FFCP PHASE1:Mm9::chr2:73324462..73324475,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:73324462..73324475,- to FFCP PHASE1:Mm9::chr2:73324462..73324475,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=215280 | |EntrezGene=215280 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=918 | |||
|TSSclassifier=NA | |||
|UniProt=F6QWW7 | |UniProt=F6QWW7 | ||
|association_with_transcript=50bp_to_ENSMUST00000141264_5end | |||
|cluster_id=chr2:73324462..73324475,- | |||
|description=CAGE_peak_2_at_Wipf1_5end | |||
|id=chr2:73324462..73324475,- | |||
|ontology_enrichment_celltype=CL:0000988!6.94e-11!32;CL:0002032!6.94e-11!32;CL:0000037!6.94e-11!32;CL:0000566!6.94e-11!32;CL:0000837!6.94e-11!32;CL:0000738!6.79e-10!17;CL:0002087!6.79e-10!17;CL:0002031!2.45e-09!25;CL:0000838!4.28e-08!12;CL:0000542!8.16e-08!13;CL:0000051!8.16e-08!13;CL:0000084!1.65e-07!11;CL:0000827!1.65e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.46e-12,32;CL:0002032,1.46e-12,32;CL:0000037,1.46e-12,32;CL:0000837,1.46e-12,32;CL:0002031,6.59e-11,25;CL:0000738,1.28e-10,17;CL:0002087,1.28e-10,17;CL:0000838,1.15e-08,12;CL:0002320,1.58e-08,46;CL:0000134,1.58e-08,46;CL:0000542,2.32e-08,13;CL:0000051,2.32e-08,13;CL:0000084,4.97e-08,11;CL:0000827,4.97e-08,11;CL:0000791,6.30e-07,9;CL:0000789,6.30e-07,9;CL:0002420,6.30e-07,9;CL:0002419,6.30e-07,9;CL:0000790,6.30e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.45e-21!70;UBERON:0002193!8.06e-20!48;UBERON:0002390!1.29e-18!45;UBERON:0003061!1.29e-18!45;UBERON:0003081!1.41e-12!88;UBERON:0005057!9.39e-12!51;UBERON:0004177!2.29e-10!29;UBERON:0002371!3.06e-09!16;UBERON:0001474!8.20e-09!22;UBERON:0004765!8.20e-09!22;UBERON:0001434!8.20e-09!22;UBERON:0002370!6.50e-08!23;UBERON:0000974!6.50e-08!23;UBERON:0004807!6.50e-08!23;UBERON:0005058!6.50e-08!23;UBERON:0003351!6.50e-08!23;UBERON:0009113!6.50e-08!23;UBERON:0003295!6.50e-08!23;UBERON:0009722!6.50e-08!23;UBERON:0005562!6.50e-08!23;UBERON:0007690!6.50e-08!23;UBERON:0000926!7.51e-08!193;UBERON:0004120!7.51e-08!193;UBERON:0006603!7.51e-08!193;UBERON:0003408!1.18e-07!24;UBERON:0002204!1.52e-07!32;UBERON:0006562!1.62e-07!24;UBERON:0001557!1.62e-07!24;UBERON:0001042!1.62e-07!24;UBERON:0008814!1.62e-07!24;UBERON:0009145!1.62e-07!24;UBERON:0000077!9.29e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.06e-22,48;UBERON:0002405,2.06e-22,48;UBERON:0002390,4.23e-21,45;UBERON:0003061,4.23e-21,45;UBERON:0003081,8.48e-13,87;UBERON:0000077,3.16e-12,35;UBERON:0004177,5.13e-12,29;UBERON:0005057,5.13e-12,29;UBERON:0002371,6.56e-10,16;UBERON:0001474,1.23e-09,22;UBERON:0004765,1.23e-09,22;UBERON:0001434,1.23e-09,22;UBERON:0002370,2.60e-09,23;UBERON:0000974,2.60e-09,23;UBERON:0004807,2.60e-09,23;UBERON:0005058,2.60e-09,23;UBERON:0003351,2.60e-09,23;UBERON:0009113,2.60e-09,23;UBERON:0003295,2.60e-09,23;UBERON:0009722,2.60e-09,23;UBERON:0005562,2.60e-09,23;UBERON:0007690,2.60e-09,23;UBERON:0003408,5.33e-09,24;UBERON:0002204,6.36e-09,32;UBERON:0002384,1.58e-08,46;UBERON:0006562,1.77e-08,24;UBERON:0001557,1.77e-08,24;UBERON:0001042,1.77e-08,24;UBERON:0008814,1.77e-08,24;UBERON:0009145,1.77e-08,24;UBERON:0000926,2.54e-08,120;UBERON:0004120,2.54e-08,120;UBERON:0006603,2.54e-08,120;UBERON:0001041,2.84e-08,80;UBERON:0002530,8.73e-07,65 | |||
