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FFCP PHASE1:Mm9::chr7:133512995..133513010,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16797
|EntrezGene=16797
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=O54957,Q546H1
|UniProt=O54957,Q546H1
|association_with_transcript=37bp_to_NM_010689,uc009jqx.1_5end
|association_with_transcript=37bp_to_NM_010689,uc009jqx.1_5end
|cluster_id=chr7:133512995..133513010,-
|description=CAGE_peak_3_at_Lat_5end
|description=CAGE_peak_3_at_Lat_5end
|id=chr7:133512995..133513010,-
|id=chr7:133512995..133513010,-
|ontology_enrichment_celltype=CL:0000084!1.04e-09!11;CL:0000827!1.04e-09!11;CL:0000838!2.12e-09!12;CL:0000791!1.24e-08!9;CL:0000789!1.24e-08!9;CL:0002420!1.24e-08!9;CL:0002419!1.24e-08!9;CL:0000790!1.24e-08!9;CL:0000542!3.01e-08!13;CL:0000051!3.01e-08!13;CL:0000624!8.16e-08!8;CL:0002031!6.50e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000084,1.98e-19,11;CL:0000827,1.98e-19,11;CL:0000838,1.45e-17,12;CL:0000791,4.57e-17,9;CL:0000789,4.57e-17,9;CL:0002420,4.57e-17,9;CL:0002419,4.57e-17,9;CL:0000790,4.57e-17,9;CL:0000542,5.48e-16,13;CL:0000051,5.48e-16,13;CL:0000624,2.82e-15,8;CL:0002031,4.21e-15,25;CL:0000988,8.90e-14,32;CL:0002032,8.90e-14,32;CL:0000037,8.90e-14,32;CL:0000837,8.90e-14,32;CL:0000893,9.90e-12,6;CL:0002489,9.90e-12,6;CL:0000898,9.90e-12,6;CL:0000809,9.90e-12,6;CL:0000810,9.90e-12,6;CL:0000895,9.90e-12,6;CL:0000808,9.90e-12,6;CL:0000894,9.90e-12,6;CL:0000806,9.90e-12,6;CL:0000807,9.90e-12,6;CL:0000805,9.90e-12,6;CL:0002425,9.90e-12,6;CL:0002436,9.90e-12,6;CL:0002427,9.90e-12,6;CL:0002428,9.90e-12,6;CL:0002429,9.90e-12,6;CL:0002433,9.90e-12,6;CL:0002431,9.90e-12,6;CL:0002432,9.90e-12,6;CL:0000738,1.50e-11,17;CL:0002087,1.50e-11,17;CL:0002320,3.75e-08,46;CL:0000134,3.75e-08,46
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.80e-15!29;UBERON:0003408!1.10e-13!24;UBERON:0002370!4.15e-13!23;UBERON:0000974!4.15e-13!23;UBERON:0004807!4.15e-13!23;UBERON:0005058!4.15e-13!23;UBERON:0003351!4.15e-13!23;UBERON:0009113!4.15e-13!23;UBERON:0003295!4.15e-13!23;UBERON:0009722!4.15e-13!23;UBERON:0005562!4.15e-13!23;UBERON:0007690!4.15e-13!23;UBERON:0002193!1.48e-12!48;UBERON:0002390!2.75e-12!45;UBERON:0003061!2.75e-12!45;UBERON:0006562!3.94e-12!24;UBERON:0001557!3.94e-12!24;UBERON:0001042!3.94e-12!24;UBERON:0008814!3.94e-12!24;UBERON:0009145!3.94e-12!24;UBERON:0005057!6.00e-11!51;UBERON:0002405!1.57e-10!70;UBERON:0001004!5.21e-10!42;UBERON:0000072!1.11e-09!27;UBERON:0000065!1.65e-09!41;UBERON:0003081!2.32e-08!88
|ontology_enrichment_uberon_v019_2=UBERON:0003408,9.56e-31,24;UBERON:0002370,1.83e-29,23;UBERON:0000974,1.83e-29,23;UBERON:0004807,1.83e-29,23;UBERON:0005058,1.83e-29,23;UBERON:0003351,1.83e-29,23;UBERON:0009113,1.83e-29,23;UBERON:0003295,1.83e-29,23;UBERON:0009722,1.83e-29,23;UBERON:0005562,1.83e-29,23;UBERON:0007690,1.83e-29,23;UBERON:0004177,2.03e-29,29;UBERON:0005057,2.03e-29,29;UBERON:0006562,5.56e-28,24;UBERON:0001557,5.56e-28,24;UBERON:0001042,5.56e-28,24;UBERON:0008814,5.56e-28,24;UBERON:0009145,5.56e-28,24;UBERON:0002390,1.40e-25,45;UBERON:0003061,1.40e-25,45;UBERON:0002193,1.62e-25,48;UBERON:0002405,1.62e-25,48;UBERON:0000072,3.36e-24,27;UBERON:0000077,3.36e-23,35;UBERON:0001004,4.94e-23,42;UBERON:0000065,7.00e-22,41;UBERON:0007811,2.09e-18,36;UBERON:0000153,2.03e-14,43;UBERON:0001041,1.70e-12,80;UBERON:0002530,3.13e-11,65;UBERON:0005911,4.11e-11,69;UBERON:0003081,2.09e-10,87;UBERON:0003929,6.56e-10,55;UBERON:0002368,1.59e-09,60;UBERON:0002384,3.75e-08,46;UBERON:0000490,2.44e-07,66;UBERON:0004921,4.17e-07,114;UBERON:0000949,5.45e-07,72;UBERON:0001007,7.44e-07,116;UBERON:0001555,7.44e-07,116;UBERON:0007026,7.44e-07,116
