FFCP PHASE1:Hg19::chr18:74692301..74692348,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6925 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-349bp_to_BC130034_5end | |||
|cluster_id=chr18:74692301..74692348,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_MBP_5end | |||
|id=chr18:74692301..74692348,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.74e-26;82!UBERON:0006241;4.74e-13;3!UBERON:0003057;4.74e-13;3!UBERON:0006215;3.98e-11;3!UBERON:0010122;4.30e-08;2!UBERON:0002532;8.95e-07;206!UBERON:0010316;8.95e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;7.84e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.13e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.04e-74!57;UBERON:0005068!6.04e-74!57;UBERON:0006241!6.04e-74!57;UBERON:0007135!6.04e-74!57;UBERON:0001017!2.88e-60!82;UBERON:0002616!4.38e-60!59;UBERON:0005743!2.20e-59!86;UBERON:0000955!1.21e-57!69;UBERON:0006238!1.21e-57!69;UBERON:0007023!1.04e-56!115;UBERON:0000073!2.89e-55!94;UBERON:0001016!2.89e-55!94;UBERON:0003075!1.66e-54!86;UBERON:0007284!1.66e-54!86;UBERON:0002346!7.38e-54!90;UBERON:0002780!3.24e-52!41;UBERON:0001890!3.24e-52!41;UBERON:0006240!3.24e-52!41;UBERON:0002020!1.47e-51!34;UBERON:0003528!1.47e-51!34;UBERON:0001893!2.32e-51!34;UBERON:0003080!8.85e-51!42;UBERON:0002791!3.93e-49!33;UBERON:0001869!1.69e-46!32;UBERON:0002619!2.88e-36!22;UBERON:0003056!1.63e-34!61;UBERON:0000033!4.54e-32!123;UBERON:0001950!7.94e-32!20;UBERON:0000153!1.55e-31!129;UBERON:0007811!1.55e-31!129;UBERON:0000956!1.97e-31!25;UBERON:0000203!1.97e-31!25;UBERON:0000924!1.10e-30!173;UBERON:0006601!1.10e-30!173;UBERON:0004121!2.23e-30!169;UBERON:0003076!1.75e-23!15;UBERON:0003057!1.75e-23!15;UBERON:0002308!1.18e-22!9;UBERON:0000125!1.18e-22!9;UBERON:0002420!4.56e-22!9;UBERON:0007245!4.56e-22!9;UBERON:0010009!4.56e-22!9;UBERON:0010011!4.56e-22!9;UBERON:0000454!4.56e-22!9;UBERON:0004732!8.38e-19!13;UBERON:0009663!1.14e-17!7;UBERON:0000025!5.36e-17!194;UBERON:0004733!1.97e-16!12;UBERON:0002028!1.97e-16!12;UBERON:0007277!1.97e-16!12;UBERON:0002298!2.48e-16!8;UBERON:0000200!3.07e-15!6;UBERON:0000349!8.92e-13!5;UBERON:0000064!3.64e-12!219;UBERON:0004111!4.60e-12!241;UBERON:0001871!2.76e-11!7;UBERON:0000483!6.63e-11!309;UBERON:0000475!1.04e-10!365;UBERON:0000119!1.13e-10!312;UBERON:0000369!3.09e-10!4;UBERON:0002435!3.09e-10!4;UBERON:0000204!3.09e-10!4;UBERON:0010082!3.09e-10!4;UBERON:0002680!6.13e-10!9;UBERON:0001895!6.13e-10!9;UBERON:0010092!6.13e-10!9;UBERON:0000477!1.55e-09!286;UBERON:0002240!2.85e-09!3;UBERON:0006331!3.01e-09!3;UBERON:0000988!4.84e-09!3;UBERON:0001896!5.81e-09!3;UBERON:0005290!5.81e-09!3;UBERON:0010096!5.81e-09!3;UBERON:0002021!7.42e-09!5;UBERON:0001872!9.25e-09!5;UBERON:0002771!1.36e-08!3;UBERON:0005383!4.28e-08!3;UBERON:0005382!4.28e-08!3;UBERON:0005162!9.09e-07!2;UBERON:0000122!9.09e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.32e-66;34!UBERON:0003528;1.28e-64;34!UBERON:0002020;1.28e-64;34!UBERON:0002791;9.33e-63;32!UBERON:0001869;1.60e-62;32!UBERON:0000073;4.66e-57;53!UBERON:0002616;4.66e-57;53!UBERON:0002780;5.33e-56;41!UBERON:0001890;5.33e-56;41!UBERON:0002619;2.68e-54;22!UBERON:0001950;1.33e-47;20!UBERON:0000956;1.78e-47;25!UBERON:0000203;1.78e-47;25!UBERON:0001017;5.78e-41;75!UBERON:0000955;7.91e-40;68!UBERON:0000125;4.66e-33;9!UBERON:0002308;4.66e-33;9!UBERON:0001016;9.78e-33;83!UBERON:0002420;3.75e-32;9!UBERON:0007245;3.75e-32;9!UBERON:0010009;3.75e-32;9!UBERON:0010011;3.75e-32;9!UBERON:0000454;3.75e-32;9!UBERON:0004732;7.48e-28;13!UBERON:0009663;1.36e-25;7!UBERON:0004733;2.76e-24;12!UBERON:0002028;2.76e-24;12!UBERON:0002298;1.39e-23;6!UBERON:0000200;6.08e-22;6!UBERON:0007023;1.01e-18;114!UBERON:0000349;2.65e-18;5!UBERON:0002680;1.65e-14;9!UBERON:0001895;1.65e-14;9!UBERON:0000369;1.72e-14;4!UBERON:0002435;1.72e-14;4!UBERON:0000204;1.72e-14;4!UBERON:0001871;2.67e-13;6!UBERON:0002240;4.74e-13;3!UBERON:0005174;4.74e-13;3!UBERON:0001137;4.74e-13;3!UBERON:0011216;6.72e-13;132!UBERON:0000988;1.02e-12;3!UBERON:0002021;1.16e-12;5!UBERON:0001896;1.29e-12;3!UBERON:0005290;1.29e-12;3!UBERON:0001872;1.76e-12;5!UBERON:0001870;1.82e-11;3!UBERON:0005383;2.77e-11;3!UBERON:0005382;2.77e-11;3!UBERON:0005162;2.45e-09;2!UBERON:0000122;2.45e-09;2!UBERON:0002148;3.38e-09;2!UBERON:0006331;3.38e-09;2!UBERON:0009662;3.38e-09;2!UBERON:0010314;3.50e-09;132!UBERON:0001897;3.73e-09;2!UBERON:0010225;3.73e-09;2!UBERON:0001875;4.63e-09;2!UBERON:0006514;4.63e-09;2!UBERON:0002771;1.11e-08;2!UBERON:0001954;1.57e-08;2!UBERON:0003022;1.57e-08;2!UBERON:0002421;1.57e-08;2!UBERON:0002600;1.57e-08;2!UBERON:0001876;2.86e-08;2!UBERON:0002702;3.44e-08;2!UBERON:0001873;4.30e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.95e-115,56;UBERON:0005068,5.95e-115,56;UBERON:0006241,5.95e-115,56;UBERON:0007135,5.95e-115,56;UBERON:0000073,7.99e-104,53;UBERON:0002616,7.99e-104,53;UBERON:0001017,4.03e-92,81;UBERON:0000955,3.61e-91,68;UBERON:0006238,3.61e-91,68;UBERON:0001016,3.00e-86,89;UBERON:0003075,4.63e-80,82;UBERON:0007284,4.63e-80,82;UBERON:0002780,2.18e-79,41;UBERON:0001890,2.18e-79,41;UBERON:0003080,2.18e-79,41;UBERON:0006240,2.18e-79,41;UBERON:0003528,8.83e-78,34;UBERON:0002020,8.83e-78,34;UBERON:0001893,1.77e-77,34;UBERON:0002346,6.27e-76,86;UBERON:0002791,1.68e-70,32;UBERON:0001869,3.74e-70,32;UBERON:0010371,2.83e-67,104;UBERON:0007023,1.36e-61,114;UBERON:0003056,3.74e-55,61;UBERON:0002619,2.89e-54,22;UBERON:0010314,9.88e-49,132;UBERON:0001950,1.37e-47,20;UBERON:0000956,1.91e-47,25;UBERON:0000203,1.91e-47,25;UBERON:0004121,8.70e-45,171;UBERON:0000924,8.70e-45,171;UBERON:0006601,8.70e-45,171;UBERON:0003076,6.83e-35,15;UBERON:0003057,6.83e-35,15;UBERON:0000125,4.58e-33,9;UBERON:0002308,4.58e-33,9;UBERON:0002420,3.48e-32,9;UBERON:0007245,3.48e-32,9;UBERON:0010009,3.48e-32,9;UBERON:0010011,3.48e-32,9;UBERON:0000454,3.48e-32,9;UBERON:0011216,1.89e-30,223;UBERON:0004732,7.37e-28,13;UBERON:0000025,4.46e-27,192;UBERON:0009663,1.33e-25,7;UBERON:0004733,2.73e-24,12;UBERON:0002028,2.73e-24,12;UBERON:0007277,2.73e-24,12;UBERON:0002298,1.45e-23,6;UBERON:0000200,5.75e-22,6;UBERON:0004111,9.83e-20,240;UBERON:0000349,2.75e-18,5;UBERON:0000483,2.40e-16,306;UBERON:0000119,4.34e-16,309;UBERON:0002680,1.59e-14,9;UBERON:0001895,1.59e-14,9;UBERON:0010092,1.59e-14,9;UBERON:0000369,1.69e-14,4;UBERON:0002435,1.69e-