FFCP PHASE1:Mm9::chr1:133914326..133914346,+: Difference between revisions
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{{FFCP|EntrezGene=13714|HGNC=|MCL_coexpression_id=5|UniProt=F6ZCI1|association_with_transcript=-38bp_to_ENSMUST00000147218_5end|description=CAGE_peak_8_at_Elk4_5end|id=chr1:133914326..133914346,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,5.08e-08,9;CL:0000789,5.08e-08,9;CL:0002420,5.08e-08,9;CL:0002419,5.08e-08,9;CL:0000790,5.08e-08,9;CL:0000624,3.29e-07,8;CL:0000542,7.97e-07,13;CL:0000051,7.97e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!2.53e-12!131;UBERON:0009142!2.53e-12!131;UBERON:0000926!4.57e-12!193;UBERON:0004120!4.57e-12!193;UBERON:0006603!4.57e-12!193;UBERON:0005057!1.54e-10!51;UBERON:0000077!2.08e-10!97;UBERON:0001041!4.54e-10!92;UBERON:0001048!5.28e-09!147;UBERON:0001004!6.30e-09!42;UBERON:0000065!9.24e-09!41;UBERON:0003081!9.27e-09!88;UBERON:0002368!2.82e-08!60;UBERON:0004177!3.31e-08!29;UBERON:0002405!6.28e-08!70;UBERON:0002530!7.36e-08!65;UBERON:0000072!1.15e-07!27;UBERON:0009569!1.49e-07!66;UBERON:0003408!4.78e-07!24;UBERON:0006562!5.89e-07!24;UBERON:0001557!5.89e-07!24;UBERON:0001042!5.89e-07!24;UBERON:0008814!5.89e-07!24;UBERON:0009145!5.89e-07!24;UBERON:0002370!6.67e-07!23;UBERON:0000974!6.67e-07!23;UBERON:0004807!6.67e-07!23;UBERON:0005058!6.67e-07!23;UBERON:0003351!6.67e-07!23;UBERON:0009113!6.67e-07!23;UBERON:0003295!6.67e-07!23;UBERON:0009722!6.67e-07!23;UBERON:0005562!6.67e-07!23;UBERON:0007690!6.67e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.36e-12,80;UBERON:0001004,3.38e-11,42;UBERON:0000065,5.54e-11,41;UBERON:0001048,2.43e-10,134;UBERON:0004177,3.55e-10,29;UBERON:0005057,3.55e-10,29;UBERON:0000072,1.24e-09,27;UBERON:0003081,2.55e-09,87;UBERON:0000077,2.64e-09,35;UBERON:0003408,7.73e-09,24;UBERON:0006562,1.02e-08,24;UBERON:0001557,1.02e-08,24;UBERON:0001042,1.02e-08,24;UBERON:0008814,1.02e-08,24;UBERON:0009145,1.02e-08,24;UBERON:0002370,1.18e-08,23;UBERON:0000974,1.18e-08,23;UBERON:0004807,1.18e-08,23;UBERON:0005058,1.18e-08,23;UBERON:0003351,1.18e-08,23;UBERON:0009113,1.18e-08,23;UBERON:0003295,1.18e-08,23;UBERON:0009722,1.18e-08,23;UBERON:0005562,1.18e-08,23;UBERON:0007690,1.18e-08,23;UBERON:0002368,1.92e-08,60;UBERON:0009569,4.43e-08,66;UBERON:0005911,5.06e-08,69;UBERON:0002530,2.50e-07,65;UBERON:0002390,4.63e-07,45;UBERON:0003061,4.63e-07,45;UBERON:0002193,4.89e-07,48;UBERON:0002405,4.89e-07,48;UBERON:0000926,7.93e-07,120;UBERON:0004120,7.93e-07,120;UBERON:0006603,7.93e-07,120;UBERON:0004921,8.01e-07,114;UBERON:0004119,8.97e-07,118;UBERON:0000925,8.97e-07,118;UBERON:0006595,8.97e-07,118;UBERON:0001007,9.90e-07,116;UBERON:0001555,9.90e-07,116;UBERON:0007026,9.90e-07,116|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.60492842261366,0,0,0.233612640595526,1.93684985162364,3.801295498095,4.68129052643987,1.88339765048055,2.55270908785077,2.39681021903688,3.2345548895029,0.666219523631325,1.61980213911861,0,2.05050407482854,2.74228867211478,1.27316895539409,0.680346321208558,0.595745707205312,0.783599367416806,1.11994695955385,0.45881856213434,0,0,0,0.380046838912748,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0.588231488031014,0.683045484958446,0.485510353031154,0.881277725829041,1.52065396829272,0.917733760808408,0,0.872100625521786,0,0.972149495371417,0.279972843250725,0,2.85230430298152,3.62681071005672,3.36093799142464,2.31533492432352,1.43266719969378,2.06268836910977,0.202316460859598,1.5869729378161,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.768436610643109,0.103689612308478,0.945041568321835,0.210324961351382,1.14260393761521,0.662605622854841,0.122490799214954,0.479227355091182,0.919218786610021,0,0.766124028511126,0.614426133024974,0.395658863190582,0.731901148819277,1.56274011167028,0,0,1.22238598221448,1.47314292736834,1.13897344639282,0.186399445825301,1.06016670666458,0.68014404096107,1.44932244350839,0.860423876981386,2.719885334831,1.61910957491345,1.94932925234301,3.58421509677868,0.280888840263504,1.36344258062446,0.519572009205738,0.35333957451034,0.563373679106722,2.56652954828636,0,0,2.16491041011214,1.01343946190039,1.51657333504435,1.02765491747154,1.29468941823586,1.1875371125186,1.38788