FFCP PHASE1:Hg19::chr11:65061588..65061622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23649 | |EntrezGene=23649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30073 | |HGNC=30073 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000534785_5end | |association_with_transcript=-26bp_to_ENST00000534785_5end | ||
|cluster_id=chr11:65061588..65061622,+ | |||
|description=CAGE_peak_4_at_POLA2_5end | |description=CAGE_peak_4_at_POLA2_5end | ||
|id=chr11:65061588..65061622,+ | |id=chr11:65061588..65061622,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.22e-10!9 | |ontology_enrichment_celltype=CL:0000188!1.22e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;7.12e-26;9!CL:0002504;3.32e-14;3!CL:1000279;3.32e-14;3!CL:1000280;3.32e-14;3!CL:0002195;2.39e-10;2!CL:0002571;2.39e-10;2!CL:0000187;6.03e-08;55!CL:0000594;1.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,4.19e-26,9;CL:0002504,2.83e-14,3;CL:1000279,2.83e-14,3;CL:1000280,2.83e-14,3;CL:0002195,2.08e-10,2;CL:0002571,2.08e-10,2;CL:0000187,5.10e-10,55;CL:0000680,2.24e-09,58;CL:0000056,2.24e-09,58;CL:0000355,2.24e-09,58;CL:0000393,8.51e-09,61;CL:0000211,8.51e-09,61;CL:0000594,1.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000355;8.53e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.68e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.49e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-33!115;UBERON:0002020!1.37e-14!34;UBERON:0003528!1.37e-14!34;UBERON:0001893!1.83e-14!34;UBERON:0001049!2.31e-14!57;UBERON:0005068!2.31e-14!57;UBERON:0006241!2.31e-14!57;UBERON:0007135!2.31e-14!57;UBERON:0002791!8.63e-14!33;UBERON:0001869!9.41e-13!32;UBERON:0002616!1.73e-12!59;UBERON:0002780!4.20e-12!41;UBERON:0001890!4.20e-12!41;UBERON:0006240!4.20e-12!41;UBERON:0003080!1.18e-11!42;UBERON:0002346!1.45e-11!90;UBERON:0001017!1.74e-11!82;UBERON:0003075!5.90e-11!86;UBERON:0007284!5.90e-11!86;UBERON:0000955!1.12e-10!69;UBERON:0006238!1.12e-10!69;UBERON:0000481!1.15e-10!347;UBERON:0005743!1.74e-10!86;UBERON:0002619!1.75e-10!22;UBERON:0001950!3.06e-10!20;UBERON:0000956!6.09e-10!25;UBERON:0000203!6.09e-10!25;UBERON:0000073!2.16e-09!94;UBERON:0001016!2.16e-09!94;UBERON:0000483!1.03e-08!309;UBERON:0000119!1.96e-08!312;UBERON:0000059!5.67e-08!11;UBERON:0001155!9.67e-08!9;UBERON:0003056!1.91e-07!61;UBERON:0000200!4.59e-07!6;UBERON:0002021!6.90e-07!5;UBERON:0000475!7.86e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.60e-23;16!UBERON:0002036;3.60e-23;16!UBERON:0002385;3.39e-22;31!UBERON:0001015;3.39e-22;31!UBERON:0000383;3.39e-22;31!UBERON:0000059;1.28e-14;11!UBERON:0001155;9.55e-13;9!UBERON:0005409;1.01e-11;22!UBERON:0004921;1.13e-11;33!UBERON:0000160;1.14e-11;17!UBERON:0001043;2.24e-07;3!UBERON:0004151;3.60e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.03e-14,11;UBERON:0002385,1.95e-13,64;UBERON:0001015,1.95e-13,64;UBERON:0000383,1.95e-13,64;UBERON:0005409,5.78e-13,25;UBERON:0001155,9.45e-13,9;UBERON:0001134,4.54e-12,62;UBERON:0002036,4.54e-12,62;UBERON:0003082,4.54e-12,62;UBERON:0000160,9.06e-12,17;UBERON:0002329,3.69e-10,71;UBERON:0003059,3.69e-10,71;UBERON:0007282,3.69e-10,71;UBERON:0004290,3.69e-10,71;UBERON:0009618,3.69e-10,71;UBERON:0003077,5.62e-10,72;UBERON:0007285,5.62e-10,72;UBERON:0007524,8.45e-10,73;UBERON:0007503,5.54e-09,78;UBERON:0004921,1.38e-08,118;UBERON:0003104,2.09e-08,160;UBERON:0009142,2.09e-08,160;UBERON:0002100,2.82e-08,199;UBERON:0000486,2.88e-08,83;UBERON:0005256,1.62e-07,122;UBERON:0001043,2.25e-07,3;UBERON:0009143,2.25e-07,3;UBERON:0004151,3.49e-07,3 | |||
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| ||
|short_description=p4@POLA2 | |short_description=p4@POLA2 | ||
}} | }} |
Latest revision as of 07:16, 19 September 2015
Short description: | p4@POLA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POLA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000534785_5end |
EntrezGene: | POLA2 |
HGNC: | 30073 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 4.19e-26 | 9 |
enteric smooth muscle cell | 2.83e-14 | 3 |
smooth muscle cell of large intestine | 2.83e-14 | 3 |
smooth muscle cell of colon | 2.83e-14 | 3 |
hepatic stem cell | 2.08e-10 | 2 |
hepatic mesenchymal stem cell | 2.08e-10 | 2 |
muscle cell | 5.10e-10 | 55 |
muscle precursor cell | 2.24e-09 | 58 |
myoblast | 2.24e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.24e-09 | 58 |
electrically responsive cell | 8.51e-09 | 61 |
electrically active cell | 8.51e-09 | 61 |
skeletal muscle satellite cell | 1.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
large intestine | 1.03e-14 | 11 |
muscle tissue | 1.95e-13 | 64 |
musculature | 1.95e-13 | 64 |
musculature of body | 1.95e-13 | 64 |
gastrointestinal system | 5.78e-13 | 25 |
colon | 9.45e-13 | 9 |
skeletal muscle tissue | 4.54e-12 | 62 |
striated muscle tissue | 4.54e-12 | 62 |
myotome | 4.54e-12 | 62 |
intestine | 9.06e-12 | 17 |
somite | 3.69e-10 | 71 |
presomitic mesoderm | 3.69e-10 | 71 |
presumptive segmental plate | 3.69e-10 | 71 |
dermomyotome | 3.69e-10 | 71 |
trunk paraxial mesoderm | 3.69e-10 | 71 |
paraxial mesoderm | 5.62e-10 | 72 |
presumptive paraxial mesoderm | 5.62e-10 | 72 |
dense mesenchyme tissue | 8.45e-10 | 73 |
epithelial vesicle | 5.54e-09 | 78 |
subdivision of digestive tract | 1.38e-08 | 118 |
mesenchyme | 2.09e-08 | 160 |
entire embryonic mesenchyme | 2.09e-08 | 160 |
trunk | 2.82e-08 | 199 |
multilaminar epithelium | 2.88e-08 | 83 |
trunk mesenchyme | 1.62e-07 | 122 |
esophagus | 2.25e-07 | 3 |
esophageal region | 2.25e-07 | 3 |
cardiac chamber | 3.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.49e-10 | 2 |