FFCP PHASE1:Hg19::chr3:54157480..54157547,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:54157480..54157547,+ to FFCP PHASE1:Hg19::chr3:54157480..54157547,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55799 | |EntrezGene=55799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15460 | |HGNC=15460 | ||
|TSSclassifier=strong | |||
|UniProt=B4DSF6,Q8IZS8 | |UniProt=B4DSF6,Q8IZS8 | ||
|association_with_transcript=0bp_to_ENST00000471363,ENST00000477024,ENST00000490478,uc003dhg.1,uc003dhh.1,uc011beu.1_5end | |||
|cluster_id=chr3:54157480..54157547,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CACNA2D3_5end | |||
|id=chr3:54157480..54157547,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.95e-20;82!UBERON:0010122;5.89e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;7.13e-90;32!UBERON:0003528;1.53e-86;34!UBERON:0002020;1.53e-86;34!UBERON:0002791;2.89e-84;32!UBERON:0002619;1.11e-83;22!UBERON:0001893;1.18e-81;34!UBERON:0001950;5.06e-76;20!UBERON:0000956;2.24e-73;25!UBERON:0000203;2.24e-73;25!UBERON:0002780;3.29e-72;41!UBERON:0001890;3.29e-72;41!UBERON:0000073;1.51e-59;53!UBERON:0002616;1.51e-59;53!UBERON:0000955;1.18e-44;68!UBERON:0001017;5.56e-44;75!UBERON:0001016;2.02e-32;83!UBERON:0002420;9.10e-29;9!UBERON:0007245;9.10e-29;9!UBERON:0010009;9.10e-29;9!UBERON:0010011;9.10e-29;9!UBERON:0000454;9.10e-29;9!UBERON:0000125;4.02e-28;9!UBERON:0002308;4.02e-28;9!UBERON:0000200;9.20e-26;6!UBERON:0009663;2.07e-21;7!UBERON:0001872;2.83e-21;5!UBERON:0001871;5.25e-21;6!UBERON:0002021;5.72e-21;5!UBERON:0000349;1.10e-20;5!UBERON:0000369;4.81e-18;4!UBERON:0002435;4.81e-18;4!UBERON:0000204;4.81e-18;4!UBERON:0007023;1.02e-15;114!UBERON:0002298;1.03e-15;6!UBERON:0004733;9.20e-15;12!UBERON:0002028;9.20e-15;12!UBERON:0005383;5.24e-14;3!UBERON:0005382;5.24e-14;3!UBERON:0001870;7.36e-14;3!UBERON:0004732;1.47e-13;13!UBERON:0011216;1.40e-12;132!UBERON:0000988;3.82e-12;3!UBERON:0002680;1.44e-10;9!UBERON:0001895;1.44e-10;9!UBERON:0001873;5.89e-10;2!UBERON:0010314;7.92e-10;132!UBERON:0002771;7.96e-10;2!UBERON:0002702;8.30e-10;2!UBERON:0002784;2.48e-09;4!UBERON:0001954;3.45e-09;2!UBERON:0003022;3.45e-09;2!UBERON:0002421;3.45e-09;2!UBERON:0002600;3.45e-09;2!UBERON:0001876;3.53e-09;2!UBERON:0001894;4.18e-09;7!UBERON:0001875;8.44e-09;2!UBERON:0006514;8.44e-09;2!UBERON:0001905;1.19e-08;2!UBERON:0002757;1.19e-08;2!UBERON:0010134;1.19e-08;2!UBERON:0005408;1.19e-08;2!UBERON:0001899;1.19e-08;2!UBERON:0002148;1.83e-08;2!UBERON:0006331;1.83e-08;2!UBERON:0009662;1.83e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.98e-118,56;UBERON:0005068,1.98e-118,56;UBERON:0006241,1.98e-118,56;UBERON:0007135,1.98e-118,56;UBERON:0000073,9.94e-114,53;UBERON:0002616,9.94e-114,53;UBERON:0001869,4.09e-101,32;UBERON:0002780,4.28e-101,41;UBERON:0001890,4.28e-101,41;UBERON:0003080,4.28e-101,41;UBERON:0006240,4.28e-101,41;UBERON:0003528,6.07e-101,