Personal tools

FFCP PHASE1:Mm9::chr5:77695390..77695414,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19712
|EntrezGene=19712
|HGNC=
|HGNC=
|MCL_coexpression_id=123
|MCL_coexpression_id=123
|TSSclassifier=NA
|UniProt=Q8VIG1
|UniProt=Q8VIG1
|association_with_transcript=169bp_to_ENSMUST00000113449,uc008xwa.2_5end
|association_with_transcript=169bp_to_ENSMUST00000113449,uc008xwa.2_5end
|cluster_id=chr5:77695390..77695414,+
|description=CAGE_peak_2_at_Rest_5end
|description=CAGE_peak_2_at_Rest_5end
|id=chr5:77695390..77695414,+
|id=chr5:77695390..77695414,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,2.26e-07,32;CL:0002032,2.26e-07,32;CL:0000037,2.26e-07,32;CL:0000837,2.26e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.08e-11!29;UBERON:0006562!4.12e-09!24;UBERON:0001557!4.12e-09!24;UBERON:0001042!4.12e-09!24;UBERON:0008814!4.12e-09!24;UBERON:0009145!4.12e-09!24;UBERON:0002370!4.59e-09!23;UBERON:0000974!4.59e-09!23;UBERON:0004807!4.59e-09!23;UBERON:0005058!4.59e-09!23;UBERON:0003351!4.59e-09!23;UBERON:0009113!4.59e-09!23;UBERON:0003295!4.59e-09!23;UBERON:0009722!4.59e-09!23;UBERON:0005562!4.59e-09!23;UBERON:0007690!4.59e-09!23;UBERON:0000072!2.12e-08!27;UBERON:0003408!3.73e-08!24;UBERON:0002193!5.28e-08!48;UBERON:0000065!2.34e-07!41;UBERON:0003081!2.85e-07!88;UBERON:0002390!3.80e-07!45;UBERON:0003061!3.80e-07!45;UBERON:0001004!8.33e-07!42
|ontology_enrichment_uberon=UBERON:0004177!4.08e-11!29;UBERON:0006562!4.12e-09!24;UBERON:0001557!4.12e-09!24;UBERON:0001042!4.12e-09!24;UBERON:0008814!4.12e-09!24;UBERON:0009145!4.12e-09!24;UBERON:0002370!4.59e-09!23;UBERON:0000974!4.59e-09!23;UBERON:0004807!4.59e-09!23;UBERON:0005058!4.59e-09!23;UBERON:0003351!4.59e-09!23;UBERON:0009113!4.59e-09!23;UBERON:0003295!4.59e-09!23;UBERON:0009722!4.59e-09!23;UBERON:0005562!4.59e-09!23;UBERON:0007690!4.59e-09!23;UBERON:0000072!2.12e-08!27;UBERON:0003408!3.73e-08!24;UBERON:0002193!5.28e-08!48;UBERON:0000065!2.34e-07!41;UBERON:0003081!2.85e-07!88;UBERON:0002390!3.80e-07!45;UBERON:0003061!3.80e-07!45;UBERON:0001004!8.33e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.46e-31,29;UBERON:0005057,1.46e-31,29;UBERON:0002370,8.10e-30,23;UBERON:0000974,8.10e-30,23;UBERON:0004807,8.10e-30,23;UBERON:0005058,8.10e-30,23;UBERON:0003351,8.10e-30,23;UBERON:0009113,8.10e-30,23;UBERON:0003295,8.10e-30,23;UBERON:0009722,8.10e-30,23;UBERON:0005562,8.10e-30,23;UBERON:0007690,8.10e-30,23;UBERON:0002193,5.14e-29,48;UBERON:0002405,5.14e-29,48;UBERON:0002390,1.63e-28,45;UBERON:0003061,1.63e-28,45;UBERON:0006562,2.09e-28,24;UBERON:0003408,2.09e-28,24;UBERON:0001557,2.09e-28,24;UBERON:0001042,2.09e-28,24;UBERON:0008814,2.09e-28,24;UBERON:0009145,2.09e-28,24;UBERON:0000077,2.41e-25,35;UBERON:0000072,8.44e-25,27;UBERON:0007811,1.36e-17,36;UBERON:0003081,5.60e-16,87;UBERON:0000153,8.05e-16,43;UBERON:0000065,5.86e-15,41;UBERON:0001004,1.66e-14,42;UBERON:0000926,5.36e-11,120;UBERON:0004120,5.36e-11,120;UBERON:0006603,5.36e-11,120;UBERON:0003929,3.78e-10,55;UBERON:0002368,5.55e-09,60;UBERON:0000490,5.72e-09,66;UBERON:0001041,1.69e-08,80;UBERON:0002530,5.34e-08,65;UBERON:0005911,2.56e-07,69;UBERON:0000949,7.39e-07,72
|phase1_expression=0,0,0,0,0,0.33575854382378,0.467225281191051,0.903863264091034,1.12630977721333,1.17032263160997,1.19852577757853,0.797721589953364,1.02720437958723,0.34968160967599,0.333109761815663,0.809901069559304,0,3.15462165358238,3.83920414096069,2.12194825899015,0.425216450755349,1.39007331681239,0.783599367416806,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0.7813353445238,1.57057123192139,0,0,0.971020706062307,0.377690453926732,0.405507724878058,0,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,1.51004345451963,0.725362142011344,0.672187598284928,0,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0,0.702222100658759,0.170430322578058,0.779358013808606,0,