FFCP PHASE1:Hg19::chr19:51472014..51472030,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:51472014..51472030,-
|short_description=p2@KLK6
|description=CAGE_peak_2_at_KLK6_5end
|association_with_transcript=16bp_to_ENST00000376851,ENST00000391808...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5653 | |EntrezGene=5653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6367 | |HGNC=6367 | ||
|TSSclassifier=strong | |||
|UniProt=Q92876 | |UniProt=Q92876 | ||
|association_with_transcript=16bp_to_ENST00000376851,ENST00000391808,NM_001012964,NM_001012965,uc002pui.2,uc002puj.2,uc010ycn.1_5end | |||
|cluster_id=chr19:51472014..51472030,- | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_2_at_KLK6_5end | |||
|id=chr19:51472014..51472030,- | |||
|ontology_enrichment_celltype=CL:0000066!1.11e-34!254;CL:0002076!2.13e-25!43;CL:0000223!3.81e-22!59;CL:0002251!8.39e-13!21;CL:0000076!1.43e-11!62;CL:0002368!3.10e-11!13;CL:1000507!4.48e-10!12;CL:1000494!4.48e-10!12;CL:1000449!2.30e-08!16;CL:1000497!2.43e-08!18;CL:0002518!2.43e-08!18;CL:0002202!7.71e-08!9;CL:0002632!7.71e-08!9;CL:0000622!5.11e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.25e-18;42!CL:1000507;4.83e-14;10!CL:1000494;4.83e-14;10!CL:0002251;3.12e-12;20!CL:1000449;6.50e-11;15!CL:0002368;1.57e-10;13!CL:0000622;1.77e-10;5!CL:1000497;2.20e-09;17!CL:0002518;2.20e-09;17!CL:0000154;1.18e-08;6!CL:0000239;5.68e-08;3!CL:1000615;5.68e-08;3!CL:0002306;5.68e-08;3!CL:0000150;6.48e-08;9!CL:0002202;1.56e-07;9!CL:0002632;1.56e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-26,253;CL:0002076,4.43e-25,42;CL:0000223,1.50e-24,58;CL:1000507,4.93e-14,10;CL:1000494,4.93e-14,10;CL:0002251,3.03e-12,20;CL:1000449,6.47e-11,15;CL:0002368,1.58e-10,13;CL:0000622,1.70e-10,5;CL:1000497,2.19e-09,17;CL:0002518,2.19e-09,17;CL:0000154,1.15e-08,6;CL:0000239,5.75e-08,3;CL:1000615,5.75e-08,3;CL:0002306,5.75e-08,3;CL:0000150,6.36e-08,9;CL:0002202,1.73e-07,9;CL:0002632,1.73e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.40e-12;58 | |||
|ontology_enrichment_disease=DOID:1749!2.56e-13!14;DOID:305!4.98e-13!106;DOID:0050687!3.95e-09!143;DOID:299!1.28e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.75e-12;25!DOID:1749;5.35e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.90e-14,106;DOID:299,5.85e-12,25;DOID:0050687,5.05e-09,143;DOID:1749,5.06e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000464!1.60e-15!104;UBERON:0000466!8.68e-15!126;UBERON:0004119!4.69e-12!169;UBERON:0000925!4.69e-12!169;UBERON:0006595!4.69e-12!169;UBERON:0001004!5.18e-12!72;UBERON:0005177!2.87e-11!107;UBERON:0002553!4.05e-11!70;UBERON:0001007!7.36e-11!155;UBERON:0001555!7.36e-11!155;UBERON:0007026!7.36e-11!155