FFCP PHASE1:Mm9::chr1:195027588..195027611,-: Difference between revisions
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{{FFCP|EntrezGene=215243|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=37bp_to_ENSMUST00000161403_5end|description=CAGE_peak_3_at_Traf3ip3_5end|id=chr1:195027588..195027611,-|ontology_enrichment_celltype=CL:0000988!8.61e-13!32;CL:0002032!8.61e-13!32;CL:0000037!8.61e-13!32;CL:0000566!8.61e-13!32;CL:0000837!8.61e-13!32;CL:0000838!8.25e-10!12;CL:0000542!9.67e-10!13;CL:0000051!9.67e-10!13;CL:0002031!1.48e-09!25;CL:0000084!5.64e-09!11;CL:0000827!5.64e-09!11;CL:0000738!2.95e-08!17;CL:0002087!2.95e-08!17;CL:0000791!1.31e-07!9;CL:0000789!1.31e-07!9;CL:0002420!1.31e-07!9;CL:0002419!1.31e-07!9;CL:0000790!1.31e-07!9;CL:0000624!7.63e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,1.63e-18,32;CL:0002032,1.63e-18,32;CL:0000037,1.63e-18,32;CL:0000837,1.63e-18,32;CL:0000838,2.00e-17,12;CL:0000542,7.82e-16,13;CL:0000051,7.82e-16,13;CL:0000084,8.02e-16,11;CL:0000827,8.02e-16,11;CL:0002031,5.14e-15,25;CL:0000791,3.34e-13,9;CL:0000789,3.34e-13,9;CL:0002420,3.34e-13,9;CL:0002419,3.34e-13,9;CL:0000790,3.34e-13,9;CL:0000624,9.78e-12,8;CL:0000738,2.37e-11,17;CL:0002087,2.37e-11,17;CL:0002320,5.47e-11,46;CL:0000134,5.47e-11,46;CL:0000893,8.39e-09,6;CL:0002489,8.39e-09,6;CL:0000898,8.39e-09,6;CL:0000809,8.39e-09,6;CL:0000810,8.39e-09,6;CL:0000895,8.39e-09,6;CL:0000808,8.39e-09,6;CL:0000894,8.39e-09,6;CL:0000806,8.39e-09,6;CL:0000807,8.39e-09,6;CL:0000805,8.39e-09,6;CL:0002425,8.39e-09,6;CL:0002436,8.39e-09,6;CL:0002427,8.39e-09,6;CL:0002428,8.39e-09,6;CL:0002429,8.39e-09,6;CL:0002433,8.39e-09,6;CL:0002431,8.39e-09,6;CL:0002432,8.39e-09,6;CL:0000219,1.70e-08,54;CL:0000553,6.74e-07,6;CL:0000556,6.74e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.52e-18!48;UBERON:0002405!1.43e-16!70;UBERON:0002390!1.09e-15!45;UBERON:0003061!1.09e-15!45;UBERON:0004177!1.95e-13!29;UBERON:0005057!1.64e-11!51;UBERON:0003408!1.62e-10!24;UBERON:0002370!4.79e-10!23;UBERON:0000974!4.79e-10!23;UBERON:0004807!4.79e-10!23;UBERON:0005058!4.79e-10!23;UBERON:0003351!4.79e-10!23;UBERON:0009113!4.79e-10!23;UBERON:0003295!4.79e-10!23;UBERON:0009722!4.79e-10!23;UBERON:0005562!4.79e-10!23;UBERON:0007690!4.79e-10!23;UBERON:0006562!2.79e-09!24;UBERON:0001557!2.79e-09!24;UBERON:0001042!2.79e-09!24;UBERON:0008814!2.79e-09!24;UBERON:0009145!2.79e-09!24;UBERON:0001004!1.09e-08!42;UBERON:0000065!2.82e-08!41;UBERON:0000072!2.26e-07!27;UBERON:0003081!4.53e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.53e-25,48;UBERON:0002405,5.53e-25,48;UBERON:0002390,4.22e-21,45;UBERON:0003061,4.22e-21,45;UBERON:0004177,1.58e-19,29;UBERON:0005057,1.58e-19,29;UBERON:0003408,1.44e-15,24;UBERON:0000077,4.01e-15,35;UBERON:0002370,1.08e-14,23;UBERON:0000974,1.08e-14,23;UBERON:0004807,1.08e-14,23;UBERON:0005058,1.08e-14,23;UBERON:0003351,1.08e-14,23;UBERON:0009113,1.08e-14,23;UBERON:0003295,1.08e-14,23;UBERON:0009722,1.08e-14,23;UBERON:0005562,1.08e-14,23;UBERON:0007690,1.08e-14,23;UBERON:0006562,6.86e-14,24;UBERON:0001557,6.86e-14,24;UBERON:0001042,6.86e-14,24;UBERON:0008814,6.86