FFCP PHASE1:Mm9::chr3:53267588..53267603,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:53267588..53267603,+
|short_description=p5@2810046L04Rik
|description=CAGE_peak_5_at_2810046L04Rik_5end
|association_with_transcript=0bp_to_ENSMUST00000057...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=212127 | |EntrezGene=212127 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TTC7,Q5PRE5,E9PVD6 | |UniProt=Q3TTC7,Q5PRE5,E9PVD6 | ||
|association_with_transcript=0bp_to_ENSMUST00000057705,ENSMUST00000058577,ENSMUST00000094274_5end | |||
|cluster_id=chr3:53267588..53267603,+ | |||
|description=CAGE_peak_5_at_2810046L04Rik_5end | |||
|id=chr3:53267588..53267603,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.02e-10!32;CL:0002032!1.02e-10!32;CL:0000037!1.02e-10!32;CL:0000566!1.02e-10!32;CL:0000837!1.02e-10!32;CL:0000542!1.85e-07!13;CL:0000051!1.85e-07!13;CL:0000838!1.91e-07!12;CL:0000084!2.59e-07!11;CL:0000827!2.59e-07!11;CL:0000791!3.01e-07!9;CL:0000789!3.01e-07!9;CL:0002420!3.01e-07!9;CL:0002419!3.01e-07!9;CL:0000790!3.01e-07!9;CL:0002031!3.31e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.04e-21,32;CL:0002032,8.04e-21,32;CL:0000037,8.04e-21,32;CL:0000837,8.04e-21,32;CL:0000791,2.12e-17,9;CL:0000789,2.12e-17,9;CL:0002420,2.12e-17,9;CL:0002419,2.12e-17,9;CL:0000790,2.12e-17,9;CL:0000624,1.80e-15,8;CL:0002320,1.97e-14,46;CL:0000134,1.97e-14,46;CL:0000084,7.21e-14,11;CL:0000827,7.21e-14,11;CL:0002031,6.06e-13,25;CL:0000838,1.52e-12,12;CL:0000893,1.55e-12,6;CL:0002489,1.55e-12,6;CL:0000898,1.55e-12,6;CL:0000809,1.55e-12,6;CL:0000810,1.55e-12,6;CL:0000895,1.55e-12,6;CL:0000808,1.55e-12,6;CL:0000894,1.55e-12,6;CL:0000806,1.55e-12,6;CL:0000807,1.55e-12,6;CL:0000805,1.55e-12,6;CL:0002425,1.55e-12,6;CL:0002436,1.55e-12,6;CL:0002427,1.55e-12,6;CL:0002428,1.55e-12,6;CL:0002429,1.55e-12,6;CL:0002433,1.55e-12,6;CL:0002431,1.55e-12,6;CL:0002432,1.55e-12,6;CL:0000219,1.80e-11,54;CL:0000542,1.99e-11,13;CL:0000051,1.99e-11,13;CL:0000049,1.24e-10,19;CL:0000738,2.79e-08,17;CL:0002087,2.79e-08,17;CL:0000034,1.01e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.65e-11!45;UBERON:0003061!1.65e-11!45;UBERON:0002193!1.72e-11!48;UBERON:0004177!5.08e-11!29;UBERON:0002405!1.60e-09!70;UBERON:0002370!3.17e-08!23;UBERON:0000974!3.17e-08!23;UBERON:0004807!3.17e-08!23;UBERON:0005058!3.17e-08!23;UBERON:0003351!3.17e-08!23;UBERON:0009113!3.17e-08!23;UBERON:0003295!3.17e-08!23;UBERON:0009722!3.17e-08!23;UBERON:0005562!3.17e-08!23;UBERON:0007690!3.17e-08!23;UBERON:0005057!5.41e-08!51;UBERON:0006562!1.97e-07!24;UBERON:0003408!1.97e-07!24;UBERON:0001557!1.97e-07!24;UBERON:0001042!1.97e-07!24;UBERON:0008814!1.97e-07!24;UBERON:0009145!1.97e-07!24;UBERON:0000072!4.90e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.30e-20,45;UBERON:0003061,9.30e-20,45;UBERON:0002193,4.05e-18,48;UBERON:0002405,4.05e-18,48;UBERON:0004177,2.04e-16,29;UBERON:0005057,2.04e-16,29;UBERON:0002370,7.77e-15,23;UBERON:0000974,7.77e-15,23;UBERON:0004807,7.77e-15,23;UBERON:0005058,7.77e-15,23;UBERON:0003351,7.77e-15,23;UBERON:0009113,7.77e-15,23;UBERON:0003295,7.77e-15,23;UBERON:0009722,7.77e-15,23;UBERON:0005562,7.77e-15,23;UBERON:0007690,7.77e-15,23;UBERON:0002384,1.97e-14,46;UBERON:0006562,4.60e-14,24;UBERON:0003408,4.60e-14,24;UBERON:0001557,4.60e-14,24;UBERON:0001042,4.60e-14,24;UBERON:0008814,4.60e-14,24;UBERON:0009145,4.60e-14,24;UBERON:0000072,9.45e-14,27;UBERON:0000077,7.93e-13,35;UBERON:0003929,8.29e-09,55;UBERON:0007811,3.46e-08,36;UBERON:0003081,4.08e-08,87;UBERON:0000065,9.20e-08,41;UBERON:0002368,1.11e-07,60;UBERON:0001041,1.69e-07,80;UBERON:0001004,1.72e-07,42;UBERON:0002530,9.79e-07,65 