FFCP PHASE1:Hg19::chr2:224467093..224467104,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10575 | |||
|TSSclassifier=strong | |||
|UniProt=C9JDT0 | |||
|association_with_transcript=-14bp_to_ENST00000433889_5end | |||
|cluster_id=chr2:224467093..224467104,- | |||
|description=CAGE_peak_2_at_SCG2_5end | |||
|id=chr2:224467093..224467104,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-14;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;9.73e-10;10!DOID:169;4.91e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.87e-10,10;DOID:169,4.89e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.16e-46!82;UBERON:0000073!3.50e-45!94;UBERON:0001016!3.50e-45!94;UBERON:0005743!1.20e-43!86;UBERON:0000955!1.98e-40!69;UBERON:0006238!1.98e-40!69;UBERON:0002616!4.37e-38!59;UBERON:0001049!2.01e-37!57;UBERON:0005068!2.01e-37!57;UBERON:0006241!2.01e-37!57;UBERON:0007135!2.01e-37!57;UBERON:0002346!3.04e-33!90;UBERON:0003075!1.52e-31!86;UBERON:0007284!1.52e-31!86;UBERON:0003080!1.07e-30!42;UBERON:0002780!2.27e-30!41;UBERON:0001890!2.27e-30!41;UBERON:0006240!2.27e-30!41;UBERON:0000924!3.32e-26!173;UBERON:0006601!3.32e-26!173;UBERON:0003056!1.05e-25!61;UBERON:0000033!2.78e-25!123;UBERON:0002020!1.03e-24!34;UBERON:0003528!1.03e-24!34;UBERON:0004121!1.13e-24!169;UBERON:0001893!1.27e-24!34;UBERON:0002791!9.20e-24!33;UBERON:0001869!1.76e-23!32;UBERON:0000153!2.82e-23!129;UBERON:0007811!2.82e-23!129;UBERON:0007023!1.87e-22!115;UBERON:0002619!1.34e-18!22;UBERON:0000956!8.00e-18!25;UBERON:0000203!8.00e-18!25;UBERON:0001950!4.10e-17!20;UBERON:0000475!8.05e-11!365;UBERON:0000025!9.09e-10!194;UBERON:0000481!2.06e-08!347;UBERON:0002308!2.28e-08!9;UBERON:0000125!2.28e-08!9;UBERON:0002420!2.68e-08!9;UBERON:0007245!2.68e-08!9;UBERON:0010009!2.68e-08!9;UBERON:0010011!2.68e-08!9;UBERON:0000454!2.68e-08!9;UBERON:0003076!5.15e-08!15;UBERON:0003057!5.15e-08!15;UBERON:0000468!6.49e-08!659;UBERON:0000477!1.12e-07!286;UBERON:0000922!1.92e-07!612;UBERON:0001871!2.88e-07!7;UBERON:0002050!2.90e-07!605;UBERON:0005423!2.90e-07!605;UBERON:0001894!3.60e-07!7;UBERON:0006222!3.60e-07!7;UBERON:0000119!4.54e-07!312;UBERON:0000923!4.97e-07!604;UBERON:0005291!4.97e-07!604;UBERON:0006598!4.97e-07!604;UBERON:0002532!4.97e-07!604;UBERON:0000483!5.58e-07!309;UBERON:0004111!6.05e-07!241;UBERON:0002298!6.31e-07!8;UBERON:0009663!8.69e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.04e-32;41!UBERON:0001890;2.04e-32;41!UBERON:0003528;1.20e-30;34!UBERON:0002020;1.20e-30;34!UBERON:0001869;1.37e-30;32!UBERON:0001893;1.91e-30;34!UBERON:0002791;3.95e-30;32!UBERON:0000073;2.26e-29;53!UBERON:0002616;2.26e-29;53!UBERON:0002619;3.02e-29;22!UBERON:0001950;7.51e-27;20!UBERON:0000956;6.17e-25;25!UBERON:0000203;6.17e-25;25!UBERON:0001017;1.58e-24;75!UBERON:0000955;2.09e-23;68!UBERON:0001016;5.64e-21;83!UBERON:0000125;1.41e-12;9!UBERON:0002308;1.41e-12;9!UBERON:0002420;1.94e-12;9!UBERON:0007245;1.94e-12;9!UBERON:0010009;1.94e-12;9!UBERON:0010011;1.94e-12;9!UBERON:0000454;1.94e-12;9!UBERON:0011216;7.15e-12;132!UBERON:0001894;1.15e-10;7!UBERON:0009663;5.21e-10;7!UBERON:0001871;1.09e-09;6!UBERON:0000200;3.25e-09;6!UBERON:0002298;4.05e-09;6!UBERON:0004733;1.47e-08;12!UBERON:0002028;1.47e-08;12!UBERON:0007023;3.18e-08;114!UBERON:0000349;6.93e-08;5!UBERON:0004732;9.86e-08;13!UBERON:0001872;1.09e-07;5!UBERON:0000369;1.89e-07;4!UBERON:0002435;1.89e-07;4!UBERON:0000204;1.89e-07;4!UBERON:0002021;2.26e-07;5!UBERON:0003296;5.03e-07;4!UBERON:0010133;5.03e-07;4!UBERON:0011135;6.49e-07;5!UBERON:0002216;6.49e-07;5!UBERON:0011134;6.49e-07;5!UBERON:0002209;6.49e-07;5!UBERON:0002213;6.49e