FFCP PHASE1:Hg19::chr5:140201183..140201218,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56143 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8671 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000529619_5end | |||
|cluster_id=chr5:140201183..140201218,+ | |||
|coexpression_cluster_id=C653 | |||
|description=CAGE_peak_1_at_PCDHA5_5end | |||
|id=chr5:140201183..140201218,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.92e-15;82!UBERON:0006215;9.88e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.02e-61!57;UBERON:0005068!6.02e-61!57;UBERON:0006241!6.02e-61!57;UBERON:0007135!6.02e-61!57;UBERON:0002780!1.54e-51!41;UBERON:0001890!1.54e-51!41;UBERON:0006240!1.54e-51!41;UBERON:0001017!4.83e-51!82;UBERON:0000073!9.39e-51!94;UBERON:0001016!9.39e-51!94;UBERON:0002616!1.02e-50!59;UBERON:0003080!5.04e-50!42;UBERON:0005743!1.31e-49!86;UBERON:0000955!2.86e-47!69;UBERON:0006238!2.86e-47!69;UBERON:0003075!5.76e-42!86;UBERON:0007284!5.76e-42!86;UBERON:0001893!6.82e-42!34;UBERON:0002020!8.76e-42!34;UBERON:0003528!8.76e-42!34;UBERON:0002346!6.83e-41!90;UBERON:0007023!2.73e-40!115;UBERON:0002791!3.05e-40!33;UBERON:0001869!1.62e-39!32;UBERON:0002619!1.06e-37!22;UBERON:0001950!7.38e-35!20;UBERON:0000956!2.15e-32!25;UBERON:0000203!2.15e-32!25;UBERON:0003056!2.96e-32!61;UBERON:0004121!4.51e-27!169;UBERON:0000924!6.14e-27!173;UBERON:0006601!6.14e-27!173;UBERON:0000033!3.23e-25!123;UBERON:0000153!2.74e-23!129;UBERON:0007811!2.74e-23!129;UBERON:0000025!3.23e-15!194;UBERON:0001871!3.15e-14!7;UBERON:0003076!5.12e-12!15;UBERON:0003057!5.12e-12!15;UBERON:0004111!6.47e-12!241;UBERON:0000200!2.27e-11!6;UBERON:0002420!3.50e-11!9;UBERON:0007245!3.50e-11!9;UBERON:0010009!3.50e-11!9;UBERON:0010011!3.50e-11!9;UBERON:0000454!3.50e-11!9;UBERON:0001894!6.94e-11!7;UBERON:0006222!6.94e-11!7;UBERON:0002308!1.00e-10!9;UBERON:0000125!1.00e-10!9;UBERON:0002021!1.02e-09!5;UBERON:0000349!3.26e-09!5;UBERON:0001872!4.48e-09!5;UBERON:0000475!5.77e-09!365;UBERON:0000477!6.66e-09!286;UBERON:0004733!1.85e-08!12;UBERON:0002028!1.85e-08!12;UBERON:0007277!1.85e-08!12;UBERON:0000483!2.02e-08!309;UBERON:0000119!3.55e-08!312;UBERON:0009663!4.25e-08!7;UBERON:0004732!1.14e-07!13;UBERON:0003296!2.65e-07!4;UBERON:0010133!2.65e-07!4;UBERON:0002298!5.41e-07!8;UBERON:0002680!6.90e-07!9;UBERON:0001895!6.90e-07!9;UBERON:0010092!6.90e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.00e-66;22!UBERON:0001950;3.46e-61;20!UBERON:0001869;4.89e-61;32!UBERON:0000956;2.54e-58;25!UBERON:0000203;2.54e-58;25!UBERON:0002791;9.69e-57;32!UBERON:0003528;1.46e-54;34!UBERON:0002020;1.46e-54;34!UBERON:0001893;1.97e-53;34!UBERON:0002780;2.47e-49;41!UBERON:0001890;2.47e-49;41!UBERON:0000073;1.26e-42;53!UBERON:0002616;1.26e-42;53!UBERON:0000955;1.97e-33;68!UBERON:0001017;1.59e-30;75!UBERON:0001016;1.24e-24;83!UBERON:0001871;4.77e-23;6!UBERON:0000200;7.77e-21;6!UBERON:0002021;1.30e-17;5!UBERON:0000349;3.20e-16;5!UBERON:0003296;9.53e-13;4!UBERON:0010133;9.53e-13;4!UBERON:0004733;1.16e-12;12!UBERON:0002028;1.16e-12;12!UBERON:0002420;2.15e-12;9!UBERON:0007245;2.15e-12;9!UBERON:0010009;2.15e-12;9!UBERON:0010011;2.15e-12;9!UBERON:0000454;2.15e-12;9!UBERON:0011216;5.70e-12;132!UBERON:0004732;1.31e-11;13!UBERON:0001870;1.42e-11;3!UBERON:0001872;4.37e-11;5!UBERON:0007023;1.82e-10;114!UBERON:0002680;2.49e-09;9!UBERON:0001895;2.49e-09;9!UBERON:0000125;1.84e-08;9!UBERON:0002308;1.84e-08;9!UBERON:0002298;2.27e-08;6!UBERON:0002702;2.59e-08;2!UBERON:0001876;6.94e-08;2!UBERON:0002771;9.74e-08;2!UBERON:0000369;1.22e-07;4!UBERON:0002435;1.22e-07;4!UBERON:0000204;1.22e-07;4!UBERON:0000007;2.50e-07;2!UBERON:0001894;2.58e-07;7!UBERON:0009663;2.58e-07;7!UBERON:0001905;4.39e-07;2!UBERON:0001954;4.39e-07;2!UBERON:0002757;4.39e-07;2!UBERON:0010134;4.39e-07;2!UBERON:0003022;4.39e-07;2!UBERON:0005408;4.39e-07;2!UBERON:0002421;4.39e-07;2!UBERON:0001899;4.39e-07;2!UBERON:0002600;4.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.44e-80,53;UBERON:0002616,2.44e-80,53;UBERON:0001049,1.05e-79,56;UBERON:0005068,1.05e-79,56;UBERON:0006241,1.05e-79,56;UBERON:0007135,1.05e-79,56;UBERON:0000955,7.80e-71,68;UBERON:0006238,7.80e-71,68;UBERON:0002780,8.50e-69,41;UBERON:0001890,8.50e-69,41;UBERON:0003080,8.50e-69,41;UBERON:0006240,8.50e-69,41;UBERON:0001869,6.42e-68,32;UBERON:0001017,1.24e-67,81;UBERON:0002619,8.84e-67,22;UBERON:0001016,5.45e-66,89;UBERON:0001893,1.30e-63,34;UBERON:0003528,2.80e-63,34;UBERON:0002020,2.80e-63,34;UBERON:0002791,1.43e-62,32;UBERON:0001950,3.57e-61,20;UBERON:0000956,2.27e-58,25;UBERON:0000203,2.27e-58,25;UBERON:0003075,1.35e-51,82;UBERON:0007284,1.35e-51,82;UBERON:0002346,9.16e-49,86;UBERON:0003056,6.50e-44,61;UBERON:0010371,5.23e-41,104;UBERON:0007023,7.09e-33,114;UBERON:0004121,2.80e-31,171;UBERON:0000924,2.80e-31,171;UBERON:0006601,2.80e-31,171;UBERON:0010314,2.47e-30,132;UBERON:0011216,1.15e-29,223;UBERON:0001871,5.04e-23,6;UBERON:0000200,1.08e-20,6;UBERON:0000025,2.49e-20,192;UBERON:0002021,1.83e-17,5;UBERON:0000349,1.76e-16,5;UBERON:0004111,3.37e-15,240;UBERON:0003076,7.59e-13,15;UBERON:0003057,7.59e-13,15;UBERON:0004733,8.58e-13,12;UBERON:0002028,8.58e-13,12;UBERON:0007277,8.58e-13,12;UBERON:0003296,9.11e-13,4;UBERON:0010133,9.11e-13,4;UBERON:0002420,2.14e-12,9;UBERON:0007245,2.14e-12,9;UBERON:0010009,2.14e-12,9;UBERON:0010011,2.14e-12,9;UBERON:0000454,2.14e-12,9;UBERON:0004732,9.97e-12,13;UBERON:0001870,1.48e-11,3;UBERON:0001872,3.59e-11,5;UBERON:0000483,1.67e-10,306;UBERON:0000119,2.64e-10,309;UBERON:0002680,1.86e-09,9;UBERON:0001895,1.86e-09,9;UBERON:0010092,1.86e-09,9;UBERON:0002298,1.61e-08,6;UBERON:0000125,1.89e-08,9;UBERON:0002308,1.89e-08,9;UBERON:0002702,2.65e-08,2;UBERON:0001876,5.29e-08,2;UBERON:0002771,1.15e-07,2;UBERON:0000369,1.26e-07,4;UBERON:0002435,1.26e-07,4;UBERON:0000204,1.26e-07,4;UBERON:0010082,1.26e-07,4;UBERON:0000007,2.09e-07,2;UBERON:0001894,2.51e-07,7;UBERON:0006222,2.51e-07,7;UBERON:0009663,2.94e-07,7;UBERON:0001954,3.75e-07,2;UBERON:0003022,3.75e-07,2;UBERON:0002421,3.75e-07,2;UBERON:0002600,3.75e-07,2;UBERON:0001905,4.99e-07,2;UBERON:0002757,4.99e-07,2;UBERON:0010134,4.99e-07,2;UBERON:0005408,4.99e-07,2;UBERON:0001899,4.99e-07,2 