FFCP PHASE1:Hg19::chr7:100425130..100425153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2050 | |EntrezGene=2050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3395 | |HGNC=3395 | ||
|TSSclassifier=strong | |||
|UniProt=P54760,Q541P7,Q7Z635,Q96L35 | |UniProt=P54760,Q541P7,Q7Z635,Q96L35 | ||
|association_with_transcript=0bp_to_NM_004444,uc003uwn.1,uc010lhj.1,uc011kkf.1,uc011kkg.1,uc011kkh.1_5end | |association_with_transcript=0bp_to_NM_004444,uc003uwn.1,uc010lhj.1,uc011kkf.1,uc011kkg.1,uc011kkh.1_5end | ||
|cluster_id=chr7:100425130..100425153,- | |||
|description=CAGE_peak_1_at_EPHB4_5end | |description=CAGE_peak_1_at_EPHB4_5end | ||
|id=chr7:100425130..100425153,- | |id=chr7:100425130..100425153,- | ||
|ontology_enrichment_celltype=CL:0000066!5.92e-39!254;CL:0002321!5.30e-36!248;CL:0000220!5.56e-35!246;CL:0000115!8.51e-17!35;CL:0002078!8.67e-17!44;CL:0002139!5.82e-16!24;CL:0000222!8.49e-14!119;CL:0000213!4.42e-13!57;CL:0000215!4.42e-13!57;CL:0000223!4.63e-13!59;CL:0000076!1.91e-12!62;CL:0000071!2.09e-12!18;CL:0002546!2.09e-12!18;CL:0002076!5.09e-10!43;CL:1000449!6.59e-09!16;CL:1000497!8.78e-08!18;CL:0002518!8.78e-08!18;CL:0002681!2.15e-07!13;CL:0002584!2.15e-07!13;CL:0000221!2.17e-07!71;CL:1000413!8.03e-07!9 | |ontology_enrichment_celltype=CL:0000066!5.92e-39!254;CL:0002321!5.30e-36!248;CL:0000220!5.56e-35!246;CL:0000115!8.51e-17!35;CL:0002078!8.67e-17!44;CL:0002139!5.82e-16!24;CL:0000222!8.49e-14!119;CL:0000213!4.42e-13!57;CL:0000215!4.42e-13!57;CL:0000223!4.63e-13!59;CL:0000076!1.91e-12!62;CL:0000071!2.09e-12!18;CL:0002546!2.09e-12!18;CL:0002076!5.09e-10!43;CL:1000449!6.59e-09!16;CL:1000497!8.78e-08!18;CL:0002518!8.78e-08!18;CL:0002681!2.15e-07!13;CL:0002584!2.15e-07!13;CL:0000221!2.17e-07!71;CL:1000413!8.03e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.69e-16;24!CL:0000115;9.85e-15;36!CL:0000071;1.77e-12;18!CL:0002078;1.60e-11;45!CL:1000449;4.33e-09;15!CL:0000213;6.95e-09;58!CL:0000215;6.95e-09;58!CL:0002076;3.77e-08;42!CL:1000497;6.57e-08;17!CL:0002518;6.57e-08;17!CL:0002681;1.42e-07;12!CL:0002584;1.42e-07;12!CL:0000076;5.15e-07;63!CL:1000413;7.51e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.41e-39,253;CL:0002321,6.24e-37,250;CL:0000115,1.02e-17,36;CL:0002078,1.14e-17,45;CL:0002139,4.61e-16,24;CL:0000222,1.55e-14,121;CL:0000213,7.93e-14,58;CL:0000215,7.93e-14,58;CL:0000223,1.76e-13,58;CL:0000071,1.75e-12,18;CL:0002546,1.75e-12,18;CL:0000076,4.33e-12,63;CL:0002076,2.00e-10,42;CL:1000449,4.25e-09,15;CL:1000497,6.85e-08,17;CL:0002518,6.85e-08,17;CL:0002681,1.43e-07,12;CL:0002584,1.43e-07,12;CL:0000221,3.89e-07,72;CL:1000413,7.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.77e-12;18!CL:0000223;9.78e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.36e-22!118;UBERON:0003104!2.04e-19!238;UBERON:0009142!2.04e-19!238;UBERON:0000119!1.76e-18!312;UBERON:0000483!5.52e-18!309;UBERON:0000468!8.85e-18!659;UBERON:0002100!1.03e-17!216;UBERON:0000481!1.13e-17!347;UBERON:0002049!3.48e-15!79;UBERON:0007798!3.48e-15!79;UBERON:0005177!1.54e-14!107;UBERON:0004872!2.25e-14!84;UBERON:0000490!3.03e-14!138;UBERON:0000466!3.71e-14!126;UBERON:0005256!4.76e-14!143;UBERON:0004119