FFCP PHASE1:Hg19::chr6:72596604..72596697,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt=E7EX08,E7ENC2,E7ERQ1,E9PHR1,C9JNW6,B7Z2Q9,Q3ZCW0,Q86UR5 | |UniProt=E7EX08,E7ENC2,E7ERQ1,E9PHR1,C9JNW6,B7Z2Q9,Q3ZCW0,Q86UR5 | ||
|association_with_transcript=0bp_to_ENST00000346609,ENST00000348717,ENST00000349908,ENST00000350827,ENST00000352008,NM_014989,uc003pga.2_5end | |association_with_transcript=0bp_to_ENST00000346609,ENST00000348717,ENST00000349908,ENST00000350827,ENST00000352008,NM_014989,uc003pga.2_5end | ||
|cluster_id=chr6:72596604..72596697,+ | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_1_at_RIMS1_5end | |description=CAGE_peak_1_at_RIMS1_5end | ||
|id=chr6:72596604..72596697,+ | |id=chr6:72596604..72596697,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.23e-18;82!UBERON:0006215;1.68e-11;3!UBERON:0010122;1.39e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.01e-60!57;UBERON:0005068!8.01e-60!57;UBERON:0006241!8.01e-60!57;UBERON:0007135!8.01e-60!57;UBERON:0001017!2.19e-55!82;UBERON:0005743!5.80e-54!86;UBERON:0000073!1.49e-52!94;UBERON:0001016!1.49e-52!94;UBERON:0002616!9.60e-50!59;UBERON:0000955!4.85e-48!69;UBERON:0006238!4.85e-48!69;UBERON:0002780!1.29e-45!41;UBERON:0001890!1.29e-45!41;UBERON:0006240!1.29e-45!41;UBERON:0003080!3.06e-44!42;UBERON:0003075!3.73e-42!86;UBERON:0007284!3.73e-42!86;UBERON:0002020!1.82e-41!34;UBERON:0003528!1.82e-41!34;UBERON:0001893!1.88e-41!34;UBERON:0002346!5.22e-41!90;UBERON:0002791!6.03e-40!33;UBERON:0001869!4.53e-39!32;UBERON:0007023!3.41e-35!115;UBERON:0002619!1.67e-33!22;UBERON:0001950!3.02e-30!20;UBERON:0003056!7.59e-30!61;UBERON:0000956!1.07e-28!25;UBERON:0000203!1.07e-28!25;UBERON:0004121!2.72e-25!169;UBERON:0000924!3.86e-25!173;UBERON:0006601!3.86e-25!173;UBERON:0000033!3.78e-23!123;UBERON:0000153!2.44e-22!129;UBERON:0007811!2.44e-22!129;UBERON:0003076!4.58e-16!15;UBERON:0003057!4.58e-16!15;UBERON:0002420!1.69e-14!9;UBERON:0007245!1.69e-14!9;UBERON:0010009!1.69e-14!9;UBERON:0010011!1.69e-14!9;UBERON:0000454!1.69e-14!9;UBERON:0000025!2.43e-14!194;UBERON:0002308!3.16e-14!9;UBERON:0000125!3.16e-14!9;UBERON:0004732!1.18e-13!13;UBERON:0004733!2.30e-12!12;UBERON:0002028!2.30e-12!12;UBERON:0007277!2.30e-12!12;UBERON:0009663!1.52e-11!7;UBERON:0000200!7.04e-11!6;UBERON:0000475!1.20e-10!365;UBERON:0001871!1.58e-10!7;UBERON:0000064!6.05e-10!219;UBERON:0002021!2.07e-09!5;UBERON:0000349!2.32e-09!5;UBERON:0004111!2.93e-09!241;UBERON:0002298!3.44e-09!8;UBERON:0001872!4.19e-09!5;UBERON:0002680!1.47e-08!9;UBERON:0001895!1.47e-08!9;UBERON:0010092!1.47e-08!9;UBERON:0000483!4.08