FFCP PHASE1:Hg19::chr16:23724518..23724568,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10595 | |EntrezGene=10595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16942 | |HGNC=16942 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETG2 | |UniProt=E7ETG2 | ||
|association_with_transcript=0bp_to_ENST00000457008_5end | |association_with_transcript=0bp_to_ENST00000457008_5end | ||
|cluster_id=chr16:23724518..23724568,- | |||
|coexpression_cluster_id=C3544 | |coexpression_cluster_id=C3544 | ||
|description=CAGE_peak_1_at_ERN2_5end | |description=CAGE_peak_1_at_ERN2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!4.18e-10!5 | |ontology_enrichment_celltype=CL:0002322!4.18e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002178;9.47e-07;3 | |ontology_enrichment_celltype_v019=CL:0002178;9.47e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,9.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006595;3.48e-11;86 | |ontology_enrichment_development_v019=UBERON:0006595;3.48e-11;86 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.07e-09;2!DOID:299;9.20e-08;25 | |ontology_enrichment_disease_v019=DOID:3493;1.07e-09;2!DOID:299;9.20e-08;25 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.07e-09,2;DOID:299,9.16e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.17e-14!169;UBERON:0000925!5.17e-14!169;UBERON:0006595!5.17e-14!169;UBERON:0007023!1.02e-13!115;UBERON:0004921!3.62e-12!129;UBERON:0004185!3.62e-12!129;UBERON:0002294!5.28e-12!7;UBERON:0001173!5.28e-12!7;UBERON:0004912!5.28e-12!7;UBERON:0001007!5.38e-11!155;UBERON:0001555!5.38e-11!155;UBERON:0007026!5.38e-11!155;UBERON:0000077!1.78e-08!130;UBERON:0005409!1.83e-08!35;UBERON:0002110!1.13e-07!3;UBERON:0006242!1.13e-07!3;UBERON:0000059!1.88e-07!11 | |ontology_enrichment_uberon=UBERON:0004119!5.17e-14!169;UBERON:0000925!5.17e-14!169;UBERON:0006595!5.17e-14!169;UBERON:0007023!1.02e-13!115;UBERON:0004921!3.62e-12!129;UBERON:0004185!3.62e-12!129;UBERON:0002294!5.28e-12!7;UBERON:0001173!5.28e-12!7;UBERON:0004912!5.28e-12!7;UBERON:0001007!5.38e-11!155;UBERON:0001555!5.38e-11!155;UBERON:0007026!5.38e-11!155;UBERON:0000077!1.78e-08!130;UBERON:0005409!1.83e-08!35;UBERON:0002110!1.13e-07!3;UBERON:0006242!1.13e-07!3;UBERON:0000059!1.88e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.90e-25;33!UBERON:0005409;3.97e-25;22!UBERON:0000160;2.55e-18;17!UBERON:0002294;2.41e-15;7!UBERON:0001173;2.41e-15;7!UBERON:0002108;2.67e-14;4!UBERON:0002394;2.10e-10;4!UBERON:0003928;2.10e-10;4!UBERON:0003127;5.56e-10;2!UBERON:0000059;6.16e-10;11!UBERON:0001555;1.55e-09;54!UBERON:0000341;1.95e-09;2!UBERON:0006562;3.04e-09;2!UBERON:0000945;1.47e-08;5!UBERON:0010039;1.47e-08;5!UBERON:0001155;3.82e-08;9!UBERON:0001041;1.26e-07;14!UBERON:0001007;3.02e-07;81!UBERON:0002114;6.71e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004921;3.90e-25;33!UBERON:0005409;3.97e-25;22!UBERON:0000160;2.55e-18;17!UBERON:0002294;2.41e-15;7!UBERON:0001173;2.41e-15;7!UBERON:0002108;2.67e-14;4!UBERON:0002394;2.10e-10;4!UBERON:0003928;2.10e-10;4!UBERON:0003127;5.56e-10;2!UBERON:0000059;6.16e-10;11!UBERON:0001555;1.55e-09;54!UBERON:0000341;1.95e-09;2!UBERON:0006562;3.04e-09;2!UBERON:0000945;1.47e-08;5!UBERON:0010039;1.47e-08;5!UBERON:0001155;3.82e-08;9!UBERON:0001041;1.26e-07;14!UBERON:0001007;3.02e-07;81!UBERON:0002114;6.71e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.19e-22,25;UBERON:0004921,8.90e-20,118;UBERON:0000160,2.45e-18,17;UBERON:0001007,8.32e-18,145;UBERON:0001555,8.32e-18,145;UBERON:0007026,8.32e-18,145;UBERON:0004119,8.22e-17,160;UBERON:0000925,8.22e-17,160;UBERON:0006595,8.22e-17,160;UBERON:0002108,2.54e-14,4;UBERON:0002294,6.84e-12,9;UBERON:0001173,6.84e-12,9;UBERON:0004912,6.84e-12,9;UBERON:0007023,2.29e-11,114;UBERON:0003127,5.81e-10,2;UBERON:0000059,6.11e-10,11;UBERON:0000341,2.04e-09,2;UBERON:0011216,4.77e-09,223;UBERON:0001155,3.82e-08,9;UBERON:0001041,1.05e-07,87;UBERON:0002394,4.18e-07,6;UBERON:0003928,4.18e-07,6;UBERON:0002114,6.52e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.530119073285941,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.552485933615378,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,1.14851441245126,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.0078161730797,0,0,0,0,0,0,0,0,0,0,0,0,8.96615947129814,13.8141957765574,0,0,0,0,2.78591888556713,50.6629924331974,0,1.28236427328014,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61807559187591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.5735737970654,24.3258302384183,21.9970852176105,0,0,0,0.134802265961354,0,0,0,0,0,0,26.6179575307061,0,0.189559738885464