FFCP PHASE1:Hg19::chr1:208063620..208063634,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=947 | |EntrezGene=947 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1662 | |HGNC=1662 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JTA5 | |UniProt=Q5JTA5 | ||
|association_with_transcript=202bp_to_ENST00000367036,uc001hgv.1_5end | |association_with_transcript=202bp_to_ENST00000367036,uc001hgv.1_5end | ||
|cluster_id=chr1:208063620..208063634,- | |||
|coexpression_cluster_id=C428 | |coexpression_cluster_id=C428 | ||
|description=CAGE_peak_4_at_CD34_5end | |description=CAGE_peak_4_at_CD34_5end | ||
|id=chr1:208063620..208063634,- | |id=chr1:208063620..208063634,- | ||
|ontology_enrichment_celltype=CL:0002139!1.01e-29!24;CL:0000115!8.30e-28!35;CL:0000071!7.04e-22!18;CL:0002546!7.04e-22!18;CL:0002078!1.37e-21!44;CL:0000213!2.73e-21!57;CL:0000215!2.73e-21!57;CL:1000413!2.24e-13!9;CL:0000222!4.76e-11!119;CL:0002544!1.82e-09!6;CL:0005020!2.06e-09!6;CL:0002138!2.06e-09!6;CL:0005022!2.06e-09!6;CL:0000076!6.73e-07!62 | |ontology_enrichment_celltype=CL:0002139!1.01e-29!24;CL:0000115!8.30e-28!35;CL:0000071!7.04e-22!18;CL:0002546!7.04e-22!18;CL:0002078!1.37e-21!44;CL:0000213!2.73e-21!57;CL:0000215!2.73e-21!57;CL:1000413!2.24e-13!9;CL:0000222!4.76e-11!119;CL:0002544!1.82e-09!6;CL:0005020!2.06e-09!6;CL:0002138!2.06e-09!6;CL:0005022!2.06e-09!6;CL:0000076!6.73e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.81e-87;24!CL:0000115;4.72e-77;36!CL:0000071;1.10e-63;18!CL:0002078;1.10e-47;45!CL:1000413;6.81e-37;9!CL:0000213;5.39e-35;58!CL:0000215;5.39e-35;58!CL:0002544;3.75e-25;6!CL:0002138;5.21e-25;6!CL:0002543;6.00e-17;6!CL:0002144;1.36e-13;3!CL:0002188;3.40e-13;5!CL:0002618;5.29e-13;3!CL:0000076;8.01e-11;63!CL:1000746;1.92e-09;7!CL:1000612;1.92e-09;7!CL:0002545;2.01e-09;2!CL:0002262;5.81e-09;2!CL:1000398;5.81e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.11e-90,36;CL:0002139,1.85e-87,24;CL:0002078,3.98e-76,45;CL:0000071,1.13e-63,18;CL:0002546,1.13e-63,18;CL:0000213,2.21e-57,58;CL:0000215,2.21e-57,58;CL:1000413,6.54e-37,9;CL:0000222,1.95e-25,121;CL:0002544,3.60e-25,6;CL:0005020,5.22e-25,6;CL:0002138,5.22e-25,6;CL:0005022,5.22e-25,6;CL:0000076,4.36e-17,63;CL:0002543,6.31e-17,6;CL:0002144,1.37e-13,3;CL:0002188,3.35e-13,5;CL:0002618,5.51e-13,3;CL:1000746,1.90e-09,7;CL:1000612,1.90e-09,7;CL:0002545,1.97e-09,2;CL:0002262,5.93e-09,2;CL:1000398,5.93e-09,2;CL:0002321,2.16e-08,250;CL:0000066,1.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;1.10e-63;18!CL:0005022;5.21e-25;6!CL:0000222;1.50e-11;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.22e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001986!7.04e-22!18;UBERON:0004638!7.04e-22!18;UBERON:0004852!7.04e-22!18;UBERON:0000487!1.04e-16!22;UBERON:0000055!9.98e-15!69;UBERON:0007023!1.99e-14!115;UBERON:0004111!3.38e-14!241;UBERON:0000025!4.39e-14!194;UBERON:0006914!5.97e-14!25;UBERON:0000477!1.29e-13!286;UBERON:0003915!2.24e-13!9;UBERON:0004700!2.24e-13!9;UBERON:0