FFCP PHASE1:Hg19::chr19:8117636..8117653,+: Difference between revisions
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|id=chr19:8117636..8117653,+
|short_description=p1@CCL25
|description=CAGE_peak_1_at_CCL25_5end
|association_with_transcript=0bp_to_ENST00000253451,ENST00000315626,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6370 | |EntrezGene=6370 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10624 | |HGNC=10624 | ||
|TSSclassifier=strong | |||
|UniProt=A6NI52,C9JDZ7,O15444 | |UniProt=A6NI52,C9JDZ7,O15444 | ||
|association_with_transcript=0bp_to_ENST00000253451,ENST00000315626,NM_001201359,NM_005624,uc002mjc.3_5end | |||
|cluster_id=chr19:8117636..8117653,+ | |||
|coexpression_cluster_id=C2507 | |||
|description=CAGE_peak_1_at_CCL25_5end | |||
|id=chr19:8117636..8117653,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.44e-21!5;CL:0000039!1.13e-14!7;CL:0000586!1.13e-14!7;CL:0000540!8.59e-07!6;CL:0000031!8.59e-07!6;CL:0000404!8.59e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.18e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!4.35e-09!2;UBERON:0005409!1.98e-08!35;UBERON:0000160!7.16e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.38e-21;2!UBERON:0005058;1.38e-21;2!UBERON:0009113;1.38e-21;2!UBERON:0005409;8.95e-21;22!UBERON:0000922;6.69e-20;49!UBERON:0000160;8.52e-20;17!UBERON:0002108;4.14e-19;4!UBERON:0004177;6.95e-19;5!UBERON:0005057;6.95e-19;5!UBERON:0004921;5.58e-13;33!UBERON:0007029;5.16e-11;1!UBERON:0000059;1.04e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.94e-24,25;UBERON:0000160,8.24e-20,17;UBERON:0002108,4.14e-19,4;UBERON:0004177,1.13e-13,7;UBERON:0005057,1.13e-13,7;UBERON:0002370,2.82e-11,4;UBERON:0005058,2.82e-11,4;UBERON:0009113,2.82e-11,4;UBERON:0003295,2.82e-11,4;UBERON:0005562,2.82e-11,4;UBERON:0007029,4.91e-11,1;UBERON:0000974,8.74e-10,10;UBERON:0000059,1.02e-08,11;UBERON:0003351,8.37e-08,6;UBERON:0004921,4.78e-07,118 | |||
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| ||
|short_description=p1@CCL25 | |||
}} | }} |
Latest revision as of 23:12, 24 September 2015
Short description: | p1@CCL25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCL25_5end |
Coexpression cluster: | C2507_thymus_small_colon_duodenum_temporal_vein_throat |
Association with transcript: | 0bp_to_ENST00000253451, ENST00000315626, NM_001201359, NM_005624, uc002mjc.3_5end |
EntrezGene: | CCL25 |
HGNC: | 10624 |
UniProt: | A6NI52C9JDZ7O15444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.94e-24 | 25 |
intestine | 8.24e-20 | 17 |
small intestine | 4.14e-19 | 4 |
hemopoietic organ | 1.13e-13 | 7 |
immune organ | 1.13e-13 | 7 |
thymus | 2.82e-11 | 4 |
hemolymphoid system gland | 2.82e-11 | 4 |
thymic region | 2.82e-11 | 4 |
pharyngeal gland | 2.82e-11 | 4 |
thymus primordium | 2.82e-11 | 4 |
surface | 4.91e-11 | 1 |
neck | 8.74e-10 | 10 |
large intestine | 1.02e-08 | 11 |
pharyngeal epithelium | 8.37e-08 | 6 |
subdivision of digestive tract | 4.78e-07 | 118 |