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0,2.58937883647172,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0.741584903203122,0.289198713839823,0.884610551949874,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0.209446706813455,0,0.718890747035522,1.19980546198682,0.762421362438388,0,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,0.919608417733892,0.360124259610698,0.60281927134286,0.340182495756639,0.12811372028485,0.281105173679186,0.517406741478031,0.646703978798527,0.756424320671277,0.351902248327898,0.43839146485515,0,0.696504333044333,1.02891068203972,0,0,2.05878325691772,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,1.23413690309903,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.584799949701329,0.658650345873152,0.268412837520744,0,0.102904612379284,0,0,0,0,0.515469845288373,0.403367049246685,0.889512175379481,0.760902504450237,0,0.988193728344065,1.00534083520108,0.795825888164603,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.316182685621286,1.18088118383682,0.627994911365499,0.370191491765402,0,0.333690211432188,0.393117990226406,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0.37898282354097,0.977789858652155,0.169745085775188,0.704070744865506,0.502518772325447,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0.819674726883377,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0.566153061577665,0.404810701674894,0,1.18586333383957,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0.582961673259701,0,0.512612642393558,0.82554747185289,0.370389054739423,1.13021074202815,1.0935538217682,1.14389086603261,0.849892149969277,0.839708713941948,0.967399816630967,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0,0,0.781226309063701,0.419437377702843,0.241584120826006,0,3.47612232690996,0,0.616265742988964,1.55904987573354,2.14832034800978,3.57626438606277,2.28371354087941,2.21534290761866,3.73575864808146,2.209997392995,2.92395936896837,4.0932309910696,3.17499077413087,4.32444538071805,0.453460767230423,0,1.16628013592318,0.503653849092235,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.824140228955577,0,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.752875043322645,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.591026894253381,0.818462086339379,0.464810523557898,0,0,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0
|phase1_expression=0,0,0,0,0,0.33575854382378,0.467225281191051,0.903863264091034,1.12630977721333,1.17032263160997,1.19852577757853,0.797721589953364,1.02720437958723,0.34968160967599,0.333109761815663,0.809901069559304,0,3.15462165358238,3.83920414096069,2.12194825899015,0.425216450755349,1.39007331681239,0.783599367416806,0.639969691173627,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0.61506478758457,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0.7813353445238,1.57057123192139,0,0,0.971020706062307,0.377690453926732,0.405507724878058,0,0,0,0.439372365468944,0.194429899074283,0.139986421625363,0,1.51004345451963,0.725362142011344,0.672187598284928,0,0.573066879877513,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,0,0,0.702222100658759,0.170430322578058,0.779358013808606,0,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0,0,2.58937883647172,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0.741584903203122,0.289198713839823,0.884610551949874,0.161766849947409,1.10420759230197,0.484875253135222,0,0,0.209446706813455,0,0.718890747035522,1.19980546198682,0.762421362438388,0,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0.130120442962704,0.919608417733892,0.360124259610698,0.60281927134286,0.340182495756639,0.12811372028485,0.281105173679186,0.517406741478031,0.646703978798527,0.756424320671277,0.351902248327898,0.43839146485515,0,0.696504333044333,1.02891068203972,0,0,2.05878325691772,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,1.23413690309