34;UBERON:0002020,6.07e-101,34;UBERON:0000955,5.38e-100,68;UBERON:0006238,5.38e-100,68;UBERON:0001017,1.59e-95,81;UBERON:0001893,6.32e-95,34;UBERON:0002791,6.27e-94,32;UBERON:0001016,2.80e-85,89;UBERON:0002619,1.14e-83,22;UBERON:0003075,1.57e-78,82;UBERON:0007284,1.57e-78,82;UBERON:0001950,5.07e-76,20;UBERON:0002346,1.66e-74,86;UBERON:0000956,2.28e-73,25;UBERON:0000203,2.28e-73,25;UBERON:0003056,6.19e-66,61;UBERON:0010371,3.45e-60,104;UBERON:0007023,4.93e-52,114;UBERON:0010314,9.70e-51,132;UBERON:0004121,1.06e-40,171;UBERON:0000924,1.06e-40,171;UBERON:0006601,1.06e-40,171;UBERON:0011216,2.67e-32,223;UBERON:0000025,2.81e-30,192;UBERON:0002420,8.46e-29,9;UBERON:0007245,8.46e-29,9;UBERON:0010009,8.46e-29,9;UBERON:0010011,8.46e-29,9;UBERON:0000454,8.46e-29,9;UBERON:0000125,3.74e-28,9;UBERON:0002308,3.74e-28,9;UBERON:0000200,9.02e-26,6;UBERON:0004111,2.10e-22,240;UBERON:0009663,1.93e-21,7;UBERON:0001872,3.14e-21,5;UBERON:0001871,4.82e-21,6;UBERON:0002021,5.60e-21,5;UBERON:0000349,1.13e-20,5;UBERON:0003076,4.88e-19,15;UBERON:0003057,4.88e-19,15;UBERON:0000369,4.71e-18,4;UBERON:0002435,4.71e-18,4;UBERON:0000204,4.71e-18,4;UBERON:0010082,4.71e-18,4;UBERON:0002298,1.00e-15,6;UBERON:0000483,1.38e-15,306;UBERON:0000119,2.40e-15,309;UBERON:0004733,9.00e-15,12;UBERON:0002028,9.00e-15,12;UBERON:0007277,9.00e-15,12;UBERON:0005383,5.13e-14,3;UBERON:0005382,5.13e-14,3;UBERON:0001870,8.19e-14,3;UBERON:0004732,1.44e-13,13;UBERON:0000988,3.67e-12,3;UBERON:0002680,1.41e-10,9;UBERON:0001895,1.41e-10,9;UBERON:0010092,1.41e-10,9;UBERON:0001873,6.02e-10,2;UBERON:0010122,6.02e-10,2;UBERON:0002771,7.79e-10,2;UBERON:0002702,8.48e-10,2;UBERON:0002784,2.79e-09,4;UBERON:0001876,3.53e-09,2;UBERON:0001954,3.53e-09,2;UBERON:0003022,3.53e-09,2;UBERON:0002421,3.53e-09,2;UBERON:0002600,3.53e-09,2;UBERON:0001894,4.47e-09,7;UBERON:0006222,4.47e-09,7;UBERON:0001875,7.95e-09,2;UBERON:0006514,7.95e-09,2;UBERON:0001905,1.44e-08,2;UBERON:0002757,1.44e-08,2;UBERON:0010134,1.44e-08,2;UBERON:0005408,1.44e-08,2;UBERON:0001899,1.44e-08,2;UBERON:0002148,1.83e-08,2;UBERON:0006331,1.83e-08,2;UBERON:0009662,1.83e-08,2;UBERON:0000923,9.08e-08,560;UBERON:0010316,9.08e-08,560;UBERON:0005291,9.08e-08,560;UBERON:0006598,9.08e-08,560;UBERON:0010317,9.08e-08,560;UBERON:0002532,9.08e-08,560;UBERON:0002050,1.21e-07,564;UBERON:0005423,4.01e-07,581;UBERON:0000922,8.38e-07,592 | |||
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| ||
|short_description=p2@CACNA2D3 | |||
}} | }} |
Latest revision as of 02:13, 19 September 2015
Short description: | p2@CACNA2D3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CACNA2D3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000471363, ENST00000477024, ENST00000490478, uc003dhg.1, uc003dhh.1, uc011beu.1_5end |
EntrezGene: | CACNA2D3 |
HGNC: | 15460 |
UniProt: | B4DSF6Q8IZS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data