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,1.03298658753261,7.46180227403834,5.14941957908386,3.76679530096111,3.11111420081812,1.71200729931206,1.66098764596095,1.66554880907831,1.61980213911861,0,0.630924330716475,1.23402990245165,0,0.255129870453209,0.397163804803541,0.522399578277871,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0.252030129759931,0,6.35030673459631,6.76571266343027,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0,1.76469446409304,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0.503347818173209,2.17608642603403,3.6970317905671,0.771778308107841,0,0.515672092277442,0,0,0,0.338844532069132,0,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0.311068836925433,0.540023753326763,1.26194976810829,0.285650984403804,0,0.122490799214954,0.191690942036473,1.83843757322004,0,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0.151143120213571,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0.776813650941515,0,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,1.76922110389975,0,0.441683036920787,0.969750506270444,0,1.17112318804619,1.04723353406728,0,4.19352935770721,2.39961092397363,2.54140454146129,0.149790639404823,0.457500602818626,0.251308704225729,0.695297280769106,0.511430914660661,0.62336413367868,0,0.203678727700633,0.124406970610093,0,0.631325567659422,0.260240885925407,0,0.180062129805349,0,0.340182495756639,0.512454881139399,0.468508622798644,0,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,0,0.696504333044333,0.205782136407943,0,1.40442637462647,1.80143534980301,1.42081749697796,0.621377317606506,0.234526059981096,0,0,0,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0.841159794256509,0,0,0.264450566663544,0.426576501070468,0,0.515469845288373,0.605050573870028,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0.387904974335251,0.280543279561274,0,0.147610147979602,0.156998727841375,0,0,1.66845105716094,3.34150291692445,2.24862112384854,0.608580364165509,0.964708639009667,0.763877555344259,1.15078454980324,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.18542530201051,0.854354403989263,0.82554747185289,1.11116716421827,1.31857919903284,1.77702496037333,0.915112692826091,2.71965487990169,1.95932033253121,2.21119958087078,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0,0,1.12738587736838,0.448549638131936,0,0.388902376688095,0.387479470433193,0.337912250981556,0.352071715937262,0.39061315453185,0,0,0,0.632022241256357,0.405450430580328,1.02710957164827,1.03936658382236,1.9692936523423,1.58945083825012,1.20195449519969,1.18151621739662,1.00966449948148,1.21930890648,0.806609481094724,0.974578807397524,1.05833025804362,0.584384510907845,0,0.221985953374065,0.448569283047378,0,0.19318959403219,0.563047426353546,0,0,0,0.564751842617067,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.62272408550506,0.798049746802062,0.341467211508268,0.729320151204882,0.628839487883947,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0,0,0.25384382367503,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0.463735671240843 | |phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,1.03298658753261,7.46180227403834,5.14941957908386,3.76679530096111,3.11111420081812,1.71200729931206,1.66098764596095,1.66554880907831,1.61980213911861,0,0.630924330716475,1.23402990245165,0,0.255129870453209,0.397163804803541,0.522399578277871,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0.252030129759931,0,6.35030673459631,6.76571266343027,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,0,0,1.76469446409304,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0.503347818173209,2.17608642603403,3.6970317905671,0.771778308107841,0,0.515672092277442,0,0,0,0.338844532069132,0,0,1.97773272513395,0,0.299600110518405,0.384218305321555,0.311068836925433,0.540023753326763,1.26194976810829,0.285650984403804,0,0.122490799214954,0.191690942036473,1.83843757322004,0,0.383062014255563,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.151452386666368,0.151143120213571,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0.253359865475099,1.01104889002957,0.22836775943812,0.776813650941515,0,0,0.304465478312141,0,0.301445281105245,0.352766121407114,0,0,0,1.76922110389975,0,0.441683