001917!2.24e-13!9;UBERON:0004872!3.87e-13!84;UBERON:0002049!3.92e-12!79;UBERON:0007798!3.92e-12!79;UBERON:0001009!9.36e-12!113;UBERON:0004535!5.81e-11!110;UBERON:0001981!5.90e-11!60;UBERON:0007500!5.90e-11!60;UBERON:0004537!5.90e-11!60;UBERON:0006965!5.90e-11!60;UBERON:0000119!8.28e-09!312;UBERON:0001049!9.08e-09!57;UBERON:0005068!9.08e-09!57;UBERON:0006241!9.08e-09!57;UBERON:0007135!9.08e-09!57;UBERON:0000483!9.98e-09!309;UBERON:0003914!8.27e-08!118;UBERON:0002616!2.26e-07!59;UBERON:0000955!2.78e-07!69;UBERON:0006238!2.78e-07!69;UBERON:0003075!5.85e-07!86;UBERON:0007284!5.85e-07!86 | |ontology_enrichment_uberon=UBERON:0001986!7.04e-22!18;UBERON:0004638!7.04e-22!18;UBERON:0004852!7.04e-22!18;UBERON:0000487!1.04e-16!22;UBERON:0000055!9.98e-15!69;UBERON:0007023!1.99e-14!115;UBERON:0004111!3.38e-14!241;UBERON:0000025!4.39e-14!194;UBERON:0006914!5.97e-14!25;UBERON:0000477!1.29e-13!286;UBERON:0003915!2.24e-13!9;UBERON:0004700!2.24e-13!9;UBERON:0001917!2.24e-13!9;UBERON:0004872!3.87e-13!84;UBERON:0002049!3.92e-12!79;UBERON:0007798!3.92e-12!79;UBERON:0001009!9.36e-12!113;UBERON:0004535!5.81e-11!110;UBERON:0001981!5.90e-11!60;UBERON:0007500!5.90e-11!60;UBERON:0004537!5.90e-11!60;UBERON:0006965!5.90e-11!60;UBERON:0000119!8.28e-09!312;UBERON:0001049!9.08e-09!57;UBERON:0005068!9.08e-09!57;UBERON:0006241!9.08e-09!57;UBERON:0007135!9.08e-09!57;UBERON:0000483!9.98e-09!309;UBERON:0003914!8.27e-08!118;UBERON:0002616!2.26e-07!59;UBERON:0000955!2.78e-07!69;UBERON:0006238!2.78e-07!69;UBERON:0003075!5.85e-07!86;UBERON:0007284!5.85e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.10e-63;18!UBERON:0001986;1.10e-63;18!UBERON:0004852;1.10e-63;18!UBERON:0000487;2.56e-51;22!UBERON:0006914;1.22e-44;25!UBERON:0003915;6.81e-37;9!UBERON:0004700;6.81e-37;9!UBERON:0001917;6.81e-37;9!UBERON:0000490;8.31e-30;33!UBERON:0000055;5.15e-20;65!UBERON:0001473;1.36e-18;8!UBERON:0004536;1.36e-18;8!UBERON:0006558;1.36e-18;8!UBERON:0007500;9.20e-15;56!UBERON:0001981;9.20e-15;56!UBERON:0004537;9.20e-15;56!UBERON:0002465;9.76e-15;10!UBERON:0010523;1.36e-13;3!UBERON:0001915;1.36e-13;3!UBERON:0001982;1.36e-13;3!UBERON:0002049;1.86e-12;75!UBERON:0007798;1.86e-12;75!UBERON:0003914;1.23e-11;74!UBERON:0001638;3.36e-11;9!UBERON:0003920;3.36e-11;9!UBERON:0004582;3.36e-11;9!UBERON:0002405;1.56e-10;27!UBERON:0000074;1.92e-09;7!UBERON:0001229;1.92e-09;7!UBERON:0005800;2.01e-09;2!UBERON:0001515;2.01e-09;2!UBERON:0000353;4.27e-09;15!UBERON:0001281;5.81e-09;2!UBERON:0003497;5.81e-09;2!UBERON:0003909;5.81e-09;2!UBERON:0003835;5.81e-09;2!UBERON:0002066;5.71e-08;5!UBERON:0000025;5.80e-08;93!UBERON:0001009;1.82e-07;112!UBERON:0004111;4.11e-07;130!UBERON:0004535;4.32e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.13e-63,18;UBERON:0001986,1.13e-63,18;UBERON:0004852,1.13e-63,18;UBERON:0000487,2.61e-51,22;UBERON:0006914,1.24e-44,25;UBERON:0003915,6.54e-37,9;UBERON:0004700,6.54e-37,9;UBERON:0001917,6.54e-37,9;UBERON:0000055,2.52e-32,68;UBERON:0002049,2.31e-27,78;UBERON:0007798,2