Personal tools

UBERON:0010882

From FANTOM5_SSTAR

Jump to: navigation, search

Name:limb bone pre-cartilage condensation
Namespace:FANTOM

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005866(pre-cartilage condensation),UBERON:0009749(limb mesenchyme),UBERON:0015061(limb endochondral element)
part_of:UBERON:0002091(appendicular skeleton)



Children

is a:UBERON:0006234 (femur pre-cartilage condensation)
develops from:UBERON:0010881 (limb cartilage element)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010882 (limb bone pre-cartilage condensation), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.4e-49FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_5e5dd5d9d639af073e075fee955a7ac9p26@Myo18a
3.4e-49FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_5e5dd5d9d639af073e075fee955a7ac9p26@Myo18a
4.96e-49FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_6fb6fd6b9456ad637be3257a6dd344d7p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_6fb6fd6b9456ad637be3257a6dd344d7p@chr9:21934585..21934591, -
4.96e-49FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_6fb6fd6b9456ad637be3257a6dd344d7p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_6fb6fd6b9456ad637be3257a6dd344d7p@chr9:21934585..21934591, -
4.96e-49FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_6fb6fd6b9456ad637be3257a6dd344d7p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_6fb6fd6b9456ad637be3257a6dd344d7p@chr2:32482372..32482381, +
3.15e-44FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_87a4ba7e0ba5e467de26fc6b8ba3123bp@chr6:51525810..51525817, +
3.15e-44FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_87a4ba7e0ba5e467de26fc6b8ba3123bp@chr6:51525810..51525817, +
9.78e-40FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_428f4f81a9d02910fecf232f8e8601f3p@chr19:4876870..4876880, -
9.78e-40FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_428f4f81a9d02910fecf232f8e8601f3p@chr19:4876870..4876880, -
1.15e-39FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_27f33de8458e49152cfb5bfe0166fef5p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_27f33de8458e49152cfb5bfe0166fef5p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_27f33de8458e49152cfb5bfe0166fef5p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_27f33de8458e49152cfb5bfe0166fef5p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_27f33de8458e49152cfb5bfe0166fef5p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_27f33de8458e49152cfb5bfe0166fef5p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_27f33de8458e49152cfb5bfe0166fef5p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_27f33de8458e49152cfb5bfe0166fef5p@chr1:174140324..174140335, -
1.55e-39FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_7ec2b49cc849ae2ac396b6a42166e8a4p@chr1:174143249..174143260, -
1.55e-39FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_7ec2b49cc849ae2ac396b6a42166e8a4p@chr1:174143249..174143260, -
3.03e-39FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_3a1d2ff5998ef59f423047e4870fe2d0p@chr6:51525869..51525891, +
3.03e-39FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_3a1d2ff5998ef59f423047e4870fe2d0p@chr6:51525869..51525891, +
9.31e-39FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_2d62dbdf8e4edac48d8805bf6c2b929ep3@Asb16
9.31e-39FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_2d62dbdf8e4edac48d8805bf6c2b929ep3@Asb16
2.41e-35FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_f03a8cb0b54813cdcb17068870d80f37p@chr7:133604286..133604297, -
2.41e-35FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_f03a8cb0b54813cdcb17068870d80f37p@chr7:133604286..133604297, -
2.95e-35FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_b8611acf6417fe55a992b78512bcaf80p5@Pla2g5
2.95e-35FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_b8611acf6417fe55a992b78512bcaf80p5@Pla2g5
9.53e-34FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_262d85871c2edb3632e09e88728091e4p2@uc009mdq.1
9.53e-34FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_262d85871c2edb3632e09e88728091e4p2@uc009mdq.1
1.23e-33FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_d01f31a39414e30b0e03f7fc1dfa4c44p3@Mmp9
1.23e-33FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_d01f31a39414e30b0e03f7fc1dfa4c44p3@Mmp9
1.58e-33FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_4a6e5e4ab94e32e80fd523440e1c7467p2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_4a6e5e4ab94e32e80fd523440e1c7467p2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_4a6e5e4ab94e32e80fd523440e1c7467p@chr1:166815111..166815121, -
1.58e-33FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_4a6e5e4ab94e32e80fd523440e1c7467p@chr1:166815111..166815121, -
2.04e-33FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_0e76cdd5f34188c0416eef99daab5b25p@chr11:75409652..75409664, +
2.04e-33FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_0e76cdd5f34188c0416eef99daab5b25p4@Lipc
2.04e-33FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_0e76cdd5f34188c0416eef99daab5b25p4@Lipc
2.04e-33FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_0e76cdd5f34188c0416eef99daab5b25p@chr11:75409652..75409664, +
3.38e-33FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_151987fa50143b52fa01e25611a778b8p6@Sp7
3.38e-33FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_151987fa50143b52fa01e25611a778b8p6@Sp7
7.17e-33FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_4e391cfb655f95ef4edf323482d99b4dp@chr18:76271498..76271508, +
7.17e-33FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_4e391cfb655f95ef4edf323482d99b4dp@chr18:76271498..76271508, +
7.17e-33FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_4e391cfb655f95ef4edf323482d99b4dp@chr8:126415826..126415839, +
