FFCP PHASE1:Mm9::chr1:58859336..58859361,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12370 | |EntrezGene=12370 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt=O89110,Q3U607 | |UniProt=O89110,Q3U607 | ||
|association_with_transcript=0bp_to_ENSMUST00000165549,NM_001080126,uc007bct.1_5end | |association_with_transcript=0bp_to_ENSMUST00000165549,NM_001080126,uc007bct.1_5end | ||
|cluster_id=chr1:58859336..58859361,+ | |||
|description=CAGE_peak_6_at_Casp8_5end | |description=CAGE_peak_6_at_Casp8_5end | ||
|id=chr1:58859336..58859361,+ | |id=chr1:58859336..58859361,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.89e-10!32;CL:0002032!2.89e-10!32;CL:0000037!2.89e-10!32;CL:0000566!2.89e-10!32;CL:0000837!2.89e-10!32;CL:0000838!1.98e-08!12;CL:0002031!6.08e-08!25;CL:0000084!9.48e-08!11;CL:0000827!9.48e-08!11;CL:0000542!2.80e-07!13;CL:0000051!2.80e-07!13;CL:0000063!3.61e-07!66;CL:0000791!7.51e-07!9;CL:0000789!7.51e-07!9;CL:0002420!7.51e-07!9;CL:0002419!7.51e-07!9;CL:0000790!7.51e-07!9 | |ontology_enrichment_celltype=CL:0000988!2.89e-10!32;CL:0002032!2.89e-10!32;CL:0000037!2.89e-10!32;CL:0000566!2.89e-10!32;CL:0000837!2.89e-10!32;CL:0000838!1.98e-08!12;CL:0002031!6.08e-08!25;CL:0000084!9.48e-08!11;CL:0000827!9.48e-08!11;CL:0000542!2.80e-07!13;CL:0000051!2.80e-07!13;CL:0000063!3.61e-07!66;CL:0000791!7.51e-07!9;CL:0000789!7.51e-07!9;CL:0002420!7.51e-07!9;CL:0002419!7.51e-07!9;CL:0000790!7.51e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.78e-18,32;CL:0002032,7.78e-18,32;CL:0000037,7.78e-18,32;CL:0000837,7.78e-18,32;CL:0002031,6.36e-13,25;CL:0000838,8.15e-13,12;CL:0002320,2.08e-12,46;CL:0000134,2.08e-12,46;CL:0000738,1.32e-11,17;CL:0002087,1.32e-11,17;CL:0000542,1.40e-11,13;CL:0000051,1.40e-11,13;CL:0000084,1.45e-11,11;CL:0000827,1.45e-11,11;CL:0000791,7.16e-10,9;CL:0000789,7.16e-10,9;CL:0002420,7.16e-10,9;CL:0002419,7.16e-10,9;CL:0000790,7.16e-10,9;CL:0000219,1.81e-09,54;CL:0000624,1.34e-08,8;CL:0000049,5.41e-08,19;CL:0000239,1.76e-07,6;CL:0000677,1.76e-07,6;CL:0000584,1.76e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.06e-13!48;UBERON:0002405!3.90e-12!70;UBERON:0002390!2.16e-11!45;UBERON:0003061!2.16e-11!45;UBERON:0005911!5.08e-10!69;UBERON:0001007!9.49e-10!128;UBERON:0001555!9.49e-10!128;UBERON:0007026!9.49e-10!128;UBERON:0004119!1.12e-09!130;UBERON:0000925!1.12e-09!130;UBERON:0006595!1.12e-09!130;UBERON:0004921!7.00e-09!126;UBERON:0004185!7.00e-09!126;UBERON:0000344!1.05e-08!15;UBERON:0004923!2.61e-08!24;UBERON:0003929!5.37e-08!55;UBERON:0004177!1.71e-07!29;UBERON:0001242!1.95e-07!13;UBERON:0000060!1.95e-07!13;UBERON:0001262!1.95e-07!13;UBERON:0004786!1.95e-07!13 | |ontology_enrichment_uberon=UBERON:0002193!3.06e-13!48;UBERON:0002405!3.90e-12!70;UBERON:0002390!2.16e-11!45;UBERON:0003061!2.16e-11!45;UBERON:0005911!5.08e-10!69;UBERON:0001007!9.49e-10!128;UBERON:0001555!9.49e-10!128;UBERON:0007026!9.49e-10!128;UBERON:0004119!1.12e-09!130;UBERON:0000925!1.12e-09!130;UBERON:0006595!1.12e-09!130;UBERON:0004921!7.00e-09!126;UBERON:0004185!7.00e-09!126;UBERON:0000344!1.05e-08!15;UBERON:0004923!2.61e-08!24;UBERON:0003929!5.37e-08!55;UBERON:0004177!1.71e-07!29;UBERON:0001242!1.95e-07!13;UBERON:0000060!1.95e-07!13;UBERON:0001262!1.95e-07!13;UBERON:0004786!1.95e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