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FFCP PHASE1:Mm9::chr19:32787236..32787250,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67979
|EntrezGene=67979
|HGNC=
|HGNC=
|MCL_coexpression_id=102
|TSSclassifier=NA
|UniProt=Q9D5T0
|UniProt=Q9D5T0
|association_with_transcript=-424bp_to_ENSMUST00000070210_5end
|association_with_transcript=-424bp_to_ENSMUST00000070210_5end
|cluster_id=chr19:32787236..32787250,-
|description=CAGE_peak_3_at_Atad1_5end
|description=CAGE_peak_3_at_Atad1_5end
|id=chr19:32787236..32787250,-
|id=chr19:32787236..32787250,-
|ontology_enrichment_celltype=CL:0000838!9.87e-10!12;CL:0000542!1.33e-09!13;CL:0000051!1.33e-09!13;CL:0000084!6.06e-09!11;CL:0000827!6.06e-09!11;CL:0000791!1.83e-08!9;CL:0000789!1.83e-08!9;CL:0002420!1.83e-08!9;CL:0002419!1.83e-08!9;CL:0000790!1.83e-08!9;CL:0000624!1.06e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,3.64e-39,9;CL:0000789,3.64e-39,9;CL:0002420,3.64e-39,9;CL:0002419,3.64e-39,9;CL:0000790,3.64e-39,9;CL:0000838,5.47e-36,12;CL:0000624,5.31e-35,8;CL:0000542,4.18e-33,13;CL:0000051,4.18e-33,13;CL:0000084,8.06e-32,11;CL:0000827,8.06e-32,11;CL:0000893,1.81e-26,6;CL:0002489,1.81e-26,6;CL:0000898,1.81e-26,6;CL:0000809,1.81e-26,6;CL:0000810,1.81e-26,6;CL:0000895,1.81e-26,6;CL:0000808,1.81e-26,6;CL:0000894,1.81e-26,6;CL:0000806,1.81e-26,6;CL:0000807,1.81e-26,6;CL:0000805,1.81e-26,6;CL:0002425,1.81e-26,6;CL:0002436,1.81e-26,6;CL:0002427,1.81e-26,6;CL:0002428,1.81e-26,6;CL:0002429,1.81e-26,6;CL:0002433,1.81e-26,6;CL:0002431,1.81e-26,6;CL:0002432,1.81e-26,6;CL:0000738,5.86e-25,17;CL:0002087,5.86e-25,17;CL:0002031,1.80e-16,25;CL:0000988,3.81e-15,32;CL:0002032,3.81e-15,32;CL:0000037,3.81e-15,32;CL:0000837,3.81e-15,32;CL:0002320,5.38e-14,46;CL:0000134,5.38e-14,46;CL:0000219,1.37e-11,54;CL:0000034,8.39e-09,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000949!3.55e-10!72;UBERON:0002368!3.67e-10!60;UBERON:0003929!4.34e-09!55;UBERON:0002530!6.96e-09!65;UBERON:0003408!3.06e-08!24;UBERON:0000490!3.31e-08!66;UBERON:0005057!6.08e-08!51;UBERON:0000072!9.07e-08!27;UBERON:0002370!9.51e-08!23;UBERON:0000974!9.51e-08!23;UBERON:0004807!9.51e-08!23;UBERON:0005058!9.51e-08!23;UBERON:0003351!9.51e-08!23;UBERON:0009113!9.51e-08!23;UBERON:0003295!9.51e-08!23;UBERON:0009722!9.51e-08!23;UBERON:0005562!9.51e-08!23;UBERON:0007690!9.51e-08!23;UBERON:0006562!4.39e-07!24;UBERON:0001557!4.39e-07!24;UBERON:0001042!4.39e-07!24;UBERON:0008814!4.39e-07!24;UBERON:0009145!4.39e-07!24;UBERON:0005911!7.92e-07!69
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.38e-14,46;UBERON:0002370,4.21e-11,23;UBERON:0000974,4.21e-11,23;UBERON:0004807,4.21e-11,23;UBERON:0005058,4.21e-11,23;UBERON:0003351,4.21e-11,23;UBERON:0009113,4.21e-11,23;UBERON:0003295,4.21e-11,23;UBERON:0009722,4.21e-11,23;UBERON:0005562,4.21e-11,23;UBERON:0007690,4.21e-11,23;UBERON:0003929,7.30e-11,55;UBERON:0006562,1.35e-10,24;UBERON:0003408,1.35e-10,24;UBERON:0001557,1.35e-10,24;UBERON:0001042,1.35e-10,24;UBERON:0008814,1.35e-10,24;UBERON:0009145,1.35e-10,24;UBERON:0002368,8.95e-10,60;UBERON:0000072,2.68e-09,27;UBERON:0002530,7.48e-09,65;UBERON:0000490,1.10e-08,66;UBERON:0004177,1.39e-08,29;UBERON:0005057,1.39e-08,29;UBERON:0005911,3.27e-08,69;UBERON:0000949,8.90e-08,72;UBERON:0000077,6.34e-07,35;UBERON:0001041,8.88e-07,80
