FFCP PHASE1:Hg19::chr3:56502533..56502549,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:56502533..56502549,- to FFCP PHASE1:Hg19::chr3:56502533..56502549,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26059 | |EntrezGene=26059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31922 | |HGNC=31922 | ||
|TSSclassifier=strong | |||
|UniProt=O15083 | |UniProt=O15083 | ||
|association_with_transcript=-142bp_to_ENST00000288221,NM_015576,uc003dhr.1_5end | |||
|cluster_id=chr3:56502533..56502549,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_4_at_ERC2_5end | |||
|id=chr3:56502533..56502549,- | |||
|ontology_enrichment_celltype=CL:0000540!9.38e-10!6;CL:0000031!9.38e-10!6;CL:0000404!9.38e-10!6;CL:0000047!2.25e-09!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.21e-17;82!UBERON:0010122;1.03e-09;2 | |||
|ontology_enrichment_disease=DOID:3095!2.28e-07!22;DOID:2994!2.28e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.95e-68!82;UBERON:0005743!2.61e-66!86;UBERON:0000073!1.09e-64!94;UBERON:0001016!1.09e-64!94;UBERON:0001049!7.92e-63!57;UBERON:0005068!7.92e-63!57;UBERON:0006241!7.92e-63!57;UBERON:0007135!7.92e-63!57;UBERON:0000955!1.33e-52!69;UBERON:0006238!1.33e-52!69;UBERON:0002616!4.52e-52!59;UBERON:0002780!9.12e-51!41;UBERON:0001890!9.12e-51!41;UBERON:0006240!9.12e-51!41;UBERON:0003080!2.84e-49!42;UBERON:0002346!6.94e-48!90;UBERON:0002020!3.22e-47!34;UBERON:0003528!3.22e-47!34;UBERON:0003075!4.56e-47!86;UBERON:0007284!4.56e-47!86;UBERON:0001893!5.48e-47!34;UBERON:0002791!2.41e-45!33;UBERON:0001869!1.75e-44!32;UBERON:0003056!8.52e-38!61;UBERON:0002619!7.87e-36!22;UBERON:0000924!5.74e-34!173;UBERON:0006601!5.74e-34!173;UBERON:0000956!1.76e-33!25;UBERON:0000203!1.76e-33!25;UBERON:0004121!7.40e-33!169;UBERON:0001950!2.18e-32!20;UBERON:0007023!1.25e-31!115;UBERON:0000033!5.75e-30!123;UBERON:0000153!9.21e-28!129;UBERON:0007811!9.21e-28!129;UBERON:0002420!1.75e-15!9;UBERON:0007245!1.75e-15!9;UBERON:0010009!1.75e-15!9;UBERON:0010011!1.75e-15!9;UBERON:0000454!1.75e-15!9;UBERON:0002308!4.78e-15!9;UBERON:0000125!4.78e-15!9;UBERON:0000025!1.31e-14!194;UBERON:0003076!3.26e-14!15;UBERON:0003057!3.26e-14!15;UBERON:0009663!4.87e-12!7;UBERON:0001871!2.35e-11!7;UBERON:0000200!2.51e-11!6;UBERON:0004733!3.46e-10!12;UBERON:0002028!3.46e-10!12;UBERON:0007277!3.46e-10!12;UBERON:0000349!4.50e-10!5;UBERON:0002298!4.97e-10!8;UBERON:0002021!8.79e-10!5;UBERON:0004111!1.14e-09!241;UBERON:0001872!1.20e-09!5;UBERON:0004732!3.06e-09!13;UBERON:0000477!5.31e-08!286;UBERON:0000483!5.52e-08!309;UBERON:0000369!5.71e-08!4;UBERON:0002435!5.71e-08!4;UBERON:0000204!5.71e-08!4;UBERON:0010082!5.71e-08!4;UBERON:0000119!9.47e-08!312;UBERON:0000922!1.66e-07!612;UBERON:0000475!4.95e-07!365;UBERON:0000064!9.75e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.74e-90;22!UBERON:0001869;2.27e-89;32!UBERON:0003528;1.64e-87;34!UBERON:0002020;1.64e-87;34!UBERON:0002791;1.07e-83;32!UBERON:0001950;1.39e-81;20!UBERON:0001893;1.24e-80;34!UBERON:0000956;2.01e-79;25!UBERON:0000203;2.01e-79;25!UBERON:0002780;2.28e-55;41!UBERON:0001890;2.28e-55;41!UBERON:0000073;2.92e-43;53!UBERON:0002616;2.92e-43;53!UBERON:0001017;6.75e-37;75!UBERON:0000955;2.54e-33;68!UBERON:0001016;1.13e-27;83!UBERON:0000200;2.12e-26;6!UBERON:0002420;1.72e-23;9!UBERON:0007245;1.72e-23;9!UBERON:0010009;1.72e-23;9!UBERON:0010011;1.72e-23;9!UBERON:0000454;1.72e-23;9!UBERON:0001871;2.77e-23;6!UBERON:0000349;2.89e-23;5!UBERON:0000125;1.75e-22;9!UBERON:0002308;1.75e-22;9!UBERON:0002021;1.95e-22;5!UBERON:0001872;2.22e-22;5!UBERON:0000369;6.60e-18;4!UBERON:0002