FFCP PHASE1:Mm9::chr2:22629802..22629818,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:22629802..22629818,+ to FFCP PHASE1:Mm9::chr2:22629802..22629818,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54519 | |EntrezGene=54519 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2618 | |||
|TSSclassifier=NA | |||
|UniProt=B1AYC9,Q8R5A3,Q3TS23 | |UniProt=B1AYC9,Q8R5A3,Q3TS23 | ||
|association_with_transcript=-28bp_to_NM_019456,uc008inl.2,uc008inm.2,uc008inn.2,uc008ino.2_5end | |||
|cluster_id=chr2:22629802..22629818,+ | |||
|description=CAGE_peak_5_at_Apbb1ip_5end | |||
|id=chr2:22629802..22629818,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.04e-11!32;CL:0002032!3.04e-11!32;CL:0000037!3.04e-11!32;CL:0000566!3.04e-11!32;CL:0000837!3.04e-11!32;CL:0002031!2.64e-10!25;CL:0000838!1.45e-08!12;CL:0000084!3.44e-08!11;CL:0000827!3.44e-08!11;CL:0002320!1.58e-07!46;CL:0000134!1.58e-07!46;CL:0000791!1.98e-07!9;CL:0000789!1.98e-07!9;CL:0002420!1.98e-07!9;CL:0002419!1.98e-07!9;CL:0000790!1.98e-07!9;CL:0000542!2.21e-07!13;CL:0000051!2.21e-07!13;CL:0000738!2.27e-07!17;CL:0002087!2.27e-07!17;CL:0000624!7.78e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.62e-16,32;CL:0002032,4.62e-16,32;CL:0000037,4.62e-16,32;CL:0000837,4.62e-16,32;CL:0002031,9.02e-16,25;CL:0000838,2.06e-14,12;CL:0000084,1.00e-13,11;CL:0000827,1.00e-13,11;CL:0000542,5.04e-13,13;CL:0000051,5.04e-13,13;CL:0000738,9.61e-13,17;CL:0002087,9.61e-13,17;CL:0000791,2.46e-12,9;CL:0000789,2.46e-12,9;CL:0002420,2.46e-12,9;CL:0002419,2.46e-12,9;CL:0000790,2.46e-12,9;CL:0000624,2.99e-11,8;CL:0002320,3.95e-11,46;CL:0000134,3.95e-11,46;CL:0000219,2.67e-09,54;CL:0000893,9.80e-09,6;CL:0002489,9.80e-09,6;CL:0000898,9.80e-09,6;CL:0000809,9.80e-09,6;CL:0000810,9.80e-09,6;CL:0000895,9.80e-09,6;CL:0000808,9.80e-09,6;CL:0000894,9.80e-09,6;CL:0000806,9.80e-09,6;CL:0000807,9.80e-09,6;CL:0000805,9.80e-09,6;CL:0002425,9.80e-09,6;CL:0002436,9.80e-09,6;CL:0002427,9.80e-09,6;CL:0002428,9.80e-09,6;CL:0002429,9.80e-09,6;CL:0002433,9.80e-09,6;CL:0002431,9.80e-09,6;CL:0002432,9.80e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-23!45;UBERON:0003061!1.20e-23!45;UBERON:0002193!4.78e-23!48;UBERON:0004177!2.21e-18!29;UBERON:0002405!8.08e-17!70;UBERON:0003408!8.69e-16!24;UBERON:0006562!1.25e-15!24;UBERON:0001557!1.25e-15!24;UBERON:0001042!1.25e-15!24;UBERON:0008814!1.25e-15!24;UBERON:0009145!1.25e-15!24;UBERON:0002370!1.93e-15!23;UBERON:0000974!1.93e-15!23;UBERON:0004807!1.93e-15!23;UBERON:0005058!1.93e-15!23;UBERON:0003351!1.93e-15!23;UBERON:0009113!1.93e-15!23;UBERON:0003295!1.93e-15!23;UBERON:0009722!1.93e-15!23;UBERON:0005562!1.93e-15!23;UBERON:0007690!1.93e-15!23;UBERON:0003081!1.30e-14!88;UBERON:0000072!2.93e-12!27;UBERON:0005057!2.57e-11!51;UBERON:0001004!3.90e-11!42;UBERON:0002204!8.03e-11!32;UBERON:0000065!9.20e-11!41;UBERON:0002368!1.69e-08!60;UBERON:0002530!4.13e-08!65;UBERON:0000063!7.11e-08!35;UBERON:0002384!1.58e-07!46;UBERON:0000490!4.81e-07!66;UBERON:0001474!8.91e-07!22;UBERON:0004765!8.91e-07!22;UBERON:0001434!8.91e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-35,45;UBERON:0003061,1.58e-35,45;UBERON:0002193,1.28e-34,48;UBERON:0002405,1.28e-34,48;UBERON:0004177,5.69e-29,29;UBERON:0005057,5.69e-29,29;UBERON:0003408,3.42e-24,24;UBERON:0002370,1.57e-23,23;UBERON:0000974,1.57e-23,23;UBERON:0004807,1.57e-23,23;UBERON:0005058,1.57e-23,23;UBERON:0003351,1.57e-23,23;UBERON:0009113,1.57e-23,23;UBERON:0003295,1.57e-23,23;UBERON:0009722,1.57e-23,23;UBERON:0005562,1.57e-23,23;UBERON:0007690,1.57e-23,23;UBERON:0000077,2.11e-22,35;UBERON:0006562,3.07e-22,24;UBERON:0001557,3.07e-22,24;UBERON:0001042,3.07e-22,24;UBERON:0008814,3.07e-22,24;UBERON:0009145,3.07e-22,24;UBERON:0003081,3.03e-19,87;UBERON:0000072,5.99e-19,27;UBERON:0000490,4.33e-15,66;UBERON:0000926,9.43e-14,120;UBERON:0004120,9.43e-14,120;UBERON:0006603,9.43e-14,120;UBERON:0007811,1.25e-13,36;UBERON:0001004,1.19e-12,42;UBERON:0000065,4.78e-12,41;UBERON:0002204,8.01e-12,32;UBERON:0001041,8.43e-12,80;UBERON:0003929,1.66e-11,55;UBERON:0002384,3.95e-11,46;UBERON:0000153,2.86e-10,43;