e-14,24;UBERON:0009145,6.86e-14,24;UBERON:0000072,7.61e-12,27;UBERON:0002384,5.47e-11,46;UBERON:0001004,7.66e-11,42;UBERON:0000065,3.81e-10,41;UBERON:0001041,5.09e-10,80;UBERON:0007811,8.15e-09,36;UBERON:0003081,1.03e-08,87;UBERON:0000490,8.85e-08,66;UBERON:0005911,3.02e-07,69;UBERON:0003929,3.36e-07,55|phase1_expression=0,0,0,0,0,0,0,12.2667157269497,4.36445038670167,9.12851652655775,1.19852577757853,1.43589886191606,3.93761678841773,5.76974655965383,1.33243904726265,4.25198061518635,0.699561878128147,16.7194947639866,18.373334103169,17.8243653755173,0.340173160604279,5.06383851124515,2.87319768052829,6.07971206614945,4.5881856213434,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,43.1087579659015,29.6907430919044,35.0760908462445,54.1172968988533,54.6436387966757,34.9567454182431,0,0,0,0,0,0,0,0,0,31.8786951509699,7.25362142011344,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,15.5362730188303,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,2.42925670306433,1.93950101254089,0,0,0,0.766371165625774,1.91704199209472,1.19980546198682,2.92261522268049,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0.702213187313235,1.02939162845886,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0,0,0,0.660837565967596,0.793351699990633,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0.964708639009667,1.78238096246994,1.43848068725405,1.78348749452539,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0.482443521363367,1.29327233116623,0,0,0.169745085775188,0,0.502518772325447,0,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,1.14704320301017,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.874442509889552,0.18542530201051,3.58828849675491,0.412773735926445,1.29636169158798,2.82552685507037,3.8274383761887,4.11800711771741,1.69978429993855,2.09927178485487,1.52019971184866,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0,0,0,0,1.26404448251271,0.405450430580328,0.718976700153791,0.77952493786677,1.9692936523423,2.58285761215644,2.28371354087941,3.10148007066612,1.9183625490148,1.905170166375,2.72230699869469,3.02119430293232,4.13710919053417,3.50630706544707,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.927471342481686|short_description=p3@Traf3ip3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215243 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENSMUST00000161403_5end | |||
|cluster_id=chr1:195027588..195027611,- | |||
|description=CAGE_peak_3_at_Traf3ip3_5end | |||
|id=chr1:195027588..195027611,- | |||
|ontology_enrichment_celltype=CL:0000988!8.61e-13!32;CL:0002032!8.61e-13!32;CL:0000037!8.61e-13!32;CL:0000566!8.61e-13!32;CL:0000837!8.61e-13!32;CL:0000838!8.25e-10!12;CL:0000542!9.67e-10!13;CL:0000051!9.67e-10!13;CL:0002031!1.48e-09!25;CL:0000084!5.64e-09!11;CL:0000827!5.64e-09!11;CL:0000738!2.95e-08!17;CL:0002087!2.95e-08!17;CL:0000791!1.31e-07!9;CL:0000789!1.31e-07!9;CL:0002420!1.31e-07!9;CL:0002419!1.31e-07!9;CL:0000790!1.31e-07!9;CL:0000624!7.63e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.63e-18,32;CL:0002032,1.63e-18,32;CL:0000037,1.63e-18,32;CL:0000837,1.63e-18,32;CL:0