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FFCP PHASE1:Mm9::chr5:73143971..73144001,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:73143971..73144001,-
|DHSsupport=NA
|short_description=p2@Txk
|DPIdataset=NA
|description=CAGE_peak_2_at_Txk_5end
|association_with_transcript=10bp_to_ENSMUST00000113604,NM_001122754,uc008xrx.2,uc008xry.2,uc008xrz.1,uc012dwz.1_5end
|EntrezGene=22165
|EntrezGene=22165
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=P42682
|UniProt=P42682
|association_with_transcript=10bp_to_ENSMUST00000113604,NM_001122754,uc008xrx.2,uc008xry.2,uc008xrz.1,uc012dwz.1_5end
|cluster_id=chr5:73143971..73144001,-
|description=CAGE_peak_2_at_Txk_5end
|id=chr5:73143971..73144001,-
|ontology_enrichment_celltype=CL:0000838!2.65e-10!12;CL:0000084!5.37e-10!11;CL:0000827!5.37e-10!11;CL:0000542!4.10e-09!13;CL:0000051!4.10e-09!13;CL:0000791!9.86e-09!9;CL:0000789!9.86e-09!9;CL:0002420!9.86e-09!9;CL:0002419!9.86e-09!9;CL:0000790!9.86e-09!9;CL:0002031!6.85e-08!25;CL:0000624!8.16e-08!8
|ontology_enrichment_celltype_v019_2=CL:0000084,1.88e-17,11;CL:0000827,1.88e-17,11;CL:0000838,9.46e-16,12;CL:0000791,4.50e-15,9;CL:0000789,4.50e-15,9;CL:0002420,4.50e-15,9;CL:0002419,4.50e-15,9;CL:0000790,4.50e-15,9;CL:0000542,2.60e-14,13;CL:0000051,2.60e-14,13;CL:0002031,1.98e-13,25;CL:0000624,2.39e-13,8;CL:0000738,2.89e-10,17;CL:0002087,2.89e-10,17;CL:0000893,4.46e-10,6;CL:0002489,4.46e-10,6;CL:0000898,4.46e-10,6;CL:0000809,4.46e-10,6;CL:0000810,4.46e-10,6;CL:0000895,4.46e-10,6;CL:0000808,4.46e-10,6;CL:0000894,4.46e-10,6;CL:0000806,4.46e-10,6;CL:0000807,4.46e-10,6;CL:0000805,4.46e-10,6;CL:0002425,4.46e-10,6;CL:0002436,4.46e-10,6;CL:0002427,4.46e-10,6;CL:0002428,4.46e-10,6;CL:0002429,4.46e-10,6;CL:0002433,4.46e-10,6;CL:0002431,4.46e-10,6;CL:0002432,4.46e-10,6;CL:0000988,1.53e-09,32;CL:0002032,1.53e-09,32;CL:0000037,1.53e-09,32;CL:0000837,1.53e-09,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.95e-17!29;UBERON:0003408!1.47e-14!24;UBERON:0002370!6.61e-14!23;UBERON:0000974!6.61e-14!23;UBERON:0004807!6.61e-14!23;UBERON:0005058!6.61e-14!23;UBERON:0003351!6.61e-14!23;UBERON:0009113!6.61e-14!23;UBERON:0003295!6.61e-14!23;UBERON:0009722!6.61e-14!23;UBERON:0005562!6.61e-14!23;UBERON:0007690!6.61e-14!23;UBERON:0002193!9.68e-14!48;UBERON:0002390!2.98e-13!45;UBERON:0003061!2.98e-13!45;UBERON:0006562!6.17e-13!24;UBERON:0001557!6.17e-13!24;UBERON:0001042!6.17e-13!24;UBERON:0008814!6.17e-13!24;UBERON:0009145!6.17e-13!24;UBERON:0004119!1.01e-12!130;UBERON:0000925!1.01e-12!130;UBERON:0006595!1.01e-12!130;UBERON:0001007!1.70e-12!128;UBERON:0001555!1.70e-12!128;UBERON:0007026!1.70e-12!128;UBERON:0004921!1.84e-12!126;UBERON:0004185!1.84e-12!126;UBERON:0001004!4.83e-12!42;UBERON:0005057!7.03e-12!51;UBERON:0000065!1.86e-11!41;UBERON:0002405!3.73e-11!70;UBERON:0000077!6.51e-11!97;UBERON:0000072!1.71e-10!27;UBERON:0001041!1.84e-10!92;UBERON:0000063!2.70e-08!35;UBERON:0002530!4.00e-08!65;UBERON:0005911!1.08e-07!69;UBERON:0003104!1.12e-07!131;UBERON:0009142!1.12e-07!131;UBERON:0003081!1.24e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.15e-31,29;UBERON:0005057,2.15e-31,29;UBERON:0003408,7.46e-28,24;UBERON:0000077,6.49e-27,35;UBERON:0002370,1.32e-26,23;UBERON:0000974,1.32e-26,23;UBERON:0004807,1.32e-26,23;UBERON:0005058,1.32e-26,23;UBERON:0003351,1.32e-26,23;UBERON:0009113,1.32e-26,23;UBERON:0003295,1.32e-26,23;UBERON:0009722,1.32e-26,23;UBERON:0005562,1.32e-26,23;UBERON:0007690,1.32e-26,23;UBERON:0002390,1.68e-26,45;UBERON:0003061,1.68e-26,45;UBERON:0002193,2.00e-26,48;UBERON:0002405,2.00e-26,48;UBERON:0006562,3.08e-25,24;UBERON:0001557,3.08e-25,24;UBERON:0001042,3.08e-25,24;UBERON:0008814,3.08e-25,24;UBERON:0009145,3.08e-25,24;UBERON:0000072,9.60e-22,27;UBERON:0001004,4.88e-21,42;UBERON:0000065,6.13e-20,41;UBERON:0007811,1.99e-16,36;UBERON:0001041,3.21e-16,80;UBERON:0000153,9.50e-13,43;UBERON:0003081,3.23e-12,87;UBERON:0004119,6.53e-12,118;UBERON:0000925,6.53e-12,118;UBERON:0006595,6.53e-12,118;UBERON:0005911,7.72e-12,69;UBERON:0004921,9.06e-12,114;UBERON:0001007,2.16e-11,116;UBERON:0001555,2.16e-11,116;UBERON:0007026,2.16e-11,116;UBERON:0002530,1.09e-10,65;UBERON:0003929,1.16e-10,55;UBERON:0002368,2.99e-09,60;UBERON:0000949,3.49e-08,72;UBERON:0000490,7.45e-08,66;UBERON:0000926,3.43e-07,120;UBERON:0004120,3.43e-07,120;UBERON:0006603,3.43e-07,120;UBERON:0001048,3.95e-07,134