UBERON:0002368,7.41e-10,60;UBERON:0002530,3.21e-09,65;UBERON:0005911,7.54e-09,69;UBERON:0002371,7.53e-08,16;UBERON:0001474,5.56e-07,22;UBERON:0004765,5.56e-07,22;UBERON:0001434,5.56e-07,22;UBERON:0000949,6.50e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,6.32704284863724,13.3749286044083,11.9372908424217,2.73948749160808,3.35043067780413,9.75844160607873,7.51815460803378,3.66420737997229,3.03712901084739,2.79824751251259,1.26184866143295,1.09691546884591,1.27316895539409,0.17008658030214,1.19149141441062,1.82839852397255,0.319984845586813,0,0,0,0,0.190023419456374,0,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0,0,7.11503772252743,2.3440060335714,7.32933241563318,7.64700934440319,8.87959130445979,7.76816564849846,2.26614272356039,2.53442328048786,1.46837401729345,1.56478268869608,0,0.219686182734472,0.388859798148567,0,0,1.34226084846189,13.7818806982155,5.37750078627942,1.02903774414379,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,0.988866362566974,3.5524005747305,3.29560121570245,0.384218305321555,0,0,0,0.856952953211411,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0.427115042397309,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0.340860645156116,0.519572009205738,0,0.281686839553361,3.84979432242953,7.64415719119937,7.11066703153331,0,0,0,0.79928715803342,3.6251303710604,0.445326417194474,0.346970653532272,0,0.461230994512117,0,0,0.376999773989026,0,0.722996784599558,1.76922110389975,0.808834249737046,1.32504911076236,0.969750506270444,0,0,0,0,1.07833612055328,0.599902730993408,1.01656181658452,0.299581278809645,0,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,0,0.420883711772948,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.42081749697796,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.492502392237286,0.243206428637567,0.584799949701329,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0.432276099749388,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,1.33476084572875,1.17935397067922,1.34917267430912,1.42002084971952,0.964708639009667,1.01850340712568,0.863088412352432,1.13494658742525,0,0,1.48856379067401,0,0,0,0,1.10851914099963,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0,0.390267295715598,0.945810864637146,0.44292937929755,0.797273843287435,0.327726629431476,0.863424909329478,1.01254341007058,0,3.26343410291226,0,0.275936746304732,0.160550589987792,0,0.491804836130026,1.00988370881749,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0.989820737835213,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.720244376125241,0.646793418913773,0.643011105094777,0.886701168211368,0.891844088010353,0.658196082408484,0.608929898229199,0.469343416127421,0,0,1.31909002353184,0,0.422190474497091,0.358117032009409,0,0.291480836629851,0.18542530201051,2.39219233116994,1.23832120777933,2.03713980106683,1.69531611304222,3.55404992074665,1.37266903923914,1.01987057996313,1.39951452323658,1.52019971184866,0.954670618015114,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0.26175594198403,0,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,10.1123558601017,0.810900861160657,1.33524244314275,0.909445760844565,5.19177417435696,6.35780335300048,6.00977247599844,5.61220203263393,6.25991989678515,7.23964663222498,9.17518284745249,9.55087231249574,9.04391311419097,9.58390597888865,0.906921534460845,0,0.0897138566094757,0,0.19318959403219,0.93841237725591,1.83151624267265,0.643105137237198,0.501572104035363,0.564751842617067,0,0,0.171853182343688,1.37016503954128,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0,1.01078884705519,0,0.188626341386076,0.37456602987953,0,0.402048282689293,0,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0,0.476872379894642,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.492522411877817,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0.429742108096597,0.57386499620653,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,6.32704284863724,13.3749286044083,11.9372908424217,2.73948749160808,3.35043067780413,9.75844160607873,7.51815460803378,3.66420737997229,3.03712901084739