000838,2.00e-17,12;CL:0000542,7.82e-16,13;CL:0000051,7.82e-16,13;CL:0000084,8.02e-16,11;CL:0000827,8.02e-16,11;CL:0002031,5.14e-15,25;CL:0000791,3.34e-13,9;CL:0000789,3.34e-13,9;CL:0002420,3.34e-13,9;CL:0002419,3.34e-13,9;CL:0000790,3.34e-13,9;CL:0000624,9.78e-12,8;CL:0000738,2.37e-11,17;CL:0002087,2.37e-11,17;CL:0002320,5.47e-11,46;CL:0000134,5.47e-11,46;CL:0000893,8.39e-09,6;CL:0002489,8.39e-09,6;CL:0000898,8.39e-09,6;CL:0000809,8.39e-09,6;CL:0000810,8.39e-09,6;CL:0000895,8.39e-09,6;CL:0000808,8.39e-09,6;CL:0000894,8.39e-09,6;CL:0000806,8.39e-09,6;CL:0000807,8.39e-09,6;CL:0000805,8.39e-09,6;CL:0002425,8.39e-09,6;CL:0002436,8.39e-09,6;CL:0002427,8.39e-09,6;CL:0002428,8.39e-09,6;CL:0002429,8.39e-09,6;CL:0002433,8.39e-09,6;CL:0002431,8.39e-09,6;CL:0002432,8.39e-09,6;CL:0000219,1.70e-08,54;CL:0000553,6.74e-07,6;CL:0000556,6.74e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.52e-18!48;UBERON:0002405!1.43e-16!70;UBERON:0002390!1.09e-15!45;UBERON:0003061!1.09e-15!45;UBERON:0004177!1.95e-13!29;UBERON:0005057!1.64e-11!51;UBERON:0003408!1.62e-10!24;UBERON:0002370!4.79e-10!23;UBERON:0000974!4.79e-10!23;UBERON:0004807!4.79e-10!23;UBERON:0005058!4.79e-10!23;UBERON:0003351!4.79e-10!23;UBERON:0009113!4.79e-10!23;UBERON:0003295!4.79e-10!23;UBERON:0009722!4.79e-10!23;UBERON:0005562!4.79e-10!23;UBERON:0007690!4.79e-10!23;UBERON:0006562!2.79e-09!24;UBERON:0001557!2.79e-09!24;UBERON:0001042!2.79e-09!24;UBERON:0008814!2.79e-09!24;UBERON:0009145!2.79e-09!24;UBERON:0001004!1.09e-08!42;UBERON:0000065!2.82e-08!41;UBERON:0000072!2.26e-07!27;UBERON:0003081!4.53e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.53e-25,48;UBERON:0002405,5.53e-25,48;UBERON:0002390,4.22e-21,45;UBERON:0003061,4.22e-21,45;UBERON:0004177,1.58e-19,29;UBERON:0005057,1.58e-19,29;UBERON:0003408,1.44e-15,24;UBERON:0000077,4.01e-15,35;UBERON:0002370,1.08e-14,23;UBERON:0000974,1.08e-14,23;UBERON:0004807,1.08e-14,23;UBERON:0005058,1.08e-14,23;UBERON:0003351,1.08e-14,23;UBERON:0009113,1.08e-14,23;UBERON:0003295,1.08e-14,23;UBERON:0009722,1.08e-14,23;UBERON:0005562,1.08e-14,23;UBERON:0007690,1.08e-14,23;UBERON:0006562,6.86e-14,24;UBERON:0001557,6.86e-14,24;UBERON:0001042,6.86e-14,24;UBERON:0008814,6.86e-14,24;UBERON:0009145,6.86e-14,24;UBERON:0000072,7.61e-12,27;UBERON:0002384,5.47e-11,46;UBERON:0001004,7.66e-11,42;UBERON:0000065,3.81e-10,41;UBERON:0001041,5.09e-10,80;UBERON:0007811,8.15e-09,36;UBERON:0003081,1.03e-08,87;UBERON:0000490,8.85e-08,66;UBERON:0005911,3.02e-07,69;UBERON:0003929,3.36e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,12.2667157269497,4.36445038670167,9.12851652655775,1.19852577757853,1.43589886191606,3.93761678841773,5.76974655965383,1.33243904726265,4.25198061518635,0.699561878128147,16.7194947639866,18.373334103169,17.8243653755173,0.340173160604279,5.06383851124515,2.87319768052829,6.07971206614945,4.5881856213434,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,43.1087579659015,29.6907430919044,35.0760908462445,54.1172968988533,54.6436387966757,34.9567454182431,0,0,0,0,0,0,0,0,0,31.8786951509699,7.25362142011344,8.73843877770406,