FFCP PHASE1:Hg19::chr3:79817136..79817155,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:79817136..79817155,- to FFCP PHASE1:Hg19::chr3:79817136..79817155,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6091 | |EntrezGene=6091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10249 | |HGNC=10249 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6N7 | |UniProt=Q9Y6N7 | ||
|association_with_transcript=-77bp_to_NM_002941,uc003dqe.2_5end | |||
|cluster_id=chr3:79817136..79817155,- | |||
|coexpression_cluster_id=C2754 | |||
|description=CAGE_peak_4_at_ROBO1_5end | |||
|id=chr3:79817136..79817155,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002564;5.15e-09;3!CL:0002590;2.09e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,5.10e-09,3;CL:0002590,2.73e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.28e-08;3!UBERON:0003057;1.28e-08;3!UBERON:0006601;1.64e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.17e-43!86;UBERON:0000073!1.32e-43!94;UBERON:0001016!1.32e-43!94;UBERON:0001017!9.69e-42!82;UBERON:0002616!5.02e-41!59;UBERON:0001049!1.22e-38!57;UBERON:0005068!1.22e-38!57;UBERON:0006241!1.22e-38!57;UBERON:0007135!1.22e-38!57;UBERON:0002346!1.53e-37!90;UBERON:0000955!4.92e-37!69;UBERON:0006238!4.92e-37!69;UBERON:0003075!5.07e-37!86;UBERON:0007284!5.07e-37!86;UBERON:0002780!1.42e-29!41;UBERON:0001890!1.42e-29!41;UBERON:0006240!1.42e-29!41;UBERON:0003056!9.94e-29!61;UBERON:0003080!1.32e-28!42;UBERON:0002020!1.16e-26!34;UBERON:0003528!1.16e-26!34;UBERON:0001869!3.24e-26!32;UBERON:0000153!5.00e-26!129;UBERON:0007811!5.00e-26!129;UBERON:0001893!5.23e-26!34;UBERON:0000924!7.35e-26!173;UBERON:0006601!7.35e-26!173;UBERON:0004121!4.47e-25!169;UBERON:0000033!5.19e-25!123;UBERON:0002791!5.21e-25!33;UBERON:0007023!1.37e-20!115;UBERON:0000956!5.40e-18!25;UBERON:0000203!5.40e-18!25;UBERON:0002619!1.99e-17!22;UBERON:0001950!5.19e-15!20;UBERON:0003076!5.76e-11!15;UBERON:0003057!5.76e-11!15;UBERON:0002308!2.50e-10!9;UBERON:0000125!2.50e-10!9;UBERON:0002420!2.72e-10!9;UBERON:0007245!2.72e-10!9;UBERON:0010009!2.72e-10!9;UBERON:0010011!2.72e-10!9;UBERON:0000454!2.72e-10!9;UBERON:0000477!7.86e-10!286;UBERON:0000481!8.02e-10!347;UBERON:0000119!4.45e-09!312;UBERON:0000483!1.71e-08!309;UBERON:0005174!3.10e-08!5;UBERON:0001137!3.10e-08!5;UBERON:0000349!3.48e-08!5;UBERON:0001871!3.67e-08!7;UBERON:0005284!6.98e-08!5;UBERON:0000025!7.96e-08!194;UBERON:0009663!9.27e-08!7;UBERON:0000922!1.45e-07!612;UBERON:0004733!1.51e-07!12;UBERON:0002028!1.51e-07!12;UBERON:0007277!1.51e-07!12;UBERON:0002200!4.30e-07!11;UBERON:0006876!4.30e-07!11;UBERON:0000369!4.45e-07!4;UBERON:0002435!4.45e-07!4;UBERON:0000204!4.45e-07!4;UBERON:0010082!4.45e-07!4;UBERON:0000064!4.57e-07!219;UBERON:0000475!7.38e-07!365;UBERON:0004732!8.23e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.25e-21;34!UBERON:0002020;1.25e-21;34!UBERON:0001869;2.46e-20;32!UBERON:0002780;1.69e-19;41!UBERON:0001890;1.69e-19;41!UBERON:0002791;5.47e-19;32!UBERON:0000073;6.61e-19;53!UBERON:0002616;6.61e-19;53!UBERON:0001017;2.62e-18;75!UBERON:0000125;8.83e-18;9!UBERON:0002308;8.83e-18;9!UBERON:0001893;9.40e-18;34!UBERON:0002420;9.99e-18;9!UBERON:0007245;9.99e-18;9!UBERON:0010009;9.99e-18;9!UBERON:0010011;9.99e-18;9!UBERON:0000454;9.99e-18;9!UBERON:0000955;2.24e-16;68!UBERON:0001016;8.61e-15;83!UBERON:0011135;5.32e-14;5!UBERON:0002216;5.32e-14;5!UBERON:0011134;5.32e-14;5!UBERON:0002209;5.32e-14;5!UBERON:0002213;5.32e-14;5!UBERON:0007844;5.32e-14;5!UBERON:0011138;5.32e-14;5!UBERON:0001130;5.32e-14;5!UBERON:0001066;5.32e-14;5!UBERON:0001468;5.32e-14;5!UBERON:0000349;2.03e-13;5!UBERON:0002619;2.08e-13;22!UBERON:0009663;3.61e-13;7!UBERON:0005284;4.59e-13;5!UBERON:0000956;1.56e-11;25!UBERON:0000203;1.56e-11;25!UBERON:0000369;1.92e-11;4!UBERON:0002435;1.92e-11;4!UBERON:0000204;1.92e-11;4!UBERON:0002298;2.84e-10;6!UBERON:0001950;3.74e-10;20!UBERON:0001871;4.95e-09;6!UBERON:0002242;5.15e-09;3!UBERON:0005383;5.15e-09;3!UBERON:0005382;5.15e-09;3!UBERON:0011216;6.66e-09;132!UBERON:0002240;1.28e-08;3!UBERON:0005174;1.28e-08;3!UBERON:0001137;1.28e-08;3!UBERON:0004905;1.45e-08;8!UBERON:0000982;1.45e-08;8!UBERON:0004770;1.45e-08;8!UBERON:0000988;2.59e-08;3!UBERON:0006876;6.09e-08;11!UBERON:0004733;8.39e-07;12!UBERON:0002028;8.39e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-40,81;UBERON:0001016,1.10e-37,89;UBERON:0001049,4.60e-37,56;UBERON:0005068,4.60e-37,56;UBERON:0006241,4.60e-37,56;UBERON:0007135,4.60e-37,56;UBERON:0000955,3.83e-35,68;UBERON:0006238,3.83e-35,68;UBERON:0000073,1.28e-31,53;UBERON:0002616,1.28e-31,53;UBERON:0002346,3.78e-28,86;UBERON:0003075,4.88e-28,82;UBERON:0007284,4.88e-28,82;UBERON:0002780,5.23e-26,41;UBERON:0001890,5.23e-26,41;UBERON:0003080,5.23e-26,41;UBERON:0006240,5.23e-26,41;UBERON:0003528,1.86e-24,34;UBERON:0002020,1.86e-24,34;UBERON:0001869,4.05e-23,32;UBERON:0010371,1.16e-21,104;UBERON:0001893,1.70e-21,34;UBERON:0004121,3.78e-21,171;UBERON:0000924,3.78e-21,171;UBERON:0006601,3.78e-21,171;UBERON:0002791,8.82e-21,32;UBERON:0003056,9.38e-21,61;UBERON:0011216,4.17e-20,223;UBERON:0000125,1.05e-17,9;UBERON:0002308,1.05e-17,9;UBERON:0002420,1.23e-17,9;UBERON:0007245,1.23e-17,9;UBERON:0010009,1.23e-17,9;UBERON:0010011,1.23e-17,9;UBERON:0000454,1.23e-17,9;UBERON:0010314,3.91e-16,132;UBERON:0011135,5.42e-14,5;UBERON:0002216,5.42e-14,5;UBERON:0011134,5.42e-14,5;UBERON:0002209,5.42e-14,5;UBERON:0002213,5.42e-14,5;UBERON:0005856,5.42e-14,5;UBERON:0005866,5.42e-14,5;UBERON:0005863,5.42e-14,5;UBERON:0007844,5.42e-14,5;UBERON:0011138,5.42e-14,5;UBERON:0001130,5.42e-14,5;UBERON:0001066,5.42e-14,5;UBERON:0001468,5.42e-14,5;UBERON:0002619,1.82e-13,22;UBERON:0000349,1.84e-13,5;UBERON:0009663,4.45e-13,7;UBERON:0005284,6.41e-13,5;UBERON:0003076,4.50e-12,15;UBERON:0003057,4.50e-12,15;UBERON:0000956,1.39e-11,25;UBERON:0000203,1.39e-11,25;UBERON:0000369,1.76e-11,4;UBERON:0002435,1.76e-11,4;UBERON:0000204,1.76e-11,4;UBERON:0010082,1.76e-11,4;UBERON:0007023,1.46e-10,114;UBERON:0002298,2.06e-10,6;UBERON:0001950,3.44e-10,20;UBERON:0005383,4.71e-09,3;UBERON:0005382,4.71e-09,3;UBERON:0001871,4.92e-09,6;UBERON:0002242,5.10e-09,3;UBERON:0003068,5.10e-09,3;UBERON:0002328,5.10e-09,3;UBERON:0004880,5.10e-09,3;UBERON:0002240,1.41e-08,3;UBERON:0005174,1.41e-08,3;UBERON:0001137,1.41e-08,3;UBERON:0004905,1.47e-08,8;UBERON:0000982,1.47e-08,8;UBERON:0004770,1.47e-08,8;UBERON:0000988,2.66e-08,3;UBERON:0000025,4.07e-08,192;UBERON:0006876,7.31e-08,11;UBERON:0004733,7.10e-07,12;UBERON:0002028,7.10e-07,12;UBERON:0007277,7.10e-07,12 | |||
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| ||
|short_description=p4@ROBO1 | |||
}} | }} |
Latest revision as of 16:51, 19 September 2015
Short description: | p4@ROBO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ROBO1_5end |
Coexpression cluster: | C2754_temporal_duodenum_nonsmall_occipital_parietal_Nucleus_putamen |
Association with transcript: | -77bp_to_NM_002941, uc003dqe.2_5end |
EntrezGene: | ROBO1 |
HGNC: | 10249 |
UniProt: | Q9Y6N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 5.10e-09 | 3 |
smooth muscle cell of the brain vasculature | 2.73e-08 | 3 |