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FFCP PHASE1:Mm9::chr9:66197873..66197892,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:66197873..66197892,+
|DHSsupport=NA
|short_description=p5@Herc1
|DPIdataset=NA
|description=CAGE_peak_5_at_Herc1_5end
|association_with_transcript=-364bp_to_ENSMUST00000144280,NM_145617,uc009qeo.1,uc009qev.2_5end
|EntrezGene=235439
|EntrezGene=235439
|HGNC=
|HGNC=
|MCL_coexpression_id=15
|TSSclassifier=NA
|UniProt=E9PZP8,Q99KS8
|UniProt=E9PZP8,Q99KS8
|association_with_transcript=-364bp_to_ENSMUST00000144280,NM_145617,uc009qeo.1,uc009qev.2_5end
|cluster_id=chr9:66197873..66197892,+
|description=CAGE_peak_5_at_Herc1_5end
|id=chr9:66197873..66197892,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002027,1.33e-11,3;CL:0002006,1.33e-11,3;CL:0002024,1.33e-11,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002106!1.03e-07!6;UBERON:0004457!1.03e-07!6;UBERON:0000042!1.03e-07!6;UBERON:0004854!1.03e-07!6;UBERON:0009034!1.03e-07!6;UBERON:0002095!1.03e-07!6;UBERON:0004782!1.03e-07!6;UBERON:0003281!1.03e-07!6;UBERON:0009664!1.03e-07!6;UBERON:0002296!1.03e-07!6;UBERON:0005602!1.03e-07!6;UBERON:0001179!1.03e-07!6;UBERON:0006293!1.03e-07!6
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.08e-16,49;UBERON:0005173,5.08e-16,49;UBERON:0002417,5.08e-16,49;UBERON:0000916,5.08e-16,49;UBERON:0002106,6.82e-16,6;UBERON:0004457,6.82e-16,6;UBERON:0000042,6.82e-16,6;UBERON:0004854,6.82e-16,6;UBERON:0009034,6.82e-16,6;UBERON:0002095,6.82e-16,6;UBERON:0004782,6.82e-16,6;UBERON:0003281,6.82e-16,6;UBERON:0009664,6.82e-16,6;UBERON:0002296,6.82e-16,6;UBERON:0005602,6.82e-16,6;UBERON:0001179,6.82e-16,6;UBERON:0006293,6.82e-16,6;UBERON:0000981,7.84e-15,4;UBERON:0003608,7.84e-15,4;UBERON:0003826,7.84e-15,4;UBERON:0008202,7.84e-15,4;UBERON:0004381,7.84e-15,4;UBERON:0007273,7.84e-15,4;UBERON:0010912,7.84e-15,4;UBERON:0002513,7.84e-15,4;UBERON:0004375,7.84e-15,4;UBERON:0010740,7.84e-15,4;UBERON:0010363,7.84e-15,4;UBERON:0003860,7.84e-15,4;UBERON:0002428,7.84e-15,4;UBERON:0010742,7.84e-15,4;UBERON:0002495,7.84e-15,4;UBERON:0003464,7.84e-15,4;UBERON:0003606,7.84e-15,4;UBERON:0005893,7.84e-15,4;UBERON:0009749,7.84e-15,4;UBERON:0010712,7.84e-15,4;UBERON:0010886,7.84e-15,4;UBERON:0005254,7.84e-15,4;UBERON:0010885,7.84e-15,4;UBERON:0010881,7.84e-15,4;UBERON:0010882,7.84e-15,4;UBERON:0007844,7.84e-15,4;UBERON:0001441,7.84e-15,4;UBERON:0011249,7.84e-15,4;UBERON:0002091,7.84e-15,4;UBERON:0003285,7.84e-15,4;UBERON:0004288,7.84e-15,4;UBERON:0010129,7.84e-15,4;UBERON:0006234,7.84e-15,4;UBERON:0002107,1.21e-14,22;UBERON:0007499,1.21e-14,22;UBERON:0006925,1.21e-14,22;UBERON:0009497,1.21e-14,22;UBERON:0000015,1.21e-14,22;UBERON:0002423,1.21e-14,22;UBERON:0006235,1.21e-14,22;UBERON:0008835,1.21e-14,22;UBERON:0003894,1.21e-14,22;UBERON:0004161,1.21e-14,22;UBERON:0008836,1.21e-14,22;UBERON:0009854,6.20e-14,23;UBERON:0009856,6.20e-14,23;UBERON:0003887,5.57e-13,10;UBERON:0002365,1.10e-12,25;UBERON:0002330,1.10e-12,25;UBERON:0005418,6.80e-12,5;UBERON:0002472,6.80e-12,5;UBERON:0008784,6.80e-12,5;UBERON:0006058,6.80e-12,5;UBERON:0004709,6.80e-12,5;UBERON:0002529,6.80e-12,5;UBERON:0010538,6.80e-12,5;UBERON:0005420,6.80e-12,5;UBERON:0010758,6.80e-12,5;UBERON:0000978,6.80e-12,5;UBERON:0002103,6.80e-12,5;