FFCP PHASE1:Hg19::chrX:136648279..136648295,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7547 | |EntrezGene=7547 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12874 | |HGNC=12874 | ||
|TSSclassifier=strong | |||
|UniProt=O60481 | |UniProt=O60481 | ||
|association_with_transcript=-5bp_to_ENST00000287538_5end | |association_with_transcript=-5bp_to_ENST00000287538_5end | ||
|cluster_id=chrX:136648279..136648295,+ | |||
|coexpression_cluster_id=C232 | |coexpression_cluster_id=C232 | ||
|description=CAGE_peak_1_at_ZIC3_5end | |description=CAGE_peak_1_at_ZIC3_5end | ||
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|ontology_enrichment_celltype=CL:0000133!2.38e-10!59;CL:0002322!1.89e-09!5;CL:0000221!3.53e-08!71;CL:0002319!8.82e-08!25;CL:0000128!2.90e-07!7;CL:0000126!2.90e-07!7;CL:0000127!2.90e-07!7;CL:0002453!2.90e-07!7;CL:0000047!6.43e-07!8 | |ontology_enrichment_celltype=CL:0000133!2.38e-10!59;CL:0002322!1.89e-09!5;CL:0000221!3.53e-08!71;CL:0002319!8.82e-08!25;CL:0000128!2.90e-07!7;CL:0000126!2.90e-07!7;CL:0000127!2.90e-07!7;CL:0002453!2.90e-07!7;CL:0000047!6.43e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.81e-12;5!CL:0000039;3.81e-08;7!CL:0000586;3.81e-08;7!CL:0000064;1.14e-07;3!CL:0000067;1.14e-07;3!CL:0005012;1.14e-07;3!CL:0002304;1.14e-07;3!CL:0002603;1.25e-07;3!CL:0000346;5.14e-07;3!CL:1000428;5.14e-07;3!CL:0000708;6.01e-07;3!CL:0002321;6.10e-07;15 | |ontology_enrichment_celltype_v019=CL:0002322;2.81e-12;5!CL:0000039;3.81e-08;7!CL:0000586;3.81e-08;7!CL:0000064;1.14e-07;3!CL:0000067;1.14e-07;3!CL:0005012;1.14e-07;3!CL:0002304;1.14e-07;3!CL:0002603;1.25e-07;3!CL:0000346;5.14e-07;3!CL:1000428;5.14e-07;3!CL:0000708;6.01e-07;3!CL:0002321;6.10e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.76e-12,5;CL:0000133,1.50e-09,59;CL:0000039,4.23e-08,7;CL:0000586,4.23e-08,7;CL:0000064,1.16e-07,3;CL:0000067,1.16e-07,3;CL:0005012,1.16e-07,3;CL:0002304,1.16e-07,3;CL:0002603,1.30e-07,3;CL:0000346,4.89e-07,3;CL:1000428,4.89e-07,3;CL:0000708,5.20e-07,3;CL:0000047,5.58e-07,8;CL:0000221,5.64e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.41e-12;82!UBERON:0006215;4.30e-08;3!UBERON:0009117;8.67e-08;10!UBERON:0005564;8.67e-08;10 | |ontology_enrichment_development_v019=UBERON:0006601;3.41e-12;82!UBERON:0006215;4.30e-08;3!UBERON:0009117;8.67e-08;10!UBERON:0005564;8.67e-08;10 | ||
|ontology_enrichment_disease=DOID:3095!1.20e-08!22;DOID:2994!1.20e-08!22 | |ontology_enrichment_disease=DOID:3095!1.20e-08!22;DOID:2994!1.20e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.23e-10;22!DOID:2994;1.23e-10;22 | |ontology_enrichment_disease_v019=DOID:3095;1.23e-10;22!DOID:2994;1.23e-10;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.28e-10,22;DOID:2994,1.28e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.33e-63!82;UBERON:0000073!1.40e-62!94;UBERON:0001016!1.40e-62!94;UBERON:0005743!5.15e-62!86;UBERON:0001049!6.52e-59!57;UBERON:0005068!6.52e-59!57;UBERON:0006241!6.52e-59!57;UBERON:0007135!6.52e-59!57;UBERON:0003075!1.68e-56!86;UBERON:0007284!1.68e-56!86;UBERON:0002346!3.10e-55!90;UBERON:0002616!3.58e-54!59;UBERON:0000955!2.07e-51!69;UBERON:0006238!2.07e-51!69;UBERON:0004121!1.13e-46!169;UBERON:0000924!1.66e-46!173;UBERON:0006601!1.66e-46!173;UBERON:0002780!3.38e-39!41;UBERON:0001890!3.38e-39!41;UBERON:0006240!3.38e-39!41;UBERON:0003080!5.42e-38!42;UBERON:0003056!6.03e-38!61;UBERON:0000033!9.03e-36!123;UBERON:0002020!1.30e-33!34;UBERON:0003528!1.30e-33!34;UBERON:0001893!3.28e-33!34;UBERON:0000153!3.60e-33!129;UBERON:0007811!3.60e-33!129;UBERON:0002791!3.10e-32!33;UBERON:0001869!7.38e-31!32;UBERON:0000956!9.30e-23!25;UBERON:0000203!9.30e-23!25;UBERON:0003076!5.17e-22!15;UBERON:0003057!5.17e-22!15;UBERON:0007023!1.24e-20!115;UBERON:0002619!5.35e-20!22;UBERON:0001950!5.41e-20!20;UBERON:0004732!1.19e-19!13;UBERON:0