.20e-19,48;UBERON:0002405,7.20e-19,48;UBERON:0002390,1.09e-15,45;UBERON:0003061,1.09e-15,45;UBERON:0002384,2.08e-12,46;UBERON:0004923,1.77e-11,24;UBERON:0000344,7.26e-11,15;UBERON:0004177,5.46e-10,29;UBERON:0005057,5.46e-10,29;UBERON:0001242,1.15e-08,13;UBERON:0001262,1.15e-08,13;UBERON:0004786,1.15e-08,13;UBERON:0000077,1.38e-08,35;UBERON:0001007,2.10e-08,116;UBERON:0001555,2.10e-08,116;UBERON:0007026,2.10e-08,116;UBERON:0004119,4.45e-08,118;UBERON:0000925,4.45e-08,118;UBERON:0006595,4.45e-08,118;UBERON:0003408,6.41e-08,24;UBERON:0000160,9.97e-08,31;UBERON:0004921,2.80e-07,114;UBERON:0002370,3.69e-07,23;UBERON:0000974,3.69e-07,23;UBERON:0004807,3.69e-07,23;UBERON:0005058,3.69e-07,23;UBERON:0003351,3.69e-07,23;UBERON:0009113,3.69e-07,23;UBERON:0003295,3.69e-07,23;UBERON:0009722,3.69e-07,23;UBERON:0005562,3.69e-07,23;UBERON:0007690,3.69e-07,23;UBERON:0005409,5.03e-07,47 | |||
|phase1_expression=0,8.02643437570531,7.73498706962211,3.93203474698879,3.50627010962443,2.85394762250213,2.56973904655078,26.7285279524063,7.74337971834167,4.68129052643987,2.05461561870606,0.558405112967355,37.8353613147965,28.8487327982691,0.666219523631325,4.85940641735582,0.699561878128147,15.1421839371954,14.671244395814,12.3072999021429,0.510259740906419,2.48227378002213,3.39559725880616,7.03966660290989,6.65286915094793,4.01962374880514,9.47676391549965,7.75696437669201,4.3705386474966,4.03248207615889,6.43018480900384,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,1.67412652294763,0.7813353445238,3.14114246384279,2.35292595212406,1.36609096991689,0,0,0,0,0,0,0,0,0,0,8.89247812106003,15.9579671242496,11.0910953717013,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0,5.2175607966302,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,36.7691794778984,0.29688427812965,0,0,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,4.08731288333746,3.83408398418945,3.59941638596045,4.57452817463033,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0.324482526135515,0.203678727700633,1.61729061793121,0.252722758433675,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,5.61770549850588,4.37491442095016,2.27330799516474,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,24.1205711578173,5.02456076660734,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,1.89811624617805,0,0.251335208800269,0.198956472041151,0.38992817423824,4.49409704327111,2.37751854862164,2.19055400579804,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0,0.296452627087149,0.333690211432188,0,0,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.486405680325106,0.274561413188081,0,0.744281895337007,0.936113019343682,0.505157755894224,0.538192240565737,0.482443521363367,2.58654466233247,0,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,0.945810864637146,0.44292937929755,0.478364305972461,2.45794972073607,0.863424909329478,1.3018415272336,3.01582567878545,9.24639662491806,0,1.37968373152366,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0.704015124191131,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,1.45740418314925,0,4.27177201994632,0,1.29636169158798,1.88368457004691,3.41735569302563,1.83022538565218,1.69978429993855,3.21888340344413,3.04039942369732,0,0,0,0.324016022465404,0,0,0.269728692769641,0.330613822901344,0,0.518459893167