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,4.51931632045517,4.36445038670167,3.7450324211519,1.88339765048055,1.67521533890206,4.96482116800497,2.44777126773193,0,0,0,0.788655413395594,0.685572168028694,0,0.17008658030214,0.595745707205312,0.261199789138935,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,4.19456515144341,3.62681071005672,2.68875039313971,0,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.227178579999552,0.0755715601067855,0.869593466105033,0,0.679971333707751,1.07940638327563,1.29955283489534,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.587943535678524,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0.599075622529601,0,0.762421362438388,0,0,0.251308704225729,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.373220911830279,0,0,0.520481771850815,0.689706313300419,0.360124259610698,0.150704817835715,0.136072998302656,0.640568601424249,0.187403449119458,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0.852490498186778,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,1.2731292589071,0,0.648540907100142,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.757736633841335,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0,0.178065603667255,0.488660878060728,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,1.01987057996313,1.81936888020755,1.38199973804424,0,0.158167996790568,0,0,0,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0.524296722128554,0.241584120826006,0,0.316011120628178,0,0.410843828659309,0.51968329191118,0.179026695667481,0.39736270956253,0.841368146639782,0.443068581523732,1.00966449948148,0.914481679859998,0.403304740547362,0.38983152295901,0.577271049841977,1.40252282617883,0,0.443971906748129,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0.365855945745545,0.263069711437843,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.231867835620421
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,4.51931632045517,4.36445038670167,3.7450324211519,1.88339765048055,1.67521533890206,4.96482116800497,2.44777126773193,0,0,0,0.788655413395594,0.685572168028694,0,0.17008658030214,0.595745707205312,0.261199789138935,0,0,0,0.86152399231815,0.215471232685889,0,0,0,0.635030673459631,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,4.19456515144341,3.62681071005672,2.68875039313971,0,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.227178579999552,0.0755715601067855,0.869593466105033,0,0.679971333707751,1.07940638327563,1.29955283489534,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.587943535678524,0,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0.599075622529601,0,0.762421362438388,0,0,0.251308704225729,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.373220911830279,0,0,0.520481771850815,0.689706313300419,0.360124259610698,0.150704817835715,0.136072998302656,0.640568601424249,0.187403449119458,0,0,0,0,0,0,0,0,0,1.40442637462647,0,0.852490498186778,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.268412837520744,0,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,1.2731292589071,0,0.648540907100142,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.757736633841335,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0.234423373184406,0.163934945376675,0,0,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0,0,0.178065603667255,0.488660878060728,0,0,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.775284879504663,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0.341741761595705,0.206386867963223,0,0.188368457004691,0,0,1.01987057996313,1.81936888020755,1.38199973804424,0,0.158167996