14,4;UBERON:0000204,1.69e-14,4;UBERON:0010082,1.69e-14,4;UBERON:0001871,2.41e-13,6;UBERON:0002240,4.65e-13,3;UBERON:0005174,4.65e-13,3;UBERON:0001137,4.65e-13,3;UBERON:0000988,1.02e-12,3;UBERON:0002021,1.23e-12,5;UBERON:0001896,1.34e-12,3;UBERON:0005290,1.34e-12,3;UBERON:0010096,1.34e-12,3;UBERON:0001872,1.71e-12,5;UBERON:0001870,2.10e-11,3;UBERON:0005383,2.62e-11,3;UBERON:0005382,2.62e-11,3;UBERON:0005162,2.45e-09,2;UBERON:0000122,2.45e-09,2;UBERON:0002148,3.38e-09,2;UBERON:0006331,3.38e-09,2;UBERON:0009662,3.38e-09,2;UBERON:0001897,3.65e-09,2;UBERON:0010225,3.65e-09,2;UBERON:0001875,4.63e-09,2;UBERON:0006514,4.63e-09,2;UBERON:0002771,1.01e-08,2;UBERON:0001954,1.66e-08,2;UBERON:0003022,1.66e-08,2;UBERON:0002421,1.66e-08,2;UBERON:0002600,1.66e-08,2;UBERON:0001876,2.70e-08,2;UBERON:0002702,3.78e-08,2;UBERON:0001873,4.07e-08,2;UBERON:0010122,4.07e-08,2;UBERON:0000923,4.67e-07,560;UBERON:0010316,4.67e-07,560;UBERON:0005291,4.67e-07,560;UBERON:0006598,4.67e-07,560;UBERON:0010317,4.67e-07,560;UBERON:0002532,4.67e-07,560;UBERON:0002050,6.25e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,1.52795370223311,2.34434894420094,0,0.514137463516618,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94147647766298,8.8621732338623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.6506408281896,21.7077349698732,1.99613798001194,0,0,0,0,0,0,0,0,0,8.85741385813839,3.97968247463846,4.5774520895125,1.87984741883082,7.68423809279223,10.5304990633907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,48.7310191450295,0,55.0521447454547,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,8.04047108639659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.8201738580699,49.1490310222255,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,10.3379859675209,12.1221031439302,0,0,0,0,0,7.65444413891111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.2645780209588,39.2730827175789,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,31.7268288745104,10.01527445652,38.4184161112348,33.056857357982,26.4530676530294,0,0,1.21319294033318,2.56918800190471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9224164559867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.51481933628576,11.3357261060468,25.5414174491442,101.532600299174,0,8.78297106295567,11.7877221311251,284.111146315717,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4683256158512,26.5566553528708,14.2613889585817,10.4001928718007,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0,0,19.0315252335129,11.9048720148757,0,0,0,5.49904564706007,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,101.687785965542,71.8852288791548,32.1218352963384,0,0,0.0644578879735772,0,0,0,0,0,0,69.9497165779082,0,13.1903490970375,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,52.2376746859031,38.8908064440726,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p7@MBP | |||
}} |
Latest revision as of 17:08, 24 September 2015
Short description: | p7@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MBP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -349bp_to_BC130034_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|