!9.86e-14!169;UBERON:0000925!9.86e-14!169;UBERON:0006595!9.86e-14!169;UBERON:0004111!1.02e-13!241;UBERON:0009569!1.14e-13!113;UBERON:0000477!1.27e-13!286;UBERON:0000475!3.66e-13!365;UBERON:0000055!4.71e-13!69;UBERON:0000922!6.66e-13!612;UBERON:0001986!2.09e-12!18;UBERON:0004638!2.09e-12!18;UBERON:0004852!2.09e-12!18;UBERON:0000467!3.80e-12!625;UBERON:0000480!7.48e-12!626;UBERON:0001048!7.91e-12!168;UBERON:0005172!7.96e-12!55;UBERON:0005173!7.96e-12!55;UBERON:0000487!1.21e-11!22;UBERON:0001981!2.49e-11!60;UBERON:0007500!2.49e-11!60;UBERON:0004537!2.49e-11!60;UBERON:0006965!2.49e-11!60;UBERON:0001008!2.96e-11!45;UBERON:0003103!3.08e-11!69;UBERON:0002050!4.42e-11!605;UBERON:0005423!4.42e-11!605;UBERON:0006554!4.78e-11!44;UBERON:0000464!5.08e-11!104;UBERON:0000923!7.85e-11!604;UBERON:0005291!7.85e-11!604;UBERON:0006598!7.85e-11!604;UBERON:0002532!7.85e-11!604;UBERON:0006914!3.78e-10!25;UBERON:0002417!1.03e-09!61;UBERON:0000916!1.03e-09!61;UBERON:0001007!1.44e-09!155;UBERON:0001555!1.44e-09!155;UBERON:0007026!1.44e-09!155;UBERON:0001009!3.70e-09!113;UBERON:0000077!5.09e-09!130;UBERON:0004211!6.59e-09!16;UBERON:0001285!6.59e-09!16;UBERON:0007684!6.59e-09!16;UBERON:0003220!6.59e-09!16;UBERON:0004208!6.59e-09!16;UBERON:0003064!8.24e-09!37;UBERON:0006555!1.23e-08!17;UBERON:0005103!1.23e-08!17;UBERON:0000083!1.23e-08!17;UBERON:0009201!1.23e-08!17;UBERON:0004819!1.23e-08!17;UBERON:0006553!1.23e-08!17;UBERON:0003074!1.23e-08!17;UBERON:0003060!1.23e-08!17;UBERON:0004535!1.39e-08!110;UBERON:0002113!1.42e-08!27;UBERON:0003918!1.42e-08!27;UBERON:0005095!1.42e-08!27;UBERON:0007687!1.42e-08!27;UBERON:0000080!2.07e-08!18;UBERON:0002120!2.07e-08!18;UBERON:0004875!2.07e-08!18;UBERON:0005721!2.07e-08!18;UBERON:0005754!2.07e-08!18;UBERON:0007297!2.07e-08!18;UBERON:0000025!2.70e-08!194;UBERON:0003887!2.72e-08!21;UBERON:0004876!5.61e-08!20;UBERON:0002553!8.89e-08!70;UBERON:0001851!1.40e-07!16;UBERON:0005911!1.84e-07!82;UBERON:0001444!1.88e-07!48;UBERON:0004921!1.99e-07!129;UBERON:0004185!1.99e-07!129;UBERON:0001225!2.15e-07!13;UBERON:0008987!2.15e-07!13;UBERON:0003886!3.65e-07!63;UBERON:0000353!3.92e-07!17;UBERON:0000489!5.18e-07!32;UBERON:0000058!5.80e-07!26;UBERON:0003915!8.03e-07!9;UBERON:0004700!8.03e-07!9;UBERON:0001917!8.03e-07!9 | |ontology_enrichment_uberon=UBERON:0003914!2.36e-22!118;UBERON:0003104!2.04e-19!238;UBERON:0009142!2.04e-19!238;UBERON:0000119!1.76e-18!312;UBERON:0000483!5.52e-18!309;UBERON:0000468!8.85e-18!659;UBERON:0002100!1.03e-17!216;UBERON:0000481!1.13e-17!347;UBERON:0002049!3.48e-15!79;UBERON:0007798!3.48e-15!79;UBERON:0005177!1.54e-14!107;UBERON:0004872!2.25e-14!84;UBERON:0000490!3.03e-14!138;UBERON:0000466!3.71e-14!126;UBERON:0005256!4.76e-14!143;UBERON:0004119!9.86e-14!169;UBERON:0000925!9.86e-14!169;UBERON:0006595!9.86e-14!169;UBERON:0004111!1.02e-13!241;UBERON:0009569!1.14e-13!113;UBERON:0000477!1.27e-13!286;UBERON:0000475!3.66e-13!365;UBERON:0000055!4.71e-13!69;UBERON:0000922!6.66e-13!612;UBERON:0001986!2.09e-12!18;UBERON:0004638!2.09e-12!18;UBERON:0004852!2.09e-12!18;UBERON:0000467!3.80e-12!625;UBERON:0000480!7.48e-12!626;UBERON:0001048!7.91e-12!168;UBERON:0005172!7.96e-12!55;UBERON:0005173!7.96e-12!55;UBERON:0000487!1.21e-11!22;UBERON:0001981!2.49e-11!60;UBERON:0007500!2.49e-11!60;UBERON:0004537!2.49e-11!60;UBERON:0006965!2.49e-11!60;UBERON:0001008!2.96e-11!45;UBERON:0003103!3.08e-11!69;UBERON:0002050!4.42e-11!605;UBERON:0005423!4.42e-11!605;UBERON:0006554!4.78e-11!44;UBERON:0000464!5.08e-11!104;UBERON:0000923!7.85e-11!604;UBERON:0005291!7.85e-11!604;UBERON:0006598!7.85e-11!604;UBERON:0002532!7.85e-11!604;UBERON:0006914!3.78e-10!25;UBERON:0002417!1.03e-09!61;UBERON:0000916!1.03e-09!61;UBERON:0001007!1.44e-09!155;UBERON:0001555!1.44e-09!155;UBERON:0007026!1.44e-09!155;UBERON:0001009!3.70e-09!113;UBERON:0000077!5.09e-09!130;UBERON:0004211!6.59e-09!16;UBERON:0001285!6.59e-09!16;UBERON:0007684!6.59e-09!16;UBERON:0003220!6.59e-09!16;UBERON:0004208!6.59e-09!16;UBERON:0003064!8.24e-09!37;UBERON:0006555!1.23e-08!17;UBERON:0005103!1.23e-08!17;UBERON:0000083!1.23e-08!17;UBERON:0009201!1.23e-08!17;UBERON:0004819!1.23e-08!17;UBERON:0006553!1.23e-08!17;UBERON:0003074!1.23e-08!17;UBERON:0003060!1.23e-08!17;UBERON:0004535!1.39e-08!110;UBERON:0002113!1.42e-08!27;UBERON:0003918!1.42e-08!27;UBERON:0005095!1.42e-08!27;UBERON:0007687!1.42e-08!27;UBERON:0000080!2.07e-08!18;UBERON:0002120!2.07e-08!18;UBERON:0004875!2.07e-08!18;UBERON:0005721!2.07e-08!18;UBERON:0005754!2.07e-08!18;UBERON:0007297!2.07e-08!18;UBERON:0000025!2.70e-08!194;UBERON:0003887!2.72e-08!21;UBERON:0004876!5.61e-08!20;UBERON:0002553!8.89e-08!70;UBERON:0001851!1.40e-07!16;UBERON:0005911!1.84e-07!82;UBERON:0001444!1.88e-07!48;UBERON:0004921!1.99e-07!129;UBERON:0004185!1.99e-07!129;UBERON:0001225!2.15e-07!13;UBERON:0008987!2.15e-07!13;UBERON:0003886!3.65e-07!63;UBERON:0000353!3.92e-07!17;UBERON:0000489!5.18e-07!32;UBERON:0000058!5.80e-07!26;UBERON:0003915!8.03e-07!9;UBERON:0004700!8.03e-07!9;UBERON:0001917!8.03e-07!9 | ||
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|short_description=p1@EPHB4 | |short_description=p1@EPHB4 | ||
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Latest revision as of 14:31, 24 September 2015
Short description: | p1@EPHB4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPHB4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_004444, uc003uwn.1, uc010lhj.1, uc011kkf.1, uc011kkg.1, uc011kkh.1_5end |
EntrezGene: | EPHB4 |
HGNC: | 3395 |
UniProt: | P54760Q541P7Q7Z635Q96L35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.41e-39 | 253 |
embryonic cell | 6.24e-37 | 250 |
endothelial cell | 1.02e-17 | 36 |
meso-epithelial cell | 1.14e-17 | 45 |
endothelial cell of vascular tree | 4.61e-16 | 24 |
mesodermal cell | 1.55e-14 | 121 |
lining cell | 7.93e-14 | 58 |
barrier cell | 7.93e-14 | 58 |
endodermal cell | 1.76e-13 | 58 |
blood vessel endothelial cell | 1.75e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.75e-12 | 18 |
squamous epithelial cell | 4.33e-12 | 63 |
endo-epithelial cell | 2.00e-10 | 42 |
epithelial cell of nephron | 4.25e-09 | 15 |
kidney cell | 6.85e-08 | 17 |
kidney epithelial cell | 6.85e-08 | 17 |
kidney cortical cell | 1.43e-07 | 12 |
renal cortical epithelial cell | 1.43e-07 | 12 |
ectodermal cell | 3.89e-07 | 72 |
endothelial cell of artery | 7.37e-07 | 9 |