;UBERON:0000058!1.24e-10!26;UBERON:0000166!1.42e-10!21;UBERON:0000161!2.94e-10!35;UBERON:0000077!4.33e-10!130;UBERON:0009773!4.48e-10!12;UBERON:0001231!4.48e-10!12;UBERON:0004810!4.48e-10!12;UBERON:0009569!2.55e-09!113;UBERON:0004921!3.81e-09!129;UBERON:0004185!3.81e-09!129;UBERON:0006555!5.11e-09!17;UBERON:0005103!5.11e-09!17;UBERON:0000083!5.11e-09!17;UBERON:0009201!5.11e-09!17;UBERON:0004819!5.11e-09!17;UBERON:0006553!5.11e-09!17;UBERON:0003074!5.11e-09!17;UBERON:0003060!5.11e-09!17;UBERON:0003887!5.14e-09!21;UBERON:0000064!9.05e-09!219;UBERON:0003886!1.13e-08!63;UBERON:0001041!1.82e-08!98;UBERON:0003064!2.01e-08!37;UBERON:0004211!2.30e-08!16;UBERON:0001285!2.30e-08!16;UBERON:0007684!2.30e-08!16;UBERON:0003220!2.30e-08!16;UBERON:0004208!2.30e-08!16;UBERON:0004876!2.36e-08!20;UBERON:0000080!2.55e-08!18;UBERON:0002120!2.55e-08!18;UBERON:0004875!2.55e-08!18;UBERON:0005721!2.55e-08!18;UBERON:0005754!2.55e-08!18;UBERON:0007297!2.55e-08!18;UBERON:0000489!3.48e-08!32;UBERON:0000344!4.17e-08!12;UBERON:0006554!6.93e-08!44;UBERON:0000165!1.03e-07!28;UBERON:0000930!1.03e-07!28;UBERON:0001008!1.42e-07!45;UBERON:0002113!2.23e-07!27;UBERON:0003918!2.23e-07!27;UBERON:0005095!2.23e-07!27;UBERON:0007687!2.23e-07!27;UBERON:0000065!4.59e-07!53;UBERON:0005172!7.94e-07!55;UBERON:0005173!7.94e-07!55;UBERON:0005911!8.45e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.83e-14;10!UBERON:0009773;4.83e-14;10!UBERON:0001231;4.83e-14;10!UBERON:0004810;4.83e-14;10!UBERON:0000161;1.20e-12;19!UBERON:0000166;1.20e-12;19!UBERON:0000165;5.05e-11;28!UBERON:0006555;6.50e-11;15!UBERON:0004819;6.50e-11;15!UBERON:0001285;6.50e-11;15!UBERON:0007684;6.50e-11;15!UBERON:0002294;3.18e-10;7!UBERON:0001173;3.18e-10;7!UBERON:0002113;5.47e-09;24!UBERON:0011143;5.47e-09;24!UBERON:0000353;3.10e-08;15!UBERON:0001041;3.23e-08;14!UBERON:0001044;4.67e-08;6!UBERON:0003293;4.67e-08;6!UBERON:0003294;4.67e-08;6!UBERON:0010047;4.67e-08;6!UBERON:0003408;4.67e-08;6!UBERON:0000167;4.67e-08;6!UBERON:0006853;5.68e-08;3!UBERON:0007685;5.68e-08;3!UBERON:0004134;5.68e-08;3!UBERON:0006554;7.22e-08;30!UBERON:0001008;7.22e-08;30!UBERON:0001723;8.47e-08;3!UBERON:0001033;8.47e-08;3!UBERON:0004807;1.37e-07;22!UBERON:0005911;3.50e-07;36!UBERON:0000489;5.42e-07;29!UBERON:0002110;5.81e-07;3!UBERON:0000344;8.98e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,4.96e-15,22;UBERON:0001004,6.37e-15,74;UBERON:0004810,4.93e-14,10;UBERON:0004119,8.50e-14,160;UBERON:0000925,8.50e-14,160;UBERON:0006595,8.50e-14,160;UBERON:0005177,1.73e-13,101;UBERON:0002294,2.58e-13,9;UBERON:0001173,2.58e-13,9;UBERON:0004912,2.58e-13,9;UBERON:0001007,6.06e-13,145;UBERON:0001555,6.06e-13,145;UBERON:0007026,6.06e-13,145;