|phase1_expression=0,0,0,0,0,0,0,68.8227313943601,80.671937792905,77.7094227389018,19.0051944730311,16.831925548016,90.9075875934702,93.1901489786512,2.33176833270964,2.63217847606774,0,6.94016763788123,5.75880621144103,2.97072756258621,3.23164502574065,3.3758923408301,1.30599894569468,0.319984845586813,0,0,0,0,0,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,85.5927327573386,84.6956373839009,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530083353332288,0,0.289864488701678,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.37020655662872,20.9739685754209,1.03909497345377,0.173485326766136,0,0,0,0,0,0,0.289198713839823,2.65383165584962,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,1.02182822083437,1.67741174308288,1.19980546198682,0.635351135365324,0,0,0,0,0.255715457330331,0,0,0,0.746441823660558,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0.431135985865684,0,0,0,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0,0.324275238183423,0.730999937126662,0.219550115291051,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0.246794327843601,0,1.00107063429656,0.786235980452812,0.899448449539415,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,1.17254380209271,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,1.3109065177259,1.03610989119537,1.44649058581512,0,0.54390568381871,1.47529281905711,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0,0.119372344003136,0.164140899745061,0.582961673259701,0,4.95525554313773,0.206386867963223,0.185194527369712,0.941842285023455,2.46049609897845,2.51655990527175,4.58941760983409,7.55737842547753,7.73919853304773,0,0,0,0,0,0,0,0.0826534557253359,0,0,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,85.0069914489799,7.70355818102624,14.8930887889,23.9054314279143,28.2862179154621,46.8887997283785,37.5009802502303,49.1806125491342,40.9923786789479,39.0178850073599,48.5982212359571,59.839138774208,52.8203010605409,59.1397125038739,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.578727661391115,0,0,1.02860775715625,0,0.953744759789284,0.145346416632329,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0.619747364743864,0.964533054905707,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,68.8227313943601,80.671937792905,77.7094227389018,19.0051944730311,16.831925548016,90.9075875934702,93.1901489786512,2.33176833270964,2.63217847606774,0,6.94016763788123,5.75880621144103,2.97072756258621,3.23164502574065,3.3758923408301,1.30599894569468,0.319984845586813,0,0,0,0,0,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,85.5927327573386,84.6956373839009,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530083353332288,0,0.289864488701678,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,1.37020655662872,20.9739685754209,1.03909497345377,0.173485326766136,0,0,0,0,0,0,0.289198713839823,2.65383165584962,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,1.02182822083437,1.67741174308288,1.19980546198682,0.635351135365324,0,0,0,0,0.255715457330331,0,0,0,0.746441823660558,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0.431135985865684,0,0,0,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0,0.324275238183423,0.730999937126662,0.219550115291051,0.134206418760372,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0.246794327843601,0,1.00107063429656,0.786235980452812,0.899448449539415,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,1.17254380209271,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,1.3109065177259,1.03610989119537,1.44649058581512,0,0.54390568381871,1.47529281905711,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0.441056796109924,0.8244312647074,0.161464426695906,0,0.119372344003136,0.164140899745061,0.582961673259701,0,4.95525554313773,0.206386867963223,0.185194527369712,0.941842285023455,2.46049609897845,2.51655990527175,4.58941760983409,7.55737842547753,7.73919853304773,0,0,0,0,0,0,0,0.0826534557253359,0,0,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0.241584120826006,0,85.0069914489799,7.70355818102624,14.8930887889,23.9054314279143,28.2862179154621,46.8887997283785,37.5009802502303,49.1806125491342,40.9923786789479,39.0178850073599,48.5982212359571,59.839138774208,52.8203010605409,59.1397125038739,0,0,0,0,0.19318959403219,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.578727661391115,0,0,1.02860775715625,0,0.953744759789284,0.145346416632329,0.188218760830661,0.507687647350059,0.548783918618318,0.263069711437843,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0.619747364743864,0.964533054905707,0.249810577937946,0.467863216890817,0.644613162144895,0.57386499620653,0,0.231867835620421
|short_description=p3@Lat
|short_description=p3@Lat
}}
}}

Latest revision as of 20:49, 25 September 2015