171,3.72803587852155,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,4.4241556887945,0.202725215290164,0.308132871494482,0.389762468933385,0.358053391334963,0.993406773906324,1.68273629327956,1.62458479892035,1.61546319917036,1.143102099825,2.41982844328417,3.70339946811059,3.07877893249054,2.92192255453922,0.226730383615211,0,0,0,0,0.93841237725591,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.561849044819294,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0.382576664137687,0.661774257358546,0.927471342481686 | |phase1_expression=0,8.02643437570531,7.73498706962211,3.93203474698879,3.50627010962443,2.85394762250213,2.56973904655078,26.7285279524063,7.74337971834167,4.68129052643987,2.05461561870606,0.558405112967355,37.8353613147965,28.8487327982691,0.666219523631325,4.85940641735582,0.699561878128147,15.1421839371954,14.671244395814,12.3072999021429,0.510259740906419,2.48227378002213,3.39559725880616,7.03966660290989,6.65286915094793,4.01962374880514,9.47676391549965,7.75696437669201,4.3705386474966,4.03248207615889,6.43018480900384,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,1.67412652294763,0.7813353445238,3.14114246384279,2.35292595212406,1.36609096991689,0,0,0,0,0,0,0,0,0,0,8.89247812106003,15.9579671242496,11.0910953717013,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,1.4209602298922,0,0,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.151452386666368,0,5.2175607966302,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,2.2836775943812,36.7691794778984,0.29688427812965,0,0,0,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,4.08731288333746,3.83408398418945,3.59941638596045,4.57452817463033,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0,0.324482526135515,0.203678727700633,1.61729061793121,0.252722758433675,0,0,0,0,0,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,5.61770549850588,4.37491442095016,2.27330799516474,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,24.1205711578173,5.02456076660734,0,0,0.257734922644187,0,0.22237804384487,0.190225626112559,1.89811624617805,0,0.251335208800269,0.198956472041151,0.38992817423824,4.49409704327111,2.37751854862164,2.19055400579804,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0.31399745568275,0,0.296452627087149,0.333690211432188,0,0,0.405720242777006,0.241177159752417,0.50925170356284,0.863088412352432,0.486405680325106,0.274561413188081,0,0.744281895337007,0.936113019343682,0.505157755894224,0.538192240565737,0.482443521363367,2.58654466233247,0,0.325929952884052,0.169745085775188,0.469380496577004,0.167506257441816,0.714130922658041,0.390267295715598,0.945810864637146,0.44292937929755,0.478364305972461,2.45794972073607,0.863424909329478,1.3018415272336,3.01582567878545,9.24639662491806,0,1.37968373152366,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0.727067458955011,0,0.632073515871632,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0,0.704015124191131,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.164140899745061,1.45740418314925,0,4.27177201994632,0,1.29636169158798,1.88368457004691,3.41735569302563,1.83022538565218,1.69978429993855,3.21888340344413,3.04039942369732,0,0,0,0.324016022465404,0,0,0.269728692769641,0.330613822901344,0,0.518459893167171,3.72803587852155,