UBERON:0001041,6.58e-13,87;UBERON:0000161,4.87e-12,36;UBERON:0009569,5.29e-12,112;UBERON:0004211,6.47e-11,15;UBERON:0009773,6.47e-11,15;UBERON:0001231,6.47e-11,15;UBERON:0001285,6.47e-11,15;UBERON:0007684,6.47e-11,15;UBERON:0004208,6.47e-11,15;UBERON:0000165,1.54e-10,29;UBERON:0000930,1.54e-10,29;UBERON:0004921,1.97e-10,118;UBERON:0006555,4.21e-10,16;UBERON:0004819,4.21e-10,16;UBERON:0005172,3.75e-09,54;UBERON:0005173,3.75e-09,54;UBERON:0005911,1.58e-08,82;UBERON:0000353,3.10e-08,15;UBERON:0002394,4.08e-08,6;UBERON:0003928,4.08e-08,6;UBERON:0002113,4.22e-08,26;UBERON:0003918,4.22e-08,26;UBERON:0011143,4.22e-08,26;UBERON:0005095,4.22e-08,26;UBERON:0007687,4.22e-08,26;UBERON:0001044,4.64e-08,6;UBERON:0003293,4.64e-08,6;UBERON:0003294,4.64e-08,6;UBERON:0010047,4.64e-08,6;UBERON:0000167,4.64e-08,6;UBERON:0006853,5.75e-08,3;UBERON:0007685,5.75e-08,3;UBERON:0004134,5.75e-08,3;UBERON:0000065,7.10e-08,54;UBERON:0001444,8.34e-08,49;UBERON:0001723,8.38e-08,3;UBERON:0001033,8.38e-08,3;UBERON:0010056,8.38e-08,3;UBERON:0002417,9.21e-08,60;UBERON:0000916,9.21e-08,60;UBERON:0002100,4.06e-07,199;UBERON:0002110,5.04e-07,3;UBERON:0006242,5.04e-07,3;UBERON:0000153,5.58e-07,62;UBERON:0007811,5.58e-07,62;UBERON:0000344,8.88e-07,20 | |||
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| ||
|short_description=p2@KLK6 | |||
}} | }} |
Latest revision as of 13:30, 19 September 2015
Short description: | p2@KLK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLK6_5end |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | 16bp_to_ENST00000376851, ENST00000391808, NM_001012964, NM_001012965, uc002pui.2, uc002puj.2, uc010ycn.1_5end |
EntrezGene: | KLK6 |
HGNC: | 6367 |
UniProt: | Q92876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.33e-26 | 253 |
endo-epithelial cell | 4.43e-25 | 42 |
endodermal cell | 1.50e-24 | 58 |
kidney tubule cell | 4.93e-14 | 10 |
nephron tubule epithelial cell | 4.93e-14 | 10 |
epithelial cell of alimentary canal | 3.03e-12 | 20 |
epithelial cell of nephron | 6.47e-11 | 15 |
respiratory epithelial cell | 1.58e-10 | 13 |
acinar cell | 1.70e-10 | 5 |
kidney cell | 2.19e-09 | 17 |
kidney epithelial cell | 2.19e-09 | 17 |
protein secreting cell | 1.15e-08 | 6 |
brush border epithelial cell | 5.75e-08 | 3 |
kidney cortex tubule cell | 5.75e-08 | 3 |
epithelial cell of proximal tubule | 5.75e-08 | 3 |
glandular epithelial cell | 6.36e-08 | 9 |
epithelial cell of tracheobronchial tree | 1.73e-07 | 9 |
epithelial cell of lower respiratory tract | 1.73e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.90e-14 | 106 |
adenocarcinoma | 5.85e-12 | 25 |
cell type cancer | 5.05e-09 | 143 |
squamous cell carcinoma | 5.06e-08 | 14 |