|phase1_expression=0,0,0,0,0,0,0,37.0583938277324,22.9485617107217,33.9393563166891,2.73948749160808,2.23362045186942,72.9315109506936,67.401130265047,1.66554880907831,1.61980213911861,0.699561878128147,7.25562980323947,8.91243818437302,3.39511721438424,1.61582251287033,2.87943758482567,4.4403964153619,0,0.45881856213434,0,0,0,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.671130424230945,56.5782470768849,77.9737614010516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.59857431606684,37.0281173615456,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.722996784599558,0.884610551949874,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583826711835847,0,0.656669856316381,0.324275238183423,0.292399974850665,0.658650345873152,0.134206418760372,0,0,6.60837565967596,0.793351699990633,0,0,0.515469845288373,0,0,0.190225626112559,1.42358718463353,0.494096864172033,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.864552199498777,1.1948476395262,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,1.1858105083486,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0,4.31304619582064,2.97712758134803,0.936113019343682,0.505157755894224,0,0,4.43407656399851,0,0,0,0.234690248288502,0.335012514883631,0,0,0.630540576424764,0.664394068946325,1.75400245523236,3.27726629431476,2.93564469172023,2.16973587872267,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,2.65490276679926,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0,3.98941903708308,0,0.441056796109924,0,0,0,0,0,0.291480836629851,0,4.95525554313773,0.206386867963223,1.48155621895769,1.50694765603753,3.8274383761887,5.94823250336959,0,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0,0,0.41326727862668,0,1.03691978633434,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,41.3974568022914,5.27085559754427,7.49789987303239,7.40548690973432,13.9640822620636,25.6298947667832,25.8420216467933,27.1748730001222,21.0010215892147,28.8061729155899,30.348681726189,37.2289104425854,36.0794406151235,53.7633750035217,0,0,0,0,0.386379188064381,4.69206188627955,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0.441182838239031,0
|phase1_expression=0,0,0,0,0,0,0,37.0583938277324,22.9485617107217,33.9393563166891,2.73948749160808,2.23362045186942,72.9315109506936,67.401130265047,1.66554880907831,1.61980213911861,0.699561878128147,7.25562980323947,8.91243818437302,3.39511721438424,1.61582251287033,2.87943758482567,4.4403964153619,0,0.45881856213434,0,0,0,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.671130424230945,56.5782470768849,77.9737614010516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,1.59857431606684,37.0281173615456,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.722996784599558,0.884610551949874,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583826711835847,0,0.656669856316381,0.324275238183423,0.292399974850665,0.658650345873152,0.134206418760372,0,0,6.60837565967596,0.793351699990633,0,0,0.515469845288373,0,0,0.190225626112559,1.42358718463353,0.494096864172033,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.864552199498777,1.1948476395262,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,1.1858105083486,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0,4.31304619582064,2.97712758134803,0.936113019343682,0.505157755894224,0,0,4.43407656399851,0,0,0,0.234690248288502,0.335012514883631,0,0,0.630540576424764,0.664394068946325,1.75400245523236,3.27726629431476,2.93564469172023,2.16973587872267,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.494910368917606,2.65490276679926,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0,0,0,0,0,3.98941903708308,0,0.441056796109924,0,0,0,0,0,0.291480836629851,0,4.95525554313773,0.206386867963223,1.48155621895769,1.50694765603753,3.8274383761887,5.94823250336959,0,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0,0,0.41326727862668,0,1.03691978633434,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,41.3974568022914,5.27085559754427,7.49789987303239,7.40548690973432,13.9640822620636,25.6298947667832,25.8420216467933,27.1748730001222,21.0010215892147,28.8061729155899,30.348681726189,37.2289104425854,36.0794406151235,53.7633750035217,0,0,0,0,0.386379188064381,4.69206188627955,0.36630324853453,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.859484216193193,0.191288332068843,0.441182838239031,0