435;6.60e-18;4!UBERON:0000204;6.60e-18;4!UBERON:0009663;2.08e-15;7!UBERON:0001870;4.02e-14;3!UBERON:0005383;6.41e-14;3!UBERON:0005382;6.41e-14;3!UBERON:0000988;1.92e-13;3!UBERON:0011216;6.37e-12;132!UBERON:0007023;8.87e-12;114!UBERON:0002298;1.62e-11;6!UBERON:0001876;1.40e-10;2!UBERON:0001954;1.89e-10;2!UBERON:0003022;1.89e-10;2!UBERON:0002421;1.89e-10;2!UBERON:0002600;1.89e-10;2!UBERON:0002771;2.98e-10;2!UBERON:0002702;6.43e-10;2!UBERON:0001873;1.03e-09;2!UBERON:0002148;3.05e-09;2!UBERON:0006331;3.05e-09;2!UBERON:0009662;3.05e-09;2!UBERON:0004733;1.33e-08;12!UBERON:0002028;1.33e-08;12!UBERON:0004732;6.37e-08;13!UBERON:0002680;1.04e-07;9!UBERON:0001895;1.04e-07;9!UBERON:0010314;1.97e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.97e-101,34;UBERON:0002020,2.97e-101,34;UBERON:0001869,1.16e-100,32;UBERON:0001893,1.56e-94,34;UBERON:0002791,2.26e-93,32;UBERON:0002619,1.68e-90,22;UBERON:0001049,4.95e-88,56;UBERON:0005068,4.95e-88,56;UBERON:0006241,4.95e-88,56;UBERON:0007135,4.95e-88,56;UBERON:0000073,9.78e-83,53;UBERON:0002616,9.78e-83,53;UBERON:0001017,7.72e-82,81;UBERON:0001950,1.37e-81,20;UBERON:0001016,1.15e-80,89;UBERON:0000956,1.95e-79,25;UBERON:0000203,1.95e-79,25;UBERON:0002780,1.13e-77,41;UBERON:0001890,1.13e-77,41;UBERON:0003080,1.13e-77,41;UBERON:0006240,1.13e-77,41;UBERON:0000955,4.04e-75,68;UBERON:0006238,4.04e-75,68;UBERON:0003075,4.78e-58,82;UBERON:0007284,4.78e-58,82;UBERON:0002346,5.05e-55,86;UBERON:0003056,1.81e-50,61;UBERON:0010371,2.90e-44,104;UBERON:0004121,1.07e-38,171;UBERON:0000924,1.07e-38,171;UBERON:0006601,1.07e-38,171;UBERON:0007023,2.50e-37,114;UBERON:0010314,1.31e-35,132;UBERON:0011216,3.60e-31,223;UBERON:0000200,1.70e-26,6;UBERON:0002420,1.43e-23,9;UBERON:0007245,1.43e-23,9;UBERON:0010009,1.43e-23,9;UBERON:0010011,1.43e-23,9;UBERON:0000454,1.43e-23,9;UBERON:0000349,2.76e-23,5;UBERON:0001871,2.83e-23,6;UBERON:0000125,1.08e-22,9;UBERON:0002308,1.08e-22,9;UBERON:0002021,1.53e-22,5;UBERON:0001872,3.40e-22,5;UBERON:0000025,1.54e-20,192;UBERON:0000369,6.47e-18,4;UBERON:0002435,6.47e-18,4;UBERON:0000204,6.47e-18,4;UBERON:0010082,6.47e-18,4;UBERON:0009663,1.87e-15,7;UBERON:0004111,6.70e-15,240;UBERON:0001870,3.01e-14,3;UBERON:0005383,5.87e-14,3;UBERON:0005382,5.87e-14,3;UBERON:0000988,1.41e-13,3;UBERON:0003076,6.58e-13,15;UBERON:0003057,6.58e-13,15;UBERON:0002298,1.49e-11,6;UBERON:0001876,1.27e-10,2;UBERON:0001954,1.85e-10,2;UBERON:0003022,1.85e-10,2;UBERON:0002421,1.85e-10,2;UBERON:0002600,1.85e-10,2;UBERON:0002771,3.35e-10,2;UBERON:0000483,4.85e-10,306;UBERON:0002702,5.26e-10,2;UBERON:0000119,7.19e-10,309;UBERON:0001873,8.99e-10,2;UBERON:0010122,8.99e-10,2;UBERON:0002148,1.90e-09,2;UBERON:0006331,1.90e-09,2;UBERON:0009662,1.90e-09,2;UBERON:0004733,1.22e-08,12;UBERON:0002028,1.22e-08,12;UBERON:0007277,1.22e-08,12;UBERON:0004732,5.89e-08,13;UBERON:0002680,8.81e-08,9;UBERON:0001895,8.81e-08,9;UBERON:0010092,8.81e-08,9;UBERON:0000923,3.35e-07,560;UBERON:0010316,3.35e-07,560;UBERON:0005291,3.35e-07,560;UBERON:0006598,3.35e-07,560;UBERON:0010317,3.35e-07,560;UBERON:0002532,3.35e-07,560;UBERON:0002050,4.37e-07,564 | |||
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| ||
|short_description=p4@ERC2 | |||
}} | }} |
Latest revision as of 03:33, 19 September 2015
Short description: | p4@ERC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ERC2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -142bp_to_ENST00000288221, NM_015576, uc003dhr.1_5end |
EntrezGene: | ERC2 |
HGNC: | 31922 |
UniProt: | O15083 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data