e-08!309;UBERON:0000119!7.19e-08!312;UBERON:0000369!9.76e-08!4;UBERON:0002435!9.76e-08!4;UBERON:0000204!9.76e-08!4;UBERON:0010082!9.76e-08!4;UBERON:0000477!5.68e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.07e-69;32!UBERON:0003528;1.47e-66;34!UBERON:0002020;1.47e-66;34!UBERON:0002619;2.23e-65;22!UBERON:0002791;6.70e-65;32!UBERON:0001893;1.06e-62;34!UBERON:0001950;6.72e-59;20!UBERON:0002780;8.07e-59;41!UBERON:0001890;8.07e-59;41!UBERON:0000956;4.15e-57;25!UBERON:0000203;4.15e-57;25!UBERON:0000073;9.69e-57;53!UBERON:0002616;9.69e-57;53!UBERON:0000955;1.18e-40;68!UBERON:0001017;7.86e-39;75!UBERON:0001016;2.46e-32;83!UBERON:0004732;2.19e-22;13!UBERON:0002420;5.25e-22;9!UBERON:0007245;5.25e-22;9!UBERON:0010009;5.25e-22;9!UBERON:0010011;5.25e-22;9!UBERON:0000454;5.25e-22;9!UBERON:0000125;1.47e-21;9!UBERON:0002308;1.47e-21;9!UBERON:0000200;4.74e-20;6!UBERON:0004733;6.53e-20;12!UBERON:0002028;6.53e-20;12!UBERON:0002298;1.95e-17;6!UBERON:0002021;5.17e-17;5!UBERON:0000349;6.93e-17;5!UBERON:0001871;1.30e-16;6!UBERON:0001872;1.79e-16;5!UBERON:0009663;2.66e-16;7!UBERON:0007023;9.59e-15;114!UBERON:0000369;1.02e-13;4!UBERON:0002435;1.02e-13;4!UBERON:0000204;1.02e-13;4!UBERON:0002680;1.08e-12;9!UBERON:0001895;1.08e-12;9!UBERON:0011216;1.19e-11;132!UBERON:0001870;5.78e-11;3!UBERON:0001894;8.67e-11;7!UBERON:0005383;1.02e-10;3!UBERON:0005382;1.02e-10;3!UBERON:0000988;1.13e-09;3!UBERON:0001896;1.81e-09;3!UBERON:0005290;1.81e-09;3!UBERON:0010314;2.28e-08;132!UBERON:0001954;4.52e-08;2!UBERON:0003022;4.52e-08;2!UBERON:0002421;4.52e-08;2!UBERON:0002600;4.52e-08;2!UBERON:0002702;5.18e-08;2!UBERON:0002771;6.22e-08;2!UBERON:0001873;1.39e-07;2!UBERON:0001876;1.67e-07;2!UBERON:0000007;3.06e-07;2!UBERON:0001875;4.00e-07;2!UBERON:0006514;4.00e-07;2!UBERON:0002148;5.37e-07;2!UBERON:0006331;5.37e-07;2!UBERON:0009662;5.37e-07;2!UBERON:0001897;7.19e-07;2!UBERON:0010225;7.19e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.27e-105,56;UBERON:0005068,2.27e-105,56;UBERON:0006241,2.27e-105,56;UBERON:0007135,2.27e-105,56;UBERON:0000073,4.14e-102,53;UBERON:0002616,4.14e-102,53;UBERON:0001017,2.26e-90,81;UBERON:0000955,1.94e-88,68;UBERON:0006238,1.94e-88,68;UBERON:0001016,3.86e-87,89;UBERON:0002780,2.48e-82,41;UBERON:0001890,2.48e-82,41;UBERON:0003080,2.48e-82,41;UBERON:0006240,2.48e-82,41;UBERON:0001869,7.95e-78,32;UBERON:0003528,8.26e-78,34;UBERON:0002020,8.26e-78,34;UBERON:0001893,6.57e-73,34;UBERON:0002791,2.55e-72,32;UBERON:0003075,4.46e-72,82;UBERON:0007284,4.46e-72,82;UBERON:0002346,3.13e-68,86;UBERON:0002619,2.31e-65,22;UBERON:0001950,7.06e