Short description:p3@Lat
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lat_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 37bp_to_NM_010689, uc009jqx.1_5end
EntrezGene:Lat
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lat

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E968.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E780.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F277.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E619.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E490.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E893.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I985.59
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A184.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H920.97
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.74
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B585.01
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I214.89
thymus, embryo E16.CNhs11002.456-26C523.91
thymus, embryo E17.CNhs10581.478-18C128.29
thymus, embryo E18.CNhs10595.1273-19G446.89
thymus, neonate N02.CNhs11181.1541-43F837.50
thymus, neonate N03.CNhs11137.2104-43C749.18
thymus, neonate N06.CNhs11197.681-26C440.99
thymus, neonate N07.CNhs11211.713-19D339.02
thymus, neonate N10.CNhs11194.748-24E448.60
thymus, neonate N20.CNhs11186.820-7A259.84
thymus, neonate N25.CNhs11125.1362-25G752.82
thymus, neonate N30.CNhs11132.1393-42G259.14
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell1.98e-1911
pro-T cell1.98e-1911
lymphoid lineage restricted progenitor cell1.45e-1712
mature alpha-beta T cell4.57e-179
alpha-beta T cell4.57e-179
immature T cell4.57e-179
mature T cell4.57e-179
immature alpha-beta T cell4.57e-179
lymphocyte5.48e-1613
common lymphoid progenitor5.48e-1613
CD4-positive, alpha-beta T cell2.82e-158
hematopoietic lineage restricted progenitor cell4.21e-1525
hematopoietic cell8.90e-1432
hematopoietic oligopotent progenitor cell8.90e-1432
hematopoietic stem cell8.90e-1432
hematopoietic multipotent progenitor cell8.90e-1432
thymocyte9.90e-126
double negative thymocyte9.90e-126
naive T cell9.90e-126
double-positive, alpha-beta thymocyte9.90e-126
CD4-positive, alpha-beta thymocyte9.90e-126
naive thymus-derived CD4-positive, alpha-beta T cell9.90e-126
DN4 thymocyte9.90e-126
DN1 thymic pro-T cell9.90e-126
DN2 thymocyte9.90e-126
DN3 thymocyte9.90e-126
immature single positive thymocyte9.90e-126
early T lineage precursor9.90e-126
mature CD4 single-positive thymocyte9.90e-126
resting double-positive thymocyte9.90e-126
double-positive blast9.90e-126
CD69-positive double-positive thymocyte9.90e-126
CD69-positive, CD4-positive single-positive thymocyte9.90e-126
CD4-positive, CD8-intermediate double-positive thymocyte9.90e-126
CD24-positive, CD4 single-positive thymocyte9.90e-126
leukocyte1.50e-1117
nongranular leukocyte1.50e-1117
connective tissue cell3.75e-0846
mesenchymal cell3.75e-0846

Uber anatomy
Ontology termp-valuen
gland of gut9.56e-3124
thymus1.83e-2923
neck1.83e-2923
respiratory system epithelium1.83e-2923
hemolymphoid system gland1.83e-2923
pharyngeal epithelium1.83e-2923
thymic region1.83e-2923
pharyngeal gland1.83e-2923
entire pharyngeal arch endoderm1.83e-2923
thymus primordium1.83e-2923
early pharyngeal endoderm1.83e-2923
hemopoietic organ2.03e-2929
immune organ2.03e-2929
pharynx5.56e-2824
upper respiratory tract5.56e-2824
chordate pharynx5.56e-2824
pharyngeal arch system5.56e-2824
pharyngeal region of foregut5.56e-2824
hematopoietic system1.40e-2545
blood island1.40e-2545
hemolymphoid system1.62e-2548
immune system1.62e-2548
segment of respiratory tract3.36e-2427
mixed endoderm/mesoderm-derived structure3.36e-2335
respiratory system4.94e-2342
respiratory tract7.00e-2241
craniocervical region2.09e-1836
anterior region of body2.03e-1443
foregut1.70e-1280
gland3.13e-1165
endo-epithelium4.11e-1169
lateral plate mesoderm2.09e-1087
gut epithelium6.56e-1055
endocrine gland1.59e-0960
connective tissue3.75e-0846
unilaminar epithelium2.44e-0766
subdivision of digestive tract4.17e-07114
endocrine system5.45e-0772
digestive system7.44e-07116
digestive tract7.44e-07116
primitive gut7.44e-07116
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