004733!2.06e-18!12;UBERON:0002028!2.06e-18!12;UBERON:0007277!2.06e-18!12;UBERON:0002680!1.62e-14!9;UBERON:0001895!1.62e-14!9;UBERON:0010092!1.62e-14!9;UBERON:0002308!1.81e-12!9;UBERON:0000125!1.81e-12!9;UBERON:0002420!3.97e-12!9;UBERON:0007245!3.97e-12!9;UBERON:0010009!3.97e-12!9;UBERON:0010011!3.97e-12!9;UBERON:0000454!3.97e-12!9;UBERON:0002037!9.74e-11!6;UBERON:0006215!9.74e-11!6;UBERON:0000119!1.16e-10!312;UBERON:0000064!1.90e-10!219;UBERON:0009663!8.31e-10!7;UBERON:0000483!2.55e-09!309;UBERON:0002298!6.63e-09!8;UBERON:0000475!1.26e-08!365;UBERON:0000200!3.14e-08!6;UBERON:0001871!3.45e-08!7;UBERON:0000025!4.37e-08!194;UBERON:0000488!1.99e-07!4;UBERON:0001894!2.57e-07!7;UBERON:0006222!2.57e-07!7;UBERON:0002021!3.63e-07!5;UBERON:0000473!5.77e-07!8;UBERON:0007625!6.81e-07!11 | |ontology_enrichment_uberon=UBERON:0001017!1.33e-63!82;UBERON:0000073!1.40e-62!94;UBERON:0001016!1.40e-62!94;UBERON:0005743!5.15e-62!86;UBERON:0001049!6.52e-59!57;UBERON:0005068!6.52e-59!57;UBERON:0006241!6.52e-59!57;UBERON:0007135!6.52e-59!57;UBERON:0003075!1.68e-56!86;UBERON:0007284!1.68e-56!86;UBERON:0002346!3.10e-55!90;UBERON:0002616!3.58e-54!59;UBERON:0000955!2.07e-51!69;UBERON:0006238!2.07e-51!69;UBERON:0004121!1.13e-46!169;UBERON:0000924!1.66e-46!173;UBERON:0006601!1.66e-46!173;UBERON:0002780!3.38e-39!41;UBERON:0001890!3.38e-39!41;UBERON:0006240!3.38e-39!41;UBERON:0003080!5.42e-38!42;UBERON:0003056!6.03e-38!61;UBERON:0000033!9.03e-36!123;UBERON:0002020!1.30e-33!34;UBERON:0003528!1.30e-33!34;UBERON:0001893!3.28e-33!34;UBERON:0000153!3.60e-33!129;UBERON:0007811!3.60e-33!129;UBERON:0002791!3.10e-32!33;UBERON:0001869!7.38e-31!32;UBERON:0000956!9.30e-23!25;UBERON:0000203!9.30e-23!25;UBERON:0003076!5.17e-22!15;UBERON:0003057!5.17e-22!15;UBERON:0007023!1.24e-20!115;UBERON:0002619!5.35e-20!22;UBERON:0001950!5.41e-20!20;UBERON:0004732!1.19e-19!13;UBERON:0004733!2.06e-18!12;UBERON:0002028!2.06e-18!12;UBERON:0007277!2.06e-18!12;UBERON:0002680!1.62e-14!9;UBERON:0001895!1.62e-14!9;UBERON:0010092!1.62e-14!9;UBERON:0002308!1.81e-12!9;UBERON:0000125!1.81e-12!9;UBERON:0002420!3.97e-12!9;UBERON:0007245!3.97e-12!9;UBERON:0010009!3.97e-12!9;UBERON:0010011!3.97e-12!9;UBERON:0000454!3.97e-12!9;UBERON:0002037!9.74e-11!6;UBERON:0006215!9.74e-11!6;UBERON:0000119!1.16e-10!312;UBERON:0000064!1.90e-10!219;UBERON:0009663!8.31e-10!7;UBERON:0000483!2.55e-09!309;UBERON:0002298!6.63e-09!8;UBERON:0000475!1.26e-08!365;UBERON:0000200!3.14e-08!6;UBERON:0001871!3.45e-08!7;UBERON:0000025!4.37e-08!194;UBERON:0000488!1.99e-07!4;UBERON:0001894!2.57e-07!7;UBERON:0006222!2.57e-07!7;UBERON:0002021!3.63e-07!5;UBERON:0000473!5.77e-07!8;UBERON:0007625!6.81e-07!11 | ||
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| ||
|short_description=p1@ZIC3 | |short_description=p1@ZIC3 | ||
}} | }} |
Latest revision as of 15:47, 19 September 2015
Short description: | p1@ZIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZIC3_5end |
Coexpression cluster: | C232_teratocarcinoma_HES3GFP_H9_iPS_testicular_neuroblastoma_cerebellum |
Association with transcript: | -5bp_to_ENST00000287538_5end |
EntrezGene: | ZIC3 |
HGNC: | 12874 |
UniProt: | O60481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.76e-12 | 5 |
neurectodermal cell | 1.50e-09 | 59 |
germ line cell | 4.23e-08 | 7 |
germ cell | 4.23e-08 | 7 |
ciliated cell | 1.16e-07 | 3 |
ciliated epithelial cell | 1.16e-07 | 3 |
multi-ciliated epithelial cell | 1.16e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.16e-07 | 3 |
astrocyte of the cerebellum | 1.30e-07 | 3 |
hair follicle dermal papilla cell | 4.89e-07 | 3 |
stem cell of epidermis | 4.89e-07 | 3 |
leptomeningeal cell | 5.20e-07 | 3 |
neuronal stem cell | 5.58e-07 | 8 |
ectodermal cell | 5.64e-07 | 72 |
Ontology term | p-value | n |
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