-59,20;UBERON:0000956,4.27e-57,25;UBERON:0000203,4.27e-57,25;UBERON:0003056,4.76e-56,61;UBERON:0010371,1.50e-54,104;UBERON:0007023,3.05e-49,114;UBERON:0010314,7.74e-43,132;UBERON:0004121,3.37e-40,171;UBERON:0000924,3.37e-40,171;UBERON:0006601,3.37e-40,171;UBERON:0011216,2.75e-32,223;UBERON:0000025,4.10e-23,192;UBERON:0003076,5.62e-23,15;UBERON:0003057,5.62e-23,15;UBERON:0004732,1.93e-22,13;UBERON:0002420,4.56e-22,9;UBERON:0007245,4.56e-22,9;UBERON:0010009,4.56e-22,9;UBERON:0010011,4.56e-22,9;UBERON:0000454,4.56e-22,9;UBERON:0000125,1.39e-21,9;UBERON:0002308,1.39e-21,9;UBERON:0004733,6.03e-20,12;UBERON:0002028,6.03e-20,12;UBERON:0007277,6.03e-20,12;UBERON:0000200,6.26e-20,6;UBERON:0002298,1.75e-17,6;UBERON:0002021,4.93e-17,5;UBERON:0000349,6.19e-17,5;UBERON:0001871,1.32e-16,6;UBERON:0001872,1.97e-16,5;UBERON:0009663,2.52e-16,7;UBERON:0004111,2.68e-16,240;UBERON:0000369,9.68e-14,4;UBERON:0002435,9.68e-14,4;UBERON:0000204,9.68e-14,4;UBERON:0010082,9.68e-14,4;UBERON:0002680,1.09e-12,9;UBERON:0001895,1.09e-12,9;UBERON:0010092,1.09e-12,9;UBERON:0000483,3.26e-11,306;UBERON:0000119,5.33e-11,309;UBERON:0001870,5.78e-11,3;UBERON:0001894,7.96e-11,7;UBERON:0006222,7.96e-11,7;UBERON:0005383,9.76e-11,3;UBERON:0005382,9.76e-11,3;UBERON:0000988,1.14e-09,3;UBERON:0001896,1.60e-09,3;UBERON:0005290,1.60e-09,3;UBERON:0010096,1.60e-09,3;UBERON:0001954,4.45e-08,2;UBERON:0003022,4.45e-08,2;UBERON:0002421,4.45e-08,2;UBERON:0002600,4.45e-08,2;UBERON:0002702,5.45e-08,2;UBERON:0002771,6.88e-08,2;UBERON:0001873,1.46e-07,2;UBERON:0010122,1.46e-07,2;UBERON:0001876,1.51e-07,2;UBERON:0000923,2.05e-07,560;UBERON:0010316,2.05e-07,560;UBERON:0005291,2.05e-07,560;UBERON:0006598,2.05e-07,560;UBERON:0010317,2.05e-07,560;UBERON:0002532,2.05e-07,560;UBERON:0002050,2.87e-07,564;UBERON:0000007,3.06e-07,2;UBERON:0001875,3.93e-07,2;UBERON:0006514,3.93e-07,2;UBERON:0002148,5.37e-07,2;UBERON:0006331,5.37e-07,2;UBERON:0009662,5.37e-07,2;UBERON:0001897,6.67e-07,2;UBERON:0010225,6.67e-07,2 | |||
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|short_description=p1@RIMS1 | |short_description=p1@RIMS1 | ||
}} | }} |
Latest revision as of 16:24, 19 September 2015
Short description: | p1@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RIMS1_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 0bp_to_ENST00000346609, ENST00000348717, ENST00000349908, ENST00000350827, ENST00000352008, NM_014989, uc003pga.2_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | E7EX08E7ENC2E7ERQ1E9PHR1C9JNW6B7Z2Q9Q3ZCW0Q86UR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data