FFCP PHASE1:Hg19::chr5:96478222..96478262,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=167410 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18581 | |||
|TSSclassifier=strong | |||
|UniProt=D6RID5 | |||
|association_with_transcript=194bp_to_ENST00000512378_5end | |||
|cluster_id=chr5:96478222..96478262,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_LIX1_5end | |||
|id=chr5:96478222..96478262,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.53e-24;82!UBERON:0006241;5.31e-12;3!UBERON:0003057;5.31e-12;3!UBERON:0006215;3.98e-11;3!UBERON:0010122;1.93e-09;2!UBERON:0007297;7.56e-08;2!UBERON:0002532;1.91e-07;206!UBERON:0010316;1.91e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.76e-85!57;UBERON:0005068!7.76e-85!57;UBERON:0006241!7.76e-85!57;UBERON:0007135!7.76e-85!57;UBERON:0007023!7.63e-71!115;UBERON:0002616!2.63e-70!59;UBERON:0001017!1.54e-68!82;UBERON:0005743!1.64e-67!86;UBERON:0000955!6.65e-67!69;UBERON:0006238!6.65e-67!69;UBERON:0002780!1.72e-64!41;UBERON:0001890!1.72e-64!41;UBERON:0006240!1.72e-64!41;UBERON:0003080!9.57e-63!42;UBERON:0003075!3.23e-62!86;UBERON:0007284!3.23e-62!86;UBERON:0000073!6.93e-60!94;UBERON:0001016!6.93e-60!94;UBERON:0002346!7.41e-59!90;UBERON:0001893!6.93e-57!34;UBERON:0002020!1.68e-56!34;UBERON:0003528!1.68e-56!34;UBERON:0002791!1.47e-54!33;UBERON:0001869!2.75e-52!32;UBERON:0003056!2.32e-45!61;UBERON:0000033!1.78e-37!123;UBERON:0002619!2.29e-37!22;UBERON:0000956!9.46e-36!25;UBERON:0000203!9.46e-36!25;UBERON:0000153!3.98e-35!129;UBERON:0007811!3.98e-35!129;UBERON:0001950!2.03e-32!20;UBERON:0004121!9.51e-29!169;UBERON:0000924!9.09e-28!173;UBERON:0006601!9.09e-28!173;UBERON:0002420!1.83e-23!9;UBERON:0007245!1.83e-23!9;UBERON:0010009!1.83e-23!9;UBERON:0010011!1.83e-23!9;UBERON:0000454!1.83e-23!9;UBERON:0002308!7.65e-23!9;UBERON:0000125!7.65e-23!9;UBERON:0003076!5.17e-22!15;UBERON:0003057!5.17e-22!15;UBERON:0000025!4.21e-20!194;UBERON:0009663!1.89e-18!7;UBERON:0004111!3.21e-16!241;UBERON:0004733!1.26e-15!12;UBERON:0002028!1.26e-15!12;UBERON:0007277!1.26e-15!12;UBERON:0000200!2.52e-15!6;UBERON:0002298!6.07e-15!8;UBERON:0004732!2.81e-14!13;UBERON:0000349!3.60e-14!5;UBERON:0000477!8.45e-14!286;UBERON:0000475!1.92e-13!365;UBERON:0000483!4.60e-13!309;UBERON:0000119!8.44e-13!312;UBERON:0000064!2.93e-12!219;UBERON:0001871!1.37e-11!7;UBERON:0000369!1.49e-11!4;UBERON:0002435!1.49e-11!4;UBERON:0000204!1.49e-11!4;UBERON:0010082!1.49e-11!4;UBERON:0000062!1.59e-11!511;UBERON:0002680!2.07e-09!9;UBERON:0001895!2.07e-09!9;UBERON:0010092!2.07e-09!9;UBERON:0005383!2.93e-09!3;UBERON:0005382!2.93e-09!3;UBERON:0001894!5.12e-09!7;UBERON:0006222!5.12e-09!7;UBERON:0002021!8.20e-09!5;UBERON:0001872!9.63e-09!5;UBERON:0001896!1.11e-08!3;UBERON:0005290!1.11e-08!3;UBERON:0010096!1.11e-08!3;UBERON:0002240!1.75e-08!3;UBERON:0002771!1.84e-08!3;UBERON:0000988!3.19e-08!3;UBERON:0006331!3.98e-08!3;UBERON:0000481!6.50e-08!347;UBERON:0006947!6.81e-08!3;UBERON:0004054!6.81e-08!3;UBERON:0000922!9.89e-08!612;UBERON:0001873!7.73e-07!2;UBERON:0001954!7.73e-07!2;UBERON:0003022!7.73e-07!2;UBERON:0002421!7.73e-07!2;UBERON:0002600!7.73e-07!2;UBERON:0010122!7.73e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.22e-68;34!UBERON:0003528;1.71e-66;34!UBERON:0002020;1.71e-66;34!UBERON:0001869;3.25e-65;32!UBERON:0002791;5.46e-65;32!UBERON:0002780;6.76e-61;41!UBERON:0001890;6.76e-61;41!UBERON:0000073;1.37e-59;53!UBERON:0002616