FFCP PHASE1:Hg19::chr7:100550980..100551001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3Q6 | |UniProt=Q9H3Q6 | ||
|association_with_transcript=230bp_to_uc003uxk.1,uc003uxl.1_5end | |association_with_transcript=230bp_to_uc003uxk.1,uc003uxl.1_5end | ||
|cluster_id=chr7:100550980..100551001,+ | |||
|coexpression_cluster_id=C690 | |coexpression_cluster_id=C690 | ||
|description=CAGE_peak_4_at_uc003uxk.1_5end,CAGE_peak_4_at_uc003uxl.1_5end | |description=CAGE_peak_4_at_uc003uxk.1_5end,CAGE_peak_4_at_uc003uxl.1_5end | ||
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|ontology_enrichment_celltype=CL:0000039!9.74e-09!7;CL:0000586!9.74e-09!7 | |ontology_enrichment_celltype=CL:0000039!9.74e-09!7;CL:0000586!9.74e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.99e-10;2 | |ontology_enrichment_celltype_v019=CL:0000047;2.99e-10;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.06e-19;1 | |ontology_enrichment_development_v019=UBERON:0006242;2.06e-19;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.65e-12!27;UBERON:0005409!5.28e-09!35 | |ontology_enrichment_uberon=UBERON:0000160!3.65e-12!27;UBERON:0005409!5.28e-09!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.35e-33;4!UBERON:0000160;3.05e-25;17!UBERON:0005409;8.41e-20;22!UBERON:0002146;3.91e-19;1!UBERON:0005623;3.91e-19;1!UBERON:0004921;4.14e-12;33!UBERON:0001155;5.64e-09;9!UBERON:0000059;1.67e-07;11!UBERON:0002110;2.40e-07;3!UBERON:0002114;2.40e-07;2!UBERON:0003978;2.97e-07;3!UBERON:0000946;2.97e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002108;2.35e-33;4!UBERON:0000160;3.05e-25;17!UBERON:0005409;8.41e-20;22!UBERON:0002146;3.91e-19;1!UBERON:0005623;3.91e-19;1!UBERON:0004921;4.14e-12;33!UBERON:0001155;5.64e-09;9!UBERON:0000059;1.67e-07;11!UBERON:0002110;2.40e-07;3!UBERON:0002114;2.40e-07;2!UBERON:0003978;2.97e-07;3!UBERON:0000946;2.97e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.23e-33,4;UBERON:0000160,2.69e-25,17;UBERON:0002146,3.91e-19,1;UBERON:0005623,3.91e-19,1;UBERON:0005409,1.42e-17,25;UBERON:0001155,5.20e-09,9;UBERON:0000059,1.56e-07,11;UBERON:0002114,2.32e-07,2;UBERON:0002110,2.47e-07,3;UBERON:0006242,2.47e-07,3;UBERON:0003978,2.97e-07,3;UBERON:0009751,2.97e-07,3;UBERON:0000946,2.97e-07,3;UBERON:0002523,2.97e-07,3;UBERON:0005983,2.97e-07,3;UBERON:0002165,2.97e-07,3;UBERON:0002062,2.97e-07,3;UBERON:0007280,2.97e-07,3 | |||
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| ||
|short_description=p4@uc003uxk.1,p4@uc003uxl.1 | |short_description=p4@uc003uxk.1,p4@uc003uxl.1 | ||
}} | }} |
Latest revision as of 15:08, 24 September 2015
Short description: | p4@uc003uxk.1, p4@uc003uxl.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_uc003uxk.1_5end, CAGE_peak_4_at_uc003uxl.1_5end |
Coexpression cluster: | C690_duodenum_small_temporal_gall_colon_Neurons_Hepatocyte |
Association with transcript: | 230bp_to_uc003uxk.1, uc003uxl.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.23e-33 | 4 |
intestine | 2.69e-25 | 17 |
pulmonary valve | 3.91e-19 | 1 |
semi-lunar valve | 3.91e-19 | 1 |
gastrointestinal system | 1.42e-17 | 25 |
colon | 5.20e-09 | 9 |
large intestine | 1.56e-07 | 11 |
duodenum | 2.32e-07 | 2 |
gallbladder | 2.47e-07 | 3 |
gall bladder primordium | 2.47e-07 | 3 |
valve | 2.97e-07 | 3 |
cardiac mesenchyme | 2.97e-07 | 3 |
cardial valve | 2.97e-07 | 3 |
tunica intima | 2.97e-07 | 3 |
heart layer | 2.97e-07 | 3 |
endocardium | 2.97e-07 | 3 |
endocardial cushion | 2.97e-07 | 3 |
presumptive endocardium | 2.97e-07 | 3 |