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| ||
|short_description=p2@Wipf1 | |||
}} | }} |
Latest revision as of 23:07, 26 September 2015
Short description: | p2@Wipf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Wipf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:918 |
Association with transcript: | 50bp_to_ENSMUST00000141264_5end |
EntrezGene: | Wipf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.46e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.46e-12 | 32 |
hematopoietic stem cell | 1.46e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.46e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 6.59e-11 | 25 |
leukocyte | 1.28e-10 | 17 |
nongranular leukocyte | 1.28e-10 | 17 |
lymphoid lineage restricted progenitor cell | 1.15e-08 | 12 |
connective tissue cell | 1.58e-08 | 46 |
mesenchymal cell | 1.58e-08 | 46 |
lymphocyte | 2.32e-08 | 13 |
common lymphoid progenitor | 2.32e-08 | 13 |
T cell | 4.97e-08 | 11 |
pro-T cell | 4.97e-08 | 11 |
mature alpha-beta T cell | 6.30e-07 | 9 |
alpha-beta T cell | 6.30e-07 | 9 |
immature T cell | 6.30e-07 | 9 |
mature T cell | 6.30e-07 | 9 |
immature alpha-beta T cell | 6.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.06e-22 | 48 |
immune system | 2.06e-22 | 48 |
hematopoietic system | 4.23e-21 | 45 |
blood island | 4.23e-21 | 45 |
lateral plate mesoderm | 8.48e-13 | 87 |
mixed endoderm/mesoderm-derived structure | 3.16e-12 | 35 |
hemopoietic organ | 5.13e-12 | 29 |
immune organ | 5.13e-12 | 29 |
bone marrow | 6.56e-10 | 16 |
bone element | 1.23e-09 | 22 |
skeletal element | 1.23e-09 | 22 |
skeletal system | 1.23e-09 | 22 |
thymus | 2.60e-09 | 23 |
neck | 2.60e-09 | 23 |
respiratory system epithelium | 2.60e-09 | 23 |
hemolymphoid system gland | 2.60e-09 | 23 |
pharyngeal epithelium | 2.60e-09 | 23 |
thymic region | 2.60e-09 | 23 |
pharyngeal gland | 2.60e-09 | 23 |
entire pharyngeal arch endoderm | 2.60e-09 | 23 |
thymus primordium | 2.60e-09 | 23 |
early pharyngeal endoderm | 2.60e-09 | 23 |
gland of gut | 5.33e-09 | 24 |
musculoskeletal system | 6.36e-09 | 32 |
connective tissue | 1.58e-08 | 46 |
pharynx | 1.77e-08 | 24 |
upper respiratory tract | 1.77e-08 | 24 |
chordate pharynx | 1.77e-08 | 24 |
pharyngeal arch system | 1.77e-08 | 24 |
pharyngeal region of foregut | 1.77e-08 | 24 |
mesoderm | 2.54e-08 | 120 |
mesoderm-derived structure | 2.54e-08 | 120 |
presumptive mesoderm | 2.54e-08 | 120 |
foregut | 2.84e-08 | 80 |
gland | 8.73e-07 | 65 |