-07;5!UBERON:0007844;6.49e-07;5!UBERON:0011138;6.49e-07;5!UBERON:0001130;6.49e-07;5!UBERON:0001066;6.49e-07;5!UBERON:0001468;6.49e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.78e-63,89;UBERON:0001017,1.50e-62,81;UBERON:0001049,9.12e-56,56;UBERON:0005068,9.12e-56,56;UBERON:0006241,9.12e-56,56;UBERON:0007135,9.12e-56,56;UBERON:0000955,1.28e-52,68;UBERON:0006238,1.28e-52,68;UBERON:0000073,3.41e-52,53;UBERON:0002616,3.41e-52,53;UBERON:0002780,3.63e-45,41;UBERON:0001890,3.63e-45,41;UBERON:0003080,3.63e-45,41;UBERON:0006240,3.63e-45,41;UBERON:0002346,2.15e-44,86;UBERON:0003075,2.10e-41,82;UBERON:0007284,2.10e-41,82;UBERON:0003528,5.02e-36,34;UBERON:0002020,5.02e-36,34;UBERON:0001893,6.99e-36,34;UBERON:0003056,3.64e-35,61;UBERON:0001869,5.14e-34,32;UBERON:0002791,2.01e-33,32;UBERON:0004121,2.45e-33,171;UBERON:0000924,2.45e-33,171;UBERON:0006601,2.45e-33,171;UBERON:0010371,5.95e-30,104;UBERON:0002619,3.13e-29,22;UBERON:0011216,3.53e-28,223;UBERON:0001950,8.17e-27,20;UBERON:0007023,1.67e-25,114;UBERON:0000956,6.37e-25,25;UBERON:0000203,6.37e-25,25;UBERON:0010314,1.22e-23,132;UBERON:0000125,1.32e-12,9;UBERON:0002308,1.32e-12,9;UBERON:0002420,1.72e-12,9;UBERON:0007245,1.72e-12,9;UBERON:0010009,1.72e-12,9;UBERON:0010011,1.72e-12,9;UBERON:0000454,1.72e-12,9;UBERON:0003076,1.15e-11,15;UBERON:0003057,1.15e-11,15;UBERON:0001894,1.14e-10,7;UBERON:0006222,1.14e-10,7;UBERON:0000025,1.39e-10,192;UBERON:0009663,4.74e-10,7;UBERON:0001871,1.13e-09,6;UBERON:0000200,3.25e-09,6;UBERON:0002298,4.33e-09,6;UBERON:0004733,1.57e-08,12;UBERON:0002028,1.57e-08,12;UBERON:0007277,1.57e-08,12;UBERON:0002050,4.79e-08,564;UBERON:0000923,6.02e-08,560;UBERON:0010316,6.02e-08,560;UBERON:0005291,6.02e-08,560;UBERON:0006598,6.02e-08,560;UBERON:0010317,6.02e-08,560;UBERON:0002532,6.02e-08,560;UBERON:0000349,6.42e-08,5;UBERON:0004732,1.05e-07,13;UBERON:0001872,1.06e-07,5;UBERON:0000369,1.89e-07,4;UBERON:0002435,1.89e-07,4;UBERON:0000204,1.89e-07,4;UBERON:0010082,1.89e-07,4;UBERON:0002021,2.44e-07,5;UBERON:0003296,5.01e-07,4;UBERON:0010133,5.01e-07,4;UBERON:0011135,6.04e-07,5;UBERON:0002216,6.04e-07,5;UBERON:0011134,6.04e-07,5;UBERON:0002209,6.04e-07,5;UBERON:0002213,6.04e-07,5;UBERON:0005856,6.04e-07,5;UBERON:0005866,6.04e-07,5;UBERON:0005863,6.04e-07,5;UBERON:0007844,6.04e-07,5;UBERON:0011138,6.04e-07,5;UBERON:0001130,6.04e-07,5;UBERON:0001066,6.04e-07,5;UBERON:0001468,6.04e-07,5;UBERON:0005423,6.15e-07,581 | |||
|phase1_expression=3.63356758541113,2.5692062866918,1.12763523276777,2.00146596706261,2.23480547213644,1.74467704820074,0,0,0,0,0,0,0,10.643906354564,2.31978163009541,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.958120975510189,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.724232594804119,0,0,1.41802225746102,0.221729397462564,0.087834785693126,3.47094550068939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,1.32409180813219,1.14734648299525,0,1.68203280042692,0,0.98667019366864,1.24484414159907,0.134710672069688,0.163461903113459,0.302714855289863,2.30470369792,2.10889288650417,0,0,0,0,0,0,1.42907919878425,0,0.723280468230358,0,0,0,0,0.336672227908132,0,0,0,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0.116193942869518,0.621966330092223,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,1.54411029268673,0,0,0,0,0.325808305310325,0,0,3.36198174427723,1.05667824812239,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.4512968087854,8.2148373447668,0.75745460055828,0.317489471460845,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,13.5735301545667,0,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