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,4.4241556887945,0.202725215290164,0.308132871494482,0.389762468933385,0.358053391334963,0.993406773906324,1.68273629327956,1.62458479892035,1.61546319917036,1.143102099825,2.41982844328417,3.70339946811059,3.07877893249054,2.92192255453922,0.226730383615211,0,0,0,0,0.93841237725591,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.561849044819294,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.423073039458382,0.365855945745545,0,0,0,0.237270036248348,0.394017929502254,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0,0.382576664137687,0.661774257358546,0.927471342481686 | ||
|short_description=p6@Casp8 | |short_description=p6@Casp8 | ||
}} | }} |
Latest revision as of 06:22, 27 September 2015
Short description: | p6@Casp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Casp8_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 0bp_to_ENSMUST00000165549, NM_001080126, uc007bct.1_5end |
EntrezGene: | Casp8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.78e-18 | 32 |
hematopoietic oligopotent progenitor cell | 7.78e-18 | 32 |
hematopoietic stem cell | 7.78e-18 | 32 |
hematopoietic multipotent progenitor cell | 7.78e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 6.36e-13 | 25 |
lymphoid lineage restricted progenitor cell | 8.15e-13 | 12 |
connective tissue cell | 2.08e-12 | 46 |
mesenchymal cell | 2.08e-12 | 46 |
leukocyte | 1.32e-11 | 17 |
nongranular leukocyte | 1.32e-11 | 17 |
lymphocyte | 1.40e-11 | 13 |
common lymphoid progenitor | 1.40e-11 | 13 |
T cell | 1.45e-11 | 11 |
pro-T cell | 1.45e-11 | 11 |
mature alpha-beta T cell | 7.16e-10 | 9 |
alpha-beta T cell | 7.16e-10 | 9 |
immature T cell | 7.16e-10 | 9 |
mature T cell | 7.16e-10 | 9 |
immature alpha-beta T cell | 7.16e-10 | 9 |
motile cell | 1.81e-09 | 54 |
CD4-positive, alpha-beta T cell | 1.34e-08 | 8 |
common myeloid progenitor | 5.41e-08 | 19 |
brush border epithelial cell | 1.76e-07 | 6 |
gut absorptive cell | 1.76e-07 | 6 |
enterocyte | 1.76e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.20e-19 | 48 |
immune system | 7.20e-19 | 48 |
hematopoietic system | 1.09e-15 | 45 |
blood island | 1.09e-15 | 45 |
connective tissue | 2.08e-12 | 46 |
organ component layer | 1.77e-11 | 24 |
mucosa | 7.26e-11 | 15 |
hemopoietic organ | 5.46e-10 | 29 |
immune organ | 5.46e-10 | 29 |
intestinal mucosa | 1.15e-08 | 13 |
wall of intestine | 1.15e-08 | 13 |
gastrointestinal system mucosa | 1.15e-08 | 13 |
mixed endoderm/mesoderm-derived structure | 1.38e-08 | 35 |
digestive system | 2.10e-08 | 116 |
digestive tract | 2.10e-08 | 116 |
primitive gut | 2.10e-08 | 116 |
endoderm-derived structure | 4.45e-08 | 118 |
endoderm | 4.45e-08 | 118 |
presumptive endoderm | 4.45e-08 | 118 |
gland of gut | 6.41e-08 | 24 |
intestine | 9.97e-08 | 31 |
subdivision of digestive tract | 2.80e-07 | 114 |
thymus | 3.69e-07 | 23 |
neck | 3.69e-07 | 23 |
respiratory system epithelium | 3.69e-07 | 23 |
hemolymphoid system gland | 3.69e-07 | 23 |
pharyngeal epithelium | 3.69e-07 | 23 |
thymic region | 3.69e-07 | 23 |
pharyngeal gland | 3.69e-07 | 23 |
entire pharyngeal arch endoderm | 3.69e-07 | 23 |
thymus primordium | 3.69e-07 | 23 |
early pharyngeal endoderm | 3.69e-07 | 23 |
gastrointestinal system | 5.03e-07 | 47 |