036920787,0.969750506270444,0,1.17112318804619,1.04723353406728,0,4.19352935770721,2.39961092397363,2.54140454146129,0.149790639404823,0.457500602818626,0.251308704225729,0.695297280769106,0.511430914660661,0.62336413367868,0,0.203678727700633,0.124406970610093,0,0.631325567659422,0.260240885925407,0,0.180062129805349,0,0.340182495756639,0.512454881139399,0.468508622798644,0,0.431135985865684,0.378212160335639,0.703804496655795,0.219195732427575,0,0.696504333044333,0.205782136407943,0,1.40442637462647,1.80143534980301,1.42081749697796,0.621377317606506,0.234526059981096,0,0,0,0,0.465067889500816,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.402619256281115,0.841159794256509,0,0,0.264450566663544,0.426576501070468,0,0.515469845288373,0.605050573870028,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.571242563048644,0,0.407302655690628,0.387904974335251,0.280543279561274,0,0.147610147979602,0.156998727841375,0,0,1.66845105716094,3.34150291692445,2.24862112384854,0.608580364165509,0.964708639009667,0.763877555344259,1.15078454980324,0.486405680325106,0.274561413188081,1.43768206527355,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.339490171550376,0,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0.252470927204373,0.315508219416257,0,0.646270193198397,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,0,0.18542530201051,0.854354403989263,0.82554747185289,1.11116716421827,1.31857919903284,1.77702496037333,0.915112692826091,2.71965487990169,1.95932033253121,2.21119958087078,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0,0,0,1.12738587736838,0.448549638131936,0,0.388902376688095,0.387479470433193,0.337912250981556,0.352071715937262,0.39061315453185,0,0,0,0.632022241256357,0.405450430580328,1.02710957164827,1.03936658382236,1.9692936523423,1.58945083825012,1.20195449519969,1.18151621739662,1.00966449948148,1.21930890648,0.806609481094724,0.974578807397524,1.05833025804362,0.584384510907845,0,0.221985953374065,0.448569283047378,0,0.19318959403219,0.563047426353546,0,0,0,0.564751842617067,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.62272408550506,0.798049746802062,0.341467211508268,0.729320151204882,0.628839487883947,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0,0,0.25384382367503,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0.463735671240843 | ||
|short_description=p5@2810046L04Rik | |||
}} | }} |
Latest revision as of 14:18, 25 September 2015
Short description: | p5@2810046L04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_2810046L04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000057705, ENSMUST00000058577, ENSMUST00000094274_5end |
EntrezGene: | 2810046L04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.30e-20 | 45 |
blood island | 9.30e-20 | 45 |
hemolymphoid system | 4.05e-18 | 48 |
immune system | 4.05e-18 | 48 |
hemopoietic organ | 2.04e-16 | 29 |
immune organ | 2.04e-16 | 29 |
thymus | 7.77e-15 | 23 |
neck | 7.77e-15 | 23 |
respiratory system epithelium | 7.77e-15 | 23 |
hemolymphoid system gland | 7.77e-15 | 23 |
pharyngeal epithelium | 7.77e-15 | 23 |
thymic region | 7.77e-15 | 23 |
pharyngeal gland | 7.77e-15 | 23 |
entire pharyngeal arch endoderm | 7.77e-15 | 23 |
thymus primordium | 7.77e-15 | 23 |
early pharyngeal endoderm | 7.77e-15 | 23 |
connective tissue | 1.97e-14 | 46 |
pharynx | 4.60e-14 | 24 |
gland of gut | 4.60e-14 | 24 |
upper respiratory tract | 4.60e-14 | 24 |
chordate pharynx | 4.60e-14 | 24 |
pharyngeal arch system | 4.60e-14 | 24 |
pharyngeal region of foregut | 4.60e-14 | 24 |
segment of respiratory tract | 9.45e-14 | 27 |
mixed endoderm/mesoderm-derived structure | 7.93e-13 | 35 |
gut epithelium | 8.29e-09 | 55 |
craniocervical region | 3.46e-08 | 36 |
lateral plate mesoderm | 4.08e-08 | 87 |
respiratory tract | 9.20e-08 | 41 |
endocrine gland | 1.11e-07 | 60 |
foregut | 1.69e-07 | 80 |
respiratory system | 1.72e-07 | 42 |
gland | 9.79e-07 | 65 |