UBERON:0000376,6.80e-12,5;UBERON:0000154,6.80e-12,5;UBERON:0010709,6.80e-12,5;UBERON:0005730,6.80e-12,5;UBERON:0009569,4.19e-11,66;UBERON:0003104,2.24e-10,61;UBERON:0009142,2.24e-10,61;UBERON:0000075,6.26e-10,6;UBERON:0005856,6.26e-10,6;UBERON:0005866,6.26e-10,6;UBERON:0005863,6.26e-10,6;UBERON:0005177,9.01e-09,79;UBERON:0005256,1.22e-07,45;UBERON:0001041,1.80e-07,80;UBERON:0002100,2.52e-07,90;UBERON:0001474,2.59e-07,22;UBERON:0004765,2.59e-07,22;UBERON:0001434,2.59e-07,22;UBERON:0003914,3.10e-07,47;UBERON:0001048,3.26e-07,134
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66420737997229,9.11138703254217,3.49780939064073,0,0,0.84877930359606,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.587943535678524,0,0,0,9.73071607144862,1.45590164952668,2.87093973998512,7.75800405016355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33797274861845,5.11053387294328,6.97072548393047,6.49152388443209,7.23531479257251,5.60176873919124,5.4662266115654,1.78348749452539,2.74561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.492422699235184,0,0,8.37267315909478,0.206386867963223,2.03713980106683,10.7370020492674,9.02181902958766,13.4979122191848,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.853668028770671,2.18796045361465,0.209613162627982,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.832326981263301,0.459483751644906,0.476293691283074,0.463537303779422,0.578727661391115,1.23625770240992,0.147198920134397,0.685738504770831,0,0.476872379894642,0.581385666529314,0.282328141245992,0.169229215783353,0.365855945745545,0.789209134313529,0.407412341537585,0,0.355905054372522,0.492522411877817,0.818462086339379,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0.441182838239031,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66420737997229,9.11138703254217,3.49780939064073,0,0,0.84877930359606,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.587943535678524,0,0,0,9.73071607144862,1.45590164952668,2.87093973998512,7.75800405016355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33797274861845,5.11053387294328,6.97072548393047,6.49152388443209,7.23531479257251,5.60176873919124,5.4662266115654,1.78348749452539,2.74561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0.492422699235184,0,0,8.37267315909478,0.206386867963223,2.03713980106683,10.7370020492674,9.02181902958766,13.4979122191848,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.853668028770671,2.18796045361465,0.209613162627982,0.367687016900028,0.666740183404846,0.824140228955577,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.832326981263301,0.459483751644906,0.476293691283074,0.463537303779422,0.578727661391115,1.23625770240992,0.147198920134397,0.685738504770831,0,0.476872379894642,0.581385666529314,0.282328141245992,0.169229215783353,0.365855945745545,0.789209134313529,0.407412341537585,0,0.355905054372522,0.492522411877817,0.818462086339379,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0.441182838239031,0.463735671240843
|short_description=p5@Herc1
}}
}}

Latest revision as of 00:47, 27 September 2015

Short description:p5@Herc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Herc1_5end
Coexpression cluster:MCL_coexpression_mm9:15
Association with transcript: -364bp_to_ENSMUST00000144280, NM_145617, uc009qeo.1, uc009qev.2_5end