790568,0,0,0,0.218362563746178,0,0.165306911450672,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0.524296722128554,0.241584120826006,0,0.316011120628178,0,0.410843828659309,0.51968329191118,0.179026695667481,0.39736270956253,0.841368146639782,0.443068581523732,1.00966449948148,0.914481679859998,0.403304740547362,0.38983152295901,0.577271049841977,1.40252282617883,0,0.443971906748129,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0.900642406448441,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0,0.365855945745545,0.263069711437843,0,0.561142271657738,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.231867835620421
|short_description=p3@Atad1
|short_description=p3@Atad1
}}
}}

Latest revision as of 15:18, 25 September 2015

Short description:p3@Atad1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Atad1_5end
Coexpression cluster:MCL_coexpression_mm9:102
Association with transcript: -424bp_to_ENSMUST00000070210_5end
EntrezGene:Atad1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Atad1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.64e-399
alpha-beta T cell3.64e-399
immature T cell3.64e-399
mature T cell3.64e-399
immature alpha-beta T cell3.64e-399
lymphoid lineage restricted progenitor cell5.47e-3612
CD4-positive, alpha-beta T cell5.31e-358
lymphocyte4.18e-3313
common lymphoid progenitor4.18e-3313
T cell8.06e-3211
pro-T cell8.06e-3211
thymocyte1.81e-266
double negative thymocyte1.81e-266
naive T cell1.81e-266
double-positive, alpha-beta thymocyte1.81e-266
CD4-positive, alpha-beta thymocyte1.81e-266
naive thymus-derived CD4-positive, alpha-beta T cell1.81e-266
DN4 thymocyte1.81e-266
DN1 thymic pro-T cell1.81e-266
DN2 thymocyte1.81e-266
DN3 thymocyte1.81e-266
immature single positive thymocyte1.81e-266
early T lineage precursor1.81e-266
mature CD4 single-positive thymocyte1.81e-266
resting double-positive thymocyte1.81e-266
double-positive blast1.81e-266
CD69-positive double-positive thymocyte1.81e-266
CD69-positive, CD4-positive single-positive thymocyte1.81e-266
CD4-positive, CD8-intermediate double-positive thymocyte1.81e-266
CD24-positive, CD4 single-positive thymocyte1.81e-266
leukocyte5.86e-2517
nongranular leukocyte5.86e-2517
hematopoietic lineage restricted progenitor cell1.80e-1625
hematopoietic cell3.81e-1532
hematopoietic oligopotent progenitor cell3.81e-1532
hematopoietic stem cell3.81e-1532
hematopoietic multipotent progenitor cell3.81e-1532
connective tissue cell5.38e-1446
mesenchymal cell5.38e-1446
motile cell1.37e-1154
stem cell8.39e-0997

Uber anatomy
Ontology termp-valuen
connective tissue5.38e-1446
thymus4.21e-1123
neck4.21e-1123
respiratory system epithelium4.21e-1123
hemolymphoid system gland4.21e-1123
pharyngeal epithelium4.21e-1123
thymic region4.21e-1123
pharyngeal gland4.21e-1123
entire pharyngeal arch endoderm4.21e-1123
thymus primordium4.21e-1123
early pharyngeal endoderm4.21e-1123
gut epithelium7.30e-1155
pharynx1.35e-1024
gland of gut1.35e-1024
upper respiratory tract1.35e-1024
chordate pharynx1.35e-1024
pharyngeal arch system1.35e-1024
pharyngeal region of foregut1.35e-1024
endocrine gland8.95e-1060
segment of respiratory tract2.68e-0927
gland7.48e-0965
unilaminar epithelium1.10e-0866
hemopoietic organ1.39e-0829
immune organ1.39e-0829
endo-epithelium3.27e-0869
endocrine system8.90e-0872
mixed endoderm/mesoderm-derived structure6.34e-0735
foregut8.88e-0780
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