FFCP PHASE1:Hg19::chr2:201242715..201242739,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26010 | |EntrezGene=26010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |HGNC=24574 | ||
|TSSclassifier=strong | |||
|UniProt=C9JKE4 | |UniProt=C9JKE4 | ||
|association_with_transcript=0bp_to_ENST00000421573_5end | |association_with_transcript=0bp_to_ENST00000421573_5end | ||
|cluster_id=chr2:201242715..201242739,+ | |||
|coexpression_cluster_id=C1048 | |||
|description=CAGE_peak_12_at_SPATS2L_5end | |description=CAGE_peak_12_at_SPATS2L_5end | ||
|id=chr2:201242715..201242739,+ | |id=chr2:201242715..201242739,+ | ||
|ontology_enrichment_celltype=CL:0000322!1.31e-08!3;CL:0000066!3.96e-08!254 | |ontology_enrichment_celltype=CL:0000322!1.31e-08!3;CL:0000066!3.96e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002379;1.83e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.76e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.06e-09;1!UBERON:0008801;1.83e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.87e-17!106;DOID:0050687!9.70e-16!143;DOID:162!1.68e-12!235;DOID:14566!5.37e-12!239;DOID:1749!1.14e-07!14;DOID:4929!8.30e-07!2;DOID:3493!9.26e-07!2 | |ontology_enrichment_disease=DOID:305!1.87e-17!106;DOID:0050687!9.70e-16!143;DOID:162!1.68e-12!235;DOID:14566!5.37e-12!239;DOID:1749!1.14e-07!14;DOID:4929!8.30e-07!2;DOID:3493!9.26e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.09e-17;2!DOID:299;1.48e-11;25!DOID:3620;1.83e-09;1!DOID:3565;1.83e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,8.08e-18,2;DOID:299,1.40e-11,25;DOID:3620,1.76e-09,1;DOID:3565,1.76e-09,1;DOID:305,1.26e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.15e-14!35;UBERON:0002294!1.75e-13!7;UBERON:0001173!1.75e-13!7;UBERON:0004912!1.75e-13!7;UBERON:0004921!2.04e-13!129;UBERON:0004185!2.04e-13!129;UBERON:0001007!2.59e-13!155;UBERON:0001555!2.59e-13!155;UBERON:0007026!2.59e-13!155;UBERON:0004119!2.90e-12!169;UBERON:0000925!2.90e-12!169;UBERON:0006595!2.90e-12!169;UBERON:0000160!6.02e-12!27;UBERON:0000077!3.82e-09!130;UBERON:0004821!1.31e-08!3;UBERON:0003215!1.31e-08!3;UBERON:0002299!1.31e-08!3;UBERON:0006524!1.31e-08!3;UBERON:0008874!1.31e-08!3;UBERON:0002169!1.31e-08!3;UBERON:0004894!1.31e-08!3;UBERON:0002110!1.65e-08!3;UBERON:0006242!1.65e-08!3;UBERON:0009856!3.63e-08!26;UBERON:0005177!2.07e-07!107;UBERON:0007499!6.95e-07!25;UBERON:0002394!7.30e-07!4;UBERON:0003928!7.30e-07!4;UBERON:0009497!7.46e-07!25;UBERON:0000015!7.46e-07!25;UBERON:0002423!7.46e-07!25;UBERON:0006235!7.46e-07!25;UBERON:0004161!7.46e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.04e-36;17!UBERON:0005409;5.36e-35;22!UBERON:0002108;7.64e-28;4!UBERON:0004921;4.69e-24;33!UBERON:0002294;3.59e-19;7!UBERON:0001173;3.59e-19;7!UBERON:0000059;1.74e-12;11!UBERON:0002114;1.81e-12;2!UBERON:0002110;6.06e-12;3!UBERON:0004913;5.79e-10;1!UBERON:0003703;5.79e-10;1!UBERON:0001174;5.79e-10;1!UBERON:0004