EntrezGene:Herc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Herc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E16.97
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G28.37
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D110.74
spleen, neonate N20.CNhs11112.824-19H19.02
spleen, neonate N25.CNhs11099.1354-25G313.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
abdomen element5.08e-1649
abdominal segment element5.08e-1649
abdominal segment of trunk5.08e-1649
abdomen5.08e-1649
spleen6.82e-166
cavity lining6.82e-166
serous membrane6.82e-166
gastrointestinal system mesentery6.82e-166
stomach region6.82e-166
mesentery6.82e-166
gastrointestinal system serosa6.82e-166
mesentery of stomach6.82e-166
gut mesentery6.82e-166
dorsal mesentery6.82e-166
dorsal mesogastrium6.82e-166
peritoneal cavity6.82e-166
spleen primordium6.82e-166
femur7.84e-154
hindlimb long bone7.84e-154
upper leg bone7.84e-154
bone of hip region7.84e-154
skeleton of limb7.84e-154
pelvic appendage skeleton7.84e-154
subdivision of skeleton7.84e-154
endochondral bone7.84e-154
bone of free limb or fin7.84e-154
bone of appendage girdle complex7.84e-154
endochondral element7.84e-154
hindlimb mesenchyme7.84e-154
limb bone7.84e-154
bone of pelvic complex7.84e-154
long bone7.84e-154
hindlimb bone7.84e-154
limb long bone7.84e-154
leg bone7.84e-154
limb mesenchyme7.84e-154
limb skeleton subdivision7.84e-154
hindlimb bone pre-cartilage condensation7.84e-154
upper leg mesenchyme7.84e-154
hindlimb cartilage element7.84e-154
limb cartilage element7.84e-154
limb bone pre-cartilage condensation7.84e-154
cartilage element7.84e-154
hindlimb skeleton7.84e-154
appendicular skeletal system7.84e-154
appendicular skeleton7.84e-154
limb of embryo7.84e-154
skeleton7.84e-154
femur cartilage element7.84e-154
femur pre-cartilage condensation7.84e-154
liver1.21e-1422
epithelial sac1.21e-1422
digestive gland1.21e-1422
epithelium of foregut-midgut junction1.21e-1422
anatomical boundary1.21e-1422
hepatobiliary system1.21e-1422
foregut-midgut junction1.21e-1422
hepatic diverticulum1.21e-1422
liver primordium1.21e-1422
septum transversum1.21e-1422
liver bud1.21e-1422
digestive tract diverticulum6.20e-1423
sac6.20e-1423
intraembryonic coelom5.57e-1310
exocrine gland1.10e-1225
exocrine system1.10e-1225
hindlimb bud6.80e-125
stylopod6.80e-125
lower limb segment6.80e-125
multi-limb segment region6.80e-125
pelvic appendage6.80e-125
limb segment6.80e-125
paired limb/fin segment6.80e-125
pelvic appendage bud6.80e-125
subdivision of organism along appendicular axis6.80e-125
leg6.80e-125
hindlimb6.80e-125
hindlimb stylopod6.80e-125
posterior region of body6.80e-125
pelvic complex6.80e-125
hindlimb/pelvic fin field6.80e-125
subdivision of trunk4.19e-1166
mesenchyme2.24e-1061
entire embryonic mesenchyme2.24e-1061
subdivision of skeletal system6.26e-106
developing mesenchymal condensation6.26e-106
pre-cartilage condensation6.26e-106
cartilaginous condensation6.26e-106
trunk region element9.01e-0979
trunk mesenchyme1.22e-0745
foregut1.80e-0780
trunk2.52e-0790
bone element2.59e-0722
skeletal element2.59e-0722
skeletal system2.59e-0722
epithelial tube3.10e-0747
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