,1.58390374586686,8.741741934728,6.10073421020206,0.399891964728228,0,0,0,1.91699884393266,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,51.5812087171601,93.7006947774876,31.7048413238855,20.4369843707906,33.1728150859645,0,0,0,9.81531933753119,7.50255781589516,9.49427582949075,0,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,0.587403472388222,0,0,0,0,0,0,0.604780586659361,0.744323423456331,2.455391572609,0.841980283299221,1.66580894032411,2.04682899626681,2.0911009748669,0,0,0,0.164254312027618,0,0,0,0,0,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0.784306353074702,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.290033387828457,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,6.69885064847401,20.8810420314359,3.0500831027812,0,0,0,0,0.359744915166629,0.823611089208164,0.824686816419805,0,0,0,0,0.731140468893853,1.05650146756755,0.136499911407986,0,0,0.551365343546124,0,0,0,4.59126326432643,0.202910376962704,0,0,0.430234056612155,0.0982490410131212,0,0,0,0,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,1.94176834799221,0,0,0,0.296964680832639,0,17.8946576597934,12.8009168933567,0.333926115068718,0,0,1.19548792950642,1.38141957765574,9.32151167060821,0.20453736500431,0,0.311039587661807,0,0.179021174675609,0,0.493217028184668,0,0,13.5706584453331,22.3571116570062,15.9691038400955,0,0,0.724999575434793,0,0,0,5.51589397186343,11.6641845353302,0.868124974666461,25.6865001886013,89.6031538986781,9.15490417902499,5.19722521676756,4.72876190325676,17.1120609780099,0.32681539055697,0,0.538651809526579,35.7778055359584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36138745112689,1.22206028986725,0,0,0,6.470508766145,0,25.7690890297873,0,0.586993856796269,2.67058417487502,0,7.25944296291983,3.0607276163049,6.76096402024821,0,0,0,0.330991955875499,0.627865836814451,0,0,11.5099978600905,0,0,0,0,0,0,0,0,0.387956065953678,0.176512253383001,3.16373037092745,1.09633539717401,0,39.2526934926448,0,0.881747022766871,0,0,0,0,107.41846866159,0,0,0,0.407712618220842,0.313808538937,0.917983958726896,25.4276519113337,9.00630433064684,2.46429682005587,0,0.859530882839914,0,0.558564802544508,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,16.6998234859954,9.94284864614502,0,0,0,0,0,36.996480004737,0,0,0.0524545881349981,0,0.179287339332845,0,0.714695326373367,0,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0,0.340776043570843,3.9659232032044,0,0,14.091842243409,25.2564269328538,0,0.704815022316672,0,0.314408610199332,0,0,0,0,0,0,0,0,0,1.41348686625211,23.0377726791416,19.4021761194121,10.766420040759,7.45431954397093,9.09618222602189,21.050680597129,0,0.249960815924213,0.303298235083296,0.285465333544967,0.705797459094515,0,2.8984205722165,0.298509605773748,0.233713309847224,0,0.568209015825267,1.0062716070103,1.77962244319307,0.686520205190771,0.302461847526478,0.621748802331122,0,0.159296767163702,0,0,2.07353103920428,4.51930914748591,0.521745061811734,5.7097891418943,1.14241563650639,1.22061219961398,0.545545977607678,0.429642228169954,0,0,0,0,0,1.26184898228651,0,0,0,0,0.231522474323834,0.244736704506468,0,0.617602894321944,0,0,0,0,0,0,0,9.26331522216596,0,0,0,2.29326894192489,0.245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| |||
|short_description=p2@SCG2 | |||
}} |
Latest revision as of 00:15, 25 September 2015
Short description: | p2@SCG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000433889_5end |
EntrezGene: | SCG2 |
HGNC: | 10575 |
UniProt: | C9JDT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.87e-10 | 10 |
neuroendocrine tumor | 4.89e-07 | 6 |