,2.79824751251259,1.26184866143295,1.09691546884591,1.27316895539409,0.17008658030214,1.19149141441062,1.82839852397255,0.319984845586813,0,0,0,0,0.190023419456374,0,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0,0,7.11503772252743,2.3440060335714,7.32933241563318,7.64700934440319,8.87959130445979,7.76816564849846,2.26614272356039,2.53442328048786,1.46837401729345,1.56478268869608,0,0.219686182734472,0.388859798148567,0,0,1.34226084846189,13.7818806982155,5.37750078627942,1.02903774414379,0.85960031981627,0.515672092277442,0,0,0,0,0,1.3498495759221,0.988866362566974,3.5524005747305,3.29560121570245,0.384218305321555,0,0,0,0.856952953211411,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0.427115042397309,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0.340860645156116,0.519572009205738,0,0.281686839553361,3.84979432242953,7.64415719119937,7.11066703153331,0,0,0,0.79928715803342,3.6251303710604,0.445326417194474,0.346970653532272,0,0.461230994512117,0,0,0.376999773989026,0,0.722996784599558,1.76922110389975,0.808834249737046,1.32504911076236,0.969750506270444,0,0,0,0,1.07833612055328,0.599902730993408,1.01656181658452,0.299581278809645,0,0.125654352112864,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,0.746441823660558,0,0.420883711772948,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,1.42081749697796,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.492502392237286,0.243206428637567,0.584799949701329,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0.432276099749388,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,1.33476084572875,1.17935397067922,1.34917267430912,1.42002084971952,0.964708639009667,1.01850340712568,0.863088412352432,1.13494658742525,0,0,1.48856379067401,0,0,0,0,1.10851914099963,0.189491411770485,0,0.169745085775188,0.469380496577004,0,0,0.390267295715598,0.945810864637146,0.44292937929755,0.797273843287435,0.327726629431476,0.863424909329478,1.01254341007058,0,3.26343410291226,0,0.275936746304732,0.160550589987792,0,0.491804836130026,1.00988370881749,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0.989820737835213,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0.720244376125241,0.646793418913773,0.643011105094777,0.886701168211368,0.891844088010353,0.658196082408484,0.608929898229199,0.469343416127421,0,0,1.31909002353184,0,0.422190474497091,0.358117032009409,0,0.291480836629851,0.18542530201051,2.39219233116994,1.23832120777933,2.03713980106683,1.69531611304222,3.55404992074665,1.37266903923914,1.01987057996313,1.39951452323658,1.52019971184866,0.954670618015114,0,0.203319467126849,0.216010681643603,0,0,0,0.165306911450672,0.26175594198403,0,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,10.1123558601017,0.810900861160657,1.33524244314275,0.909445760844565,5.19177417435696,6.35780335300048,6.00977247599844,5.61220203263393,6.25991989678515,7.23964663222498,9.17518284745249,9.55087231249574,9.04391311419097,9.58390597888865,0.906921534460845,0,0.0897138566094757,0,0.19318959403219,0.93841237725591,1.83151624267265,0.643105137237198,0.501572104035363,0.564751842617067,0,0,0.171853182343688,1.37016503954128,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.551530525350042,0.222246727801615,0.206035057238894,0,1.01078884705519,0,0.188626341386076,0.37456602987953,0,0.402048282689293,0,0.347652977834566,0.192909220463705,0.824171801606613,0.147198920134397,0.342869252385415,0,0.476872379894642,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.492522411877817,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0.429742108096597,0.57386499620653,0.220591419119515,0.463735671240843 | ||
|short_description=p5@Apbb1ip | |||
}} | }} |
Latest revision as of 09:09, 26 September 2015
Short description: | p5@Apbb1ip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Apbb1ip_5end |
Coexpression cluster: | MCL_coexpression_mm9:2618 |
Association with transcript: | -28bp_to_NM_019456, uc008inl.2, uc008inm.2, uc008inn.2, uc008ino.2_5end |
EntrezGene: | Apbb1ip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data