FFCP PHASE1:Hg19::chr2:21233749..21233760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=170bp_to_X03326_5end | |association_with_transcript=170bp_to_X03326_5end | ||
|cluster_id=chr2:21233749..21233760,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_29_at_APOB_5end | |description=CAGE_peak_29_at_APOB_5end | ||
|id=chr2:21233749..21233760,- | |id=chr2:21233749..21233760,- | ||
|ontology_enrichment_celltype=CL:0000181!6.94e-37!12;CL:0000417!6.94e-37!12;CL:0000668!6.94e-37!12;CL:0000414!6.94e-37!12;CL:0000412!6.94e-37!12;CL:0000182!6.94e-37!12;CL:0000223!6.48e-14!59;CL:0002563!1.02e-09!4 | |ontology_enrichment_celltype=CL:0000181!6.94e-37!12;CL:0000417!6.94e-37!12;CL:0000668!6.94e-37!12;CL:0000414!6.94e-37!12;CL:0000412!6.94e-37!12;CL:0000182!6.94e-37!12;CL:0000223!6.48e-14!59;CL:0002563!1.02e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.67e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.68e-38,12;CL:0000223,6.12e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.99e-41;11!UBERON:0009497;9.10e-35;13!UBERON:0001041;3.46e-15;30!UBERON:0003104;1.15e-14;31 | |||
|ontology_enrichment_disease=DOID:178!3.61e-10!1;DOID:326!3.61e-10!1;DOID:3978!3.61e-10!1;DOID:3394!3.61e-10!1;DOID:5844!3.61e-10!1 | |ontology_enrichment_disease=DOID:178!3.61e-10!1;DOID:326!3.61e-10!1;DOID:3978!3.61e-10!1;DOID:3394!3.61e-10!1;DOID:5844!3.61e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.56e-38!19;UBERON:0006925!4.56e-38!19;UBERON:0008836!4.56e-38!19;UBERON:0008835!1.01e-32!22;UBERON:0003894!1.01e-32!22;UBERON:0009854!3.01e-31!23;UBERON:0007499!1.18e-28!25;UBERON:0009497!1.18e-28!25;UBERON:0000015!1.18e-28!25;UBERON:0002423!1.18e-28!25;UBERON:0006235!1.18e-28!25;UBERON:0004161!1.18e-28!25;UBERON:0005057!1.66e-27!26;UBERON:0009856!1.66e-27!26;UBERON:0002365!7.05e-23!31;UBERON:0002330!7.05e-23!31;UBERON:0003929!2.20e-22!54;UBERON:0002368!3.99e-20!35;UBERON:0000949!2.23e-15!45;UBERON:0004921!2.40e-15!129;UBERON:0004185!2.40e-15!129;UBERON:0002530!4.16e-14!59;UBERON:0005911!4.38e-14!82;UBERON:0005172!2.37e-12!55;UBERON:0005173!2.37e-12!55;UBERON:0001007!2.42e-12!155;UBERON:0001555!2.42e-12!155;UBERON:0007026!2.42e-12!155;UBERON:0000160!3.56e-11!27;UBERON:0004119!4.19e-11!169;UBERON:0000925!4.19e-11!169;UBERON:0006595!4.19e-11!169;UBERON:0002417!5.18e-11!61;UBERON:0000916!5.18e-11!61;UBERON:0006122!1.89e-10!1;UBERON:0001242!1.02e-09!4;UBERON:0001262!1.02e-09!4;UBERON:0004786!1.02e-09!4;UBERON:0004808!1.02e-09!4;UBERON:0001277!1.02e-09!4;UBERON:0005409!1.36e-08!35;UBERON:0003350!6.02e-08!5;UBERON:0000490!1.42e-07!138;UBERON:0000077!8.54e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.68e-46;19!UBERON:0006925;2.68e-46;19!UBERON:0002423;3.58e-35;25!UBERON:0002108;1.43e-32;4!UBERON:0002365;5.17e-27;31!UBERON:0002330;5.17e-27;31!UBERON:0002368;4.59e-24;33!UBERON:0000949;1.63e-17;43!UBERON:0001007;1.26e-10;81!UBERON:0005172;1.54e-10;52!UBERON:0005173;1.54e-10;52!UBERON:0002530;6.61e-10;57!UBERON:0000160;1.49e-09;17!UBERON:0002417;1.13e-08;58!UBERON:0000916;1.13e-08;58!UBERON:0005409;1.33e-07;22!UBERON:0002114;2.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.50e-46,19;UBERON:0006925,2.50e-46,19;UBERON:0008836,2.50e-46,19;UBERON:0008835,5.28e-40,22;UBERON:0003894,5.28e-40,22;UBERON:0009854,2.91e-38,23;UBERON:0007499,3.40e-35,25;UBERON:0009497,3.40e-35,25;UBERON:0000015,3.40e-35,25;UBERON:0002423,3.40e-35,25;UBERON:0006235,3.40e-35,25;UBERON:0004161,3.40e-35,25;UBERON:0009856,7.75e-34,26;UBERON:0002108,1.43e-32,4;UBERON:0002365,2.32e-28,31;UBERON:0002330,2.32e-28,31;UBERON:0002368,4.21e-25,35;UBERON:0000949,1.76e-19,45;UBERON:0003929,3.41e-16,54;UBERON:0005172,3.41e-16,54;UBERON:0005173,3.41e-16,54;UBERON:0002530,8.48e-15,59;UBERON:0004921,1.47e-14,118;UBERON:0002417,1.51e-14,60;UBERON:0000916,1.51e-14,60;UBERON:0001007,9.58e-12,145;UBERON:0001555,9.58e-12,145;UBERON:0007026,9.58e-12,145;UBERON:0004119,1.38e-10,160;UBERON:0000925,1.38e-10,160;UBERON:0006595,1.38e-10,160;UBERON:0005911,1.47e-10,82;UBERON:0001041,6.26e-10,87;UBERON:0000160,1.49e-09,17;UBERON:0011216,6.17e-09,223;UBERON:0005177,1.68e-08,101;UBERON:0009569,1.26e-07,112;UBERON:0003914,2.79e-07,117;UBERON:0002114,3.35e-07,2;UBERON:0005256,5.78e-07,122;UBERON:0005409,8.71e-07,25 | |||
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|short_description=p29@APOB | |short_description=p29@APOB | ||
}} | }} |
Latest revision as of 23:33, 19 September 2015
Short description: | p29@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 170bp_to_X03326_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.68e-38 | 12 |
endodermal cell | 6.12e-08 | 58 |