903,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.584799949701329,0.658650345873152,0.268412837520744,0,0.102904612379284,0,0,0,0,0.515469845288373,0.403367049246685,0.889512175379481,0.760902504450237,0,0.988193728344065,1.00534083520108,0.795825888164603,0.779856348476481,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.316182685621286,1.18088118383682,0.627994911365499,0.370191491765402,0,0.333690211432188,0.393117990226406,0.674586337154561,0.202860121388503,0.482354319504834,0.763877555344259,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0.37898282354097,0.977789858652155,0.169745085775188,0.704070744865506,0.502518772325447,0,0.195133647857799,0.157635144106191,0.44292937929755,0.478364305972461,0,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0.819674726883377,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0.566153061577665,0.404810701674894,0,1.18586333383957,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.492422699235184,0.582961673259701,0,0.512612642393558,0.82554747185289,0.370389054739423,1.13021074202815,1.0935538217682,1.14389086603261,0.849892149969277,0.839708713941948,0.967399816630967,0,0.158167996790568,0.406638934253697,0.216010681643603,0,0.87345025498471,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0,0,0.781226309063701,0.419437377702843,0.241584120826006,0,3.47612232690996,0,0.616265742988964,1.55904987573354,2.14832034800978,3.57626438606277,2.28371354087941,2.21534290761866,3.73575864808146,2.209997392995,2.92395936896837,4.0932309910696,3.17499077413087,4.32444538071805,0.453460767230423,0,1.16628013592318,0.503653849092235,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.666740183404846,0.824140228955577,0,0,0.25347929989024,0.565879024158229,0.0936415074698824,0.448176066834085,0.229741875822453,0.476293691283074,0.115884325944855,0,0.824171801606613,0.588795680537589,0.685738504770831,0.354951612318675,0.715308569841963,0.581385666529314,0.752875043322645,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.591026894253381,0.818462086339379,0.464810523557898,0,0,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0
|short_description=p2@Rest
|short_description=p2@Rest
}}
}}

Latest revision as of 05:56, 26 September 2015

Short description:p2@Rest
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rest_5end
Coexpression cluster:MCL_coexpression_mm9:123
Association with transcript: 169bp_to_ENSMUST00000113449, uc008xwa.2_5end
EntrezGene:Rest
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rest

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.28
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.46e-3129
immune organ1.46e-3129
thymus8.10e-3023
neck8.10e-3023
respiratory system epithelium8.10e-3023
hemolymphoid system gland8.10e-3023
pharyngeal epithelium8.10e-3023
thymic region8.10e-3023
pharyngeal gland8.10e-3023
entire pharyngeal arch endoderm8.10e-3023
thymus primordium8.10e-3023
early pharyngeal endoderm8.10e-3023
hemolymphoid system5.14e-2948
immune system5.14e-2948
hematopoietic system1.63e-2845
blood island1.63e-2845
pharynx2.09e-2824
gland of gut2.09e-2824
upper respiratory tract2.09e-2824
chordate pharynx2.09e-2824
pharyngeal arch system2.09e-2824
pharyngeal region of foregut2.09e-2824
mixed endoderm/mesoderm-derived structure2.41e-2535
segment of respiratory tract8.44e-2527
craniocervical region1.36e-1736
lateral plate mesoderm5.60e-1687
anterior region of body8.05e-1643
respiratory tract5.86e-1541
respiratory system1.66e-1442
mesoderm5.36e-11120
mesoderm-derived structure5.36e-11120
presumptive mesoderm5.36e-11120
gut epithelium3.78e-1055
endocrine gland5.55e-0960
unilaminar epithelium5.72e-0966
foregut1.69e-0880
gland5.34e-0865
endo-epithelium2.56e-0769
endocrine system7.39e-0772
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:77695390..77695414,%2B&oldid=4236894"