;1.37e-59;53!UBERON:0002619;7.71e-56;22!UBERON:0000956;7.89e-49;25!UBERON:0000203;7.89e-49;25!UBERON:0001950;2.09e-48;20!UBERON:0001017;1.89e-42;75!UBERON:0000955;6.15e-42;68!UBERON:0002420;2.98e-34;9!UBERON:0007245;2.98e-34;9!UBERON:0010009;2.98e-34;9!UBERON:0010011;2.98e-34;9!UBERON:0000454;2.98e-34;9!UBERON:0000125;2.31e-33;9!UBERON:0002308;2.31e-33;9!UBERON:0001016;2.73e-32;83!UBERON:0009663;9.21e-27;7!UBERON:0004733;4.32e-23;12!UBERON:0002028;4.32e-23;12!UBERON:0000200;4.42e-22;6!UBERON:0002298;6.19e-22;6!UBERON:0004732;3.44e-21;13!UBERON:0007023;8.11e-21;114!UBERON:0000349;2.28e-20;5!UBERON:0000369;1.81e-16;4!UBERON:0002435;1.81e-16;4!UBERON:0000204;1.81e-16;4!UBERON:0011216;7.34e-14;132!UBERON:0002680;9.46e-14;9!UBERON:0001895;9.46e-14;9!UBERON:0001871;1.12e-13;6!UBERON:0005383;5.03e-13;3!UBERON:0005382;5.03e-13;3!UBERON:0002021;1.59e-12;5!UBERON:0001872;1.71e-12;5!UBERON:0001896;3.63e-12;3!UBERON:0005290;3.63e-12;3!UBERON:0002240;5.31e-12;3!UBERON:0005174;5.31e-12;3!UBERON:0001137;5.31e-12;3!UBERON:0001870;6.29e-12;3!UBERON:0000988;1.63e-11;3!UBERON:0006947;4.77e-11;3!UBERON:0004054;4.77e-11;3!UBERON:0001873;1.93e-09;2!UBERON:0001954;1.97e-09;2!UBERON:0003022;1.97e-09;2!UBERON:0002421;1.97e-09;2!UBERON:0002600;1.97e-09;2!UBERON:0001876;3.24e-09;2!UBERON:0010314;4.24e-09;132!UBERON:0001875;5.52e-09;2!UBERON:0006514;5.52e-09;2!UBERON:0002784;5.60e-09;4!UBERON:0001894;6.02e-09;7!UBERON:0001897;9.52e-09;2!UBERON:0010225;9.52e-09;2!UBERON:0002771;2.00e-08;2!UBERON:0005904;2.09e-08;4!UBERON:0002148;2.55e-08;2!UBERON:0006331;2.55e-08;2!UBERON:0009662;2.55e-08;2!UBERON:0002702;3.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.83e-120,56;UBERON:0005068,1.83e-120,56;UBERON:0006241,1.83e-120,56;UBERON:0007135,1.83e-120,56;UBERON:0000073,4.32e-110,53;UBERON:0002616,4.32e-110,53;UBERON:0000955,2.13e-96,68;UBERON:0006238,2.13e-96,68;UBERON:0001017,2.77e-96,81;UBERON:0002780,7.27e-87,41;UBERON:0001890,7.27e-87,41;UBERON:0003080,7.27e-87,41;UBERON:0006240,7.27e-87,41;UBERON:0001016,7.05e-86,89;UBERON:0001893,3.39e-80,34;UBERON:0003075,1.14e-79,82;UBERON:0007284,1.14e-79,82;UBERON:0003528,1.23e-79,34;UBERON:0002020,1.23e-79,34;UBERON:0002346,1.48e-75,86;UBERON:0001869,2.31e-73,32;UBERON:0002791,5.07e-73,32;UBERON:0007023,2.05e-70,114;UBERON:0010371,6.43e-61,104;UBERON:0003056,3.08e-56,61;UBERON:0002619,6.30e-56,22;UBERON:0000956,6.61e-49,25;UBERON:0000203,6.61e-49,25;UBERON:0010314,1.33e-48,132;UBERON:0001950,1.75e-48,20;UBERON:0004121,1.32e-40,171;UBERON:0000924,1.32e-40,171;UBERON:0006601,1.32e-40,171;UBERON:0002420,2.82e-34,9;UBERON:0007245,2.82e-34,9;UBERON:0010009,2.82e-34,9;UBERON:0010011,2.82e-34,9;UBERON:0000454,2.82e-34,9;UBERON:0000125,2.40e-33,9;UBERON:0002308,2.40e-33,9;UBERON:0003076,1.14e-32,15;UBERON:0003057,1.14e-32,15;UBERON:0011216,6.04e-32,223;UBERON:0000025,3.32e-30,192;UBERON:0009663,9.05e-27,7;UBERON:0004111,8.16e-25,240;UBERON:0004733,4.51e-23,12;UBERON:0002028,4.51e-23,12;UBERON:0007277,4.51e-23,12;UBERON:0000200,4.27e-22,6;UBERON:0002298,6.19e-22,6;UBERON:0004732,3.58e-21,13;UBERON:0000349,2.28e-20,5;UBERON:0000369,1.84e-16,4;UBERON:0002435,1.84e-16,4;UBERON:0000204,1.84e-16,4;UBERON:0010082,1.84e-16,4;UBERON:0000483,2.92e-16,306;UBERON:0000119,5.27e-16,309;UBERON:0002680,1.00e-13,9;UBERON:0001895,1.00e-13,9;UBERON:0010092,1.00e-13,9;UBERON:0001871,1.09e-13,6;UBERON:0005383,4.83e-13,3;UBERON:0005382,4.83