083520108,0.596869416123452,1.55971269695296,3.59527763461689,0,0.796565093017469,0,0,0,0,0,0,0,0.590440591918409,0,0.493588655687202,0,1.00107063429656,0.393117990226406,0,0.405720242777006,0,0,0.575392274901621,2.7562988551756,0.274561413188081,4.31304619582064,0.372140947668503,1.5601883655728,0.757736633841335,0.717589654087649,0,10.3461786493299,0,0.162964976442026,0,0,0.502518772325447,0,0.195133647857799,0.945810864637146,0.44292937929755,1.75400245523236,5.89907932976657,5.69860440157455,6.79850575333104,0,0,1.47529281905711,2.48343071674259,0,0.117211686592203,0,0.757412781613119,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0.661585194164886,8.90385765883992,0.645857706783622,1.14594557363496,2.626191568069,12.9671310798598,1.7488850197791,0,26.655857404465,0.619160603889667,0.370389054739423,6.02779062415011,24.3315725343425,24.7080427063044,0.169978429993855,0.419854356970974,0.829199842826543,0,0,0.203319467126849,0,0,0.436725127492355,0.269728692769641,0.991841468704031,1.04702376793612,1.8146096260851,4.34937519160848,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,3.79213344753814,1.01362607645082,3.28675062927447,7.53540773271211,8.05620130503666,9.33802367471945,4.80781798079875,6.05527061415767,5.04832249740738,8.76378276532498,4.13387359061046,4.58052039476836,3.2712026157712,10.9864288050675,0,0,0,0,0.965947970160952,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.754505365544305,0.187283014939765,0.384150914429216,0.17230640686684,0,0.579421629724277,0.77163688185482,0.824171801606613,0,0.685738504770831,0.532427418478012,0,0.872078499793971,0.0941093804153306,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,0,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,1.10295709559758,1.62307484934295
|phase1_expression=0,1.04692622291808,0,0,0,0,0,1.29123323441576,2.25261955442667,1.17032263160997,0.856089841127525,0.159544317990673,1.54080656938085,0.0874204024189974,13.9906099962578,29.5613890389146,5.59649502502517,150.159990710521,162.069260521983,96.3364509581529,0.510259740906419,0.0992909512008853,0,6.55968933452967,5.50582274561208,0,0,0,0.570070258369122,0.756090389279792,0,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,101.005128846757,5.80289713609076,13.779845764841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,2.38755514223978,0.170430322578058,0,0,0,0,0,0,0,0,0,3.76806803072898,131.281507009116,0.148442139064825,0,0,0,0,0,0.376999773989026,0,8.6759614151947,5.30766331169925,0,6.40440403535141,5.33362778448744,0,0,0,4.85368404896324,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,10.2013715900276,0.505445516867349,0.841767423545896,0,0,0,0,0,0,0.187403449119458,0.776110112217047,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0.492502392237286,0.405344047729279,0.438599962275997,0.878200461164203,1.07365135008297,0,0,0.991256348951394,1.32225283331772,0,0,0,0,0,0,0.474529061544512,0,1.00534083520108,0.596869416123452,1.55971269695296,3.59527763461689,0,0.796565093017469,0,0,0,0,0,0,0,0.590440591918409,0,0.493588655687202,0,1.00107063429656,0.393117990226406,0,0.405720242777006,0,0,0.575392274901621,2.7562988551756,0.274561413188081,4.31304619582064,0.372140947668503,1.5601883655728,0.757736633841335,0.717589654087649,0,10.3461786493299,0,0.162964976442026,0,0,0.502518772325447,0,0.195133647857799,0.945810864637146,0.44292937929755,1.75400245523236,5.89907932976657,5.69860440157455,6.79850575333104,0,0,1.47529281905711,2.48343071674259,0,0.117211686592203,0,0.757412781613119,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0.356497378384721,1.8962205476149,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0.661585194164886,8.90385765883992,0.645857706783622,1.14594557363496,2.626191568069,12.9671310798598,1.7488850197791,0,26.655857404465,0.619160603889667,0.370389054739423,6.02779062415011,24.3315725343425,24.7080427063044,0.169978429993855,0.419854356970974,0.829199842826543,0,0,0.203319467126849,0,0,0.436725127492355,0.269728692769641,0.991841468704031,1.04702376793612,1.8146096260851,4.34937519160848,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,3.79213344753814,1.01362607645082,3.28675062927447,7.53540773271211,8.05620130503666,9.33802367471945,4.80781798079875,6.05527061415767,5.04832249740738,8.76378276532498,4.13387359061046,4.58052039476836,3.2712026157712,10.9864288050675,0,0,0,0,0.965947970160952,0.750729901804728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0,0.754505365544305,0.187283014939765,0.384150914429216,0.17230640686684,0,0.579421629724277,0.77163688185482,0.824171801606613,0,0.685738504770831,0.532427418478012,0,0.872078499793971,0.0941093804153306,0.761531471025089,0.365855945745545,0.526139422875686,0.543216455383447,0,0.355905054372522,0.591026894253381,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,1.10295709559758,1.62307484934295
|short_description=p3@Cmah
|short_description=p3@Cmah
}}
}}

Latest revision as of 07:39, 27 September 2015

Short description:p3@Cmah
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cmah_5end
Coexpression cluster:MCL_coexpression_mm9:18
Association with transcript: 0bp_to_ENSMUST00000110390, ENSMUST00000110391, NM_007717, uc007pvt.2, uc011yxm.1, uc011yxn.1_5end
EntrezGene:Cmah
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cmah

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.56
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2150.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4162.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A696.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2101.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H9131.28
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H18.68
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.20
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B110.35
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C412.97
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G226.66
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H124.33
spleen, neonate N25.CNhs11099.1354-25G324.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C57.54
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G49.34
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D38.76
thymus, neonate N10.CNhs11194.748-24E44.13
thymus, neonate N20.CNhs11186.820-7A24.58
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G210.99
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
megakaryocyte progenitor cell8.41e-106
megakaryocyte8.41e-106
hematopoietic lineage restricted progenitor cell7.48e-0725

Uber anatomy
Ontology termp-valuen
hemolymphoid system2.22e-1948
immune system2.22e-1948
hematopoietic system3.27e-1645
blood island3.27e-1645
hemopoietic organ1.17e-1529
immune organ1.17e-1529
gland of gut1.91e-1324
thymus1.65e-1223
neck1.65e-1223
respiratory system epithelium1.65e-1223
hemolymphoid system gland1.65e-1223
pharyngeal epithelium1.65e-1223
thymic region1.65e-1223
pharyngeal gland1.65e-1223
entire pharyngeal arch endoderm1.65e-1223
thymus primordium1.65e-1223
early pharyngeal endoderm1.65e-1223
mixed endoderm/mesoderm-derived structure6.49e-1235
pharynx8.63e-1224
upper respiratory tract8.63e-1224
chordate pharynx8.63e-1224
pharyngeal arch system8.63e-1224
pharyngeal region of foregut8.63e-1224
respiratory system7.46e-1142
respiratory tract4.28e-1041
segment of respiratory tract5.79e-1027
foregut2.62e-0980
lateral plate mesoderm6.07e-0987
digestive system7.90e-09116
digestive tract7.90e-09116
primitive gut7.90e-09116
endoderm-derived structure1.69e-08118
endoderm1.69e-08118
presumptive endoderm1.69e-08118
subdivision of digestive tract1.05e-07114
craniocervical region2.37e-0736
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:24506973..24506992,%2B&oldid=4299778"