914;5.79e-10;1!UBERON:0001831;1.83e-09;1!UBERON:0001567;1.83e-09;1!UBERON:0002394;2.62e-09;4!UBERON:0003928;2.62e-09;4!UBERON:0001155;5.30e-09;9!UBERON:0001555;2.54e-08;54!UBERON:0001007;2.63e-08;81!UBERON:0002423;3.63e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.90e-37,17;UBERON:0005409,6.71e-31,25;UBERON:0002108,7.91e-28,4;UBERON:0002294,6.65e-15,9;UBERON:0001173,6.65e-15,9;UBERON:0004912,6.65e-15,9;UBERON:0000059,1.52e-12,11;UBERON:0002114,1.81e-12,2;UBERON:0002110,5.90e-12,3;UBERON:0006242,5.90e-12,3;UBERON:0001007,8.40e-12,145;UBERON:0001555,8.40e-12,145;UBERON:0007026,8.40e-12,145;UBERON:0004921,2.66e-11,118;UBERON:0004119,1.95e-10,160;UBERON:0000925,1.95e-10,160;UBERON:0006595,1.95e-10,160;UBERON:0004913,5.79e-10,1;UBERON:0003703,5.79e-10,1;UBERON:0001174,5.79e-10,1;UBERON:0004914,5.79e-10,1;UBERON:0001831,2.46e-09,1;UBERON:0001567,2.46e-09,1;UBERON:0008801,2.46e-09,1;UBERON:0001155,4.68e-09,9;UBERON:0009497,3.86e-08,25;UBERON:0000015,3.86e-08,25;UBERON:0002423,3.86e-08,25;UBERON:0006235,3.86e-08,25;UBERON:0004161,3.86e-08,25 | |||
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| ||
|short_description=p12@SPATS2L | |short_description=p12@SPATS2L | ||
}} | }} |
Latest revision as of 10:20, 19 September 2015
Short description: | p12@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPATS2L_5end |
Coexpression cluster: | C1048_signet_small_colon_duodenum_temporal_trachea_gall |
Association with transcript: | 0bp_to_ENST00000421573_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | C9JKE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.76e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.90e-37 | 17 |
gastrointestinal system | 6.71e-31 | 25 |
small intestine | 7.91e-28 | 4 |
biliary system | 6.65e-15 | 9 |
biliary tree | 6.65e-15 | 9 |
biliary bud | 6.65e-15 | 9 |
large intestine | 1.52e-12 | 11 |
duodenum | 1.81e-12 | 2 |
gallbladder | 5.90e-12 | 3 |
gall bladder primordium | 5.90e-12 | 3 |
digestive system | 8.40e-12 | 145 |
digestive tract | 8.40e-12 | 145 |
primitive gut | 8.40e-12 | 145 |
subdivision of digestive tract | 2.66e-11 | 118 |
endoderm-derived structure | 1.95e-10 | 160 |
endoderm | 1.95e-10 | 160 |
presumptive endoderm | 1.95e-10 | 160 |
hepatopancreatic ampulla | 5.79e-10 | 1 |
extrahepatic bile duct | 5.79e-10 | 1 |
common bile duct | 5.79e-10 | 1 |
duodenal papilla | 5.79e-10 | 1 |
parotid gland | 2.46e-09 | 1 |
cheek | 2.46e-09 | 1 |
parotid gland primordium | 2.46e-09 | 1 |
colon | 4.68e-09 | 9 |
epithelium of foregut-midgut junction | 3.86e-08 | 25 |
anatomical boundary | 3.86e-08 | 25 |
hepatobiliary system | 3.86e-08 | 25 |
foregut-midgut junction | 3.86e-08 | 25 |
septum transversum | 3.86e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 8.08e-18 | 2 |
adenocarcinoma | 1.40e-11 | 25 |
central nervous system cancer | 1.76e-09 | 1 |
meningioma | 1.76e-09 | 1 |
carcinoma | 1.26e-07 | 106 |