e-13,3;UBERON:0002021,1.43e-12,5;UBERON:0001872,1.82e-12,5;UBERON:0001896,3.50e-12,3;UBERON:0005290,3.50e-12,3;UBERON:0010096,3.50e-12,3;UBERON:0001870,6.17e-12,3;UBERON:0002240,6.91e-12,3;UBERON:0005174,6.91e-12,3;UBERON:0001137,6.91e-12,3;UBERON:0000988,1.69e-11,3;UBERON:0006947,5.22e-11,3;UBERON:0004054,5.22e-11,3;UBERON:0001873,1.93e-09,2;UBERON:0001954,1.93e-09,2;UBERON:0003022,1.93e-09,2;UBERON:0002421,1.93e-09,2;UBERON:0002600,1.93e-09,2;UBERON:0010122,1.93e-09,2;UBERON:0001876,3.12e-09,2;UBERON:0001875,5.01e-09,2;UBERON:0006514,5.01e-09,2;UBERON:0002784,6.09e-09,4;UBERON:0001894,6.42e-09,7;UBERON:0006222,6.42e-09,7;UBERON:0001897,9.34e-09,2;UBERON:0010225,9.34e-09,2;UBERON:0002771,2.16e-08,2;UBERON:0005904,2.24e-08,4;UBERON:0000923,2.46e-08,560;UBERON:0010316,2.46e-08,560;UBERON:0005291,2.46e-08,560;UBERON:0006598,2.46e-08,560;UBERON:0010317,2.46e-08,560;UBERON:0002532,2.46e-08,560;UBERON:0002148,2.70e-08,2;UBERON:0006331,2.70e-08,2;UBERON:0009662,2.70e-08,2;UBERON:0002702,2.91e-08,2;UBERON:0002050,3.38e-08,564;UBERON:0000922,5.92e-08,592;UBERON:0005423,1.23e-07,581 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.829288440122964,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94732882989668,8.8621732338623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,8.81296932537587,1.99613798001194,0,0,0,0,0,0,0,0,0,15.9433449446491,12.0596438625408,3.05163472634166,1.54810963903714,1.47773809476774,4.8264787373874,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59666367690509,0,0.0884575645033392,0,0,0,0,11.4581926067151,0.802577647298789,10.3076356119149,0,0,0,2.36750641709634,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,2.48578814858586,0,0,7.15411994301429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20504346451747,6.98217432349165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9284453471395,17.8426462006164,0,0,0,0,0,4.9207140893,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61992277812342,4.23144325576608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,3.41673541725497,5.50840095108599,6.88091034828085,2.3295100822739,7.57576115884878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25382057376577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33102568300614,2.8339315265117,6.38535436228605,6.56372365570416,0,6.98488249888601,9.20411180101551,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,5.60561952332676,3.12431239445539,6.40729069153671,4.81960157473692,0,0,0,0,0,0,1.00885116665647,0,0.227662191351298,0.0887023701626388,0,0,2.58284985311961,7.2350050919134,0,0,0.706437835654626,6.59885477647208,0,0,0,0,0.714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,1.69354820076372,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,6.0855624805633,4.45569600490629,4.6492130034174,0,0,0,0,0,0,0,0,0,1.29005624836306,0,4.89538729374586,0,0,0,0,0,0.756998549010474,0.874124575709564,0,0,0,0,0,0.0757786982182394,0,5.80418607621146,6.4128457434375,0,0,0,0,0,0.190941474834495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@LIX1 | |||
}} |
Latest revision as of 10:01, 19 September 2015
Short description: | p3@LIX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIX1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 194bp_to_ENST00000512378_5end |
EntrezGene: | LIX1 |
HGNC: | 18581 |
UniProt: | D6RID5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data