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,1.34013012267479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,4.97073823883149,2.95405774462077,0.333926115068718,0,0,0,0,0,0,0,0,0,3.40140231883657,0,0,0,0,1.93866549219044,3.9890282209596,5.98841394003583,0.260427761085233,2.27395999990109,0,0,0.762760950878299,0,0,0,0,0,1.08536794762867,4.5774520895125,10.7261882133288,5.31985714116385,2.85201016300164,0,0,0.153900517007594,0,0,0.807818799687949,1.19512109114209,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0.702793337176017,0,0,0,0,2.41981432097328,2.14250933141343,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,1.35588444468319,0,0,4.49506651286739,0,0,0.213452994739353,0.39961921916426,0,3.32156128881155,0,0,2.60930324687408,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0,0.717873024576814,0.599037001496973,0,0,0,0,0,0,0,0,0.984274815147488,0,1.59045937961861,1.49823746722733,0,0.550157746388935,0,0,0,4.98146364595802,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,1.68067843270016,0.79339561045614,1.88195521672762,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,2.44052529803926,4.63206443614049,0,1.55300672151593,1.36612086471044,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,3.08801447160972,0.657852148736121,0,0,0,0,0,0,3.04168559533808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10086159299127,0,0,0,0.123935764259002,2.23457967189298,0,0,12.8091319725675,0,0,2.95454435443714,5.6678630530234,3.19267718114303,3.07674546361133,4.03314713954749,3.31954811828246,4.03689114079628,0,0,0.471878893390961,0,0,0,0,0,0.0752103283492573,0,0,1.57144016688853,0,0,4.38994300019565,1.56215619722769,3.9270491335225,3.99519604221613,0.546974809018219,0,0,0,0,1.07140367175657,1.68141861109412,1.82089681270989,2.27662191351298,0,0,0,1.97112225632812,4.40677582871089,0.827356886187777,1.33477682270483,0.39246546425257,1.57115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.473328002922261,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,5.96852325484105,0,0,0,0,0,0,2.82190377816914,0,0,0.785233868459781,0.891139200981258,1.2679671827502,0,0,0,0,0.71421575442263,0,0,0,0,0.430018749454354,0,4.96337878393677,2.61810414204226,0.5290268405154,0,0,0,0,0,0.506794004045748,0,0.26721740526556,1.19463369395298,0,0,0.267964130156178,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@PCDHA5 | |||
}} |
Latest revision as of 02:58, 25 September 2015
Short description: | p1@PCDHA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDHA5_5end |
Coexpression cluster: | C653_cerebellum_pituitary_pineal_nonsmall_somatostatinoma_occipital_small |
Association with transcript: | -3bp_to_ENST00000529619_5end |
EntrezGene: | PCDHA5 |
HGNC: | 8671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data