FFCP PHASE1:Hg19::chr8:80992805..80992831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7163 | |EntrezGene=7163 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12005 | |HGNC=12005 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000520741_5end | |||
|cluster_id=chr8:80992805..80992831,- | |||
|description=CAGE_peak_13_at_TPD52_5end | |||
|id=chr8:80992805..80992831,- | |||
|ontology_enrichment_celltype=CL:0000242!3.03e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.28e-18;2!CL:0000242;5.28e-18;2!CL:0000312;9.76e-08;5!CL:0000095;3.11e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.27e-18,2;CL:0000312,1.04e-07,5;CL:0000095,3.11e-07,17;CL:0000123,3.11e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.36e-09;1!UBERON:0006242;1.36e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;9.29e-10;1!DOID:326;9.29e-10;1!DOID:3978;9.29e-10;1!DOID:3394;9.29e-10;1!DOID:5844;9.29e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:178,8.17e-10,1;DOID:326,8.17e-10,1;DOID:3978,8.17e-10,1;DOID:3394,8.17e-10,1;DOID:5844,8.17e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.04e-10!35;UBERON:0001905!1.76e-10!2;UBERON:0002757!1.76e-10!2;UBERON:0010134!1.76e-10!2;UBERON:0002784!1.76e-10!2;UBERON:0005408!1.76e-10!2;UBERON:0001899!1.76e-10!2;UBERON:0000059!2.73e-10!11;UBERON:0003127!1.69e-09!2;UBERON:0000160!3.59e-09!27;UBERON:0001155!2.03e-08!9;UBERON:0002110!7.36e-07!3;UBERON:0006242!7.36e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;9.07e-35;22!UBERON:0000160;8.57e-29;17!UBERON:0004921;1.20e-20;33!UBERON:0000059;4.12e-19;11!UBERON:0001905;2.55e-18;2!UBERON:0002757;2.55e-18;2!UBERON:0010134;2.55e-18;2!UBERON:0005408;2.55e-18;2!UBERON:0001899;2.55e-18;2!UBERON:0002108;1.32e-15;4!UBERON:0001155;2.21e-15;9!UBERON:0002110;7.99e-12;3!UBERON:0003296;1.28e-09;4!UBERON:0010133;1.28e-09;4!UBERON:0002784;1.28e-09;4!UBERON:0001154;1.36e-09;1!UBERON:0001153;1.36e-09;1!UBERON:0009854;1.36e-09;1!UBERON:0001555;2.11e-08;54!UBERON:0000945;1.41e-07;5!UBERON:0010039;1.41e-07;5!UBERON:0004907;1.61e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.54e-30,25;UBERON:0000160,9.06e-29,17;UBERON:0000059,3.97e-19,11;UBERON:0001905,2.24e-18,2;UBERON:0002757,2.24e-18,2;UBERON:0010134,2.24e-18,2;UBERON:0005408,2.24e-18,2;UBERON:0001899,2.24e-18,2;UBERON:0002108,1.50e-15,4;UBERON:0001155,2.13e-15,9;UBERON:0002110,7.78e-12,3;UBERON:0006242,7.78e-12,3;UBERON:0003296,1.20e-09,4;UBERON:0010133,1.20e-09,4;UBERON:0002784,1.20e-09,4;UBERON:0001154,1.25e-09,1;UBERON:0001153,1.25e-09,1;UBERON:0001045,1.25e-09,1;UBERON:0004907,1.55e-07,5 | |||
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| ||
|short_description=p13@TPD52 | |||
}} | }} |
Latest revision as of 04:31, 19 September 2015
Short description: | p13@TPD52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TPD52_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000520741_5end |
EntrezGene: | TPD52 |
HGNC: | 12005 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.27e-18 | 2 |
keratinocyte | 1.04e-07 | 5 |
neuron associated cell | 3.11e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 3.11e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.54e-30 | 25 |
intestine | 9.06e-29 | 17 |
large intestine | 3.97e-19 | 11 |
pineal body | 2.24e-18 | 2 |
regional part of epithalamus | 2.24e-18 | 2 |
secretory circumventricular organ | 2.24e-18 | 2 |
circumventricular organ | 2.24e-18 | 2 |
epithalamus | 2.24e-18 | 2 |
small intestine | 1.50e-15 | 4 |
colon | 2.13e-15 | 9 |
gallbladder | 7.78e-12 | 3 |
gall bladder primordium | 7.78e-12 | 3 |
gland of diencephalon | 1.20e-09 | 4 |
neuroendocrine gland | 1.20e-09 | 4 |
regional part of diencephalon | 1.20e-09 | 4 |
vermiform appendix | 1.25e-09 | 1 |
caecum | 1.25e-09 | 1 |
midgut | 1.25e-09 | 1 |
lower digestive tract | 1.55e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 8.17e-10 | 1 |
ischemia | 8.17e-10 | 1 |
extrinsic cardiomyopathy | 8.17e-10 | 1 |
myocardial ischemia | 8.17e-10 | 1 |
myocardial infarction | 8.17e-10 | 1 |