|short_description=p2@Txk
}}
}}

Latest revision as of 04:56, 26 September 2015

Short description:p2@Txk
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Txk_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 10bp_to_ENSMUST00000113604, NM_001122754, uc008xrx.2, uc008xry.2, uc008xrz.1, uc012dwz.1_5end
EntrezGene:Txk
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Txk

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E937.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F233.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E472.93
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E867.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I956.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A177.97
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H937.03
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B541.40
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I27.50
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C113.96
thymus, embryo E18.CNhs10595.1273-19G425.63
thymus, neonate N02.CNhs11181.1541-43F825.84
thymus, neonate N03.CNhs11137.2104-43C727.17
thymus, neonate N06.CNhs11197.681-26C421.00
thymus, neonate N07.CNhs11211.713-19D328.81
thymus, neonate N10.CNhs11194.748-24E430.35
thymus, neonate N20.CNhs11186.820-7A237.23
thymus, neonate N25.CNhs11125.1362-25G736.08
thymus, neonate N30.CNhs11132.1393-42G253.76
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell1.88e-1711
pro-T cell1.88e-1711
lymphoid lineage restricted progenitor cell9.46e-1612
mature alpha-beta T cell4.50e-159
alpha-beta T cell4.50e-159
immature T cell4.50e-159
mature T cell4.50e-159
immature alpha-beta T cell4.50e-159
lymphocyte2.60e-1413
common lymphoid progenitor2.60e-1413
hematopoietic lineage restricted progenitor cell1.98e-1325
CD4-positive, alpha-beta T cell2.39e-138
leukocyte2.89e-1017
nongranular leukocyte2.89e-1017
thymocyte4.46e-106
double negative thymocyte4.46e-106
naive T cell4.46e-106
double-positive, alpha-beta thymocyte4.46e-106
CD4-positive, alpha-beta thymocyte4.46e-106
naive thymus-derived CD4-positive, alpha-beta T cell4.46e-106
DN4 thymocyte4.46e-106
DN1 thymic pro-T cell4.46e-106
DN2 thymocyte4.46e-106
DN3 thymocyte4.46e-106
immature single positive thymocyte4.46e-106
early T lineage precursor4.46e-106
mature CD4 single-positive thymocyte4.46e-106
resting double-positive thymocyte4.46e-106
double-positive blast4.46e-106
CD69-positive double-positive thymocyte4.46e-106
CD69-positive, CD4-positive single-positive thymocyte4.46e-106
CD4-positive, CD8-intermediate double-positive thymocyte4.46e-106
CD24-positive, CD4 single-positive thymocyte4.46e-106
hematopoietic cell1.53e-0932
hematopoietic oligopotent progenitor cell1.53e-0932
hematopoietic stem cell1.53e-0932
hematopoietic multipotent progenitor cell1.53e-0932

Uber anatomy
Ontology termp-valuen
hemopoietic organ2.15e-3129
immune organ2.15e-3129
gland of gut7.46e-2824
mixed endoderm/mesoderm-derived structure6.49e-2735
thymus1.32e-2623
neck1.32e-2623
respiratory system epithelium1.32e-2623
hemolymphoid system gland1.32e-2623
pharyngeal epithelium1.32e-2623
thymic region1.32e-2623
pharyngeal gland1.32e-2623
entire pharyngeal arch endoderm1.32e-2623
thymus primordium1.32e-2623
early pharyngeal endoderm1.32e-2623
hematopoietic system1.68e-2645
blood island1.68e-2645
hemolymphoid system2.00e-2648
immune system2.00e-2648
pharynx3.08e-2524
upper respiratory tract3.08e-2524
chordate pharynx3.08e-2524
pharyngeal arch system3.08e-2524
pharyngeal region of foregut3.08e-2524
segment of respiratory tract9.60e-2227
respiratory system4.88e-2142
respiratory tract6.13e-2041
craniocervical region1.99e-1636
foregut3.21e-1680
anterior region of body9.50e-1343
lateral plate mesoderm3.23e-1287
endoderm-derived structure6.53e-12118
endoderm6.53e-12118
presumptive endoderm6.53e-12118
endo-epithelium7.72e-1269
subdivision of digestive tract9.06e-12114
digestive system2.16e-11116
digestive tract2.16e-11116
primitive gut2.16e-11116
gland1.09e-1065
gut epithelium1.16e-1055
endocrine gland2.99e-0960
endocrine system3.49e-0872
unilaminar epithelium7.45e-0866
mesoderm3.43e-07120
mesoderm-derived structure3.43e-07120
presumptive mesoderm3.43e-07120
primordium3.95e-07134
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