,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.872901148395775,0,2.48578814858586,0.137041924646751,0,0,1.17330829640882,0.64127056201227,96.9076596116661,0,87.8951544640046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,0,0,0,0,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04815022316672,1.81538601365081,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,0,0.2506898940227,0,0,4.24046059875633,0,0,0,0,0,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9913911731111,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8206012252238,0,0,0,0,0,0,8.435590032618,0.351742488719241,1.14986184875636,0,0,0,1.13831095675649,0,0,0,0,0,0,0,2.19780659981439,0,0.560544326627578,10.9579046461139,0,0,0.0714765441766563,0,0,0,0,0,0,0,23.6625047351153,0,0,0,0,0,0,0,2.45375584038107,60.2274549412411,0,0,0,3.88568794447312,0,0,0,0,0,0,15.6663540959128,5.68254857310289,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,59.1572474479679,5.04602211744995,0,0,0,0,35.4447983145318,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,11.088167058851,2.3806443146374,0.0645889098360061,0,0,0,0,2.61260097476354,0,10.1028079521881,36.7217691610503,15.6350367576626,0,0,0,0,2.34640942403454,1.833621662743,0,6.65756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.530119073285941,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.552485933615378,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,1.14851441245126,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.753150406214233,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.0078161730797,0,0,0,0,0,0,0,0,0,0,0,0,8.96615947129814,13.8141957765574,0,0,0,0,2.78591888556713,50.6629924331974,0,1.28236427328014,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61807559187591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.5735737970654,24.3258302384183,21.9970852176105,0,0,0,0.134802265961354,0,0,0,0,0,0,26.6179575307061,0,0.189559738885464,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.872901148395775,0,2.48578814858586,0.137041924646751,0,0,1.17330829640882,0.64127056201227,96.9076596116661,0,87.8951544640046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.550157746388935,0,0,0,0,0,0.0788057072991982,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.04815022316672,1.81538601365081,0.314408610199332,1.24271716604159,0.496166021811951,0,0,0,0,0.2506898940227,0,0,4.24046059875633,0,0,0,0,0,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9913911731111,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8206012252238,0,0,0,0,0,0,8.435590032618,0.351742488719241,1.14986184875636,0,0,0,1.13831095675649,0,0,0,0,0,0,0,2.19780659981439,0,0.560544326627578,10.9579046461139,0,0,0.0714765441766563,0,0,0,0,0,0,0,23.6625047351153,0,0,0,0,0,0,0,2.45375584038107,60.2274549412411,0,0,0,3.88568794447312,0,0,0,0,0,0,15.6663540959128,5.68254857310289,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,59.1572474479679,5.04602211744995,0,0,0,0,35.4447983145318,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,11.088167058851,2.3806443146374,0.0645889098360061,0,0,0,0,2.61260097476354,0,10.1028079521881,36.7217691610503,15.6350367576626,0,0,0,0,2.34640942403454,1.833621662743,0,6.65756774185513,0,0 | ||
|short_description=p1@ERN2 | |short_description=p1@ERN2 | ||
}} | }} |
Latest revision as of 06:27, 25 September 2015
Short description: | p1@ERN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ERN2_5end |
Coexpression cluster: | C3544_colon_signet_gastric_gall_stomach_adenocarcinoma_bile |
Association with transcript: | 0bp_to_ENST00000457008_5end |
EntrezGene: | ERN2 |
HGNC: | 16942 |
UniProt: | E7ETG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 9.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.19e-22 | 25 |
subdivision of digestive tract | 8.90e-20 | 118 |
intestine | 2.45e-18 | 17 |
digestive system | 8.32e-18 | 145 |
digestive tract | 8.32e-18 | 145 |
primitive gut | 8.32e-18 | 145 |
endoderm-derived structure | 8.22e-17 | 160 |
endoderm | 8.22e-17 | 160 |
presumptive endoderm | 8.22e-17 | 160 |
small intestine | 2.54e-14 | 4 |
biliary system | 6.84e-12 | 9 |
biliary tree | 6.84e-12 | 9 |
biliary bud | 6.84e-12 | 9 |
adult organism | 2.29e-11 | 114 |
open tracheal system trachea | 5.81e-10 | 2 |
large intestine | 6.11e-10 | 11 |
throat | 2.04e-09 | 2 |
organ system subdivision | 4.77e-09 | 223 |
colon | 3.82e-08 | 9 |
foregut | 1.05e-07 | 87 |
bile duct | 4.18e-07 | 6 |
digestive system duct | 4.18e-07 | 6 |
duodenum | 6.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.07e-09 | 2 |
adenocarcinoma | 9.16e-08 | 25 |