.31e-27,78;UBERON:0004535,3.91e-21,109;UBERON:0007500,7.05e-21,59;UBERON:0001981,7.05e-21,59;UBERON:0004537,7.05e-21,59;UBERON:0006965,7.05e-21,59;UBERON:0004872,2.14e-20,83;UBERON:0001009,2.18e-20,112;UBERON:0001473,1.36e-18,8;UBERON:0004536,1.36e-18,8;UBERON:0006558,1.36e-18,8;UBERON:0003914,8.12e-16,117;UBERON:0002465,9.77e-15,10;UBERON:0010523,1.37e-13,3;UBERON:0001915,1.37e-13,3;UBERON:0001982,1.37e-13,3;UBERON:0004111,1.11e-11,240;UBERON:0003887,3.02e-11,12;UBERON:0001638,3.47e-11,9;UBERON:0003920,3.47e-11,9;UBERON:0004582,3.47e-11,9;UBERON:0000025,8.88e-10,192;UBERON:0010532,1.90e-09,7;UBERON:0000074,1.90e-09,7;UBERON:0001229,1.90e-09,7;UBERON:0001230,1.90e-09,7;UBERON:0003220,1.90e-09,7;UBERON:0005749,1.90e-09,7;UBERON:0004199,1.90e-09,7;UBERON:0004209,1.90e-09,7;UBERON:0004198,1.90e-09,7;UBERON:0005800,1.97e-09,2;UBERON:0001515,1.97e-09,2;UBERON:0000353,4.27e-09,15;UBERON:0001281,5.93e-09,2;UBERON:0003497,5.93e-09,2;UBERON:0003909,5.93e-09,2;UBERON:0003835,5.93e-09,2;UBERON:0003081,6.79e-09,203;UBERON:0005103,2.85e-08,8;UBERON:0000083,2.85e-08,8;UBERON:0009201,2.85e-08,8;UBERON:0006553,2.85e-08,8;UBERON:0003074,2.85e-08,8;UBERON:0003060,2.85e-08,8;UBERON:0000490,3.95e-08,148;UBERON:0002066,5.85e-08,5;UBERON:0000080,2.36e-07,9;UBERON:0002120,2.36e-07,9;UBERON:0004875,2.36e-07,9;UBERON:0005721,2.36e-07,9;UBERON:0005754,2.36e-07,9;UBERON:0007297,2.36e-07,9;UBERON:0000058,4.82e-07,19 | |||
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| ||
|short_description=p4@CD34 | |short_description=p4@CD34 | ||
}} | }} |
Latest revision as of 17:09, 24 September 2015
Short description: | p4@CD34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CD34_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | 202bp_to_ENST00000367036, uc001hgv.1_5end |
EntrezGene: | CD34 |
HGNC: | 1662 |
UniProt: | Q5JTA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.11e-90 | 36 |
endothelial cell of vascular tree | 1.85e-87 | 24 |
meso-epithelial cell | 3.98e-76 | 45 |
blood vessel endothelial cell | 1.13e-63 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.13e-63 | 18 |
lining cell | 2.21e-57 | 58 |
barrier cell | 2.21e-57 | 58 |
endothelial cell of artery | 6.54e-37 | 9 |
mesodermal cell | 1.95e-25 | 121 |
aortic endothelial cell | 3.60e-25 | 6 |
lymphangioblast | 5.22e-25 | 6 |
endothelial cell of lymphatic vessel | 5.22e-25 | 6 |
vascular lymphangioblast | 5.22e-25 | 6 |
squamous epithelial cell | 4.36e-17 | 63 |
vein endothelial cell | 6.31e-17 | 6 |
capillary endothelial cell | 1.37e-13 | 3 |
glomerular endothelial cell | 3.35e-13 | 5 |
endothelial cell of umbilical vein | 5.51e-13 | 3 |
glomerular cell | 1.90e-09 | 7 |
kidney corpuscule cell | 1.90e-09 | 7 |
thoracic aorta endothelial cell | 1.97e-09 | 2 |
endothelial cell of sinusoid | 5.93e-09 | 2 |
endothelial cell of hepatic sinusoid | 5.93e-09 | 2 |
embryonic cell | 2.16e-08 | 250 |
epithelial cell | 1.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.22e-07 | 31 |