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,15.5362730188303,0.148442139064825,0,0,0.230615497256059,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,2.42925670306433,1.93950101254089,0,0,0,0.766371165625774,1.91704199209472,1.19980546198682,2.92261522268049,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.870848794270651,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0.702213187313235,1.02939162845886,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0.658650345873152,0,0,0,0.660837565967596,0.793351699990633,0.213288250535234,0,0.644337306610467,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0.964708639009667,1.78238096246994,1.43848068725405,1.78348749452539,0.549122826376163,1.43768206527355,1.48856379067401,0.312037673114561,0,0,0.482443521363367,1.29327233116623,0,0,0.169745085775188,0,0.502518772325447,0,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,1.14704320301017,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0.874442509889552,0.18542530201051,3.58828849675491,0.412773735926445,1.29636169158798,2.82552685507037,3.8274383761887,4.11800711771741,1.69978429993855,2.09927178485487,1.52019971184866,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0,0.234714477291508,0,0,0,0,1.26404448251271,0.405450430580328,0.718976700153791,0.77952493786677,1.9692936523423,2.58285761215644,2.28371354087941,3.10148007066612,1.9183625490148,1.905170166375,2.72230699869469,3.02119430293232,4.13710919053417,3.50630706544707,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.927471342481686 | |||
|short_description=p3@Traf3ip3 | |||
}} |
Latest revision as of 00:38, 27 September 2015
Short description: | p3@Traf3ip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Traf3ip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 37bp_to_ENSMUST00000161403_5end |
EntrezGene: | Traf3ip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.53e-25 | 48 |
immune system | 5.53e-25 | 48 |
hematopoietic system | 4.22e-21 | 45 |
blood island | 4.22e-21 | 45 |
hemopoietic organ | 1.58e-19 | 29 |
immune organ | 1.58e-19 | 29 |
gland of gut | 1.44e-15 | 24 |
mixed endoderm/mesoderm-derived structure | 4.01e-15 | 35 |
thymus | 1.08e-14 | 23 |
neck | 1.08e-14 | 23 |
respiratory system epithelium | 1.08e-14 | 23 |
hemolymphoid system gland | 1.08e-14 | 23 |
pharyngeal epithelium | 1.08e-14 | 23 |
thymic region | 1.08e-14 | 23 |
pharyngeal gland | 1.08e-14 | 23 |
entire pharyngeal arch endoderm | 1.08e-14 | 23 |
thymus primordium | 1.08e-14 | 23 |
early pharyngeal endoderm | 1.08e-14 | 23 |
pharynx | 6.86e-14 | 24 |
upper respiratory tract | 6.86e-14 | 24 |
chordate pharynx | 6.86e-14 | 24 |
pharyngeal arch system | 6.86e-14 | 24 |
pharyngeal region of foregut | 6.86e-14 | 24 |
segment of respiratory tract | 7.61e-12 | 27 |
connective tissue | 5.47e-11 | 46 |
respiratory system | 7.66e-11 | 42 |
respiratory tract | 3.81e-10 | 41 |
foregut | 5.09e-10 | 80 |
craniocervical region | 8.15e-09 | 36 |
lateral plate mesoderm | 1.03e-08 | 87 |
unilaminar epithelium | 8.85e-08 | 66 |
endo-epithelium | 3.02e-07 | 69 |
gut epithelium | 3.36e-07 | 55 |