7.17e-33FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_4e391cfb655f95ef4edf323482d99b4dp@chr8:126415826..126415839, +
2.67e-30FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_13257518d96d4333b0f78b17e459b0b3p@chr2:32482387..32482399, +
2.67e-30FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_13257518d96d4333b0f78b17e459b0b3p@chr2:32482387..32482399, +
1.1e-29FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_129daf64d73e44e0bcab729a4dc94a71p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_129daf64d73e44e0bcab729a4dc94a71p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_129daf64d73e44e0bcab729a4dc94a71p@chr15:58649683..58649688, -
1.1e-29FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_129daf64d73e44e0bcab729a4dc94a71p@chr15:58649683..58649688, -
1.46e-29FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_01f8dab4f1bf988093013c3f4ec2d07ap@chr7:133590998..133591009, -
1.46e-29FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_01f8dab4f1bf988093013c3f4ec2d07ap@chr7:133590998..133591009, -
1.73e-29FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_f361387f3e601771c105f622b9278c96p2@Myoz3
1.73e-29FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_f361387f3e601771c105f622b9278c96p2@Myoz3
2.42e-29FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_b4f157e252350753bbb5cf797d77ddfap2@Myh4
2.42e-29FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_b4f157e252350753bbb5cf797d77ddfap2@Myh4
7.46e-29FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_041affc6dd259362ac15d5cb19f13a62p@chr1:57155729..57155740, -
7.46e-29FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_041affc6dd259362ac15d5cb19f13a62p@chr1:57155729..57155740, -
9.26e-29FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6p@chr11:67056544..67056589, -
9.26e-29FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6p@chr11:67056544..67056589, -
9.26e-29FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6p1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_8e6fe809f9b1a50b24cf3e0a55e0ddf6p1@Msmp
1.15e-28FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_2afaa365063203df912429eec37d2c59p@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_2afaa365063203df912429eec37d2c59p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_2afaa365063203df912429eec37d2c59p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_2afaa365063203df912429eec37d2c59p@chrY:2858251..2858257, +
1.43e-28FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_4fc33ffc83f996b9b994f0bb9453660ep@chr6:34436258..34436292, +
1.43e-28FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_4fc33ffc83f996b9b994f0bb9453660ep@chr6:34436258..34436292, +
2.2e-28FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_0096793aba0b7c4afa5f74f633bb34afp@chr11:67069796..67069817, -
2.2e-28FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_0096793aba0b7c4afa5f74f633bb34afp@chr11:67069796..67069817, -
2.72e-28FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_9d500260e4d46d0ff988238bf372394fp@chr8:107702369..107702386, +
2.72e-28FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_9d500260e4d46d0ff988238bf372394fp@chr8:107702369..107702386, +
3.45e-28FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_5127e8aedc60de2dda7e1f633feef80bp1@Siglec15
3.45e-28FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_5127e8aedc60de2dda7e1f633feef80bp1@Siglec15
6.5e-28FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_ea5508a71c21a06855b4e64ffafe07f9p6@Atp2a1
6.5e-28FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_ea5508a71c21a06855b4e64ffafe07f9p6@Atp2a1
8.9e-28FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_9f520fe98ff08a0fd0cc17b5a285e2d1p7@Atp2a1
8.9e-28FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_9f520fe98ff08a0fd0cc17b5a285e2d1p7@Atp2a1
1.42e-27FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_8c9913b202b82515f204a672d0135de7p@chr7:133600635..133600663, +
1.42e-27FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_8c9913b202b82515f204a672d0135de7p@chr7:133600635..133600663, +
1.42e-27FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_8c9913b202b82515f204a672d0135de7p@chr7:133592162..133592188, -
1.42e-27FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_8c9913b202b82515f204a672d0135de7p@chr7:133592162..133592188, -
6.75e-27FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_18421c914d6383db779c738486bb679cp4@Sgca
6.75e-27FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_18421c914d6383db779c738486bb679cp4@Sgca
1.66e-26FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_e99c82ebf1993f958eae99afef07cc50p1@Mepe
1.66e-26FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_e99c82ebf1993f958eae99afef07cc50p1@Mepe
3.47e-26FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_1ca02ff8a26215af5e01b5c4a2ee7b65p2@Tm4sf19
3.47e-26FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_1ca02ff8a26215af5e01b5c4a2ee7b65p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_1ca02ff8a26215af5e01b5c4a2ee7b65p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_1ca02ff8a26215af5e01b5c4a2ee7b65p2@Tm4sf19
1.12e-25FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_2cfd1adc071ba7b8ffc7190e18785753p5@Col11a2
1.12e-25FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_2cfd1adc071ba7b8ffc7190e18785753p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_2cfd1adc071ba7b8ffc7190e18785753p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_2cfd1adc071ba7b8ffc7190e18785753p5@Col11a2
1.36e-25FFCP PHASE2:Mm9::chr2:180890942..180890956,-#_3b563e2adb0185d180e7024ddb49a0c4p@chr2:180890942..180890956, -
1.36e-25FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_3b563e2adb0185d180e7024ddb49a0c4p@chr2:180890942..180890956, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010882&oldid=3278042"