261412909,0.304465478312141,0.691846491768175,1.50722640552623,1.17588707135705,1.25666591329675,1.23597483867187,0.289198713839823,2.65383165584962,1.45590164952668,1.54589062922275,1.93950101254089,1.86391761218122,0.292780797011547,0.41889341362691,0.766371165625774,0.718890747035522,0,1.27070227073065,0.599162557619291,0,0.251308704225729,0.521472960576829,0.511430914660661,0,0,1.12023300235348,1.61729061793121,1.51633655060205,0.210441855886474,1.43132487258974,0.229902104433473,0.720248519221397,0.60281927134286,0.680364991513279,0.768682321709099,0.187403449119458,1.03481348295606,0.862271971731369,0.756424320671277,0.879755620819744,0.43839146485515,0,1.74126083261083,1.23469281844766,0,0,0.257347907114715,0.852490498186778,0.621377317606506,0.938104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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13714 | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=F6ZCI1 | |||
|association_with_transcript=-38bp_to_ENSMUST00000147218_5end | |||
|cluster_id=chr1:133914326..133914346,+ | |||
|description=CAGE_peak_8_at_Elk4_5end | |||
|id=chr1:133914326..133914346,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.08e-08,9;CL:0000789,5.08e-08,9;CL:0002420,5.08e-08,9;CL:0002419,5.08e-08,9;CL:0000790,5.08e-08,9;CL:0000624,3.29e-07,8;CL:0000542,7.97e-07,13;CL:0000051,7.97e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.53e-12!131;UBERON:0009142!2.53e-12!131;UBERON:0000926!4.57e-12!193;UBERON:0004120!4.57e-12!193;UBERON:0006603!4.57e-12!193;UBERON:0005057!1.54e-10!51;UBERON:0000077!2.08e-10!97;UBERON:0001041!4.54e-10!92;UBERON:0001048!5.28e-09!147;UBERON:0001004!6.30e-09!42;UBERON:0000065!9.24e-09!41;UBERON:0003081!9.27e-09!88;UBERON:0002368!2.82e-08!60;UBERON:0004177!3.31e-08!29;UBERON:0002405!6.28e-08!70;UBERON:0002530!7.36e-08!65;UBERON:0000072!1.15e-07!27;UBERON:0009569!1.49e-07!66;UBERON:0003408!4.78e-07!24;UBERON:0006562!5.89e-07!24;UBERON:0001557!5.89e-07!24;UBERON:0001042!5.89e-07!24;UBERON:0008814!5.89e-07!24;UBERON:0009145!5.89e-07!24;UBERON:0002370!6.67e-07!23;UBERON:0000974!6.67e-07!23;UBERON:0004807!6.67e-07!23;UBERON:0005058!6.67e-07!23;UBERON:0003351!6.67e-07!23;UBERON:0009113!6.67e-07!23;UBERON:0003295!6.67e-07!23;UBERON:0009722!6.67e-07!23;UBERON:0005562!6.67e-07!23;UBERON:0007690!6.67e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,2.36e-12,80;UBERON:0001004,3.38e-11,42;UBERON:0000065,5.54e-11,41;UBERON:0001048,2.43e-10,134;UBERON:0004177,3.55e-10,29;UBERON:0005057,3.55e-10,29;UBERON:0000072,1.24e-09,27;UBERON:0003081,2.55e-09,87;UBERON:0000077,2.64e-09,35;UBERON:0003408,7.73e-09,24;UBERON:0006562,1.02e-08,24;UBERON:0001557,1.02e-08,24;UBERON:0001042,1.02e-08,24;UBERON:0008814,1.02e-08,24;UBERON:0009145,1.02e-08,24;UBERON:0002370,1.18e-08,23;UBERON:0000974,1.18e-08,23;UBERON:0004807,1.18e-08,23;UBERON:0005058,1.18e-08,23;UBERON:0003351,1.18e-08,23;UBERON:0009113,1.18e-08,23;UBERON:0003295,1.18e-08,23;UBERON:0009722,1.18e-08,23;UBERON:0005562,1.18e-08,23;UBERON:0007690,1.18e-08,23;UBERON:0002368,1.92e-08,60;UBERON:0009569,4.43e-08,66;UBERON:0005911,5.06e-08,69;UBERON:0002530,2.50e-07,65;UBERON:0002390,4.63e-07,45;UBERON:0003061,4.63e-07,45;UBERON:0002193,4.89e-07,48;UBERON:0002405,4.89e-07,48;UBERON:0000926,7.93e-07,120;UBERON:0004120,7.93e-07,120;UBERON:0006603,7.93e-07,120;UBERON:0004921,8.01e-07,114;UBERON:0004119,8.97e-07,118;UBERON:0000925,8.97e-07,118;UBERON:0006595,8.97e-07,118;UBERON:0001007,9.90e-07,116;UBERON:0001555,9.90e-07,116;UBERON:0007026,9.90e-07,116 | |||
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| |||
|short_description=p8@Elk4 | |||
}} |
Latest revision as of 08:53, 26 September 2015
Short description: | p8@Elk4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Elk4_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | -38bp_to_ENSMUST00000147218_5end |
EntrezGene: | Elk4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.08e-08 | 9 |
alpha-beta T cell | 5.08e-08 | 9 |
immature T cell | 5.08e-08 | 9 |
mature T cell | 5.08e-08 | 9 |
immature alpha-beta T cell | 5.08e-08 | 9 |
CD4-positive, alpha-beta T cell | 3.29e-07 | 8 |
lymphocyte | 7.97e-07 | 13 |
common lymphoid progenitor | 7.97e-07 | 13 |